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1.
Trop Biomed ; 41(1): 97-108, 2024 Mar 01.
Article in English | MEDLINE | ID: mdl-38852139

ABSTRACT

Streptococcus suis is a bacterium of clinical importance in diverse animal hosts including companion animals and humans. Companion animals are closely associated in the living environment of humans and are potential reservoirs for zoonotic pathogens. Given the zoonotic potential of S. suis, it is crucial to determine whether this bacterium is present among the companion animal population. This study aimed to detect Streptococcus suis in companion animals namely cats and dogs of the central west coast of Peninsular Malaysia and further characterize the positive isolates via molecular and genomic approach. The detection of S. suis was done via bacterial isolation and polymerase chain reaction assay of gdh and recN gene from oral swabs. Characterization was done by multiplex PCR serotyping, as well as muti-locus sequence typing, AMR gene prediction, MGE identification and phylogenomic analysis on whole genome sequence acquired from Illumina and Oxford Nanopore sequencing. Among the 115 samples, PCR assay detected 2/59 of the cats were positive for S. suis serotype 8 while all screened dog samples were negative. This study further described the first complete whole genome of S. suis strain SS/UPM/MY/F001 isolated from the oral cavity of a companion cat. Genomic analysis revealed a novel strain of S. suis having a unique MLST profile and antimicrobial resistance genes of mefA, msrD, patA, patB and vanY. Mobile genetic elements were described, and pathogenic determinants matched to human and swine strains were identified. Phylogenetic tree analysis on the core genome alignment revealed strain SS/UPM/MY/F001 was distinct from other S. suis strains. This study provided insight into the detection and genomic features of the S. suis isolate of a companion cat and highlighted its potential for antimicrobial resistance and pathogenicity.


Subject(s)
Cat Diseases , Dog Diseases , Phylogeny , Streptococcal Infections , Streptococcus suis , Whole Genome Sequencing , Cats , Animals , Streptococcus suis/genetics , Streptococcus suis/isolation & purification , Streptococcal Infections/veterinary , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Cat Diseases/microbiology , Dogs , Dog Diseases/microbiology , Malaysia , Pets/microbiology , Drug Resistance, Bacterial/genetics , Zoonoses/microbiology , Zoonoses/transmission , Multilocus Sequence Typing , Genome, Bacterial , Anti-Bacterial Agents/pharmacology , Humans , Bacterial Zoonoses/microbiology , Bacterial Zoonoses/transmission
2.
Microbiol Spectr ; 12(7): e0426523, 2024 Jul 02.
Article in English | MEDLINE | ID: mdl-38785764

ABSTRACT

The disease burden of Streptococcus pyogenes is particularly high in low- and middle-income countries. However, data on the molecular epidemiology of S. pyogenes in such regions, especially sub-Saharan Africa, are scarce. To address this, whole-genome sequencing (WGS) of S. pyogenes from Gabon was performed to identify transmission clusters and provide valuable genomic data for public repositories. A total of 76 S. pyogenes isolates from 73 patients, collected between September 2012 and January 2013, were characterized by short-read whole-genome sequencing. The predominant emm types were emm58.0, emm81.2 and emm223.0 with 9.2% (7 of 76), 7.9% (6 of 76), and 6.6% (5 of 76), respectively. Single-nucleotide polymorphism analysis revealed 16 putative transmission clusters. Four of these were household transmissions. Four antimicrobial genes (lmrP, tetM, tetL, and thfT) were found in the S. pyogenes isolates from this study. All strains carried lmrP. Of the 76 isolates, 64 (84.2%) carried at least one tetracycline resistance gene (tetM or tetL). Comparisons with other publicly available African genomic data revealed a significant correlation between geographical location and genetic diversity of S. pyogenes, with Gabonese strains showing similarities to those from Kenya and certain Oceanian regions. Our study showed that transmission of S. pyogenes can occur at the community/household level and that high-resolution molecular typing is needed to monitor changes in circulating clones and to detect community outbreaks. Advocacy for the adoption of WGS for comprehensive molecular characterization of S. pyogenes and data sharing through public repositories should be encouraged to understand the molecular epidemiology and evolutionary trajectory of S. pyogenes in sub-Saharan Africa. IMPORTANCE: The study conducted in Gabon underscores the critical importance of addressing the limited knowledge of the molecular epidemiology of Streptococcus pyogenes in low- and middle-income countries, particularly sub-Saharan Africa. Our molecular analysis identified predominant emm types and unveiled 16 putative transmission clusters, four involving household transmissions. Furthermore, the study revealed a correlation between geographical location and genetic diversity, emphasizing the necessity for a comprehensive understanding of the molecular epidemiology and evolutionary trajectory of S. pyogenes in various regions. The call for advocacy in adopting whole-genome sequencing for molecular characterization and data sharing through public repositories is crucial for advancing our knowledge and implementing effective strategies to combat the spread of S. pyogenes in sub-Saharan Africa.


Subject(s)
Molecular Epidemiology , Pharynx , Streptococcal Infections , Streptococcus pyogenes , Whole Genome Sequencing , Humans , Streptococcus pyogenes/genetics , Streptococcus pyogenes/isolation & purification , Streptococcus pyogenes/classification , Gabon/epidemiology , Pharynx/microbiology , Streptococcal Infections/microbiology , Streptococcal Infections/epidemiology , Streptococcal Infections/transmission , Child , Child, Preschool , Adolescent , Male , Female , Adult , Polymorphism, Single Nucleotide , Young Adult , Skin/microbiology , Infant , Genome, Bacterial , Middle Aged , Genomics , Aged
3.
Lancet Microbe ; 5(7): 679-688, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38735305

ABSTRACT

BACKGROUND: Streptococcus pyogenes causes more than 500 000 deaths per year globally, which occur disproportionately in low-income and middle-income countries. The roles of S pyogenes skin and pharyngeal carriage in transmission are unclear. We aimed to investigate the clinical epidemiology and household transmission dynamics of both S pyogenes asymptomatic carriage and infection in a high-burden setting. METHODS: We did a 1-year prospective, longitudinal, household cohort study, recruiting healthy participants from households in Sukuta, The Gambia. Households were eligible if they comprised at least three members, including one child younger than 18 years, and were excluded if more than half of household members declined to participate. Households were identified by random GPS coordinates derived from census data. At monthly visits, pharyngeal and normal skin swabs were collected for S pyogenes culture, and sociodemographic data were recorded by interview. Incident pharyngitis and pyoderma infections were captured. Cultured isolates underwent emm genotyping. The primary outcome measures were incidence of S pyogenes carriage and disease. Additional outcomes were prevalence of S pyogenes skin and pharyngeal carriage, S pyogenes skin and pharyngeal clearance time, S pyogenes emm type, risk factors for carriage and disease events, household secondary attack rate, and emm-linked household transmission events. The study is registered on ClinicalTrials.gov, NCT05117528. FINDINGS: Between July 27, 2021, and Sept 28, 2022, 442 participants were enrolled from 44 households. The median age was 15 years (IQR 6-28) and 233 (53%) were female. We identified 17 pharyngitis and 99 pyoderma events and 49 pharyngeal and 39 skin S pyogenes carriage acquisition events. Mean monthly prevalence was 1·4% (95% CI 1·1-1·9) for S pyogenes pharyngeal carriage and 1·2% (0·9-1·6) for S pyogenes skin carriage. Incidence was 120 per 1000 person-years (95% CI 87-166) for S pyogenes pharyngeal carriage, 124 per 1000 person-years (90-170) for S pyogenes skin carriage, 51 per 1000 person-years (31-84) for S pyogenes pharyngitis, and 263 per 1000 person-years (212-327) for S pyogenes pyoderma. Pharyngeal carriage risk was higher during the rainy season (HR 5·67, 95% CI 2·19-14·69) and in larger households (per additional person: 1·03, 1·00-1·05), as was pharyngitis risk (rainy season: 3·00, 1·10-8·22; household size: 1·04, 1·02-1·07). Skin carriage risk was not affected by season or household size, but was lower in female than in male participants (0·45, 0·22-0·92) and highest in children younger than 5 years compared with adults (22·69, 3·08-167·21), with similar findings for pyoderma (female sex: 0·34, 0·19-0·61; age <5 years: 7·00, 2·78-17·64). Median clearance time after carriage acquisition was 4·0 days for both skin (IQR 3·5-7·0) and pharynx (3·5-7·3). The mean household secondary attack rate was 4·9 (95% CI 3·5-6·3) for epidemiologically linked S pyogenes events and 0·74 (0·3-1·2) for emm-linked S pyogenes events. Of the 204 carriage and disease events, emm types were available for 179 (88%). Only 18 emm-linked between-visit household transmission events were identified. Pyoderma was the most common source of S pyogenes household transmissions in 11 (61%) of 18 emm-linked transmissions. Both pharynx to skin and skin to pharynx transmission events were observed. INTERPRETATION: S pyogenes carriage and infection are common in The Gambia, particularly in children. Most events are non-household acquisitions, but skin carriage and pyoderma have an important role in S pyogenes household transmission and bidirectional transmission between skin and pharynx occurs. FUNDING: Wellcome Trust, Chadwick Trust, Fonds National de la Recherche Scientifique (Belgium), European Society for Paediatric Infectious Diseases, and Medical Research Council (UK).


Subject(s)
Carrier State , Family Characteristics , Pharynx , Streptococcal Infections , Streptococcus pyogenes , Humans , Streptococcus pyogenes/isolation & purification , Gambia/epidemiology , Female , Longitudinal Studies , Male , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Carrier State/epidemiology , Carrier State/microbiology , Child , Adult , Adolescent , Prospective Studies , Young Adult , Child, Preschool , Pharynx/microbiology , Prevalence , Incidence , Risk Factors , Pharyngitis/microbiology , Pharyngitis/epidemiology , Skin/microbiology , Cohort Studies , Pyoderma/epidemiology , Pyoderma/microbiology , Middle Aged , Infant
4.
Prev Vet Med ; 228: 106230, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38772119

ABSTRACT

Strangles, a disease caused by infection with Streptococccus equi subspecies equi (S. equi), is endemic worldwide and one of the most frequently diagnosed infectious diseases of horses. Recent work has improved our knowledge of key parameters of transmission dynamics, but important knowledge gaps remain. Our aim was to apply mathematical modelling of S. equi transmission dynamics to prioritise future research areas, and add precision to estimates of transmission parameters thereby improving understanding of S. equi epidemiology and quantifying the control effort required. A compartmental deterministic model was constructed. Parameter values were estimated from current literature wherever possible. We assessed the sensitivity of estimates for the basic reproduction number on the population scale to varying assumptions for the unknown or uncertain parameters of: (mean) duration of carriership (1∕γC), relative infectiousness of carriers (f), proportion of infections that result in carriership (p), and (mean) duration of immunity after natural infection (1∕γR). Available incidence and (sero-)prevalence data were compared to model outputs to improve point estimates and ranges for these currently unknown or uncertain transmission-related parameters. The required vaccination coverage of an ideal vaccine to prevent major outbreaks under a range of control scenarios was estimated, and compared available data on existing vaccines. The relative infectiousness of carriers (as compared to acutely ill horses) and the duration of carriership were identified as key knowledge gaps. Deterministic compartmental simulations, combined with seroprevalence data, suggest that 0.05

Subject(s)
Horse Diseases , Streptococcal Infections , Animals , Horses , Streptococcal Infections/veterinary , Streptococcal Infections/epidemiology , Streptococcal Infections/transmission , Horse Diseases/transmission , Horse Diseases/epidemiology , Horse Diseases/microbiology , Models, Theoretical , Prevalence , Incidence , Streptococcus equi , Models, Biological , Streptococcus
5.
Emerg Infect Dis ; 30(6): 1228-1231, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38782033
6.
Acta Paediatr ; 113(7): 1694-1700, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38578153

ABSTRACT

AIM: To compare the prophylactic efficacy of ampicillin and clindamycin against vertical transmission of group B Streptococcus from mothers to their infants by evaluating the rates of group B Streptococcus colonisation. METHODS: We retrospectively extracted data for mothers who delivered at Showa University Northern Yokohama Hospital between 1 October 2017 and 31 March 2021 and tested positive for antepartum group B Streptococcus, and their infants. The chi-square test was used to compare the rates of group B Streptococcus colonisation, sepsis, and meningitis. We conducted a multivariate logistic regression analysis, including the time interval between membrane rupture and delivery, chorioamnionitis, and maternal intrapartum fever (≥38.0°C). RESULTS: Two hundred fifty-nine mothers and their infants were eligible. Ampicillin and clindamycin were administered to 150 and 109 mothers, respectively. In the ampicillin and clindamycin groups, 12.0% (18/150) and 37.6% (41/109) infants were group B Streptococcus positive, respectively. The rate of group B Streptococcus colonisation among infants was significantly lower in the ampicillin group (p < 0.001). Multivariate regression analysis showed similar results (p < 0.001). No sepsis or meningitis cases were observed in either group. CONCLUSION: Prophylactic efficacy of clindamycin against the vertical transmission of group B Streptococcus is lower than that of ampicillin.


Subject(s)
Ampicillin , Anti-Bacterial Agents , Clindamycin , Infectious Disease Transmission, Vertical , Streptococcal Infections , Streptococcus agalactiae , Humans , Ampicillin/therapeutic use , Clindamycin/therapeutic use , Female , Infectious Disease Transmission, Vertical/prevention & control , Retrospective Studies , Streptococcal Infections/prevention & control , Streptococcal Infections/transmission , Pregnancy , Anti-Bacterial Agents/therapeutic use , Infant, Newborn , Adult , Antibiotic Prophylaxis/methods , Pregnancy Complications, Infectious/prevention & control , Pregnancy Complications, Infectious/drug therapy
7.
Nat Commun ; 15(1): 3477, 2024 Apr 24.
Article in English | MEDLINE | ID: mdl-38658529

ABSTRACT

Streptococcus dysgalactiae subspecies equisimilis (SDSE) and Streptococcus pyogenes share skin and throat niches with extensive genomic homology and horizontal gene transfer (HGT) possibly underlying shared disease phenotypes. It is unknown if cross-species transmission interaction occurs. Here, we conduct a genomic analysis of a longitudinal household survey in remote Australian First Nations communities for patterns of cross-species transmission interaction and HGT. Collected from 4547 person-consultations, we analyse 294 SDSE and 315 S. pyogenes genomes. We find SDSE and S. pyogenes transmission intersects extensively among households and show that patterns of co-occurrence and transmission links are consistent with independent transmission without inter-species interference. We identify at least one of three near-identical cross-species mobile genetic elements (MGEs) carrying antimicrobial resistance or streptodornase virulence genes in 55 (19%) SDSE and 23 (7%) S. pyogenes isolates. These findings demonstrate co-circulation of both pathogens and HGT in communities with a high burden of streptococcal disease, supporting a need to integrate SDSE and S. pyogenes surveillance and control efforts.


Subject(s)
Gene Transfer, Horizontal , Interspersed Repetitive Sequences , Streptococcal Infections , Streptococcus pyogenes , Streptococcus , Streptococcus pyogenes/genetics , Streptococcus pyogenes/isolation & purification , Streptococcus pyogenes/classification , Streptococcal Infections/transmission , Streptococcal Infections/microbiology , Humans , Streptococcus/genetics , Streptococcus/isolation & purification , Interspersed Repetitive Sequences/genetics , Australia , Genome, Bacterial/genetics , Female , Male , Child , Family Characteristics , Adult , Child, Preschool , Adolescent , Longitudinal Studies , Drug Resistance, Bacterial/genetics , Young Adult
8.
Emerg Infect Dis ; 29(8): 1627-1629, 2023 08.
Article in English | MEDLINE | ID: mdl-37486205

ABSTRACT

Streptococcus agalactiae (group B Streptococcus) sequence type 283 bacteremia, found almost exclusively in Southeast Asia, is associated with consuming raw freshwater fish, but some patients deny consumption. We detected fecal carriage in 5/184 (2.7%) persons in northeast Thailand. Human carriers might contribute to transmission or be the original source of this sequence type.


Subject(s)
Feces , Streptococcal Infections , Streptococcus agalactiae , Animals , Humans , Asia, Southeastern , Fishes/metabolism , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Streptococcus agalactiae/genetics , Streptococcus agalactiae/isolation & purification , Thailand/epidemiology , Feces/microbiology , Prevalence , Disease Transmission, Infectious/statistics & numerical data
9.
Infect Immun ; 90(1): e0042321, 2022 01 25.
Article in English | MEDLINE | ID: mdl-34662211

ABSTRACT

To understand protective immune responses against the onset of group A Streptococcus respiratory infection, we investigated whether MyD88 KO mice were susceptible to acute infection through transmission. After commingling with mice that had intranasal group A Streptococcus (GAS) inoculation, MyD88-/- recipient mice had increased GAS loads in the nasal cavity and throat that reached a mean throat colonization of 6.3 × 106 CFU/swab and mean GAS load of 5.2 × 108 CFU in the nasal cavity on day 7. Beyond day 7, MyD88-/- recipient mice became moribund, with mean 1.6 × 107 CFU/swab and 2.5 × 109 CFU GAS in the throat and nasal cavity, respectively. Systemic GAS infection occurred a couple of days after the upper respiratory infection. GAS infects the lip, the gingival sulcus of the incisor teeth, and the lamina propria of the turbinate but not the nasal cavity and nasopharyngeal tract epithelia, and C57BL/6J recipient mice had no or low levels of GAS in the nasal cavity and throat. Direct nasal GAS inoculation of MyD88-/- mice caused GAS infection, mainly in the lamina propria of the turbinate. In contrast, C57BL/6J mice with GAS inoculation had GAS bacteria in the nasal cavity but not in the lamina propria of the turbinates. Thus, MyD88-/- mice are highly susceptible to acute and lethal GAS infection through transmission, and MyD88 signaling is critical for protection of the respiratory tract lamina propria but not nasal and nasopharyngeal epithelia against GAS infection.


Subject(s)
Epithelium/microbiology , Host-Pathogen Interactions , Myeloid Differentiation Factor 88/deficiency , Respiratory Mucosa/microbiology , Respiratory Tract Infections/etiology , Streptococcal Infections/etiology , Streptococcal Infections/transmission , Streptococcus pyogenes/physiology , Animals , Biopsy , Disease Susceptibility , Epithelium/pathology , Genetic Predisposition to Disease , Immunohistochemistry , Mice , Mice, Knockout , Neutrophil Infiltration , Organ Specificity , Respiratory Mucosa/pathology , Respiratory Tract Infections/pathology , Streptococcal Infections/pathology
10.
Braz J Microbiol ; 52(4): 2007-2012, 2021 Dec.
Article in English | MEDLINE | ID: mdl-34559387

ABSTRACT

Streptococcus suis (S. suis) is a zoonotic pathogen that primarily inhabits the upper respiratory tract of pigs. Therefore, pigs that carry these pathogens are the major source of infection. Most patients are infected through contact with live pigs or unprocessed pork products and eating uncooked pork. S. Suis mainly causes sepsis and meningitis. The disease has an insidious onset and rapid progress. The patient becomes critically ill and the mortality is high. In this case report, we described a rare case of S. suis isolated from a middle-aged woman in Jinhua City, Zhejiang Province, China, who did not have any contact with live pigs and had not eaten uncooked pork. S. Suis was isolated from both the patient's blood and cerebrospinal fluid samples.


Subject(s)
Meningitis , Sepsis , Streptococcal Infections , Animals , China , Humans , Meningitis/diagnosis , Meningitis/etiology , Meningitis/microbiology , Middle Aged , Pork Meat , Sepsis/diagnosis , Sepsis/etiology , Sepsis/microbiology , Streptococcal Infections/cerebrospinal fluid , Streptococcal Infections/complications , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Streptococcus suis/genetics , Swine
11.
Medicine (Baltimore) ; 100(25): e26387, 2021 Jun 25.
Article in English | MEDLINE | ID: mdl-34160417

ABSTRACT

RATIONALE: Group B Streptococcus (GBS) remains a principal pathogen causing neonatal sepsis and meningitis, particularly in premature infants with relatively insufficient immunity. Recurrence may occur uncommonly, largely associated with subclinical mucosal persistence or repetitive exposure to exogenous sources. White matter injury (WMI) including cystic periventricular leukomalacia (PVL) has been associated with intrauterine infection/inflammation, and neonatal infection as a more significant predictor including postnatal sepsis and recurrent infection, even without microbial neuroinvasion. Furthermore, clinical and experimental evidence of WMI by some bacteria other than GBS without central nervous system invasion has been reported. However, there is little evidence of WMI associated with neonatal GBS sepsis in the absence of meningitis in the literature. PATIENT CONCERNS: A newborn at 30+4 weeks' gestation with low birthweight presented with 2 episodes (with a 13-day interval with no antibiotic therapy) of neonatal sepsis culture-proven for GBS with early-onset presentation after clinical chorioamnionitis via vertical GBS transmission and the associated conditions including prematurity-related neonatal immunodeficiency and persistent mucosal GBS carriage after the first antibiotic treatment. The perinatal GBS infection was complicated by progressive WMI presenting with ventriculomegaly and cystic PVL without a definite evidence of meningitis, intraventricular hemorrhage, and documented cerebral hypoxia or hypoperfusion conditions including septic shock. DIAGNOSES: Recurrent group B streptococcal sepsis and cystic PVL with ventriculomegaly. INTERVENTIONS: Two episodes of GBS sepsis were treated with 15-day parenteral antibiotic therapy, respectively. OUTCOMES: Resolution of the recurrent GBS sepsis without further relapses, however, complicated by WMI and subsequent about 6 months delay in motor development at 12 months' corrected age. LESSONS: This case suggests WMI associated with GBS bacteremia without central nervous system entry by viable GBS and also shows that in premature infants, intrauterine GBS infection with no interventions may lead to extensive and persistent GBS colonization, early-onset and recurrent GBS disease, and WMI. Postnatal as well as intrauterine infection/inflammation controls with maternal prophylaxis may be pivotal for prevention and limiting the magnitude of neurologic injury.


Subject(s)
Leukomalacia, Periventricular/microbiology , Neonatal Sepsis/microbiology , Pregnancy Complications, Infectious/microbiology , Streptococcal Infections/complications , Streptococcus agalactiae/isolation & purification , Administration, Intravenous , Anti-Bacterial Agents/administration & dosage , Chorioamnionitis/diagnosis , Chorioamnionitis/microbiology , Developmental Disabilities/diagnosis , Developmental Disabilities/microbiology , Drug Therapy, Combination/methods , Female , Humans , Hydrocephalus/diagnosis , Hydrocephalus/microbiology , Infant , Infant, Low Birth Weight , Infant, Newborn , Infant, Premature , Infectious Disease Transmission, Vertical , Leukomalacia, Periventricular/diagnosis , Leukomalacia, Periventricular/pathology , Magnetic Resonance Imaging , Male , Maternal Age , Neonatal Sepsis/diagnosis , Neonatal Sepsis/therapy , Pregnancy , Pregnancy Complications, Infectious/diagnosis , Recurrence , Streptococcal Infections/diagnosis , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , White Matter/diagnostic imaging , White Matter/microbiology , White Matter/pathology , Young Adult
14.
J Med Microbiol ; 70(3)2021 Mar.
Article in English | MEDLINE | ID: mdl-33750514

ABSTRACT

Bacteria of the genus Streptococcus, earlier considered typically animal, currently have also been causing infections in humans. It is necessary to make clinicians aware of the emergence of new species that may cause the development of human diseases. There is an increasing frequency of isolation of streptococci such as S. suis, S. dysgalactiae, S. iniae and S. equi from people. Isolation of Streptococcus bovis/Streptococcus equinus complex bacteria has also been reported. The streptococcal species described in this review are gaining new properties and virulence factors by which they can thrive in new environments. It shows the potential of these bacteria to changes in the genome and the settlement of new hosts. Information is presented on clinical cases that concern streptococcus species belonging to the groups Bovis, Pyogenic and Suis. We also present the antibiotic resistance profiles of these bacteria. The emerging resistance to ß-lactams has been reported. In this review, the classification, clinical characteristics and antibiotic resistance of groups and species of streptococci considered as animal pathogens are summarized.


Subject(s)
Drug Resistance, Bacterial , Streptococcal Infections/microbiology , Streptococcus/physiology , Streptococcus/pathogenicity , Zoonoses/microbiology , Animals , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/therapeutic use , Humans , Streptococcal Infections/drug therapy , Streptococcal Infections/transmission , Streptococcus/classification , Streptococcus/drug effects , Virulence , Zoonoses/drug therapy , Zoonoses/transmission
15.
Microb Genom ; 7(3)2021 03.
Article in English | MEDLINE | ID: mdl-33684029

ABSTRACT

The equine disease strangles, which is characterized by the formation of abscesses in the lymph nodes of the head and neck, is one of the most frequently diagnosed infectious diseases of horses around the world. The causal agent, Streptococcus equi subspecies equi, establishes a persistent infection in approximately 10 % of animals that recover from the acute disease. Such 'carrier' animals appear healthy and are rarely identified during routine veterinary examinations pre-purchase or transit, but can transmit S. equi to naïve animals initiating new episodes of disease. Here, we report the analysis and visualization of phylogenomic and epidemiological data for 670 isolates of S. equi recovered from 19 different countries using a new core-genome multilocus sequence typing (cgMLST) web bioresource. Genetic relationships among all 670 S. equi isolates were determined at high resolution, revealing national and international transmission events that drive this endemic disease in horse populations throughout the world. Our data argue for the recognition of the international importance of strangles by the Office International des Épizooties to highlight the health, welfare and economic cost of this disease. The Pathogenwatch cgMLST web bioresource described herein is available for tailored genomic analysis of populations of S. equi and its close relative S. equi subspecies zooepidemicus that are recovered from horses and other animals, including humans, throughout the world. This article contains data hosted by Microreact.


Subject(s)
Horse Diseases/microbiology , Horse Diseases/transmission , Streptococcal Infections/veterinary , Streptococcus equi/isolation & purification , Animals , Female , Genome, Bacterial , Horses , Male , Phylogeny , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Streptococcus equi/classification , Streptococcus equi/genetics , Streptococcus equi/physiology
16.
Sex Transm Infect ; 97(2): 118, 2021 03.
Article in English | MEDLINE | ID: mdl-33328193

ABSTRACT

We report a five-time recurrent pharyngotonsillitis caused by group A streptococcus (GAS) after sexual contacts and had no recurrence after concurrent therapy to both partners. Although Streptococcus pyogenes (GAS) is a Gram-positive streptococcus capable of causing a recurrent pharyngotonsillitis, the recurrent GAS pharyngotonsillitis as STI has not been published.A 30-year-old man had a high fever and sore throat. He had a repeated pharyngotonsillitis caused by GAS in spite of the sufficient antimicrobial therapy after having sex with his partner, including oral penile and oral vaginal sex. In contrast, a hug and kiss alone did not precede his episodes of pharyngotonsillitis. His partner had GAS carriage on her pharynx. He had no recurrence after concurrent therapy to both partners. The recurrent GAS pharyngotonsillitis as STI has not been published. In a patient with recurrent pharyngotonsillitis caused by GAS, the sexual history and pharyngeal carrier status of the partner should be checked.


Subject(s)
Pharyngitis/microbiology , Sexually Transmitted Diseases/microbiology , Streptococcal Infections/microbiology , Streptococcus pyogenes/pathogenicity , Adult , Anti-Bacterial Agents/therapeutic use , Carrier State/drug therapy , Carrier State/microbiology , Female , Humans , Male , Pharyngitis/diagnosis , Pharyngitis/drug therapy , Pharynx/microbiology , Recurrence , Sexual Behavior , Sexually Transmitted Diseases/diagnosis , Sexually Transmitted Diseases/drug therapy , Sexually Transmitted Diseases/transmission , Streptococcal Infections/diagnosis , Streptococcal Infections/drug therapy , Streptococcal Infections/transmission , Streptococcus pyogenes/isolation & purification , Treatment Outcome
17.
J Obstet Gynaecol ; 41(4): 569-572, 2021 May.
Article in English | MEDLINE | ID: mdl-32799726

ABSTRACT

Antimicrobial prophylaxis is widely recommended for pregnant women who have preterm premature rupture of the membranes. Erythromycin prophylaxis was used during an initial period (control) and then changed to intravenous amoxicillin for 48 h, followed by 5 days of oral amoxicillin along with a single dose of azithromycin (case). Healthcare records were reviewed retrospectively. The primary outcome was latency (between membrane rupture and delivery) and the secondary outcomes were mode of delivery, maternal high dependency unit (HDU) admission, and several laboratory parameters. There were 78 women in the case group (amoxicillin and azithromycin) and controls were selected on a 1:1 ratio. There was no statistically significant difference between cases and controls with respect to group B Streptococcus or E.coli carriage, previous preterm birth, assissted fertility and parity. No babies had a positive blood culture with Group B Streptococcus. There was a longer latency to delivery for those prescribed amoxicillin and azithromycin (median = 5.5 days), compared with controls on erythromycin (median = 2 days, p < .001). There was no difference in the mode of delivery or maternal HDU admission. Given the potential sequelae of preterm birth, this warrants further prospective investigation in a randomised control trial.IMPACT STATEMENTWhat is already known on this subject? Antimicrobial prophylaxis is recommended for women who have preterm premature rupture of the membranes (PPROM). It has been shown to increase latency of delivery. However there are different regimens recommended in North America (amoxicillin and a macrolide) and the United Kingdom (macrolide monotherapy).What do the results of this study add? This study has shown that in our population, women who were prescribed the PPROM regimen of amoxicillin with azithromycin had a longer median latency from time of rupture of membranes to delivery, than women in a historical control group who were prescribed erythromycin monotherapy.What are the implications of these findings for clinical practice and/or further research? This retrospective study has shown that there may be a difference in latency between different antimicrobial prophylaxis regimens for PPROM. A randomised control trial, with sufficient patient numbers, is needed to determine the best regimen for prophylaxis, and would allow harmonisation of international guidelines.


Subject(s)
Antibiotic Prophylaxis/methods , Fetal Membranes, Premature Rupture/microbiology , Infectious Disease Transmission, Vertical/prevention & control , Pregnancy Complications, Infectious/drug therapy , Streptococcal Infections/transmission , Adult , Amoxicillin/administration & dosage , Azithromycin/administration & dosage , Delivery, Obstetric/statistics & numerical data , Erythromycin/administration & dosage , Female , Humans , Infant, Newborn , Male , Pregnancy , Pregnancy Complications, Infectious/microbiology , Retrospective Studies , Streptococcus agalactiae , Time Factors , Treatment Outcome
18.
Avian Dis ; 64(3): 343-346, 2020 09 01.
Article in English | MEDLINE | ID: mdl-33205184

ABSTRACT

Major disease outbreaks caused by Streptococcus equi subsp. zooepidemicus seldom are reported in poultry. Besides acute septicemia, infection can result in a subacute or chronic form of disease with described mortality rates of 11% to 80%. Previously, the source of infection in poultry was linked to horses in which this bacterium can be present as an opportunistic pathogen on mucus membranes. The main route of spreading and being maintained within a poultry flock, after entering the stable, however, remains unclear. This case report describes an outbreak associated with S. zooepidemicus affecting a flock of 28 500 layer hens housed in an aviary system with free range. Besides sudden deaths, clinical signs of depression were noticed. Between 44 and 61 wk of age a total mortality of 23% was observed. Egg production dropped from 92% to 83%. Bacterial titration revealed substantial numbers of S. zooepidemicus present in the ceca of a healthy chicken. This novel finding hypothesizes that transmission of the infection within the flock might occur through the fecal route.


Subject(s)
Chickens , Disease Outbreaks/veterinary , Poultry Diseases/epidemiology , Streptococcal Infections/veterinary , Streptococcus/isolation & purification , Animals , Belgium/epidemiology , Feces/microbiology , Female , Poultry Diseases/microbiology , Poultry Diseases/transmission , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Streptococcal Infections/transmission
19.
Ann Clin Microbiol Antimicrob ; 19(1): 55, 2020 Nov 26.
Article in English | MEDLINE | ID: mdl-33243275

ABSTRACT

BACKGROUND: Group B Streptococcus (GBS) infections caused by Streptococcus agalactiae is a leading cause of meningitis and sepsis in neonates, with early-onset GBS symptoms emerging during the first week of life and late-onset occurring thereafter. Perinatal transmission of GBS to the neonate through the birth canal is the main factor associated with early-onset neonate infections, while less is understood about the source of late-onset infections. METHODS: In this report we describe a case of twin ex-premature infants who presented one month after birth with GBS septicemia. The mother had been appropriately screened at gestational age 35-37 weeks and laboratory methods failed to detect GBS colonization by culture or clinical molecular methods. In attempts to identify and isolate the source of GBS infection, additional surveillance swabs were collected from the mother at the time of neonate admission. Culture and a commercially available, FDA-cleared molecular PCR assay were performed. RESULTS: No GBS was detected from swabs collected from the perianal, thigh/groin or axillary areas. However, expressed breast milk and swabs from the breastmilk pump were positive by both methods. Since simultaneous culture and molecular methods which used breastmilk as a source were performed, investigators ascertained the limit of detection for GBS in breastmilk. The limit of detection was determined to be tenfold lower than that of LIM-broth enriched cultures-the FDA-approved source. Subsequent whole genome sequencing (WGS) analysis of isolates recovered from breastmilk and blood cultures from the infants demonstrated all strains were related and characterized as ST-452. Both infants responded very well to treatment and continued to have no related events or concerns at the two-year follow up appointment. CONCLUSIONS: Strain type 452 (capsular type IV) has recently emerged as a hypervirulent strain and has previously been documented as causing GBS infections in elderly populations. Antibiotic therapy resolved both mother and infant infections. Subsequent testing for the presence of GBS in breastmilk samples also showed an absence of bacteria. This is the first report of infant twins late-onset GBS infections caused by the hypervirulent S. agalactiae ST-452 with breastmilk as the source.


Subject(s)
Bacteremia/microbiology , Infant, Newborn, Diseases/microbiology , Milk, Human/microbiology , Streptococcal Infections/transmission , Streptococcus agalactiae/genetics , Streptococcus agalactiae/isolation & purification , Adult , Bacteremia/blood , Bacteremia/diagnosis , Bacteremia/transmission , Blood/microbiology , Breast Milk Expression , Female , Humans , Infant, Newborn , Infant, Newborn, Diseases/blood , Infant, Newborn, Diseases/diagnosis , Infant, Premature/blood , Infectious Disease Transmission, Vertical , Male , Molecular Diagnostic Techniques , Phylogeny , Streptococcal Infections/blood , Streptococcal Infections/diagnosis , Streptococcal Infections/microbiology , Streptococcus agalactiae/classification , Streptococcus agalactiae/pathogenicity , Virulence
20.
PLoS Comput Biol ; 16(10): e1007838, 2020 10.
Article in English | MEDLINE | ID: mdl-33017395

ABSTRACT

Prevalence of impetigo (skin sores) remains high in remote Australian Aboriginal communities, Fiji, and other areas of socio-economic disadvantage. Skin sore infections, driven primarily in these settings by Group A Streptococcus (GAS) contribute substantially to the disease burden in these areas. Despite this, estimates for the force of infection, infectious period and basic reproductive ratio-all necessary for the construction of dynamic transmission models-have not been obtained. By utilising three datasets each containing longitudinal infection information on individuals, we estimate each of these epidemiologically important parameters. With an eye to future study design, we also quantify the optimal sampling intervals for obtaining information about these parameters. We verify the estimation method through a simulation estimation study, and test each dataset to ensure suitability to the estimation method. We find that the force of infection differs by population prevalence, and the infectious period is estimated to be between 12 and 20 days. We also find that optimal sampling interval depends on setting, with an optimal sampling interval between 9 and 11 days in a high prevalence setting, and 21 and 27 days for a lower prevalence setting. These estimates unlock future model-based investigations on the transmission dynamics of skin sores.


Subject(s)
Impetigo , Models, Biological , Australia/epidemiology , Computational Biology , Databases, Factual , Humans , Impetigo/epidemiology , Impetigo/microbiology , Impetigo/transmission , Native Hawaiian or Other Pacific Islander/statistics & numerical data , Prevalence , Streptococcal Infections/epidemiology , Streptococcal Infections/microbiology , Streptococcal Infections/transmission , Streptococcus pyogenes/pathogenicity
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