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Mikrobiologiia ; 85(5): 522-530, 2016 Sep.
Article de Anglais | MEDLINE | ID: mdl-29364600

RÉSUMÉ

Bacterial mats formed by a colorless sulfur bacterium Thioploca sp. in the area of the Posolski Bank cold methane seep (southern Baikal) were -studied using electron microscopy and phylogenetic analysis. Morphologically the bacteria were identified as Thioploca ingrica.- Confocal microscopy of DAPI-stained samples revealed numerous rod-shaped, filamentous, and spiral microorganisms in the sheaths, as well as in- side and between the trichomes. Transmission electron microscopy revealed nonvacuolated bacteria and small cells-without cell envelopes within the sheath. Bacteria with pronounced intracytoplasmic membranes characteristic; of type I methanotrophs were observed at the outer side of the sheath. Based on analysis of the 16S rRNA gene sequences, the following phyla were idenified in the sheath community: Bacteroidetes, Nitro- spira, Chloroflexi, Planctomycetes, Verrucomicrobia,'y-, and 6-Proteobacteria, Euryarchaeota, Crenarchaeota, and Thaumarchaeota, as well as anammox bacteria. A hypothetical scheme of matter flows in the Lake Baikal bacterial mats was proposed based on the data on metabolism of the cultured homologues.


Sujet(s)
Nappe phréatique/microbiologie , Lacs/microbiologie , Consortiums microbiens/physiologie , ARN ribosomique 16S/génétique , Thiotrichaceae/génétique , Bacteroidetes/classification , Bacteroidetes/génétique , Bacteroidetes/isolement et purification , Chloroflexi/classification , Chloroflexi/génétique , Chloroflexi/isolement et purification , Crenarchaeota/classification , Crenarchaeota/génétique , Crenarchaeota/isolement et purification , Écosystème , Euryarchaeota/classification , Euryarchaeota/génétique , Euryarchaeota/isolement et purification , Méthane/composition chimique , Méthane/métabolisme , Phylogenèse , Planctomycetales/classification , Planctomycetales/génétique , Planctomycetales/isolement et purification , Proteobacteria/classification , Proteobacteria/génétique , Proteobacteria/isolement et purification , Sibérie , Thiotrichaceae/classification , Thiotrichaceae/isolement et purification , Thiotrichaceae/ultrastructure , Verrucomicrobia/classification , Verrucomicrobia/génétique , Verrucomicrobia/isolement et purification
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