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1.
Sci Rep ; 14(1): 21035, 2024 09 09.
Article in English | MEDLINE | ID: mdl-39251865

ABSTRACT

Human noroviruses (HuNoVs) are a leading cause of acute viral gastroenteritis worldwide. Infectious outbreaks due to recombinant NoV genotype called GII.P16-GII.2 have been frequently reported since 2016. In this study, we expressed the major capsid protein VP1 from three GII.2 NoV strains using the recombinant baculovirus expression system. The assembly, histo-blood group antigen (HBGA)-binding patterns, and cross-blocking abilities of VP1 proteins were investigated. All the three NoV VP1 proteins successfully assembled into virus-like particles (VLPs). The HBGA-binding assay demonstrated a temporal binding pattern. The latest isolate bound to saliva samples of all blood types. Sequence alignment suggested that the observed gain in HBGA-binding ability was attributed to a limited number of amino acid mutations. Using chimeric VP1 proteins, we demonstrated that synergistic effects resulted in enhanced binding ability. Bile salts increased GII.2 VLP avidity for HBGAs except GII.2-2011/M1. In vitro blockade assay of salivary HBGA-VLP binding demonstrated the presence of cross-blocking effects among different strains. This study provides insight into the evolutionary binding characteristics and cross-blocking effects of GII.2 NoVs to facilitate the development of measures to control this type of viruses.


Subject(s)
Blood Group Antigens , Capsid Proteins , Norovirus , Norovirus/genetics , Norovirus/metabolism , Capsid Proteins/genetics , Capsid Proteins/metabolism , Capsid Proteins/immunology , Humans , Blood Group Antigens/metabolism , Caliciviridae Infections/virology , Caliciviridae Infections/immunology , Protein Binding , Genotype , Saliva/virology , Gastroenteritis/virology , Amino Acid Sequence
2.
Cell Host Microbe ; 32(9): 1457-1459, 2024 Sep 11.
Article in English | MEDLINE | ID: mdl-39265530

ABSTRACT

Breastfeeding provides infection protection for several pathogens but not for noroviruses. Mechanisms explaining this discrepancy have been unclear. In this issue of Cell Host & Microbe, Peiper et al. demonstrate that while breastmilk protects mice from intestinal damage, it promotes neonatal murine norovirus infection due to maternal-derived bile acids.1.


Subject(s)
Bile Acids and Salts , Caliciviridae Infections , Milk, Human , Norovirus , Animals , Bile Acids and Salts/metabolism , Caliciviridae Infections/virology , Mice , Milk, Human/virology , Milk, Human/chemistry , Humans , Female , Breast Feeding , Gastroenteritis/virology
3.
Virol J ; 21(1): 232, 2024 Sep 27.
Article in English | MEDLINE | ID: mdl-39334155

ABSTRACT

The norovirus (NoV) genome is diverse. Therefore, this study explored the epidemiological characteristics and genetic features of NoV in Ningxia Hui Autonomous Region, China, from 2011 to 2022 to clarify the genetic diversity in this region. Stool samples were screened for NoV and then sequenced and genotyped. In total, 1,788 of 13,083 specimens were NoV -positive (13.67%); 204 (1.56%) and 1,584 (12.11%) cases were GI and GII, respectively. Additionally, 559 were NoV infection with other viruses (4.27%), primarily with rotavirus (277/559, 49.55%). The NoV incidence rate was the highest among children aged 0-2 years (18.09%, 1054/5,828) and lowest among adults aged 45-64 years (110/1,495, 7.36%); it was also higher in the winter and spring than in the other seasons. GI.3[P3] was the dominant GI genotype. The dominant GII genotype changed roughly every two years. In the GII group, GII.4 was the most common genotype (46.79%), followed by GII.3 (21.34%), GII.2 (12.34%), and GII.17 (9.77%). There were three variants of GII.4 Den Haag, GII.4 New Orleans and GII.4 Sydney identified in the detected GII.4 strains, with GII.4 Sydney dominating. The GII.4 (87.36%), GII.3 (86.35%), and GII.2 (72.92%) strains were primarily detected in children, whereas it was the GII.17 (52.63%) strain in adults. Overall, the NoV genotypes in the Ningxia Hui Autonomous Region were diverse. Primarily, GII groups were dominant, but this changed over time.


Subject(s)
Caliciviridae Infections , Feces , Gastroenteritis , Genetic Variation , Genotype , Norovirus , Phylogeny , Seasons , Humans , China/epidemiology , Norovirus/genetics , Norovirus/classification , Norovirus/isolation & purification , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology , Child, Preschool , Infant , Child , Adult , Middle Aged , Prevalence , Young Adult , Adolescent , Feces/virology , Male , Infant, Newborn , Female , Gastroenteritis/virology , Gastroenteritis/epidemiology , Aged , RNA, Viral/genetics , Aged, 80 and over
4.
Viruses ; 16(9)2024 Sep 07.
Article in English | MEDLINE | ID: mdl-39339908

ABSTRACT

For nearly twenty years, gnotobiotic (Gn) pigs have been used as a model of human norovirus (HuNoV) infection and disease. Unique in their ability to develop diarrhea and shed virus post oral challenge, Gn pigs have since been used to evaluate the infectivity of several genogroup II HuNoV strains. Nearly all major pandemic GII.4 variants have been tested in Gn pigs, with varying rates of infectivity. Some induce an asymptomatic state despite being shed in large quantities in stool, and others induce high incidence of both diarrhea and virus shedding. Non-GII.4 strains, including GII.12 and GII.6, have also been evaluated in Gn pigs. Again, rates of diarrhea and virus shedding tend to vary between studies. Several factors may influence these findings, including age, dosage, biological host factors, or bacterial presence. The impact of these factors is nuanced and requires further evaluation to elucidate the exact mechanisms behind increases or decreases in infection rates. Regardless, the value of Gn pig models in HuNoV research cannot be understated, and the model will surely continue to contribute to the field in years to come.


Subject(s)
Caliciviridae Infections , Diarrhea , Disease Models, Animal , Germ-Free Life , Norovirus , Virus Shedding , Animals , Norovirus/genetics , Norovirus/pathogenicity , Norovirus/physiology , Norovirus/classification , Swine , Caliciviridae Infections/virology , Caliciviridae Infections/veterinary , Diarrhea/virology , Diarrhea/veterinary , Humans , Feces/virology , Genotype
5.
ACS Appl Mater Interfaces ; 16(38): 51397-51410, 2024 Sep 25.
Article in English | MEDLINE | ID: mdl-39263982

ABSTRACT

Norovirus (NoV) is the predominant cause of foodborne illness globally; current detection methods are typically expensive, have inadequate sensitivities, and utilize biological receptors with poor stability. Therefore, accurate, cost-effective, and highly stable detection methods are needed to screen for NoV in foods. We developed molecularly imprinted polymer nanoparticles (nanoMIPs) to detect NoV using a small target epitope (12 amino acids) with a solid-phase synthesis approach. The performance of three batches of nanoMIPs with varying monomer compositions (nanoMIP-1, -2, and -3) were compared both experimentally and computationally. Surface plasmon resonance examined nanoMIP binding affinity to norovirus virus-like particles (NoV-LPs), whereby nanoMIP-1 had the lowest KD value of 0.512 µM. This is significant, as traditional targets for generation of norovirus ligands previously reported were generated against drastically larger norovirus capsid segments that have limitations in ease of production. Further, an electrochemical sensor was developed by covalently attaching the nanoMIPs to glassy carbon electrodes. In agreement with our predictions from density functional theory simulations, electrochemical impedance spectroscopy showed a sensitive response toward NoV-LPs for nanoMIP batches tested; however, nanoMIP-1 was optimal, with an excellent detection limit of 3.4 pg/mL (1.9 × 105 particles/mL). Due to its exceptional performance, nanoMIP-1 was immobilized to screen-printed electrodes and utilized within a thermal sensor, where it exhibited a low detection limit of 6.5 pg/mL (3.7 × 105 particles/mL). Crucially, we demonstrated that nanoMIP-1 could detect NoV in real food samples (romaine lettuce) by using electrochemical and thermal sensors. Consequently, the study highlights the exceptional potential of nanoMIPs to replace traditional biological materials (e.g., antibodies) as sensitive, versatile, and highly stable receptors within NoV sensors.


Subject(s)
Molecularly Imprinted Polymers , Nanoparticles , Norovirus , Norovirus/isolation & purification , Nanoparticles/chemistry , Humans , Molecularly Imprinted Polymers/chemistry , Electrochemical Techniques/methods , Molecular Imprinting/methods , Limit of Detection
6.
J Gen Virol ; 105(9)2024 Sep.
Article in English | MEDLINE | ID: mdl-39331030

ABSTRACT

Human noroviruses are the most common cause of viral gastroenteritis, resulting annually in 219 000 deaths and a societal cost of $60 billion, and no antivirals or vaccines are available. The minor capsid protein may play a significant role in the evolution of norovirus. GII.4 is the predominant genotype of norovirus, and its VP2 undergoes epochal co-evolution with the major capsid protein VP1. Since the sudden emergence of norovirus GII.2[P16] in 2016, it has consistently remained a significant epidemic strain in recent years. In the construction of phylogenetic trees, the phylogenetic trees of VP2 closely parallel those of VP1 due to the shared tree topology of both proteins. To investigate the interaction patterns between the major and minor capsid proteins of norovirus GII.2, we chose five representative strains of GII.2 norovirus and investigated their evolutionary patterns using a yeast two-hybrid experiment. Our study shows VP1-VP2 interaction in GII.2, with critical interaction sites at 167-178 and 184-186 in the highly variable region. In the intra-within GII.2, we observed no temporal co-evolution between VP1 and VP2 of GII.2. Notable distinctions were observed in the interaction intensity of VP2 among inter-genotype (P<0.05), highlighting the divergent evolutionary patterns of VP2 within different norovirus genotypes. In summary, the interactions between VP2 and VP1 of GII.2 norovirus exhibit out-of-sync evolutionary patterns. This study offered valuable insights for further understanding and completing the evolutionary mechanism of norovirus.


Subject(s)
Capsid Proteins , Evolution, Molecular , Norovirus , Phylogeny , Norovirus/genetics , Norovirus/classification , Capsid Proteins/genetics , Capsid Proteins/metabolism , Humans , Caliciviridae Infections/virology , Genotype , Two-Hybrid System Techniques , Protein Binding , Gastroenteritis/virology
7.
Sci Rep ; 14(1): 22240, 2024 09 27.
Article in English | MEDLINE | ID: mdl-39333786

ABSTRACT

This study aims to determine the presence of norovirus, severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), and bocavirus in air samples from a tertiary care hospital in Bangkok, Thailand. Air samples were collected in water using the BioSampler and concentrated using speedVac centrifugation. Based on RT-qPCR, norovirus RNA and SARS-CoV-2 RNA were detected in 13/60 (21.7%) and 3/60 (5.0%) of samples, respectively. One air sample had a weak positivity for both norovirus and SARS-CoV-2 RNAs. Detection rate of norovirus genogroup (G) II (13.3%) was higher than norovirus GI (6.7%). One air sample (1.7%) tested positive for GI and GII. The norovirus GI RNA concentration was 6.0 × 102 genome copies/m3. The norovirus GII RNA concentrations ranged from 3.4 × 101 to 5.0 × 103 genome copies/m3. Based on RT-nested PCR, norovirus GII was detected in two (3.3%) samples. All samples tested negative for GI RNA and bocavirus DNA. By phylogenetic analysis, GII.17, which is closely related to the outbreak Kawasaki308/JPN/2015 strain, was found in the RT-nested PCR-positive samples. This study highlights the potential of aerosols for norovirus and SARS-CoV-2 transmission and probably cause gastrointestinal and respiratory illnesses, respectively.


Subject(s)
COVID-19 , Norovirus , RNA, Viral , SARS-CoV-2 , Tertiary Care Centers , Norovirus/genetics , Norovirus/isolation & purification , Thailand/epidemiology , Humans , SARS-CoV-2/genetics , SARS-CoV-2/isolation & purification , RNA, Viral/genetics , COVID-19/virology , COVID-19/epidemiology , COVID-19/transmission , Air Microbiology , Bocavirus/genetics , Bocavirus/isolation & purification , Bocavirus/classification , Human bocavirus/genetics , Human bocavirus/isolation & purification , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology
8.
BMC Infect Dis ; 24(1): 1053, 2024 Sep 27.
Article in English | MEDLINE | ID: mdl-39333942

ABSTRACT

BACKGROUND: Noroviruses (NoVs) are the leading cause of diarrheal disease among all age groups worldwide, with an increased burden in developing countries. As there is no surveillance, epidemiological data is limited in Ethiopia. Hence, this study aimed to investigate the prevalence and associated factors of NoV infection among patients with diarrhea in the Amhara National Regional State, Ethiopia. METHODS: A prospective health facility-based cross-sectional study was conducted from May 2021 to November 2021. A total of 550 study participants of all age groups with symptoms of diarrhea were proportionately assigned to the four study areas, area with three health facilities. Study participants were systematically sampled in each health facility. A fecal sample from each case was collected. The RNA was extracted and tested for NoV by one-step RT-PCR. Sociodemographic and other variables were gathered using a pre-tested questionnaire. A descriptive analysis was performed. Both binary and multiple logistic regressions were utilized to identify factors associated with NoV infection. Variables with a p-value < 0.05 in the final model were considered statistically significant. RESULTS: Five hundred nineteen out of 550 samples were analyzed (94.4% response rate). The overall prevalence of NoV was 8.9% (46/519). The positivity rates were higher among the elderly (33.3%) and under-5 children (12.5%). Both genogroup I and genogroup II (GII) were identified, with GII being the predominant, at 82.6% (38/46). Of all participants, only 20% reported a history of vomiting. Norovirus infection was more prevalent among participants from Debre Tabor (AOR = 4, 95%CI: 1.2-14) and Bahir Dar areas (AOR = 3.6, 95%CI: 1.04-11) compared to Debre Markos. Additionally, older adults (AOR = 7, 95% CI: 2-24) and under-5 children (AOR = 3.5, 95% CI: 2.8-12) were disproportionately affected compared to adults. The previous history of diarrhea (AOR = 3.6, 95% CI: 1.7-7) was a significant factor contributing to NoV infections. Moreover, the odds of NoV infection were higher among individuals with a high frequency of diarrhea (AOR = 15.3, 95%CI: 7.6-43) and vomiting (AOR = 3.5, 95%CI: 1.5-8). CONCLUSIONS: The prevalence of NoV was considerably high, with the predominance of NoV-GII. The positivity rate was higher among the extreme age groups and varied across the study areas. To obtain a comprehensive understanding of the virus`s epidemiology and its genetic diversity, further research is warranted.


Subject(s)
Caliciviridae Infections , Diarrhea , Norovirus , Humans , Ethiopia/epidemiology , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology , Female , Diarrhea/epidemiology , Diarrhea/virology , Male , Prevalence , Norovirus/genetics , Norovirus/isolation & purification , Cross-Sectional Studies , Child, Preschool , Adult , Adolescent , Child , Young Adult , Middle Aged , Infant , Prospective Studies , Feces/virology , Risk Factors , Gastroenteritis/epidemiology , Gastroenteritis/virology , Aged
9.
PLoS Pathog ; 20(9): e1012480, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39226332

ABSTRACT

Norovirus infection is characterised by a rapid onset of disease and the development of debilitating symptoms including projectile vomiting and diffuse diarrhoea. Vaccines and antivirals are sorely lacking and developments in these areas are hampered by the lack of an adequate cell culture system to investigate human norovirus replication and pathogenesis. Herein, we describe how the model norovirus, Mouse norovirus (MNV), produces a viral protein, NS3, with the functional capacity to attenuate host protein translation which invokes the activation of cell death via apoptosis. We show that this function of NS3 is conserved between human and mouse viruses and map the protein domain attributable to this function. Our study highlights a critical viral protein that mediates crucial activities during replication, potentially identifying NS3 as a worthy target for antiviral drug development.


Subject(s)
Caliciviridae Infections , Macrophages , Norovirus , Norovirus/physiology , Animals , Mice , Caliciviridae Infections/virology , Macrophages/virology , Macrophages/metabolism , Humans , Protein Biosynthesis , Virus Replication/physiology , Cell Death/physiology , Viral Nonstructural Proteins/metabolism , Viral Nonstructural Proteins/genetics , Apoptosis
10.
Food Res Int ; 194: 114877, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39232515

ABSTRACT

Human norovirus (HuNoV), the leading cause of foodborne acute gastroenteritis, poses a serious threat to public health. Traditional disinfection methods lead to destructions of food properties and functions, and/or environmental contaminations. Green and efficient approaches are urgently needed to disinfect HuNoV. Plasma-activated water (PAW) containing amounts of reactive species is an emerging nonthermal and eco-friendly disinfectant towards the pathogenic microorganisms. However, the disinfection efficacy and mechanism of PAW on HuNoV has not yet been studied. Murine norovirus 1 (MNV-1) is one of the most commonly used HuNoV surrogates to evaluate the efficacy of disinfectants. In the current study, the inactivation efficacy of MNV-1 by PAW was investigated. The results demonstrated that PAW significantly inactivated MNV-1, reducing the viral titer from approximately 6 log10 TCID50/mL to non-detectable level. The decreased pH, increased oxidation-reduction potential (ORP) and conductivity of PAW were observed compared with that of deionized water. Compositional analysis revealed that hydrogen peroxide (H2O2), nitrate (NO3-) and hydroxyl radical (OH) were the functional reactive species in MNV-1 inactivation. L-histidine could scavenge most of the inactivation effect in a concentration-dependent manner. Moreover, PAW could induce damage to viral proteins. Part of MNV-1 particles was destroyed, while others were structurally intact without infectiousness. After 45 days of storage at 4 °C, PAW generated with 80 % O2 and 100 % O2 could still reduce over 4 log10 TCID50/mL of the viral titer. In addition, PAW prepared using hard water induced approximately 6 log10 TCID50/mL reduction of MNV-1. PAW treatment of MNV-1-inoculated blueberries reduced the viral titer from 3.79 log10 TCID50/mL to non-detectable level. Together, findings of the current study uncovered the crucial reactive species in PAW inactivate MNV-1 and provided a potential disinfection strategy to combat HuNoV in foods, water, and environment.


Subject(s)
Disinfectants , Disinfection , Hydrogen Peroxide , Norovirus , Virus Inactivation , Water , Norovirus/drug effects , Norovirus/physiology , Virus Inactivation/drug effects , Animals , Mice , Water/chemistry , Disinfectants/pharmacology , Disinfection/methods , Plasma Gases/pharmacology , Hydroxyl Radical/metabolism , Nitrates/pharmacology , Hydrogen-Ion Concentration
11.
Hum Vaccin Immunother ; 20(1): 2396707, 2024 Dec 31.
Article in English | MEDLINE | ID: mdl-39248509

ABSTRACT

Evidence on unnecessary antibiotic use in children with acute viral gastroenteritis (AGE) is scarce. We characterized the extent and correlates of antibiotic use among children hospitalized with viral AGE. A single-center study enrolled children aged 0-59 months hospitalized for AGE between 2008 and 2015 in Israel. Information was collected on laboratory tests, diagnoses, antibiotic treatment, and rotavirus vaccination. Stool samples were tested for rotavirus antigen, GII-norovirus, and stool cultures were performed for bacterial enteropathogens. Data from 2240 children were analyzed. Rotavirus vaccine was given to 79% of eligible children. Rotavirus test was performed on 1419 (63.3%) children. Before the introduction of universal rotavirus vaccination (2008-2010), rotavirus positivity in stool samples was 37.0%, which declined to 17.3% during the universal vaccination years (2011-2015). Overall, 1395 participants had viral AGE. Of those, 253 (18.1% [95% CI 16.1-20.2]) had unnecessary antibiotic treatment, mostly penicillin 46.6%, ceftriaxone 34.0% and azithromycin 21.7%. A multivariable analysis showed an inverse association between rotavirus vaccination and unnecessary antibiotic treatment (odds ratio = 0.53 [95% CI 0.31-0.91]), while positive associations were found with performing chest-X-ray test (3.00 [1.73-5.23]), blood (3.29 [95% CI 1.85-5.86]) and urine cultures (7.12 [3.77-13.43]), levels of C-reactive protein (1.02 [1.01-1.02]) and leukocytes (1.05 [1.01-1.09]). The results were consistent in an analysis of children with laboratory-confirmed rotavirus or norovirus AGE, or after excluding children with CRP > 50 mg/L. In conclusion, antibiotic prescription was common among hospitalized children with viral AGE, which was inversely related to rotavirus vaccination, possibly due to less severe illness in the vaccinated children.


Subject(s)
Anti-Bacterial Agents , Gastroenteritis , Hospitalization , Rotavirus Infections , Rotavirus Vaccines , Humans , Gastroenteritis/virology , Gastroenteritis/prevention & control , Gastroenteritis/drug therapy , Infant , Rotavirus Vaccines/administration & dosage , Rotavirus Vaccines/immunology , Child, Preschool , Male , Female , Anti-Bacterial Agents/therapeutic use , Rotavirus Infections/prevention & control , Hospitalization/statistics & numerical data , Israel/epidemiology , Infant, Newborn , Feces/virology , Feces/microbiology , Rotavirus/immunology , Rotavirus/isolation & purification , Vaccination/statistics & numerical data , Norovirus/immunology
12.
Curr Opin Infect Dis ; 37(5): 385-391, 2024 Oct 01.
Article in English | MEDLINE | ID: mdl-39253867

ABSTRACT

PURPOSE OF REVIEW: Viruses are the most common etiological agents of diarrhea in children. Despite rotavirus vaccine introduction, rotavirus remains as the leading cause of death globally, followed by norovirus, which represents a diagnostic challenge. Here, we describe new advances in the diagnosis and management of viral diarrheas. RECENT FINDINGS: Although immunoassays are widely used for their fast turnaround time and low cost, molecular techniques have become the most reliable diagnostic method due to their high sensitivity and capacity to analyze multiple pathogens in gastrointestinal panels. Isothermal nucleic acid amplification assays (LAMP and RPA) are promising techniques since they do not require sophisticated equipment and can be used as point-of-care testing. CRISPR/Cas nucleic acid detection systems are new diagnostic methods with great potential. Several recent published articles describe the role of human intestinal enteroids to characterize norovirus infection, to test new drugs, and for vaccine development. The interaction between the human gut microbiota and gastrointestinal viral infections has been extensively reviewed and offers some innovative mechanisms for therapeutic and preventive measures. SUMMARY: Although important advances have been made, more research is needed to address remaining challenges and further improve diagnostic capabilities and better management strategies for this critical infectious disease.


Subject(s)
Diarrhea , Humans , Diarrhea/diagnosis , Diarrhea/virology , Diarrhea/therapy , Molecular Diagnostic Techniques/methods , Virus Diseases/diagnosis , Virus Diseases/therapy , Norovirus/genetics , Norovirus/isolation & purification , Caliciviridae Infections/diagnosis , Caliciviridae Infections/therapy , Nucleic Acid Amplification Techniques/methods , Gastrointestinal Microbiome
13.
Arch Virol ; 169(10): 201, 2024 Sep 18.
Article in English | MEDLINE | ID: mdl-39292300

ABSTRACT

Feline norovirus (FNoV) is a potential pathogen of feline gastroenteritis and has two genogroups (GIV and GVI). Few epidemiological studies have been conducted on FNoV. We designed two enzyme-linked immunosorbent assays (ELISAs) to identify genogroup-specific FNoV antibodies for serological surveillance. Analysis of sera from cats experimentally infected with FNoV GIV or GVI and from specific-pathogen-free (SPF) cats confirmed that the two recombinant proteins used in the assay react in a genogroup-specific manner. Of the 183 samples tested, 6.6% were positive for GIV and 26.2% were positive for GVI. Antibodies to both FNoV genogroups were detected in sera collected in 2005, seven years before FNoV was first reported.


Subject(s)
Antibodies, Viral , Caliciviridae Infections , Cat Diseases , Enzyme-Linked Immunosorbent Assay , Gastroenteritis , Animals , Cats , Caliciviridae Infections/veterinary , Caliciviridae Infections/virology , Caliciviridae Infections/diagnosis , Caliciviridae Infections/immunology , Enzyme-Linked Immunosorbent Assay/methods , Antibodies, Viral/blood , Antibodies, Viral/immunology , Cat Diseases/virology , Cat Diseases/diagnosis , Cat Diseases/immunology , Gastroenteritis/virology , Gastroenteritis/veterinary , Gastroenteritis/diagnosis , Gastroenteritis/immunology , Calicivirus, Feline/immunology , Calicivirus, Feline/genetics , Calicivirus, Feline/isolation & purification , Capsid Proteins/immunology , Capsid Proteins/genetics , Genotype , Norovirus/immunology , Norovirus/genetics , Norovirus/classification , Norovirus/isolation & purification
14.
Arch Virol ; 169(10): 209, 2024 Sep 27.
Article in English | MEDLINE | ID: mdl-39327326

ABSTRACT

Noroviruses are the most common cause of acute gastroenteritis (AGE) outbreaks in childcare centers and kindergartens. Their high transmissibility is partly due to their genetic diversity. AGE outbreaks that occurred in Seoul childcare centers and kindergartens from 2019 to 2022 were investigated, and 68 epidemiological reports prepared by public health centers in Seoul were used for data collection. In the three quarters of 2022, there were 40 outbreaks of AGE in Seoul childcare centers and kindergartens, which exceeded the 35 total outbreaks that occurred during the previous three years. The proportion of childcare centers and kindergartens with AGE outbreaks among all facilities in Seoul increased from 12.6% in 2019 to 58.8% in 2022. Noroviruses were the most common pathogens responsible for AGE outbreaks in these cases. From 2019 to 2021, norovirus GII.2 was the predominant genotype, and GII.4 was detected in about 25% of cases. However, in 2022, GII.4 became predominant and was detected in about 79% of cases. The attack rate and infection source of AGE outbreaks from 2019 to 2021 were not significantly different from those in 2022. In conclusion, the number of AGE outbreaks in Seoul childcare centers and kindergartens increased significantly, primarily because of increased norovirus GII.4 transmission in 2022.


Subject(s)
Caliciviridae Infections , Child Day Care Centers , Disease Outbreaks , Gastroenteritis , Genotype , Norovirus , Norovirus/genetics , Norovirus/classification , Norovirus/isolation & purification , Gastroenteritis/epidemiology , Gastroenteritis/virology , Humans , Caliciviridae Infections/epidemiology , Caliciviridae Infections/transmission , Caliciviridae Infections/virology , Child, Preschool , Child , Infant , Seoul/epidemiology
15.
Euro Surveill ; 29(39)2024 Sep.
Article in English | MEDLINE | ID: mdl-39328162

ABSTRACT

We report an increase in GII.17 norovirus outbreaks and sporadic infections of acute gastroenteritis in Austria, Germany, France, Ireland, the Netherlands, England and the United States during the 2023/24 season. A decrease in GII.4 coincided with GII.17 prevalence increasing to between 17% and 64% of all GII detections. Overall, 84% of the GII.17 strains clustered closely with strains first reported in Romania in 2021 and two new sub-lineages were identified. Norovirus surveillance and molecular characterisation should be prioritised this winter.


Subject(s)
Caliciviridae Infections , Disease Outbreaks , Gastroenteritis , Norovirus , Norovirus/genetics , Norovirus/isolation & purification , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology , Humans , Gastroenteritis/epidemiology , Gastroenteritis/virology , United States/epidemiology , Europe/epidemiology , Genotype , Phylogeny , Prevalence , RNA, Viral/genetics , Seasons , Feces/virology , Population Surveillance
16.
Biosci Rep ; 44(9)2024 Sep 25.
Article in English | MEDLINE | ID: mdl-39158037

ABSTRACT

Norovirus (NoV) is the main pathogen that causes acute gastroenteritis and brings a heavy socio-economic burden worldwide. In this study, five polysaccharide fractions, labeled pSFP-1-5, were isolated and purified from Sargassum fusiforme (S. fusiforme). In vitro experiments demonstrated that pSFP-5 significantly prevented the binding of type A, B and H histo-blood group antigens (HBGAs) to NoV GII.4 virus-like particles (NoV GII.4 VLPs). In addition, in vivo experiments revealed that pSFP-5 was effective in reducing the accumulation of NoV in oysters, indicating that pSFP-5 could reduce the risk of NoV infection from oyster consumption. The results of transmission electron microscopy showed that the appearance of NoV GII.4 VLPs changed after pSFP-5 treatment, indicating that pSFP-5 may achieve antiviral ability by altering the morphological structure of the viral particles so that they could not bind to HBGAs. The results of the present study indicate that pSFP-5 may be an effective anti-NoV substance and can be used as a potential anti-NoV drug component.


Subject(s)
Blood Group Antigens , Caliciviridae Infections , Norovirus , Polysaccharides , Sargassum , Norovirus/drug effects , Sargassum/chemistry , Polysaccharides/pharmacology , Polysaccharides/chemistry , Polysaccharides/metabolism , Animals , Blood Group Antigens/metabolism , Caliciviridae Infections/virology , Caliciviridae Infections/drug therapy , Humans , Gastroenteritis/virology , Gastroenteritis/drug therapy , Antiviral Agents/pharmacology , Antiviral Agents/chemistry , Ostreidae/virology , Virion/metabolism , Virion/ultrastructure , Virion/drug effects , Edible Seaweeds
17.
Cell Host Microbe ; 32(9): 1488-1501.e5, 2024 Sep 11.
Article in English | MEDLINE | ID: mdl-39214086

ABSTRACT

The pathogenic outcome of enteric virus infections is governed by a complex interplay between the virus, intestinal microbiota, and host immune factors, with metabolites serving as a key mediator. Noroviruses bind bile acid metabolites, which are produced by the host and then modified by commensal bacteria. Paradoxically, bile acids can have both proviral and antiviral roles during norovirus infections. Working in an infant mouse model of norovirus infection, we demonstrate that microbiota and their bile acid metabolites protect from norovirus diarrhea, whereas host bile acids promote disease. We also find that maternal bile acid metabolism determines the susceptibility of newborn mice to norovirus diarrhea during breastfeeding. Finally, targeting maternal and neonatal bile acid metabolism can protect newborn mice from norovirus disease. In summary, neonatal metabolic immaturity and breastmilk bile acids are central determinants of heightened newborn vulnerability to norovirus disease.


Subject(s)
Animals, Newborn , Bile Acids and Salts , Caliciviridae Infections , Diarrhea , Disease Models, Animal , Gastrointestinal Microbiome , Milk, Human , Norovirus , Animals , Mice , Bile Acids and Salts/metabolism , Caliciviridae Infections/metabolism , Caliciviridae Infections/virology , Milk, Human/virology , Milk, Human/metabolism , Diarrhea/virology , Diarrhea/metabolism , Female , Humans , Mice, Inbred C57BL
18.
Talanta ; 280: 126725, 2024 Dec 01.
Article in English | MEDLINE | ID: mdl-39167939

ABSTRACT

Human norovirus (HuNoV) is a leading cause of foodborne diseases worldwide, making rapid and accurate detection crucial for prevention and control. In recent years, the CRISPR/Cas13a system, known for its single-base resolution in RNA recognition and unique collateral cleavage activity, is particularly suitable for sensitive and rapid RNA detection. However, isothermal amplification-based CRISPR/Cas13 assays often require an external transcription step, complicating the detection process. In our study, an efficient diagnostic technique based on the NASBA/Cas13a system was established to identify conserved regions at the ORF1-ORF2 junction of norovirus. The RNA amplification techniques [Nucleic Acid Sequence-Based Amplification (NASBA)] integrates reverse transcription and transcription steps, enabling sensitive, accurate, and rapid enrichment of low-abundance RNA. Furthermore, the CRISPR/Cas13a system provides secondary precise recognition of the amplified products, generating a fluorescence signal through its activated accessory collateral cleavage activity. We optimized the reaction kinetics parameters of Cas13a and achieved a detection limit as low as 51pM. The conditions for the cascade reaction involving CRISPR analysis and RNA amplification were optimized. Finally, we validated the reliability and accuracy of the NASBA/Cas13a method by detecting norovirus in shellfish, achieving results comparable to qRT-PCR in a shorter time and detecting viral loads as low as 10 copies/µL.


Subject(s)
CRISPR-Cas Systems , Norovirus , RNA, Viral , Norovirus/genetics , Norovirus/isolation & purification , CRISPR-Cas Systems/genetics , RNA, Viral/genetics , RNA, Viral/analysis , Humans , Self-Sustained Sequence Replication/methods , Limit of Detection , Nucleic Acid Amplification Techniques/methods
19.
J Environ Manage ; 368: 122122, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39168003

ABSTRACT

Biomonitoring appears to be a key approach to assess chemical or microbiological contaminations. The freshwater mussel, Dreissena polymorpha (D. polymorpha), is a suitable tool already used to monitor chemical and, more recently, microbiological pollution. In the present study, we used this sentinel species to monitor viral contamination of fecal origin over a wide geographical distribution. An active approach was implemented based on caging of calibrated and pathogen-free organisms with the same exposure conditions, allowing spatio-temporal comparisons between different water bodies. In addition, different types of sites were selected to investigate the range of environmental concentrations that D. polymorpha are able to translate. Different viral genome targets were measured: norovirus genogroup I and II (NoV GI and GII) and F-specific RNA bacteriophages belonging to the genogroup -I and -II (FRNAPH-I and -II). Total infectious FRNAPH were also monitored. D. polymorpha was able to translate a wide range of concentrations for all the viral targets studied, meaning that this sentinel species can be used for both low and highly anthropised sites. Moreover, D. polymorpha caging proved effective in achieving gradients of viral contamination of fecal origin pressure and to highlight the contribution of tributaries to the main rivers. D. polymorpha provided spatial and temporal variations of the viral contamination. It allowed to highlight the prevalence of the FRNAPH-I and -II genogroups according to the caging site. FRNAPH-II was found to be dominant in urban areas and FRNAPH-I in rural areas. This strategy uses the caging of the sentinel species D. polymorpha on selected sites with standardised analysis methods has proven to be a promising tool for characterizing viral contamination at both large and very fine scales.


Subject(s)
Dreissena , Environmental Monitoring , Feces , Feces/virology , Animals , Environmental Monitoring/methods , Dreissena/virology , Norovirus/isolation & purification , Norovirus/genetics
20.
Water Res ; 263: 122152, 2024 Oct 01.
Article in English | MEDLINE | ID: mdl-39096810

ABSTRACT

Wastewater-based epidemiology (WBE) gained widespread use as a tool for supporting clinical disease surveillance during the COVID-19 pandemic. There is now significant interest in the continued development of WBE for other pathogens of clinical significance. In this study, approximately 3,200 samples of wastewater from across England, previously collected for quantification of SARS-CoV-2, were re-analysed for the quantification of norovirus genogroup I (GI) and II (GII). Overall, GI and GII were detected in 93% and 98% of samples respectively, and at least one of the genogroups was detected in 99% of samples. GI was found at significantly lower concentrations than GII, but the proportion of each genogroup varied over time, with GI becoming more prevalent than GII in some areas towards the end of the study period (May 2021 - March 2022). Using relative strength indices (RSI), it was possible to study the trends of each genogroup, and total norovirus over time. Increases in norovirus levels appeared to coincide with the removal of COVID-19 related lockdown restrictions within England. Local Moran's I analyses indicated several localised outbreaks of both GI and GII across England, notably the possible GI outbreak in the north of England in early 2022. Comparisons of national average norovirus concentrations in wastewater against concomitant norovirus reported case numbers showed a significant linear relationship. This highlights the potential for wastewater-based monitoring of norovirus as a valuable approach to support surveillance of norovirus in communities.


Subject(s)
Norovirus , Wastewater , Norovirus/isolation & purification , Norovirus/genetics , Wastewater/virology , England/epidemiology , Humans , COVID-19/epidemiology , COVID-19/virology , SARS-CoV-2 , Wastewater-Based Epidemiological Monitoring , Caliciviridae Infections/epidemiology , Caliciviridae Infections/virology
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