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1.
J Feline Med Surg ; 26(8): 1098612X241256473, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-39212426

RÉSUMÉ

OBJECTIVES: Mammary tumours in cats are biologically aggressive. The standard of care relies upon wide surgical resection. Chemotherapy has been described in the macroscopic disease setting; however, limited efficacy has been shown. The aim of this study was to assess the efficacy of toceranib phosphate in macroscopic feline mammary tumours (FMTs). METHODS: A total of 17 cats with cytologically or histopathologically confirmed mammary adenocarcinoma (gross disease) were prospectively enrolled. Toceranib phosphate was administered at a median dose of 2.77 mg/kg (range 2.3-3.2) PO q48 h. No corticosteroids or non-steroidal anti-inflammatory drugs (NSAIDs) were administered. Toxicity was graded according to Veterinary Cooperative Oncology Group-Common Terminology Criteria for Adverse Events (VCOG-CTCAE) v1.1 criteria. The response was assessed after 1 month, following Response Evaluation Criteria In Solid Tumours (RECIST) criteria. RESULTS: Toxicity was observed in eight cats, with most instances being grade 1 or 2, which were managed with supportive care. Only one cat experienced grade 3 toxicity (anorexia), which resolved after a dose reduction. Clinical benefit was seen in 12 (64.7%) cats and an objective response was seen in six (35.2%) cats. One cat experienced complete response, five had partial response, six had stable disease and five had progressive disease. One cat showed distant progression (malignant pleural effusion) despite continued partial remission of the primary tumour. The median progression-free survival and median overall survival time were 91 days (range 30-158) and 145 days (range 31-234), respectively. CONCLUSIONS AND RELEVANCE: Toceranib phosphate showed clinical benefit and a good safety profile in advanced or recurrent FMTs, offering a new alternative in the treatment of this disease; however, further prospective and randomised studies are required to further assess its efficacy. Interestingly, one cat developed distant metastases while the primary tumour showed partial response, suggesting that primary tumour and metastatic disease may not sustain the same sensitivity to toceranib.


Sujet(s)
Adénocarcinome , Antinéoplasiques , Maladies des chats , Indoles , Tumeurs mammaires de l'animal , Pyrroles , Chats , Animaux , Maladies des chats/traitement médicamenteux , Tumeurs mammaires de l'animal/traitement médicamenteux , Femelle , Indoles/usage thérapeutique , Indoles/effets indésirables , Pyrroles/usage thérapeutique , Pyrroles/effets indésirables , Antinéoplasiques/usage thérapeutique , Antinéoplasiques/effets indésirables , Adénocarcinome/médecine vétérinaire , Adénocarcinome/traitement médicamenteux , Résultat thérapeutique , Études prospectives
2.
Front Public Health ; 11: 1098965, 2023.
Article de Anglais | MEDLINE | ID: mdl-36778569

RÉSUMÉ

To investigate the influence of geographic constrains to mobility on SARS-CoV-2 circulation before the advent of vaccination, we recently characterized the occurrence in Sicily of viral lineages in the second pandemic wave (September to December 2020). Our data revealed wide prevalence of the then widespread through Europe B.1.177 variant, although some viral samples could not be classified with the limited Sanger sequencing tools used. A particularly interesting sample could not be fitted to a major variant then circulating in Europe and has been subjected here to full genome sequencing in an attempt to clarify its origin, lineage and relations with the seven full genome sequences deposited for that period in Sicily, hoping to provide clues on viral evolution. The obtained genome is unique (not present in databases). It hosts 20 single-base substitutions relative to the original Wuhan-Hu-1 sequence, 8 of them synonymous and the other 12 encoding 11 amino acid substitutions, all of them already reported one by one. They include four highly prevalent substitutions, NSP12:P323L, S:D614G, and N:R203K/G204R; the much less prevalent S:G181V, ORF3a:G49V and N:R209I changes; and the very rare mutations NSP3:L761I, NSP6:S106F, NSP8:S41F and NSP14:Y447H. GISAID labeled this genome as B.1.1 lineage, a lineage that appeared early on in the pandemic. Phylogenetic analysis also confirmed this lineage diagnosis. Comparison with the seven genome sequences deposited in late 2020 from Sicily revealed branching leading to B.1.177 in one branch and to Alpha in the other branch, and suggested a local origin for the S:G118V mutation.


Sujet(s)
COVID-19 , Évolution moléculaire , Génome viral , SARS-CoV-2 , Humains , Cartographie chromosomique , COVID-19/épidémiologie , COVID-19/virologie , Phylogenèse , SARS-CoV-2/génétique , Sicile/épidémiologie
3.
Animals (Basel) ; 14(1)2023 Dec 31.
Article de Anglais | MEDLINE | ID: mdl-38200871

RÉSUMÉ

In the setting of the recent COVID-19 pandemic, transmission of SARS-CoV-2 to animals has been reported in both domestic and wild animals and is a matter of concern. Given the genetic and functional similarities to humans, non-human primates merit particular attention. In the case of lemurs, generally considered endangered, they are believed to be susceptible to SARS-CoV-2 infection. We have conducted a study for evidence of SARS-CoV-2 infection among the 43 lemurs of Mundomar, a zoological park in Benidorm, Spain. They belong to two endangered lemur species, 23 black-and-white ruffed lemurs (Varecia variegata) and 20 ring-tailed lemurs (Lemur catta). Health assessments conducted in 2022 and 2023 included molecular analyses for SARS-CoV-2 RNA of oral and rectal swabs using two different RT-qPCR assays, always with negative results for SARS-CoV-2 in all animals. The assessment also included serological testing for antibodies against the receptor-binding domain (RBD) of the spike protein (S) of SARS-CoV-2, which again yielded negative results in all animals except one black-and-white ruffed lemur, supporting prior infection of that animal with SARS-CoV-2. Our data, while not indicating a high susceptibility of lemurs to SARS-CoV-2 infection, show that they can be infected, adding to the existing information body on potential ways for SARS-CoV-2 virus spreading in zoos, highlighting the need for animal surveillance for the virus.

4.
BMC Vet Res ; 18(1): 370, 2022 Oct 12.
Article de Anglais | MEDLINE | ID: mdl-36224622

RÉSUMÉ

BACKGROUND: Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causative agent of COVID-19, has infected several animal species, including dogs, presumably via human-to-animal transmission. Most infected dogs reported were asymptomatic, with low viral loads. However, in this case we detected SARS-CoV-2 in a dog from the North African coastal Spanish city of Ceuta presenting hemorrhagic diarrhea, a disease also reported earlier on in an infected dog from the USA. CASE PRESENTATION: In early January 2021, a West Highland Terrier pet dog from Ceuta (Spain) presented hemorrhagic diarrhea with negative tests for candidate microbial pathogens. Since the animal was in a household whose members suffered SARS-CoV-2 in December 2020, dog feces were analyzed for SARS-CoV-2, proving positive in a two-tube RT-PCR test, with confirmation by sequencing a 399-nucleotide region of the spike (S) gene. Furthermore, next-generation sequencing (NGS) covered > 90% SARS-CoV-2 genome sequence, allowing to classify it as variant B.1.177. Remarkably, the sequence revealed the Ile402Val substitution in the spike protein (S), of potential concern because it mapped in the receptor binding domain (RBD) that mediates virus interaction with the cell. NGS reads mapping to bacterial genomes showed that the dog fecal microbiome fitted best the characteristic microbiome of dog's acute hemorrhagic diarrhea. CONCLUSION: Our findings exemplify dog infection stemming from the human SARS-CoV-2 pandemic, providing nearly complete-genome sequencing of the virus, which is recognized as belonging to the B.1.177 variant, adding knowledge on variant circulation in a geographic region and period for which there was little viral variant characterization. A single amino acid substitution found in the S protein that could have been of concern is excluded to belong to this category given its rarity and intrinsic nature. The dog's pathology suggests that SARS-CoV-2 could affect the gastrointestinal tract of the dog.


Sujet(s)
COVID-19 , Maladies des chiens , Animaux , COVID-19/médecine vétérinaire , Diarrhée/médecine vétérinaire , Maladies des chiens/diagnostic , Chiens , Humains , Nucléotides , SARS-CoV-2/génétique , Glycoprotéine de spicule des coronavirus/génétique
5.
Front Microbiol ; 13: 869559, 2022.
Article de Anglais | MEDLINE | ID: mdl-35558104

RÉSUMÉ

After 2 years of the COVID-19 pandemic, we continue to face vital challenges stemming from SARS-CoV-2 variation, causing changes in disease transmission and severity, viral adaptation to animal hosts, and antibody/vaccine evasion. Since the monitoring, characterization, and cataloging of viral variants are important and the existing information on this was scant for Sicily, this pilot study explored viral variants circulation on this island before and in the growth phase of the second wave of COVID-19 (September and October 2020), and in the downslope of that wave (early December 2020) through sequence analysis of 54 SARS-CoV-2-positive samples. The samples were nasopharyngeal swabs collected from Sicilian residents by a state-run one-health surveillance laboratory in Palermo. Variant characterization was based on RT-PCR amplification and sequencing of four regions of the viral genome. The B.1.177 variant was the most prevalent one, strongly predominating before the second wave and also as the wave downsized, although its relative prevalence decreased as other viral variants, particularly B.1.160, contributed to virus circulation. The occurrence of the B.1.160 variant may have been driven by the spread of that variant in continental Europe and by the relaxation of travel restrictions in the summer of 2020. No novel variants were identified. As sequencing of the entire viral genome in Sicily for the period covered here was restricted to seven deposited viral genome sequences, our results shed some light on SARS-CoV-2 variant circulation during that wave in this insular region of Italy which combines its partial insular isolation with being a major entry point for the African immigration.

6.
Front Vet Sci ; 9: 826991, 2022.
Article de Anglais | MEDLINE | ID: mdl-35433914

RÉSUMÉ

Animals have been involved in the three known outbreaks of severe respiratory syndromes due to coronaviruses (years 2005, 2012, and 2019). The pandemic nature of the SARS-CoV-2 outbreak increases the likelihood of infection from humans of susceptible animal species that, thus, could become secondary viral hosts and even disease reservoirs. We present evidence of spillover infection of wild mustelids by reporting the presence of SARS-CoV-2 in a Eurasian river otter found near a water reservoir in the Valencian Community (Spain). We detected the virus using two different commercial RTqPCR assays on RNA extracted from the nasopharynx (swabbing) and from lung tissue and mediastinal lymph node homogenates. The corresponding samples from two additional otters from distant sites tested negative in identical assays. The diagnosis in the positive otter was confirmed by two-tube RT-PCR assay in which RNA was first retrotranscribed, and then specific regions of the spike (S), nucleocapsid (N), and ORF10 genes were separately amplified from the produced cDNA, followed by electrophoretic visualization and Sanger sequencing. The sequences of the amplified products revealed some non-synonymous changes in the N and ORF10 partial sequences, relative to the consensus sequence. These changes, identified already in human patient samples, point to human origin of the virus, although their specific combination was unique. These findings, together with our previous report of SARS-CoV-2 infection of feral American mink, highlight the need for SARS-CoV-2 surveillance of wild or feral mustelids to evaluate the risk that these animals could become SARS-CoV-2 reservoirs.

7.
Animals (Basel) ; 11(5)2021 May 16.
Article de Anglais | MEDLINE | ID: mdl-34065657

RÉSUMÉ

Severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2), the causal agent of COVID-19, is considered a pathogen of animal origin that is mainly transmitted from human to human. Several animal species can be naturally or experimentally infected by SARS-CoV-2, with compelling evidence that mink is highly susceptible to SARS-CoV-2 infection. Human-to-mink infection cases have been reported and there are also suggestions that mink-to-human infection occurs. Mink infections have been reported to date only on fur farms, except for one infected free- ranging wild mink near a Utah (USA) fur farm, which suggests a transmission pathway from farms to wild mink. We now report the detection of SARS-CoV-2 in 2 of 13 feral dark brown American mink (Neovison vison) trapped in the Valencian Community (Eastern Spain), during an invasive species trapping campaign. They were trapped in riverbeds in sparsely inhabited rural areas known to harbor self-sustained feral mink populations. The closest fur farm is about 20 km away. SARS-CoV-2 RNA was detected by two-step RT-PCR in these animals' mesenteric lymph nodes and was confirmed by sequencing a 397-nucleotide amplified region of the S gene, yielding identical sequences in both animals. A molecular phylogenetic analysis was run on this sequence, which was found to correspond to the consensus SARS-CoV-2 sequence from Wuhan. Our findings appear to represent the first example of SARS-CoV-2 acquired in the wild by feral mink in self-sustained populations.

8.
Sci Rep ; 7(1): 11234, 2017 09 11.
Article de Anglais | MEDLINE | ID: mdl-28894239

RÉSUMÉ

The trimeric staphylococcal phage-encoded dUTPases (Duts) are signalling molecules that induce the cycle of some Staphylococcal pathogenicity islands (SaPIs) by binding to the SaPI-encoded Stl repressor. To perform this regulatory role, these Duts require an extra motif VI, as well as the Dut conserved motifs IV and V. While the apo form of Dut is required for the interaction with the Stl repressor, usually only those Duts with normal enzymatic activity can induce the SaPI cycle. To understand the link between the enzymatic activities and inducing capacities of the Dut protein, we analysed the structural, biochemical and physiological characteristics of the Dut80α D95E mutant, which loses the SaPI cycle induction capacity despite retaining enzymatic activity. Asp95 is located at the threefold central channel of the trimeric Dut where it chelates a divalent ion. Here, using state-of-the-art techniques, we demonstrate that D95E mutation has an epistatic effect on the motifs involved in Stl binding. Thus, ion binding in the central channel correlates with the capacity of motif V to twist and order in the SaPI-inducing disposition, while the tip of motif VI is disturbed. These alterations in turn reduce the affinity for the Stl repressor and the capacity to induce the SaPI cycle.


Sujet(s)
Ilots génomiques , Pyrophosphatases/métabolisme , Phages de Staphylococcus/enzymologie , Activation de la transcription , Facteurs de virulence/biosynthèse , Analyse de mutations d'ADN , Protéines mutantes/génétique , Protéines mutantes/métabolisme , Mutation faux-sens , Liaison aux protéines , Pyrophosphatases/génétique , Protéines de répression/métabolisme
9.
PLoS Pathog ; 13(9): e1006581, 2017 Sep.
Article de Anglais | MEDLINE | ID: mdl-28892519

RÉSUMÉ

The dUTPase (Dut) enzymes, encoded by almost all free-living organisms and some viruses, prevent the misincorporation of uracil into DNA. We previously proposed that trimeric Duts are regulatory proteins involved in different cellular processes; including the phage-mediated transfer of the Staphylococcus aureus pathogenicity island SaPIbov1. Recently, it has been shown that the structurally unrelated dimeric Dut encoded by phage ϕNM1 is similarly able to mobilize SaPIbov1, suggesting dimeric Duts could also be regulatory proteins. How this is accomplished remains unsolved. Here, using in vivo, biochemical and structural approaches, we provide insights into the signaling mechanism used by the dimeric Duts to induce the SaPIbov1 cycle. As reported for the trimeric Duts, dimeric Duts contain an extremely variable region, here named domain VI, which is involved in the regulatory capacity of these enzymes. Remarkably, our results also show that the dimeric Dut signaling mechanism is modulated by dUTP, as with the trimeric Duts. Overall, our results demonstrate that although unrelated both in sequence and structure, dimeric and trimeric Duts control SaPI transfer by analogous mechanisms, representing a fascinating example of convergent evolution. This conserved mode of action highlights the biological significance of Duts as regulatory molecules.


Sujet(s)
Multimérisation de protéines , Pyrophosphatases/métabolisme , Staphylococcus aureus/enzymologie , Séquence d'acides aminés/physiologie , Bactériophages/effets des médicaments et des substances chimiques , Bactériophages/génétique , Sites de fixation/physiologie , Nucléotides désoxyuridyliques/métabolisme , Ilots génomiques , Protéines de répression/métabolisme , Transduction du signal/effets des médicaments et des substances chimiques
10.
Elife ; 62017 08 08.
Article de Anglais | MEDLINE | ID: mdl-28826473

RÉSUMÉ

Targeting conserved and essential processes is a successful strategy to combat enemies. Remarkably, the clinically important Staphylococcus aureus pathogenicity islands (SaPIs) use this tactic to spread in nature. SaPIs reside passively in the host chromosome, under the control of the SaPI-encoded master repressor, Stl. It has been assumed that SaPI de-repression is effected by specific phage proteins that bind to Stl, initiating the SaPI cycle. Different SaPIs encode different Stl repressors, so each targets a specific phage protein for its de-repression. Broadening this narrow vision, we report here that SaPIs ensure their promiscuous transfer by targeting conserved phage mechanisms. This is accomplished because the SaPI Stl repressors have acquired different domains to interact with unrelated proteins, encoded by different phages, but in all cases performing the same conserved function. This elegant strategy allows intra- and inter-generic SaPI transfer, highlighting these elements as one of nature's most fascinating subcellular parasites.


Sujet(s)
Transfert horizontal de gène , Ilots génomiques , Séquences répétées dispersées , Staphylococcus aureus/génétique , Staphylococcus aureus/virologie , Transduction génétique , Régulation de l'expression des gènes bactériens , Interactions hôte-parasite , Protéines de répression/métabolisme , Phages de Staphylococcus , Protéines virales/métabolisme
11.
Nucleic Acids Res ; 44(11): 5457-69, 2016 06 20.
Article de Anglais | MEDLINE | ID: mdl-27112567

RÉSUMÉ

We have recently proposed that the trimeric staphylococcal phage encoded dUTPases (Duts) are signaling molecules that act analogously to eukaryotic G-proteins, using dUTP as a second messenger. To perform this regulatory role, the Duts require their characteristic extra motif VI, present in all the staphylococcal phage coded trimeric Duts, as well as the strongly conserved Dut motif V. Recently, however, an alternative model involving Duts in the transfer of the staphylococcal islands (SaPIs) has been suggested, questioning the implication of motifs V and VI. Here, using state-of the-art techniques, we have revisited the proposed models. Our results confirm that the mechanism by which the Duts derepress the SaPI cycle depends on dUTP and involves both motifs V and VI, as we have previously proposed. Surprisingly, the conserved Dut motif IV is also implicated in SaPI derepression. However, and in agreement with the proposed alternative model, the dUTP inhibits rather than inducing the process, as we had initially proposed. In summary, our results clarify, validate and establish the mechanism by which the Duts perform regulatory functions.


Sujet(s)
Multimérisation de protéines , Pyrophosphatases/composition chimique , Pyrophosphatases/métabolisme , Staphylococcus aureus/enzymologie , Motifs d'acides aminés , Séquence d'acides aminés , Protéines bactériennes/composition chimique , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Sites de fixation , Domaine catalytique , Ilots génomiques , Liaison aux protéines , Conformation des protéines , Motifs et domaines d'intéraction protéique , Pyrophosphatases/génétique , Protéines de fusion recombinantes/métabolisme , Staphylococcus aureus/génétique , Relation structure-activité
12.
FEMS Microbiol Ecol ; 91(4)2015 Apr.
Article de Anglais | MEDLINE | ID: mdl-25764470

RÉSUMÉ

The gut microbiota of insects contributes positively to the physiology of its host mainly by participating in food digestion, protecting against pathogens, or provisioning vitamins or amino acids, but the dynamics of this complex ecosystem is not well understood so far. In this study, we have characterized the gut microbiota of the omnivorous cockroach Blattella germanica by pyrosequencing the hypervariable regions V1-V3 of the 16S rRNA gene of the whole bacterial community. Three diets differing in the protein content (0, 24 and 50%) were tested at two time points in lab-reared individuals. In addition, the gut microbiota of wild adult cockroaches was also analyzed. In contrast to the high microbial richness described on the studied samples, only few species are shared by wild and lab-reared cockroaches, constituting the bacterial core in the gut of B. germanica. Overall, we found that the gut microbiota of B. germanica is highly dynamic as the bacterial composition was reassembled in a diet-specific manner over a short time span, with no-protein diet promoting high diversity, although the highest diversity was found in the wild cockroaches analyzed. We discuss how the flexibility of the gut microbiota is probably due to its omnivorous life style and varied diets.


Sujet(s)
Bacteroidetes/génétique , Blattes/microbiologie , Tube digestif/microbiologie , Peptococcaceae/génétique , Proteobacteria/génétique , Adulte , Animaux , Bacteroidetes/isolement et purification , Séquence nucléotidique , Biodiversité , ADN bactérien/génétique , Régime alimentaire , Digestion/physiologie , Humains , Microbiote/génétique , Peptococcaceae/isolement et purification , Phylogenèse , Proteobacteria/isolement et purification , ARN ribosomique 16S/génétique , Analyse de séquence d'ADN
13.
J Bacteriol ; 192(20): 5402-12, 2010 Oct.
Article de Anglais | MEDLINE | ID: mdl-20709900

RÉSUMÉ

Using an oligonucleotide microarray, we searched for previously unrecognized transcription units in intergenic regions in the genome of Bacillus subtilis, with an emphasis on identifying small genes activated during spore formation. Nineteen transcription units were identified, 11 of which were shown to depend on one or more sporulation-regulatory proteins for their expression. A high proportion of the transcription units contained small, functional open reading frames (ORFs). One such newly identified ORF is a member of a family of six structurally similar genes that are transcribed under the control of sporulation transcription factor σ(E) or σ(K). A multiple mutant lacking all six genes was found to sporulate with slightly higher efficiency than the wild type, suggesting that under standard laboratory conditions the expression of these genes imposes a small cost on the production of heat-resistant spores. Finally, three of the transcription units specified small, noncoding RNAs; one of these was under the control of the sporulation transcription factor σ(E), and another was under the control of the motility sigma factor σ(D).


Sujet(s)
Bacillus subtilis/génétique , Protéines bactériennes/métabolisme , Régulation de l'expression des gènes bactériens/physiologie , Spores bactériens/physiologie , Protéines bactériennes/génétique , Séquence nucléotidique , Gènes bactériens , Génome bactérien , Données de séquences moléculaires , Cadres ouverts de lecture , ARN messager/génétique , ARN messager/métabolisme , Facteur sigma/génétique , Facteur sigma/métabolisme
14.
J Bacteriol ; 190(7): 2434-40, 2008 Apr.
Article de Anglais | MEDLINE | ID: mdl-18223072

RÉSUMÉ

Staphylococcus aureus pathogenicity islands (SaPIs) have an intimate relationship with temperate staphylococcal phages. During phage growth, SaPIs are induced to replicate and are efficiently encapsidated into special small phage heads commensurate with their size. We have analyzed by amino acid sequencing and mass spectrometry the protein composition of the specific SaPI particles. This has enabled identification of major capsid and tail proteins and a putative portal protein. As expected, all these proteins were phage encoded. Additionally, these analyses suggested the existence of a protein required for the formation of functional phage but not SaPI particles. Mutational analysis demonstrated that the phage proteins identified were involved only in the formation and possibly the function of SaPI or phage particles, having no role in other SaPI or phage functions.


Sujet(s)
Ilots génomiques/génétique , Phages de Staphylococcus/génétique , Staphylococcus aureus/génétique , Staphylococcus aureus/virologie , Protéines virales/génétique , ADN bactérien/génétique , Test de complémentation , Microscopie électronique , Mutation , Phages de Staphylococcus/métabolisme , Phages de Staphylococcus/ultrastructure , Spectrométrie de masse en tandem , Protéines virales/métabolisme
15.
Mol Microbiol ; 67(3): 493-503, 2008 Feb.
Article de Anglais | MEDLINE | ID: mdl-18086210

RÉSUMÉ

The SaPIs are chromosomal islands in staphylococci and other Gram-positive bacteria that carry genes for superantigens, virulence factors, resistance and certain metabolic functions. They have intimate relationships with certain temperate phages involving phage-induced excision, replication and efficient packaging in special small-headed infective phage-like particles, resulting in very high transfer frequencies. They generally contain 18-22 ORFs. We have systematically inactivated each of these ORFs and determined their functional groupings. In other reports, we have shown that five are involved in excision/integration, replication and packaging. In this report, we summarize the mutational analysis and focus on two key ORFs involved in regulation of the SaPI excision-replication-packaging cycle vis-à-vis phage induction. These two genes are divergently transcribed and define the major transcriptional organization of the SaPI genome. One of them, stl, encodes a master repressor, possibly analogous to the standard cI phage repressor. Mutational inactivation of this gene results in SaPI excision and replication in the absence of any inducing phage. This replicated SaPI DNA is not packaged; however, since the capsid components are provided by the helper phage. We have not yet ascertained any specific function for the second putative regulatory gene, though it is highly conserved among the SaPIs.


Sujet(s)
Réplication de l'ADN , Transfert horizontal de gène , Ilots génomiques , Mutation , Staphylococcus/génétique , Bactériophages/génétique , Empaquetage de l'ADN , Délétion de gène , Virus assistants/génétique , Cadres ouverts de lecture , Recombinaison génétique , Protéines de répression/génétique , Protéines virales/génétique , Activation virale
16.
Mol Microbiol ; 65(1): 41-50, 2007 Jul.
Article de Anglais | MEDLINE | ID: mdl-17581119

RÉSUMÉ

Transfer of Staphylococcus aureus pathogenicity islands (SaPIs) is directly controlled by the cellular repressor LexA. We have found that transcription of the SaPIbov1 operon I is repressed by LexA and is therefore SOS-induced. Two copies of the LexA binding site consensus (Cheo box) are present in the 5' region of this operon, at the same location in all of 15 different SaPIs analysed. Both of these boxes bind LexA protein. Furthermore, replacement of the chromosomal lexA with a non-cleavable mutant LexA (G94E) greatly diminished expression of SaPIbov1 operon I and differentially reduced the production of SaPI transducing particles in comparison with the production of plaque-forming particles. In concordance with this finding, deletion of operon I blocked the formation of SaPI transducing particles but had no effect on replication of the island. Operon I contains a gene encoding a homologue of the phage terminase small subunit plus two other genes that direct the assembly of the small sized SaPIbov1 capsids. Interestingly, mutations affecting the latter two genes were not defective in SaPI transfer, but rather encapsidated the island in full-sized phage heads, which would have to contain a multimeric SaPI genome.


Sujet(s)
Protéines bactériennes/métabolisme , Régulation de l'expression des gènes bactériens , Ilots génomiques , Opéron , , Serine endopeptidases/métabolisme , Staphylococcus aureus/métabolisme , Protéines bactériennes/génétique , Séquence nucléotidique , Endodeoxyribonucleases/génétique , Lysogénie , Données de séquences moléculaires , Phages de Staphylococcus/enzymologie , Phages de Staphylococcus/génétique , Staphylococcus aureus/génétique , Staphylococcus aureus/pathogénicité , Staphylococcus aureus/virologie , Activation virale
17.
J Bacteriol ; 189(15): 5608-16, 2007 Aug.
Article de Anglais | MEDLINE | ID: mdl-17545290

RÉSUMÉ

SaPIbov2 is a member of the SaPI family of staphylococcal pathogenicity islands and is very closely related to SaPIbov1. Typically, certain temperate phages can induce excision and replication of one or more of these islands and can package them into special small phage-like particles commensurate with their genome sizes (referred to as the excision-replication-packaging [ERP] cycle). We have studied the phage-SaPI interaction in some depth using SaPIbov2, with special reference to the role of its integrase. We demonstrate here that SaPIbov2 can be induced to replicate by different staphylococcal phages. After replication, SaPIbov2 is efficiently encapsidated and transferred to recipient organisms, including different non-Staphylococcus aureus staphylococci, where it integrates at a SaPI-specific attachment site, att(C), by means of a self-coded integrase (Int). Phages that cannot induce the SaPIbov2 ERP cycle can transfer the island by recA-dependent classical generalized transduction and can also transfer it by a novel mechanism that requires the expression of SaPIbov2 int in the recipient but not in the donor. It is suggested that this mechanism involves the encapsidation of standard transducing fragments containing the intact island followed by int-mediated excision, circularization, and integration in the recipient.


Sujet(s)
Transfert horizontal de gène , Ilots génomiques/génétique , Integrases/génétique , Phages de Staphylococcus/génétique , Staphylococcus aureus/génétique , Transduction génétique , Empaquetage de l'ADN , Réplication de l'ADN , ADN bactérien/génétique , ADN bactérien/métabolisme , Test de complémentation , Integrases/métabolisme , Rec A Recombinases/métabolisme , Recombinaison génétique , Staphylococcus aureus/virologie
18.
Microbiology (Reading) ; 153(Pt 6): 1702-1710, 2007 Jun.
Article de Anglais | MEDLINE | ID: mdl-17526828

RÉSUMÉ

A process of phase variation is described that affects the expression of Bap (biofilm-associated protein) in Staphylococcus aureus. Upon subculture of the Bap-positive S. aureus strain V329 on Congo red agar, spontaneous smooth biofilm-negative colonies appeared at a low frequency (5 x 10(-4)). Northern blot analysis of these variants with a bap-specific gene probe showed that transcription of the bap gene did not occur. However, DNA typing, Southern blot hybridization and DNA sequencing did not show any differences between the parent V329 strain and the biofilm-negative variants. The biofilm-negative phenotype reverted to wild-type at a similar frequency upon subculture of Bap-negative variants in liquid media. Experimental infection of ovine mammary glands with Bap-negative variants showed that phase variation occurred in vivo, because Bap-expressing, biofilm-positive revertants were isolated from infected mammary glands. The absence of Bap correlated with increased adherence to fibrinogen and fibronectin. It is possible that S. aureus can detach from a biofilm by switching to a Bap-negative state.


Sujet(s)
Protéines bactériennes/génétique , Biofilms/croissance et développement , Régulation de l'expression des gènes bactériens , Staphylococcus aureus/croissance et développement , Animaux , Adhérence bactérienne , Technique de Northern , Technique de Southern , ADN bactérien/génétique , Modèles animaux de maladie humaine , Fibrinogène/métabolisme , Fibronectines/métabolisme , Glandes mammaires animales/microbiologie , Polymorphisme de restriction , ARN bactérien/génétique , ARN messager/génétique , Analyse de séquence d'ADN , Ovis , Infections à staphylocoques/microbiologie , Staphylococcus aureus/génétique , Staphylococcus aureus/métabolisme
19.
J Bacteriol ; 188(7): 2726-9, 2006 Apr.
Article de Anglais | MEDLINE | ID: mdl-16547063

RÉSUMÉ

Antibiotics that interfere with DNA replication and cell viability activate the SOS response. In Staphylococcus aureus, the antibiotic-induced SOS response promotes replication and high-frequency horizontal transfer of pathogenicity island-encoded virulence factors. Here we report that beta-lactams induce a bona fide SOS response in S. aureus, characterized by the activation of the RecA and LexA proteins, the two master regulators of the SOS response. Moreover, we show that beta-lactams are capable of triggering staphylococcal prophage induction in S. aureus lysogens. Consequently, and as previously described for SOS induction by commonly used fluoroquinolone antibiotics, beta-lactam-mediated phage induction also resulted in replication and high-frequency transfer of the staphylococcal pathogenicity islands, showing that such antibiotics may have the unintended consequence of promoting the spread of bacterial virulence factors.


Sujet(s)
Antibactériens/pharmacologie , Transfert horizontal de gène/effets des médicaments et des substances chimiques , /effets des médicaments et des substances chimiques , Staphylococcus aureus/effets des médicaments et des substances chimiques , Facteurs de virulence/métabolisme , bêta-Lactames/pharmacologie , Ampicilline/pharmacologie , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Régulation de l'expression des gènes bactériens , Pénicillines/pharmacologie , Rec A Recombinases/génétique , Rec A Recombinases/métabolisme , Serine endopeptidases/génétique , Serine endopeptidases/métabolisme , Staphylococcus aureus/génétique , Staphylococcus aureus/métabolisme , Facteurs de virulence/génétique
20.
Mol Microbiol ; 56(3): 836-44, 2005 May.
Article de Anglais | MEDLINE | ID: mdl-15819636

RÉSUMÉ

Although mobile genetic elements have a crucial role in spreading pathogenicity-determining genes among bacterial populations, environmental and genetic factors involved in the horizontal transfer of these genes are largely unknown. Here we show that SaPIbov1, a Staphylococcus aureus pathogenicity island that belongs to the growing family of these elements that are found in many strains, is induced to excise and replicate after SOS induction of at least three different temperate phages, 80alpha, phi11 and phi147, and is then packaged into phage-like particles and transferred at high frequency. SOS induction by commonly used fluoroquinolone antibiotics, such as ciprofloxacin, also results in replication and high-frequency transfer of this element, as well as of SaPI1, the prototypical island of S. aureus, suggesting that such antibiotics may have the unintended consequence of promoting the spread of bacterial virulence factors. Although the strains containing these prophages do not normally contain SaPIs, we have found that RF122-1, the original SaPIbov1-containing clinical isolate, contains a putative second pathogenicity island that is replicated after SOS induction, by antibiotic treatment, of the prophage(s) present in the strain. Although SaPIbov1 is not induced to replicate after SOS induction in this strain, it is transferred by the antibiotic-activated phages. We conclude that SOS induction by therapeutic agents can promote the spread of staphylococcal virulence genes.


Sujet(s)
Antibactériens/pharmacologie , Ilots génomiques/génétique , /effets des médicaments et des substances chimiques , Staphylococcus aureus/physiologie , Facteurs de virulence/génétique , Séquence nucléotidique , Ciprofloxacine/pharmacologie , Multirésistance bactérienne aux médicaments/génétique , Transfert horizontal de gène , Ilots génomiques/effets des médicaments et des substances chimiques , Données de séquences moléculaires , Phages de Staphylococcus/effets des médicaments et des substances chimiques , Phages de Staphylococcus/génétique , Staphylococcus aureus/effets des médicaments et des substances chimiques , Staphylococcus aureus/pathogénicité
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