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1.
Geobiology ; 22(4): e12611, 2024.
Article de Anglais | MEDLINE | ID: mdl-39020475

RÉSUMÉ

The osmotic rupture of a cell, its osmotic lysis or cytolysis, is a phenomenon that active biological cell volume regulation mechanisms have evolved in the cell membrane to avoid. How then, at the origin of life, did the first protocells survive prior to such active processes? The pores of alkaline hydrothermal vents in the oceans form natural nanoreactors in which osmosis across a mineral membrane plays a fundamental role. Here, we discuss the dynamics of lysis and its avoidance in an abiotic system without any active mechanisms, reliant upon self-organized behaviour, similar to the first self-organized mineral membranes within which complex chemistry may have begun to evolve into metabolism. We show that such mineral nanoreactors could function as protocells without exploding because their self-organized dynamics have a large regime in parameter space where osmotic lysis does not occur and homeostasis is possible. The beginnings of Darwinian evolution in proto-biochemistry must have involved the survival of protocells that remained within such a safe regime.


Sujet(s)
Cellules artificielles , Origine de la vie , Osmose , Cellules artificielles/métabolisme , Minéraux/métabolisme , Minéraux/composition chimique , Pression osmotique , Membrane cellulaire/métabolisme
2.
Phys Chem Chem Phys ; 24(29): 17841-17851, 2022 Jul 27.
Article de Anglais | MEDLINE | ID: mdl-35851594

RÉSUMÉ

Chemical gardens are self-assembled structures of mineral precipitates enabled by semi-permeable membranes. To explore the effects of gravity on the formation of chemical gardens, we have studied chemical gardens grown from cobalt chloride pellets and aqueous sodium silicate solution in a vertical Hele-Shaw cell. Through photography, we have observed and quantitatively analysed upward growing tubes and downward growing fingers. The latter were not seen in previous experimental studies involving similar physicochemical systems in 3-dimensional or horizontal confined geometry. To better understand the results, further studies of flow patterns, buoyancy forces, and growth dynamics under schlieren optics have been carried out, together with characterisation of the precipitates with scanning electron microscopy and X-ray diffractometry. In addition to an ascending flow and the resulting precipitation of tubular filaments, a previously not reported descending flow has been observed which, under some conditions, is accompanied by precipitation of solid fingering structures. We conclude that the physics of both the ascending and descending flows are shaped by buoyancy, together with osmosis and chemical reaction. The existence of the descending flow might highlight a limitation in current experimental methods for growing chemical gardens under gravity, where seeds are typically not suspended in the middle of the solution and are confined by the bottom of the vessel.

3.
Chaos ; 32(5): 053107, 2022 May.
Article de Anglais | MEDLINE | ID: mdl-35649986

RÉSUMÉ

When confined to a Hele-Shaw cell, chemical gardens can grow as filaments, narrow structures with an erratic and tortuous trajectory. In this work, the methodology applied to studies with horizontal Hele-Shaw cells is adapted to a vertical configuration, thus introducing the effect of buoyancy into the system. The motion of a single filament tip is modeled by taking into account its internal pressure and the variation of the concentration of precipitate that constitutes the chemical garden membrane. While the model shows good agreement with the results, it also suggests that the concentration of the host solution of sodium silicate also plays a role in the growth of the structures despite being in stoichiometric excess.

4.
Langmuir ; 38(21): 6700-6710, 2022 05 31.
Article de Anglais | MEDLINE | ID: mdl-35593590

RÉSUMÉ

We describe and study the formation of confined chemical garden patterns. At low flow rates of injection of cobalt chloride solution into a Hele-Shaw cell filled with sodium silicate, the precipitate forms with a thin filament wrapping around an expanding "candy floss" structure. The result is the formation of an Archimedean spiral structure. We model the growth of the structure mathematically. We estimate the effective density of the precipitate and calculate the membrane permeability. We set the results within the context of recent experimental and modeling work on confined chemical garden filaments.

5.
Phys Chem Chem Phys ; 23(9): 5222-5235, 2021 Mar 11.
Article de Anglais | MEDLINE | ID: mdl-33629080

RÉSUMÉ

Filaments in a planar chemical garden grow following tortuous, erratic paths. We show from statistical mechanics that this scaling results from a self-organized dispersion mechanism. Effective diffusivities as high as 10-5 m2 s-1 are measured in 2D laboratory experiments. This efficient transport is four orders of magnitude larger than molecular diffusion in a liquid, and ensures widespread contact and exchange between fluids in the chemical-garden structure and its surrounding environment.

6.
Philos Trans A Math Phys Eng Sci ; 378(2179): 20200160, 2020 Sep 04.
Article de Anglais | MEDLINE | ID: mdl-32762430

RÉSUMÉ

We present the second half of the papers from the Stokes200 symposium celebrating the bicentenary of George Gabriel Stokes. This article is part of the theme issue 'Stokes at 200 (part 2)'.

7.
Artif Life ; 26(3): 315-326, 2020.
Article de Anglais | MEDLINE | ID: mdl-32697160

RÉSUMÉ

Self-organizing precipitation processes, such as chemical gardens forming biomimetic micro- and nanotubular forms, have the potential to show us new fundamental science to explore, quantify, and understand nonequilibrium physicochemical systems, and shed light on the conditions for life's emergence. The physics and chemistry of these phenomena, due to the assembly of material architectures under a flux of ions, and their exploitation in applications, have recently been termed chemobrionics. Advances in understanding in this area require a combination of expertise in physics, chemistry, mathematical modeling, biology, and nanoengineering, as well as in complex systems and nonlinear and materials sciences, giving rise to this new synergistic discipline of chemobrionics.


Sujet(s)
Biologie , Biomimétique , Chimie , Ingénierie , Recherche interdisciplinaire , Origine de la vie , Physique , Sciences des matériaux , Modèles théoriques , Nanostructures
8.
J R Soc Interface ; 17(168): 20200187, 2020 07.
Article de Anglais | MEDLINE | ID: mdl-32693749

RÉSUMÉ

Stingless bees of the genus Tetragonula construct a brood comb with a spiral or a target pattern architecture in three dimensions. Crystals possess these same patterns on the molecular scale. Here, we show that the same excitable-medium dynamics governs both crystal nucleation and growth and comb construction in Tetragonula, so that a minimal coupled-map lattice model based on crystal growth explains how these bees produce the structures seen in their bee combs.


Sujet(s)
Abeilles , Animaux
9.
Philos Trans A Math Phys Eng Sci ; 378(2174): 20190505, 2020 Jun 26.
Article de Anglais | MEDLINE | ID: mdl-32507087

RÉSUMÉ

Sir George Gabriel Stokes PRS was for 30 years an inimitable Secretary of the Royal Society and its President from 1885 to 1890. Two hundred years after his birth, Stokes is a towering figure in physics and applied mathematics; fluids, asymptotics, optics, acoustics among many other fields. At the Stokes200 meeting, held at Pembroke College, Cambridge from 15-18th September 2019, an invited audience of about 100 discussed the state of the art in all the modern research fields that have sprung from his work in physics and mathematics, along with the history of how we have got from Stokes' contributions to where we are now. This theme issue is based on work presented at the Stokes200 meeting. In bringing together people whose work today is based upon Stokes' own, we aim to emphasize his influence and legacy at 200 to the community as a whole. This article is part of the theme issue 'Stokes at 200 (Part 1)'.

10.
Philos Trans A Math Phys Eng Sci ; 378(2174): 20200064, 2020 Jun 26.
Article de Anglais | MEDLINE | ID: mdl-32507093

RÉSUMÉ

Although we humans have known since the first smokey campfires of prehistory that our activities might alter our local surroundings, the nineteenth century saw the first indications that humankind might alter the global environment; what we currently know as anthropogenic climate change. We are now celebrating the bicentenaries of three figures with a hand in the birth of climate science. George Stokes, John Tyndall and John Ruskin were born in August 1819, August 1820 and February 1819, respectively. We look back from the perspective of two centuries following their births. We outline their contributions to climate science: understanding the equations of fluid motion and the recognition of the need to collect global weather data together with comprehending the role in regulating terrestrial temperature played by gases in the atmosphere. This knowledge was accompanied by fears of the Earth's regression to another ice age, together with others that industrialization was ruining humankind's health, morals and creativity. The former fears of global cooling were justified but seem strange now that the balance has tipped so far the other way towards global warming; the latter, on the other hand, today seem very prescient. This article is part of the theme issue 'Stokes at 200 (Part 1)'.


Sujet(s)
Climat , Science/histoire , Histoire du 19ème siècle , Histoire du 20ème siècle
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