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1.
Nat Commun ; 15(1): 5535, 2024 Jul 01.
Article in English | MEDLINE | ID: mdl-38951545

ABSTRACT

The conversion of a soluble protein into polymeric amyloid structures is a process that is poorly understood. Here, we describe a fully redox-regulated amyloid system in which cysteine oxidation of the tumor suppressor protein p16INK4a leads to rapid amyloid formation. We identify a partially-structured disulfide-bonded dimeric intermediate species that subsequently assembles into fibrils. The stable amyloid structures disassemble when the disulfide bond is reduced. p16INK4a is frequently mutated in cancers and is considered highly vulnerable to single-point mutations. We find that multiple cancer-related mutations show increased amyloid formation propensity whereas mutations stabilizing the fold prevent transition into amyloid. The complex transition into amyloids and their structural stability is therefore strictly governed by redox reactions and a single regulatory disulfide bond.


Subject(s)
Amyloid , Cyclin-Dependent Kinase Inhibitor p16 , Cysteine , Oxidation-Reduction , Amyloid/metabolism , Amyloid/chemistry , Humans , Cyclin-Dependent Kinase Inhibitor p16/metabolism , Cyclin-Dependent Kinase Inhibitor p16/genetics , Cysteine/metabolism , Cysteine/chemistry , Disulfides/metabolism , Disulfides/chemistry , Sulfhydryl Compounds/metabolism , Sulfhydryl Compounds/chemistry , Mutation , Polymerization
2.
Anal Chim Acta ; 1316: 342818, 2024 Aug 08.
Article in English | MEDLINE | ID: mdl-38969402

ABSTRACT

Interdigitated electrodes (IDEs) enable electrochemical signal enhancement through repeated reduction and oxidation of the analyte molecule. Porosity on these electrodes is often used to lower the impedance background. However, their high capacitive current and signal interferences with oxygen reduction limit electrochemical detection ability. We present utilization of alkanethiol modification on nanoporous gold (NPG) electrodes to lower their background capacitance and chemically passivate them from interferences due to oxygen reduction, while maintaining their fast electron transfer rates, as validated by lower separation between anodic and cathodic peaks (ΔE) and lower charge transfer resistance (Rct) values in comparison to planar gold electrodes. Redox amplification based on this modification enables sensitive detection of various small molecules, including pyocyanin, p-aminophenol, and selective detection of dopamine in the presence of ascorbic acid. Alkanethiol NPG arrays are applied as a multiplexed sensor testbed within a well plate to screen binding of various peptide receptors to the SARS COV2 S-protein by using a sandwich assay for conversion of PAPP (4-aminophenyl phosphate) to PAP (p-aminophenol), by the action of AP (alkaline phosphatase), which is validated against optical ELISA screens of the peptides. Such arrays are especially of interest in small volume analytical settings with complex samples, wherein optical methods are unsuitable.


Subject(s)
Aminophenols , Electrochemical Techniques , Gold , Microelectrodes , Nanopores , Oxidation-Reduction , Gold/chemistry , Electrochemical Techniques/instrumentation , Aminophenols/chemistry , Sulfhydryl Compounds/chemistry , Dopamine/analysis , Dopamine/chemistry , Biosensing Techniques , Limit of Detection , SARS-CoV-2/isolation & purification , Humans
3.
Biosensors (Basel) ; 14(6)2024 May 26.
Article in English | MEDLINE | ID: mdl-38920576

ABSTRACT

Surface-enhanced Raman spectroscopy (SERS) tagging using silica(SiO2)@Ag nanoparticles (NPs) is easy to handle and is being studied in various fields, including SERS imaging and immunoassays. This is primarily due to its structural advantages, characterized by high SERS activity. However, the Ag NPs introduced onto the SiO2 surface may undergo structural transformation owing to the Ostwald ripening phenomenon under various conditions. As a result, the consistency of the SERS signal decreases, reducing their usability as SERS substrates. Until recently, research has been actively conducted to improve the stability of single Ag NPs. However, research on SiO2@Ag NPs used as a SERS-tagging material is still lacking. In this study, we utilized a Raman labeling compound (RLC) to prevent the structural deformation of SiO2@Ag NPs under various conditions and proposed excellent SiO2@Ag@RLC-Pre NPs as a SERS-tagging material. Using various RLCs, we confirmed that 4-mercaptobenzoic acid (4-MBA) is the RLC that maintains the highest stability for 2 months. These results were also observed for the SiO2@Ag NPs, which were unstable under various pH and temperature conditions. We believe that SERS tags using SiO2@Ag NPs and 4-MBA can be utilized in various applications on based SERS because of the high stability and consistency of the resulting SERS signal.


Subject(s)
Metal Nanoparticles , Silicon Dioxide , Silver , Spectrum Analysis, Raman , Silicon Dioxide/chemistry , Silver/chemistry , Metal Nanoparticles/chemistry , Surface Properties , Sulfhydryl Compounds/chemistry , Benzoates/chemistry
4.
Dalton Trans ; 53(26): 10947-10960, 2024 Jul 02.
Article in English | MEDLINE | ID: mdl-38895770

ABSTRACT

The search for new metal-based anticancer drug candidates is a fundamental task in medicinal inorganic chemistry. In this work, we assessed the potential of two new Ru(II)-phosphine-mercapto complexes as potential anticancer agents. The complexes, with the formula [Ru(bipy)(dppen)(Lx)]PF6 [(1), HL1 = 2-mercapto-pyridine and (2), HL2 = 2-mercapto-pyrimidine, bipy = 2,2'-bipyridine, dppen = cis-1,2-bis(diphenylphosphino)-ethylene] were synthesized and characterized by nuclear magnetic resonance (NMR) [1H, 31P(1H), and 13C], high resolution mass spectrometry (HR-MS), cyclic voltammetry, infrared and UV-Vis spectroscopies. Complex 2 was obtained as a mixture of two isomers, 2a and 2b, respectively. The composition of these metal complexes was confirmed by elemental analysis and liquid chromatography-mass spectrometry (LC-MS). To obtain insights into their lipophilicity, their distribution coefficients between n-octanol/PBS were determined. Both complexes showed affinity mainly for the organic phase, presenting positive log P values. Also, their stability was confirmed over 48 h in different media (i.e., DMSO, PBS and cell culture medium) via HPLC, UV-Vis and 31P{1H} NMR spectroscopies. Since enzymes from the P-450 system play a crucial role in cellular detoxification and metabolism, the microsomal stability of 1, which was found to be the most interesting compound of this study, was investigated using human microsomes to verify its potential oxidation in the liver. The analyses by LC-MS and ESI-MS reveal three main metabolites, obtained by oxidation in the dppen and bipy moieties. Moreover, 1 was able to interact with human serum albumin (HSA). The cytotoxicity of the metal complexes was tested in different cancerous and non-cancerous cell lines. Complex 1 was found to be more selective than cisplatin against MDA-MB-231 breast cancer cells when compared to MCF-10A non-cancerous cells. In addition, complex 1 affects cell morphology and migration, and inhibits colony formation in MDA-MB-231 cells, making it a promising cytotoxic agent against breast cancer.


Subject(s)
Antineoplastic Agents , Coordination Complexes , Phosphines , Ruthenium , Humans , Antineoplastic Agents/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/chemical synthesis , Phosphines/chemistry , Phosphines/pharmacology , Ruthenium/chemistry , Ruthenium/pharmacology , Coordination Complexes/chemistry , Coordination Complexes/pharmacology , Coordination Complexes/chemical synthesis , Cell Line, Tumor , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/pharmacology , Cell Proliferation/drug effects , Cell Survival/drug effects , Drug Screening Assays, Antitumor , Molecular Structure
5.
Chem Commun (Camb) ; 60(55): 7025-7028, 2024 Jul 04.
Article in English | MEDLINE | ID: mdl-38888299

ABSTRACT

We describe a versatile and tuneable thiol responsive linker system using thiovinylketones, which relies on the conjugate addition-elimination mechanism of Michael acceptors for the traceless release of therapeutics. In a proof-of-principle study, we translate our findings to exhibit potent thiol-cleavable antibiotic prodrugs and antibody-drug conjugates.


Subject(s)
Drug Liberation , Immunoconjugates , Prodrugs , Sulfhydryl Compounds , Prodrugs/chemistry , Sulfhydryl Compounds/chemistry , Humans , Immunoconjugates/chemistry , Anti-Bacterial Agents/chemistry , Molecular Structure , Ketones/chemistry
6.
Spectrochim Acta A Mol Biomol Spectrosc ; 320: 124664, 2024 Nov 05.
Article in English | MEDLINE | ID: mdl-38901234

ABSTRACT

As a valuable industrial chemical, thiophenol (PhSH) is poisonous, which can be easily absorbed by the human body, leading to many serious health issues. In addition, PhSH-triggered oxidative stress is considered to be related with the pathogenesis and toxicity of PhSH. Therefore, efficient methods for monitoring PhSH and ROS production induced by PhSH in living systems are very meaningful and desired. Herein, we reasonably developed a facile dual-response fluorescent probe (HDB-DNP) by incorporating the dinitrophenyl (DNP) group into a novel methylthio-substituted salicylaldehyde azine (HDB) with AIE and ESIPT features. The probe itself was non-fluorescent owing to the strong quenching effect of DNP group. In the presence of PhSH, HDB-DNP gave an intense red fluorescence (610 nm), which can rapidly switch to green fluorescence (510 nm) upon further addition of HClO, allowing the successive detection of PhSH and HClO in two well-separated channels. HDB-DNP proved to be a very promising dual-functional probe for rapid (PhSH: < 17 min; HClO: 10 s) and selective detection of PhSH and HClO in physiological conditions with low detection limit (PhSH: 13.8 nM; HClO: 88.6 nM). Inspired by its excellent recognition properties and low cytotoxicity, HDB-DNP was successfully applied for monitoring PhSH and PhSH-induced HClO generation in living cells with satisfactory results, which may help to better understand the pathogenesis of PhSH-related diseases.


Subject(s)
Fluorescent Dyes , Hypochlorous Acid , Oxidative Stress , Phenols , Spectrometry, Fluorescence , Sulfhydryl Compounds , Fluorescent Dyes/chemistry , Humans , Oxidative Stress/drug effects , Hypochlorous Acid/analysis , Sulfhydryl Compounds/chemistry , Phenols/chemistry , Phenols/pharmacology , HeLa Cells
7.
Langmuir ; 40(23): 12117-12123, 2024 Jun 11.
Article in English | MEDLINE | ID: mdl-38826127

ABSTRACT

Electrochemical aptamer-based (E-AB) sensors are a promising class of biosensors which use structure-switching redox-labeled oligonucleotides (aptamers) codeposited with passivating alkanethiol monolayers on electrode surfaces to specifically bind and detect target analytes. Signaling in E-AB sensors is an outcome of aptamer conformational changes upon target binding, with the sequence of the aptamer imparting specificity toward the analyte of interest. The change in conformation translates to a change in electron transfer between the redox label attached to the aptamer and the underlying electrode and is related to analyte concentration, allowing specific electrochemical detection of nonelectroactive analytes. E-AB sensor measurements are reagentless with time resolutions of seconds or less and may be miniaturized into the submicron range. Traditionally these sensors are fabricated using thiol-on-gold chemistry. Here we present an alternate immobilization chemistry, gold-alkyne binding, which results in an increase in sensor lifetimes under ideal conditions by up to ∼100%. We find that gold-alkyne binding is spontaneous and supports efficient E-AB sensor signaling with analytical performance characteristics similar to those of thiol generated monolayers. The surface modification differs from gold-thiol binding only in the time and aptamer concentration required to achieve similar aptamer surface coverages. In addition, alkynated aptamers differ from their thiolated analogues only by their chemical handle for surface attachment, so any existing aptamers can be easily adapted to utilize this attachment strategy.


Subject(s)
Alkynes , Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , Gold , Aptamers, Nucleotide/chemistry , Gold/chemistry , Biosensing Techniques/methods , Electrochemical Techniques/methods , Alkynes/chemistry , Electrodes , Sulfhydryl Compounds/chemistry
8.
Anal Chim Acta ; 1312: 342768, 2024 Jul 11.
Article in English | MEDLINE | ID: mdl-38834271

ABSTRACT

A novel biothiols-sensitive near-infrared (NIR) fluorescent probe RhDN based on a rhodamine skeleton was developed for early detection of drug-induced hepatotoxicity in living mice. RhDN can be used not only as a conventional large stokes shift fluorescent (FL) probe, but also as a kind of anti-Stokes frequency upconversion luminescence (FUCL) molecular probe, which represents a long wavelength excitation (808 nm) to short wavelength emission (760 nm), and response to Cys/Hcy/GSH with high sensitivity. Compared with traditional FL methods, the FUCL method exhibited a lower detection limit of Cys, Hcy, and GSH in 75.1 nM, 101.8 nM, and 84.9 nM, respectively. We exemplify RhDN for tracking endogenously biothiols distribution in living cells and further realize real-time in vivo bioimaging of biothiols activity in mice with dual-mode luminescence system. Moreover, RhDN has been successfully applied to visualize the detection of drug-induced hepatotoxicity in living mice. Overall, this report presents a unique approach to the development of large stokes shift NIR FUCL molecular probes for in vitro and in vivo biothiols biosensing.


Subject(s)
Chemical and Drug Induced Liver Injury , Fluorescent Dyes , Animals , Fluorescent Dyes/chemistry , Fluorescent Dyes/toxicity , Chemical and Drug Induced Liver Injury/diagnostic imaging , Mice , Humans , Infrared Rays , Optical Imaging , Glutathione/analysis , Sulfhydryl Compounds/analysis , Sulfhydryl Compounds/chemistry , Cysteine/analysis , Rhodamines/chemistry , Rhodamines/toxicity , Homocysteine/analysis , Luminescence
9.
Methods Mol Biol ; 2832: 99-113, 2024.
Article in English | MEDLINE | ID: mdl-38869790

ABSTRACT

Redox modulation is a common posttranslational modification to regulate protein activity. The targets of oxidizing agents are cysteine residues (Cys), which have to be exposed at the surface of the proteins and are characterized by an environment that favors redox modulation. This includes their protonation state and the neighboring amino acids. The Cys redox state can be assessed experimentally by redox titrations to determine the midpoint redox potential in the protein. Exposed cysteine residues and putative intramolecular disulfide bonds can be predicted by alignments with structural data using dedicated software tools and information on conserved cysteine residues. Labeling with light and heavy reagents, such as N-ethylmaleimide (NEM), followed by mass spectrometric analysis, allows for the experimental determination of redox-responsive cysteine residues. This type of thiol redox proteomics is a powerful approach to assessing the redox state of the cell, e.g., in dependence on environmental conditions and, in particular, under abiotic stress.


Subject(s)
Cysteine , Oxidation-Reduction , Proteomics , Sulfhydryl Compounds , Cysteine/metabolism , Cysteine/chemistry , Proteomics/methods , Sulfhydryl Compounds/metabolism , Sulfhydryl Compounds/chemistry , Stress, Physiological , Protein Processing, Post-Translational , Mass Spectrometry/methods , Proteins/chemistry , Proteins/metabolism
10.
Org Lett ; 26(23): 5021-5026, 2024 Jun 14.
Article in English | MEDLINE | ID: mdl-38842216

ABSTRACT

We describe a simple and robust oxidation strategy for preparing N-terminal thiazolidine-containing peptide thioesters from peptide hydrazides. We find for the first time that l-thioproline can be used as a protective agent to prevent the nitrosation of N-terminal thiazolidine during peptide hydrazide oxidation. The thioproline-based oxidation strategy has been successfully applied to the chemical synthesis of CC chemokine ligand-2 (69aa) and omniligase-C (113aa), thereby demonstrating its utility in hydrazide-based native chemical ligation.


Subject(s)
Oxidation-Reduction , Peptides , Thiazolidines , Thiazolidines/chemistry , Thiazolidines/chemical synthesis , Molecular Structure , Peptides/chemistry , Peptides/chemical synthesis , Hydrazines/chemistry , Proline/chemistry , Esters/chemistry , Sulfhydryl Compounds/chemistry
11.
Molecules ; 29(12)2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38930937

ABSTRACT

Polyphenols from agro-food waste represent a valuable source of bioactive molecules that can be recovered to be used for their functional properties. Another option is to use them as starting material to generate molecules with new and better properties through semi-synthesis. A proanthocyanidin-rich (PACs) extract from avocado peels was used to prepare several semi-synthetic derivatives of epicatechin by acid cleavage in the presence of phenol and thiol nucleophiles. The adducts formed by this reaction were successfully purified using one-step centrifugal partition chromatography (CPC) and identified by chromatographic and spectroscopic methods. The nine derivatives showed a concentration-dependent free radical scavenging activity in the DPPH assay. All compounds were also tested against a panel of pathogenic bacterial strains formed by Listeria monocytogenes (ATCC 7644 and 19115), Staphylococcus aureus (ATCC 9144), Escherichia coli (ATCC 11775 and 25922), and Salmonella enterica (ATCC 13076). In addition, adducts were tested against two no-pathogenic strains, Limosilactobacillus fermentum UCO-979C and Lacticaseibacillus rhamnosus UCO-25A. Overall, thiol-derived adducts displayed antimicrobial properties and, in some specific cases, inhibited biofilm formation, particularly in Listeria monocytogenes (ATCC 7644). Interestingly, phenolic adducts were inactive against all the strains and could not inhibit its biofilm formation. Moreover, depending on the structure, in specific cases, biofilm formation was strongly promoted. These findings contribute to demonstrating that CPC is a powerful tool to isolate new semi-synthetic molecules using avocado peels as starting material for PACc extraction. These compounds represent new lead molecules with antioxidant and antimicrobial activity.


Subject(s)
Antioxidants , Catechin , Persea , Proanthocyanidins , Persea/chemistry , Antioxidants/pharmacology , Antioxidants/chemistry , Antioxidants/chemical synthesis , Proanthocyanidins/chemistry , Proanthocyanidins/pharmacology , Proanthocyanidins/chemical synthesis , Proanthocyanidins/isolation & purification , Catechin/chemistry , Catechin/pharmacology , Plant Extracts/chemistry , Plant Extracts/pharmacology , Microbial Sensitivity Tests , Anti-Infective Agents/pharmacology , Anti-Infective Agents/chemistry , Anti-Infective Agents/chemical synthesis , Sulfhydryl Compounds/chemistry , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/chemical synthesis , Anti-Bacterial Agents/isolation & purification , Phenols/chemistry , Phenols/pharmacology , Phenols/isolation & purification , Phenols/chemical synthesis
12.
J Org Chem ; 89(11): 7455-7471, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38773695

ABSTRACT

An air-stable, robust, and well-defined copper(II)-7-azaindole-N-oxide-based catalyst [Cu2II(7-AINO)4] (abbreviated as Cu(II)-7-AINO) has been demonstrated as an efficient catalyst for various Ullmann-type coupling reactions. This easily prepared and cost-effective catalyst facilitates the arylation and heteroarylation of diverse N-, S-, and O-nucleophiles, including azoles, aminoazoles, (hetero)arylthiols, and phenols. Notably, they also exhibit substantial compatibility with a wide range of functional groups. Furthermore, the catalyst demonstrates significant selectivity for -NH sites of aminoazoles and -SH sites of aminothiophenols over -NH2 sites in both cases, enhancing its versatility. Exploiting the catalyst's chemo- and regioselective properties, we have successfully demonstrated the applicability of our methodology in synthesizing various drug molecules. Specifically, Epirizole analogue, Nilotinib, and Vortioxetine were successfully synthesized using our protocol.


Subject(s)
Copper , Catalysis , Copper/chemistry , Oxides/chemistry , Molecular Structure , Sulfhydryl Compounds/chemistry , Phenols/chemistry , Models, Molecular
13.
Phys Chem Chem Phys ; 26(23): 16407-16437, 2024 Jun 12.
Article in English | MEDLINE | ID: mdl-38807475

ABSTRACT

As one of the most instrumental components in the architecture of advanced nanomedicines, plasmonic nanostructures (mainly gold and silver nanomaterials) have been paid a lot of attention. This type of nanomaterial can absorb light photons with a specific wavelength and generate heat or excited electrons through surface resonance, which is a unique physical property. In innovative biomaterials, a significant number of theranostic (therapeutic and diagnostic) materials are produced through the conjugation of thiol-containing ingredients with gold and silver nanoparticles (Au and Ag NPs). Hence, it is essential to investigate Au/Ag-S interfaces precisely and determine the exact bonding states in the active nanobiomaterials. This study intends to provide useful insights into the interactions between Au/Ag NPs and thiol groups that exist in the structure of biomaterials. In this regard, the modeling of Au/Ag-S bonding in active biological ingredients is precisely reviewed. Then, the physiological stability of Au/Ag-based plasmonic nanobioconjugates in real physiological environments (pharmacokinetics) is discussed. Recent experimental validation and achievements of plasmonic theranostics and radiolabelled nanomaterials based on Au/Ag-S conjugation are also profoundly reviewed. This study will also help researchers working on biosensors in which plasmonic devices deal with the thiol-containing biomaterials (e.g., antibodies) inside blood serum and living cells.


Subject(s)
Gold , Metal Nanoparticles , Silver , Sulfur , Gold/chemistry , Silver/chemistry , Metal Nanoparticles/chemistry , Sulfur/chemistry , Humans , Theranostic Nanomedicine , Biocompatible Materials/chemistry , Animals , Sulfhydryl Compounds/chemistry , Nanostructures/chemistry
14.
Chemosphere ; 360: 142410, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38795912

ABSTRACT

The development of functionalized covalent organic frameworks (COFs) is crucial in expanding their potential for removing toxic heavy metals from drinking water. Here, a new sulfhydryl-modified heteroporous COF (COFDBD-BTA) was prepared using a "bottom-up" approach in which a direct amine-aldehyde dehydration condensation between 2,5-diamino-1,4-benzenedithiol dihydrochloride (DBD) and [1,1'-biphenyl]-3,3',5,5'-tetracarbaldehyde (BTA) was occurred. The COFDBD-BTA featured a hexagonal kagome (kgm) structure and a sheet-like morphology. Notably, COFDBD-BTA contained densely S atoms that provided high-density Hg(II) adsorption sites for efficient and selective trace Hg(II) removal. COFDBD-BTA exhibited excellent performance in rapidly removing trace Hg(II) from 30 µg L-1 to 0.71 µg L-1 within 10 s, below the World Health Organization's allowable limit of 1 µg L-1. Additionally, COFDBD-BTA exhibited a high Hg (Ⅱ) removal level from water, achieving adsorption capacity of 687.38 mg g-1. Furthermore, the adsorbent exhibited a wide range of applicability for low concentration (6-500 µg L-1) Hg (Ⅱ), a simple and feasible regeneration method, and strong Hg(II) removal ability in real tap water systems. The excellent adsorption efficiency, outstanding recyclability, and one-step room temperature synthesis make S-rich COFDBD-BTA a promising candidate for eliminating Hg (Ⅱ) from drinking water.


Subject(s)
Mercury , Metal-Organic Frameworks , Sulfhydryl Compounds , Water Pollutants, Chemical , Water Purification , Mercury/chemistry , Water Pollutants, Chemical/chemistry , Water Pollutants, Chemical/analysis , Adsorption , Water Purification/methods , Metal-Organic Frameworks/chemistry , Sulfhydryl Compounds/chemistry , Drinking Water/chemistry , Porosity
15.
Spectrochim Acta A Mol Biomol Spectrosc ; 318: 124487, 2024 Oct 05.
Article in English | MEDLINE | ID: mdl-38805989

ABSTRACT

L-cysteine, an indispensable amino acid present in natural proteins, plays pivotal roles in various biological processes. Consequently, precise and selective monitoring of its concentrations is imperative. Herein, we propose a Surface-enhanced Raman Scattering (SERS) sensor for detecting L-cysteine based on the anti-aggregation of 4-mercaptobenzoic acid (4-MBA) and histidine (His) functionalized silver nanoparticles (Ag NPs). The presence of Hg2+ ions can induce the aggregation of Ag NPs@His@4-MBA due to the unique nanostructures of Ag NPs@His@4-MBA, resulting in a robust SERS intensity of 4-MBA. However, in the presence of L-cysteine, the stronger affinity between L-cysteine and Hg2+ reduces the concentration of free Hg2+, causing the dispersion of the aggregated functionalized Ag NPs and the reduction of the SERS signal intensity of 4-MBA. The developed SERS platform demonstrates excellent performance with a low detection limit of 5 nM (S/N = 3) and linear detection capabilities within the range of 0.01-100 µM for L-cysteine. Additionally, the method was successfully employed for the determination of L-cysteine in spiked serum samples, yielding recoveries ranging from 95.0 % to 108.1 % with relative standard deviations of less than 3.3 %. This study not only presents a novel approach for fabricating highly sensitive and specific SERS biosensors for biomolecule detection but also offers a significant strategy for the development and construction of SERS substrates using anti-aggregation design.


Subject(s)
Cysteine , Limit of Detection , Metal Nanoparticles , Silver , Spectrum Analysis, Raman , Silver/chemistry , Spectrum Analysis, Raman/methods , Cysteine/analysis , Cysteine/blood , Metal Nanoparticles/chemistry , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/blood , Sulfhydryl Compounds/analysis , Benzoates/chemistry , Histidine/analysis , Histidine/chemistry , Histidine/blood
16.
Anal Methods ; 16(23): 3684-3691, 2024 Jun 13.
Article in English | MEDLINE | ID: mdl-38804857

ABSTRACT

Fluorescent labeling is a widely used method for protein detection and fluorescence imaging. A solvatochromic and fluorogenic molecular rotor DASPBCl was developed for covalent protein labeling in solution and SDS-PAGE, and also for stable mitochondria labeling and fluorescence imaging. The dye DASPBCl consisted of a 4-(N,N-dimethylamino)phenyl moiety as the electron donor and a positively charged N-benzylpyridinium moiety as the electron acceptor. A benzyl chloride group was introduced into the pyridine moiety for covalent labeling of thiol in proteins. When the fluorescent dye DASPBCl is covalently labeled to the thiol of proteins, significantly enhanced fluorescence was obtained, which is attributed to the polarity sensitivity caused solvatochromic effect from the hydrophobic protein structure and the viscosity sensitivity caused fluorogenic effect from the restriction of single bond rotation. DASPBCl exhibits high sensitivity and good linear response for protein detection in SDS-PAGE analysis with both the pre-staining method and post-staining method. DASPBCl was also successfully used for covalently protein-anchored fluorescence imaging of mitochondria in living cells.


Subject(s)
Electrophoresis, Polyacrylamide Gel , Fluorescent Dyes , Mitochondria , Sulfhydryl Compounds , Fluorescent Dyes/chemistry , Mitochondria/chemistry , Mitochondria/metabolism , Humans , Electrophoresis, Polyacrylamide Gel/methods , Sulfhydryl Compounds/chemistry , Sulfhydryl Compounds/analysis , Optical Imaging/methods , HeLa Cells , Staining and Labeling/methods , Proteins/chemistry , Proteins/analysis
17.
Carbohydr Polym ; 337: 122144, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-38710569

ABSTRACT

In vivo, cells interact with the extracellular matrix (ECM), which provides a multitude of biophysical and biochemical signals that modulate cellular behavior. Inspired by this, we explored a new methodology to develop a more physiomimetic polysaccharide-based matrix for 3D cell culture. Maleimide-modified alginate (AlgM) derivatives were successfully synthesized using DMTMM to activate carboxylic groups. Thiol-terminated cell-adhesion peptides were tethered to the hydrogel network to promote integrin binding. Rapid and efficient in situ hydrogel formation was promoted by thiol-Michael addition "click" chemistry via maleimide reaction with thiol-flanked protease-sensitive peptides. Alginate derivatives were further ionically crosslinked by divalent ions present in the medium, which led to greater stability and allowed longer cell culture periods. By tailoring alginate's biofunctionality we improved cell-cell and cell-matrix interactions, providing an ECM-like 3D microenvironment. We were able to systematically and independently vary biochemical and biophysical parameters to elicit specific cell responses, creating custom-made 3D matrices. DMTMM-mediated maleimide incorporation is a promising approach to synthesizing AlgM derivatives that can be leveraged to produce ECM-like matrices for a broad range of applications, from in vitro tissue modeling to tissue regeneration.


Subject(s)
Alginates , Click Chemistry , Extracellular Matrix , Hydrogels , Maleimides , Sulfhydryl Compounds , Humans , Alginates/chemistry , Cell Adhesion/drug effects , Cross-Linking Reagents/chemistry , Extracellular Matrix/metabolism , Extracellular Matrix/chemistry , Hydrogels/chemistry , Hydrogels/chemical synthesis , Maleimides/chemistry , Sulfhydryl Compounds/chemistry
18.
Anal Biochem ; 692: 115568, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38750681

ABSTRACT

Malodorants are mixtures containing mercaptans, which trigger the flight instinct upon exposure and might thus be deployed in military and civilian defense scenarios. Exposure to mercaptans might lead to unconsciousness, thus representing a possible threat for health. Therefore, we developed and validated a bioanalytical procedure for the simultaneous detection and identification of corresponding biomarkers for the verification of exposure to mercaptans. Disulfide-adducts of ethyl mercaptan (SEt), n-butyl mercaptan (SnBu), tert-butyl mercaptan (StBu) and iso-amyl mercaptan (SiAm) with cysteine (Cys) residues in human serum albumin (HSA) were formed by in vitro incubation of human plasma. After pronase-catalyzed proteolysis, reaction products were identified as adducts of the single amino acid Cys and the dipeptide cysteine-proline (Cys34Pro) detected by a sensitive µLC-ESI MS/MS method working in the scheduled multiple reaction monitoring (sMRM) mode. Dose-response studies showed linearity for the yield of Cys34Pro-adducts in the range from 6 nM to 300 µM of mercaptans in plasma and limits of identification (LOI) were in the range from 60 nM to 6 µM. Cys34-adducts showed stability for at least 6 days in plasma (37 °C). The presented disulfide-biomarkers expand the spectrum for bioanalytical verification procedures and might be helpful to prove exposure to malodorants.


Subject(s)
Cysteine , Disulfides , Serum Albumin, Human , Sulfhydryl Compounds , Humans , Cysteine/chemistry , Cysteine/blood , Serum Albumin, Human/chemistry , Disulfides/chemistry , Sulfhydryl Compounds/chemistry , Tandem Mass Spectrometry/methods , Odorants/analysis , Biomarkers/blood
19.
ACS Biomater Sci Eng ; 10(5): 3343-3354, 2024 05 13.
Article in English | MEDLINE | ID: mdl-38695560

ABSTRACT

Moldable tissue-sealant hydrogels were developed herein by combining the yield stress fluidity of a Carbomer and in situ cross-linking of 3-arm PEG-thiol (PEG-SH) and 4-arm PEG-acrylate (PEG-AC). The Carbomer was mixed with each PEG oligomer to form two aqueous precursors: Carbomer/PEG-SH and Carbomer/PEG-AC. The two hydrogel precursors exhibited sufficient yield stress (>100 Pa) to prevent dripping from their placement on the tissue surface. Moreover, these hydrogel precursors exhibited rapid restructuring when the shear strain was repeatedly changed. These rheological properties contribute to the moldability of these hydrogel precursors. After mixing these two precursors, they were converted from yield-stress fluids to chemically cross-linked hydrogels, Carbomer/PEG hydrogel, via thiol-Michael addition. The gelation time was 5.0 and 11.2 min at 37 and 25 °C, respectively. In addition, the Carbomer/PEG hydrogels exhibited higher cellular viability than the pure Carbomer. They also showed stable adhesiveness and burst pressure resistance to various tissues, such as the skin, stomach, colon, and cecum of pigs. The hydrogels showed excellent tissue sealing in a cecum ligation and puncture model in mice and improved the survival rate due to their tissue adhesiveness and biocompatibility. The Carbomer/PEG hydrogel is a potential biocompatible tissue sealant that surgeons can mold. It was revealed that the combination of in situ cross-linkable PEG oligomers and yield stress fluid such as Carbomer is effective for developing the moldable tissue sealant without dripping of its hydrogel precursors.


Subject(s)
Hydrogels , Polyethylene Glycols , Sulfhydryl Compounds , Hydrogels/chemistry , Hydrogels/pharmacology , Polyethylene Glycols/chemistry , Animals , Mice , Sulfhydryl Compounds/chemistry , Tissue Adhesives/chemistry , Tissue Adhesives/pharmacology , Swine , Cross-Linking Reagents/chemistry , Rheology , Humans , Acrylic Resins
20.
J Biol Inorg Chem ; 29(3): 291-301, 2024 04.
Article in English | MEDLINE | ID: mdl-38722396

ABSTRACT

In addition to its primary oxygen-atom-transfer function, cysteamine dioxygenase (ADO) exhibits a relatively understudied anaerobic disproportionation reaction (ADO-Fe(III)-SR → ADO-Fe(II) + ½ RSSR) with its native substrates. Inspired by ADO disproportionation reactivity, we employ [Fe(tacn)Cl3] (tacn = 1,4,7-triazacyclononane) as a precursor for generating Fe(III)-thiolate model complexes in buffered aqueous media. A series of Fe(III)-thiolate model complexes are generated in situ using aqueous [Fe(tacn)Cl3] and thiol-containing ligands cysteamine, penicillamine, mercaptopropionate, cysteine, cysteine methyl ester, N-acetylcysteine, and N-acetylcysteine methyl ester. We observe trends in UV-Vis and electron paramagnetic resonance (EPR) spectra, disproportionation rate constants, and cathodic peak potentials as a function of thiol ligand. These trends will be useful in rationalizing substrate-dependent Fe(III)-thiolate disproportionation reactions in metalloenzymes.


Subject(s)
Ferric Compounds , Sulfhydryl Compounds , Kinetics , Sulfhydryl Compounds/chemistry , Hydrogen-Ion Concentration , Ferric Compounds/chemistry , Ferric Compounds/metabolism , Electron Spin Resonance Spectroscopy , Dioxygenases/metabolism , Dioxygenases/chemistry , Electrochemical Techniques
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