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1.
J Chem Phys ; 152(6): 064111, 2020 Feb 14.
Article de Anglais | MEDLINE | ID: mdl-32061226

RÉSUMÉ

GronOR is a program package for non-orthogonal configuration interaction calculations for an electronic wave function built in terms of anti-symmetrized products of multi-configuration molecular fragment wave functions. The two-electron integrals that have to be processed may be expressed in terms of atomic orbitals or in terms of an orbital basis determined from the molecular orbitals of the fragments. The code has been specifically designed for execution on distributed memory massively parallel and Graphics Processing Unit (GPU)-accelerated computer architectures, using an MPI+OpenACC/OpenMP programming approach. The task-based execution model used in the implementation allows for linear scaling with the number of nodes on the largest pre-exascale architectures available, provides hardware fault resiliency, and enables effective execution on systems with distinct central processing unit-only and GPU-accelerated partitions. The code interfaces with existing multi-configuration electronic structure codes that provide optimized molecular fragment orbitals, configuration interaction coefficients, and the required integrals. Algorithm and implementation details, parallel and accelerated performance benchmarks, and an analysis of the sensitivity of the accuracy of results and computational performance to thresholds used in the calculations are presented.

2.
J Chem Phys ; 146(6): 064115, 2017 Feb 14.
Article de Anglais | MEDLINE | ID: mdl-28201885

RÉSUMÉ

We present a benchmark of the density functional linear response calculation of NMR shieldings within the gauge-including projector-augmented-wave method against all-electron augmented-plane-wave+local-orbital and uncontracted Gaussian basis set results for NMR shieldings in molecular and solid state systems. In general, excellent agreement between the aforementioned methods is obtained. Scalar relativistic effects are shown to be quite large for nuclei in molecules in the deshielded limit. The small component makes up a substantial part of the relativistic corrections.

3.
Phys Chem Chem Phys ; 15(9): 3286-93, 2013 Mar 07.
Article de Anglais | MEDLINE | ID: mdl-23358331

RÉSUMÉ

The ring-current aromaticity of the bicalicene molecule arises, in spite of the 16 π carbon perimeter, from strong local diatropic circulations on the two pentagonal rings, as shown by current-density maps computed at the ipsocentric RHF/6-311G** and DFT/6-311G** levels of theory. Conjugated-circuit models cannot capture this pattern of circulation as it arises from 'ionic' contributions in a valence-bond picture. Canonical molecular-orbital analysis reveals a cancellation of paratropic and diatropic frontier-orbital contributions, which explains the difficulties that Hückel-based models have in producing qualitatively correct current-density maps for this molecule. Other measures of aromaticity reflect, to different extents, the dominance of the 'tetraionic' contribution to the aromaticity of this species.


Sujet(s)
Hydrocarbures aromatiques/composition chimique , Composés polycycliques/composition chimique , Théorie quantique , Modèles moléculaires , Conformation moléculaire
4.
Magn Reson Chem ; 42 Spec no: S68-78, 2004 Oct.
Article de Anglais | MEDLINE | ID: mdl-15366043

RÉSUMÉ

The intimate link between chemical shifts and magnetic criteria for aromaticity prompts a search for detailed understanding of patterns of current density induced in pi systems by external magnetic fields. Conceptual and practical advantages of calculation of current densities with a specific method of distribution of origin of vector potential, the ipsocentric choice, where the induced current density at each point is calculated with that point as origin, are outlined. This choice leads uniquely to canonical molecular orbital contributions that are free of unphysical occupied-occupied mixing. Characteristic magnetic response of delocalized pi systems is then effectively restricted to the activity of a small number of frontier electrons, governed by simple symmetry and node-counting rules, and readily visualized in current density maps. Localized orbitals for sigma systems can also be used, again eliminating occupied-occupied mixing. For integrated properties (magnetizability and nuclear shieldings), the ipsocentric method gives, in a well-defined sense, the orbital contributions that are best for purposes of interpretation. The general theory is illustrated by maps for a set of annelated pentalenes; the known benzopentalene (1) and 1,2:4,5-dibenzopentalene (2), the still unknown isomer of 2, 1,2:5,6-dibenzopentalene (3), and cyclopent[b,c]acenaphthylene (4), an unknown isomer of pyracylene, all of which consist of fusions of formally aromatic and anti-aromatic pi-conjugated systems.

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