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2.
Biol Trace Elem Res ; 200(5): 2008-2015, 2022 May.
Article de Anglais | MEDLINE | ID: mdl-34245425

RÉSUMÉ

Tobacco use has a negative impact on health due to its relationship with the development of high-mortality diseases, such as pulmonary cancer. However, the effect of cadmium (Cd), present in tobacco smoke, on the development of joint diseases has been scarcely studied. The objective of this review is to discuss the evidence regarding the mechanisms by which Cd exposure, through tobacco smoke, may lead to the development of osteoarthritis (OA), osteoporosis (OP), and rheumatoid arthritis (RA). There's evidence suggesting a string association between moderate to severe OA development and tobacco use, and that a higher blood concentration of Cd can trigger oxidative stress (OS) and inflammation, favoring cartilage loss. At the bone level, the Cd that is inhaled through tobacco smoke affects bone mineral density, resulting in OP mediated by a decrease in the antioxidant enzymes, which favors the bone resorption process. In RA, tobacco use promotes the citrullination process through Cd exposure and increases OS and inflammation. Understanding how tobacco use can increase the damage at the articular level mediated by a toxic metal, i.e., Cd, is important. Finally, we propose prevention, control, and treatment strategies for frequently disabling diseases, such as OA, OP, and RA to reduce its prevalence in the population.


Sujet(s)
Polyarthrite rhumatoïde , Maladies ostéomusculaires , Arthrose , Ostéoporose , Pollution par la fumée de tabac , Cadmium/toxicité , Humains , Inflammation , Nicotiana/effets indésirables , Usage de tabac
3.
J Appl Microbiol ; 131(5): 2223-2234, 2021 Nov.
Article de Anglais | MEDLINE | ID: mdl-33876507

RÉSUMÉ

AIMS: Increases in antimicrobial resistance have meant that the antimicrobial potential of lantibiotics is now being investigated irrespective of the nature of the producing organism. The aim of this study was to investigate whether natural nisin variants produced by non-Generally Recognized as Safe (GRAS) strains, such as nisin H, nisin J and nisin P, could be expressed in a well-characterized GRAS host. METHODS AND RESULTS: This study involved cloning the nisin A promoter and leader sequence fused to nisin H, nisin J or nisin P structural gene sequences originally produced by Streptococcus hyointestinalis DPC 6484, Staphylococcus capitis APC 2923 and Streptococcus agalactiae DPC 7040, respectively. This resulted in their expression in Lactococcus lactis NZ9800, a genetically modified strain that does not produce nisin A. CONCLUSIONS: Induction of the nisin controlled gene expression system demonstrates that these three nisin variants could be acted on by nisin A machinery provided by the host strain. SIGNIFICANCE AND IMPACT OF THE STUDY: Describes the first successful heterologous production of three natural nisin variants by a GRAS strain, and demonstrates how such systems could be harnessed not only for lantibiotic production but also in the expansion of their structural diversity and development for use as future biotherapeutics.


Sujet(s)
Bactériocines , Lactococcus lactis , Nisine , Antibactériens/pharmacologie , Nisine/génétique , Nisine/pharmacologie , Staphylococcus/génétique , Streptococcus , Streptococcus agalactiae
4.
J Trace Elem Med Biol ; 62: 126614, 2020 Dec.
Article de Anglais | MEDLINE | ID: mdl-32682287

RÉSUMÉ

BACKGROUND: An essential element imbalance in the joint might favor gradual degeneration of the articular cartilage. It has been reported that cadmium (Cd) plays an antagonistic role with regards to the presence of essential elements, such as zinc (Zn), iron (Fe), and manganese (Mn), which may favor the development of disabling diseases, like osteoarthritis (OA) and osteoporosis. METHODS: 3D cultures of human chondrocytes were phenotyped with the Western blot technique and structurally evaluated with histological staining. The samples were exposed to 1, 5, and 10 µM of CdCl2 for 12 h, with a non-exposed culture as control. The concentration of Cd, Fe, Mn, Zn, chromium (Cr), and nickel (Ni) was quantified through plasma mass spectrometry (ICP-MS). The data were analyzed with a Kruskal Wallis test, a Kendall's Tau test and Spearman's correlation coefficient with the Stata program, version 14. RESULTS: Our results suggest that Cd exposure affects the structure of micromass cultures and plays an antagonistic role on the concentration of essential metals, such as Zn, Ni, Fe, Mn, and Cr. CONCLUSION: Cd exposure may be a risk factor for developing joint diseases like OA, as it can interfere with cartilage absorption of other essential elements that maintain cartilage homeostasis.


Sujet(s)
Cadmium/pharmacologie , Chondrocytes/effets des médicaments et des substances chimiques , Chondrocytes/métabolisme , Adulte , Technique de Western , Cadmium/métabolisme , Humains , Immunophénotypage , Fer/métabolisme , Mâle , Spectrométrie de masse , Nickel/métabolisme , Arthrose/métabolisme , Jeune adulte , Zinc/métabolisme
5.
mSystems ; 3(1)2018.
Article de Anglais | MEDLINE | ID: mdl-29404426

RÉSUMÉ

In this study, a young Cheddar curd was used to produce two types of surface-ripened cheese, using two commercial smear-culture mixes of yeasts and bacteria. Whole-metagenome shotgun sequencing was used to screen the microbial population within the smear-culture mixes and on the cheese surface, with comparisons of microorganisms at both the species and the strain level. The use of two smear mixes resulted in the development of distinct microbiotas on the surfaces of the two test cheeses. In one case, most of the species inoculated on the cheese established themselves successfully on the surface during ripening, while in the other, some of the species inoculated were not detected during ripening and the most dominant bacterial species, Glutamicibacter arilaitensis, was not a constituent of the culture mix. Generally, yeast species, such as Debaryomyces hansenii and Geotrichum candidum, were dominant during the first stage of ripening but were overtaken by bacterial species, such as Brevibacterium linens and G. arilaitensis, in the later stages. Using correlation analysis, it was possible to associate individual microorganisms with volatile compounds detected by gas chromatography-mass spectrometry in the cheese surface. Specifically, D. hansenii correlated with the production of alcohols and carboxylic acids, G. arilaitensis with alcohols, carboxylic acids and ketones, and B. linens and G. candidum with sulfur compounds. In addition, metagenomic sequencing was used to analyze the metabolic potential of the microbial populations on the surfaces of the test cheeses, revealing a high relative abundance of metagenomic clusters associated with the modification of color, variation of pH, and flavor development. IMPORTANCE Fermented foods, in particular, surface-ripened cheese, represent a model to explain the metabolic interactions which regulate microbial succession in complex environments. This study explains the role of individual species in a heterogeneous microbial environment, i.e., the exterior of surface-ripened cheese. Through whole-metagenome shotgun sequencing, it was possible to investigate the metabolic potential of the resident microorganisms and show how variations in the microbial populations influence important aspects of cheese ripening, especially flavor development. Overall, in addition to providing fundamental insights, this research has considerable industrial relevance relating to the production of fermented food with specific qualities.

6.
Sci Rep ; 7(1): 6685, 2017 07 27.
Article de Anglais | MEDLINE | ID: mdl-28751714

RÉSUMÉ

Cystic Fibrosis (CF) and its treatment result in an altered gut microbiota composition compared to non-CF controls. However, the impact of this on gut microbiota functionality has not been extensively characterised. Our aim was to conduct a proof-of-principle study to investigate if measurable changes in gut microbiota functionality occur in adult CF patients compared to controls. Metagenomic DNA was extracted from faecal samples from six CF patients and six non-CF controls and shotgun metagenomic sequencing was performed on the MiSeq platform. Metabolomic analysis using gas chromatography-mass spectrometry was conducted on faecal water. The gut microbiota of the CF group was significantly different compared to the non-CF controls, with significantly increased Firmicutes and decreased Bacteroidetes. Functionality was altered, with higher pathway abundances and gene families involved in lipid (e.g. PWY 6284 unsaturated fatty acid biosynthesis (p = 0.016)) and xenobiotic metabolism (e.g. PWY-5430 meta-cleavage pathway of aromatic compounds (p = 0.004)) in CF patients compared to the controls. Significant differences in metabolites occurred between the two groups. This proof-of-principle study demonstrates that measurable changes in gut microbiota functionality occur in CF patients compared to controls. Larger studies are thus needed to interrogate this further.


Sujet(s)
Mucoviscidose/microbiologie , Microbiome gastro-intestinal , Adulte , Sujet âgé , Études cas-témoins , Microbiome gastro-intestinal/génétique , Gene Ontology , Humains , Voies et réseaux métaboliques , Adulte d'âge moyen , Phylogenèse , Projets pilotes , Analyse en composantes principales , ARN ribosomique 16S/génétique , Xénobiotique/métabolisme , Jeune adulte
8.
BMC Microbiol ; 17(1): 58, 2017 03 09.
Article de Anglais | MEDLINE | ID: mdl-28279152

RÉSUMÉ

BACKGROUND: Cystic Fibrosis (CF) is an autosomal recessive disease that affects the function of a number of organs, principally the lungs, but also the gastrointestinal tract. The manifestations of cystic fibrosis transmembrane conductance regulator (CFTR) dysfunction in the gastrointestinal tract, as well as frequent antibiotic exposure, undoubtedly disrupts the gut microbiota. To analyse the effects of CF and its management on the microbiome, we compared the gut microbiota of 43 individuals with CF during a period of stability, to that of 69 non-CF controls using 454-pyrosequencing of the 16S rRNA gene. The impact of clinical parameters, including antibiotic therapy, on the results was also assessed. RESULTS: The CF-associated microbiome had reduced microbial diversity, an increase in Firmicutes and a reduction in Bacteroidetes compared to the non-CF controls. While the greatest number of differences in taxonomic abundances of the intestinal microbiota was observed between individuals with CF and the healthy controls, gut microbiota differences were also reported between people with CF when grouped by clinical parameters including % predicted FEV1 (measure of lung dysfunction) and the number of intravenous (IV) antibiotic courses in the previous 12 months. Notably, CF individuals presenting with severe lung dysfunction (% predicted FEV1 ≤ 40%) had significantly (p < 0.05) reduced gut microbiota diversity relative to those presenting with mild or moderate dysfunction. A significant negative correlation (-0.383, Simpson's Diversity Index) was also observed between the number of IV antibiotic courses and gut microbiota diversity. CONCLUSIONS: This is one of the largest single-centre studies on gut microbiota in stable adults with CF and demonstrates the significantly altered gut microbiota, including reduced microbial diversity seen in CF patients compared to healthy controls. The data show the impact that CF and it's management have on gut microbiota, presenting the opportunity to develop CF specific probiotics to minimise microbiota alterations.


Sujet(s)
Bactéries/classification , Mucoviscidose/complications , Mucoviscidose/microbiologie , Microbiome gastro-intestinal , Tube digestif/microbiologie , Administration par voie intraveineuse , Adulte , Sujet âgé , Sujet âgé de 80 ans ou plus , Antibactériens/pharmacologie , Antibactériens/usage thérapeutique , Bacteroidetes , Biodiversité , Classification , ADN bactérien , Fèces/microbiologie , Femelle , Firmicutes , Microbiome gastro-intestinal/effets des médicaments et des substances chimiques , Humains , Mâle , Métagénome , Adulte d'âge moyen , Phénotype , Probiotiques , ARN ribosomique 16S/génétique , Spécificité d'espèce
9.
J Appl Microbiol ; 122(5): 1245-1261, 2017 May.
Article de Anglais | MEDLINE | ID: mdl-28199757

RÉSUMÉ

AIMS: The Lactobacillus casei group represents a widely explored group of lactic acid bacteria, characterized by a high level of biodiversity. In this study, the genetic and phenotypic diversity of a collection of more than 300 isolates of the Lact. casei group and their potential to produce volatile metabolites important for flavour development in dairy products, was examined. METHODS AND RESULTS: Following confirmation of species by 16S rRNA PCR, the diversity of the isolates was determined by pulsed-field gel electrophoresis. The activities of enzymes involved in the proteolytic cascade were assessed and significant differences among the strains were observed. Ten strains were chosen based on the results of their enzymes activities and they were analysed for their ability to produce volatiles in media with increased concentrations of a representative aromatic, branched chain and sulphur amino acid. Volatiles were assessed using gas chromatography coupled with mass spectrometry. Strain-dependent differences in the range and type of volatiles produced were evident. CONCLUSIONS: Strains of the Lact. casei group are characterized by genetic and metabolic diversity which supports variability in volatile production. SIGNIFICANCE AND IMPACT OF THE STUDY: This study provides a screening approach for the knowledge-based selection of strains potentially enabling flavour diversification in fermented dairy products.


Sujet(s)
Protéines bactériennes/métabolisme , Biodiversité , Produits laitiers de culture/microbiologie , Aromatisants/métabolisme , Lacticaseibacillus casei/génétique , Acides aminés/métabolisme , Protéines bactériennes/génétique , Électrophorèse en champ pulsé/méthodes , Fermentation , Lactobacillaceae/génétique , Lacticaseibacillus casei/enzymologie , Lacticaseibacillus casei/métabolisme , Réaction de polymérisation en chaîne/méthodes , ARN ribosomique 16S/génétique
10.
J Cyst Fibros ; 16(2): 291-298, 2017 Mar.
Article de Anglais | MEDLINE | ID: mdl-27908697

RÉSUMÉ

Clostridium difficile is an anaerobic Gram-positive, spore-forming, toxin-producing bacillus transmitted among humans through the faecal-oral route. Despite increasing carriage rates and the presence of C. difficile toxin in stool, patients with CF rarely appear to develop typical manifestations of C. difficile infection (CDI). In this study, we examined the carriage, toxin production, ribotype distribution and antibiotic susceptibility of C. difficile in a cohort of 60 adult patients with CF who were pre-lung transplant. C. difficile was detected in 50% (30/60) of patients with CF by culturing for the bacteria. C. difficile toxin was detected in 63% (19/30) of C. difficile-positive stool samples. All toxin-positive stool samples contained toxigenic C. difficile strains harbouring toxin genes, tcdA and tcdB. Despite the presence of C. difficile and its toxin in patient stool, no acute gastrointestinal symptoms were reported. Ribotyping of C. difficile strains revealed 16 distinct ribotypes (RT), 11 of which are known to be disease-causing including the hyper-virulent RT078. Additionally, strains RT002, RT014, and RT015, which are common in non-CF nosocomial infection were described. All strains were susceptible to vancomycin, metronidazole, fusidic acid and rifampicin. No correlation was observed between carriage of C. difficile or any characteristics of isolated strains and any recorded clinical parameters or treatment received. We demonstrate a high prevalence of hypervirulent, toxigenic strains of C. difficile in asymptomatic patients with CF. This highlights the potential role of asymptomatic patients with CF in nosocomial transmission of C. difficile.


Sujet(s)
État de porteur sain , Clostridioides difficile/isolement et purification , Infection croisée , Mucoviscidose , Entérocolite pseudomembraneuse , Adulte , Techniques de typage bactérien/méthodes , État de porteur sain/diagnostic , État de porteur sain/épidémiologie , Études de cohortes , Infection croisée/diagnostic , Infection croisée/microbiologie , Mucoviscidose/épidémiologie , Mucoviscidose/microbiologie , Entérocolite pseudomembraneuse/diagnostic , Entérocolite pseudomembraneuse/épidémiologie , Femelle , Humains , Irlande/épidémiologie , Mâle , Tests de sensibilité microbienne/méthodes , Prévalence
11.
J Anim Sci ; 91(1): 318-30, 2013 Jan.
Article de Anglais | MEDLINE | ID: mdl-23097397

RÉSUMÉ

This study assessed the effect of feeding genetically modified maize expressing a truncated form of the Cry1Ab protein from Bacillus thuringiensis (Bt MON810 maize) to sows during gestation and lactation and their offspring from weaning to 115 d postweaning on offspring growth and health. After weaning at approximately 28 d of age (d 0), individually penned, mixed sex pigs (approximately 8 kg BW) from sows fed isogenic or Bt maize diets were blocked by sow treatment, sex, and BW and randomly assigned to Bt or isogenic maize diets as follows: i) isogenic maize-fed sow/isogenic maize-fed offspring (iso/iso); ii) isogenic maize-fed sow/Bt maize-fed offspring (iso/Bt); iii) Bt maize-fed sow/isogenic maize-fed offspring (Bt/iso); and iv) Bt maize-fed sow/Bt maize-fed offspring (Bt/Bt). Growth performance was recorded at intervals to harvest at approximately 105 kg BW (n=15/treatment) and blood samples were taken for biochemical analysis on d 0, 30, 70, 100, and 115 postweaning (n=10/treatment). Pigs were harvested on d 115 postweaning (n=10/treatment), and carcass weight, backfat depth, and organ weights (heart, kidney, spleen, and liver) were recorded. Kidney, liver, lymph nodes, and small intestine were collected for histological analysis. Offspring from Bt maize-fed sows were heavier than offspring from isogenic maize-fed sows on d 30 (P<0.05), 100 (P<0.05), and 115 postweaning (P<0.05) and had greater overall ADG (P<0.05). Overall ADFI was greater for offspring from sows fed Bt maize (P<0.05) and for Bt maize-fed pigs (P<0.05). Offspring from Bt maize-fed sows had greater carcass (P<0.05) and lighter spleen (P<0.05) weights. Dressing percentage was greater for Bt maize-fed pigs than isogenic maize-fed pigs (P<0.05), and livers were lighter for pigs in the Bt/Bt group than pigs in the iso/Bt or Bt/iso group (P<0.05). Offspring from Bt maize-fed sows also had greater duodenal crypt depths (P<0.05) and lower villus height/crypt depth ratios (P<0.05). No pathology was observed in the organs, and serum biochemistry values generally remained within normal limits and no overall differences were observed, with the exception of overall γ glutamyltransferase, which was less for pigs on the Bt/Bt treatment than pigs on the iso/Bt and Bt/iso treatments. These results indicate that transgenerational consumption of Bt maize diets is not detrimental to pig growth and health.


Sujet(s)
Phénomènes physiologiques nutritionnels chez l'animal , Protéines bactériennes/métabolisme , Endotoxines/métabolisme , Hémolysines/métabolisme , Phénomènes physiologiques nutritionnels maternels , Suidae/croissance et développement , Zea mays/génétique , Aliment pour animaux/analyse , Animaux , Toxines de Bacillus thuringiensis , Protéines bactériennes/génétique , Composition corporelle , Régime alimentaire/médecine vétérinaire , Consommation de boisson , Endotoxines/génétique , Femelle , Hémolysines/génétique , Intestins/anatomie et histologie , Rein/anatomopathologie , Foie/anatomopathologie , Noeuds lymphatiques/anatomopathologie , Parité , Végétaux génétiquement modifiés , Grossesse , Effets différés de l'exposition prénatale à des facteurs de risque , Suidae/sang
12.
Animal ; 6(10): 1609-19, 2012 Oct.
Article de Anglais | MEDLINE | ID: mdl-23031560

RÉSUMÉ

A total of 72 male weaned pigs were used in a 110-day study to investigate the effect of feeding genetically modified (GM) Bt MON810 maize on selected growth and health indicators. It was hypothesised that in pigs fed Bt maize, growth and health are not impacted compared with pigs fed isogenic maize-based diets. Following a 12-day basal period, pigs (10.7 ± 1.9 kg body weight (BW); ∼40 days old) were blocked by weight and ancestry and randomly assigned to treatments: (1) non-GM maize diet for 110 days (non-GM), (2) GM maize diet for 110 days (GM), (3) non-GM maize diet for 30 days followed by GM maize diet up to day 110 (non-GM/GM) and (4) GM maize diet for 30 days followed by non-GM maize diet up to day 110 (GM/non-GM). BW and daily feed intake were recorded on days 0, 30, 60 and 110 (n = 15). Body composition was determined by dual energy X-ray absorptiometry (n = 10) on day 80. Following slaughter on day 110, organs and intestines were weighed and sampled for histological analysis and urine was collected for biochemical analysis (n = 10). Serum biochemistry analysis was performed on days 0, 30, 60, 100 and 110. Growth performance and serum biochemistry were analysed as repeated measures with time and treatment as main factors. The slice option of SAS was used to determine treatment differences at individual time points. There was no effect of feeding GM maize on overall growth, body composition, organ and intestinal weight and histology or serum biochemistry on days 60 and 100 and on urine biochemistry on day 110. A treatment × time interaction was observed for serum urea (SU; P < 0.05), creatinine (SC; P < 0.05) and aspartate aminotransferase (AST; P < 0.05). On day 30, SU was lower for the non-GM/GM treatment compared with the non-GM, GM and GM/non-GM treatments (P < 0.05). On day 110, SC was higher for the non-GM/GM and GM/non-GM treatments compared with non-GM and GM treatments (P < 0.05). Overall, serum total protein was lower for the GM/non-GM treatment compared with the non-GM/GM treatment (P < 0.05). The magnitude of change observed in some serum biochemical parameters did not indicate organ dysfunction and the changes were not accompanied by histological lesions. Long-term feeding of GM maize to pigs did not adversely affect growth or the selected health indicators investigated.


Sujet(s)
Aliment pour animaux/effets indésirables , Aliment génétiquement modifié/effets indésirables , Suidae/physiologie , Zea mays/effets indésirables , Absorptiométrie photonique/médecine vétérinaire , Aliment pour animaux/analyse , Élevage , Phénomènes physiologiques nutritionnels chez l'animal , Animaux , Toxines de Bacillus thuringiensis , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Analyse chimique du sang/médecine vétérinaire , Composition corporelle , Endotoxines/génétique , Endotoxines/métabolisme , Hémolysines/génétique , Hémolysines/métabolisme , Mâle , Spécificité d'organe , Suidae/croissance et développement , Examen des urines/médecine vétérinaire , Prise de poids , Zea mays/génétique , Zea mays/métabolisme
13.
Ir J Med Sci ; 179(2): 245-50, 2010 Jun.
Article de Anglais | MEDLINE | ID: mdl-19495833

RÉSUMÉ

INTRODUCTION: Clostridium difficile is an increasing cause of nosocomial diarrhoea and colitis. The aim of this study was to identify the prevalence and characteristics of asymptomatic C. difficile carriage in a continuing care institution for the elderly. METHODS: Stool samples were collected from 100 asymptomatic patients, whose median age was 83 years. Samples were tested for C. difficile using traditional culturing methods, 16s rDNA and 16s-23s intergenic spacer (IGS) rDNA sequencing, and analysed for toxin production and toxin genes. RESULTS: The prevalence of C. difficile carriage was 10/100 (10%) following culture and 16s and IGS sequencing. An additional seven isolates, initially identified as C. difficile, were subsequently identified by IGS rDNA sequencing as C. sordellii of the 10% that tested positive for C. difficile, seven tested positive for toxin A and B. A significant number of C. difficile carriers had recent antibiotic exposure compared with non-carriers, P = 0.046. CONCLUSION: The prevalence of asymptomatic C. difficile carriage in this institution was 10%, 7% of which were toxin positive. This study underscores the importance of increased vigilance for C. difficile using microbial and molecular methodology and identifies patients at increased risk following antibiotic administration.


Sujet(s)
État de porteur sain/épidémiologie , Clostridioides difficile/isolement et purification , Infection croisée/épidémiologie , Entérocolite pseudomembraneuse/épidémiologie , Entérotoxines , Sujet âgé , Sujet âgé de 80 ans ou plus , Antibactériens/effets indésirables , Antibactériens/usage thérapeutique , Séquence nucléotidique , État de porteur sain/microbiologie , État de porteur sain/anatomopathologie , État de porteur sain/transmission , Clostridioides difficile/génétique , Infection croisée/microbiologie , Infection croisée/anatomopathologie , Infection croisée/transmission , ADN bactérien/génétique , ADN ribosomique/génétique , Réservoirs de maladies/microbiologie , Entérocolite pseudomembraneuse/microbiologie , Entérocolite pseudomembraneuse/anatomopathologie , Entérocolite pseudomembraneuse/transmission , Fèces/microbiologie , Femelle , Humains , Irlande/épidémiologie , Durée du séjour , Soins de longue durée/statistiques et données numériques , Mâle , Prévalence , Facteurs de risque
14.
J Dairy Sci ; 90(5): 2200-10, 2007 May.
Article de Anglais | MEDLINE | ID: mdl-17430918

RÉSUMÉ

A total of 1,052 bacteria and 828 yeasts were isolated from the surface flora of 6 batches of Gubbeen cheese made in 1996-1997 and 2002-2003. Stability of the microflora was evaluated over time and also during ripening at 4, 10, and 16 d (batches 4, 5, and 6) or at 4, 16, 23, and 37 d (batches 1, 2, and 3). Bacteria were identified using pulsed-field gel electrophoresis, repetitive extragenic palindromic-PCR, and 16S rRNA gene sequencing, and yeasts were identified by Fourier transform infrared spectroscopy. The bacteria included at least 17 species, of which the most common were Staphylococcus saprophyticus (316 isolates), Corynebacterium casei (248 isolates), Brevibacterium aurantiacum (187 isolates), Corynebacterium variabile (146 isolates), Microbacterium gubbeenense (55 isolates), Staphylococcus equorum/cohnii (31 isolates), and Psychrobacter spp. (26 isolates). The most common yeasts were Debaryomyces hansenii (624 isolates), Candida catenulata (135 isolates), and Candida lusitaniae (62 isolates). In all batches of cheese except batch 2, a progression of bacteria was observed, with staphylococci dominating the early stages of ripening and coryneforms the later stages. No progression of yeast was found. Pulsed-field gel electrophoresis showed that several different strains of the 5 important species of bacteria were present, but generally only one predominated. The commercial strains used for smearing the cheese were recovered, but only in very small numbers early in ripening. Four species, B. aurantiacum, C. casei, C. variabile, and Staph. saprophyticus, were found on all batches of cheese, but their relative importance varied considerably. The results imply that significant variation occurs in the surface microflora of cheese.


Sujet(s)
Bactéries/isolement et purification , Biodiversité , Fromage/microbiologie , Levures/isolement et purification , Bactéries/classification , Bactéries/croissance et développement , Fromage/analyse , DNA restriction enzymes/métabolisme , Électrophorèse en champ pulsé , Manipulation des aliments/méthodes , Concentration en ions d'hydrogène , ARN ribosomique 16S/génétique , Sels/analyse , Facteurs temps , Eau/analyse , Levures/classification , Levures/croissance et développement
15.
Int J Food Microbiol ; 81(1): 73-84, 2003 Feb 25.
Article de Anglais | MEDLINE | ID: mdl-12423920

RÉSUMÉ

Two strains, Enterococcus faecium RZS C5 and E. faecium DPC 1146, produce listericidal bacteriocins, so-called enterocins. E. faecium RZS C5 was studied during batch fermentation in both a complex medium (MRS) and in milk to understand the influence of environmental factors, characteristic for milk and cheese, on both growth and bacteriocin production. Fermentation conditions were chosen in view of the applicability of in situ enterocin production during Cheddar cheese production. Enterocin production by E. faecium RZS C5 in MRS started in the early logarithmic growth phase, and enterocin activity decreased during the stationary phase. The effect of pH on enterocin production and decrease of activity was as intense as the effect on bacterial growth. Higher enterocin production took place at pH 5.5 compared with pH 6.5. The use of lactose instead of glucose increased the production of enterocin, and at higher lactose concentration, production increased more and loss of activity decreased. The production in skimmed milk compared to MRS was lower and was detected mainly in the stationary phase. When casein hydrolysate was added to the milk, enterocin production was higher and started earlier, indicating the importance of an additional nitrogen source for growth of E. faecium in milk. For co-cultures of E. faecium RZS C5 with the starters used during Cheddar cheese manufacture, no enterocin activity was detected during the milk fermentation. Furthermore, the applicability of E. faecium RZS C5 and E. faecium DPC 1146 strains was tested in Cheddar cheese manufacture on pilot scale. Enterocin production took place from the beginning of the cheese manufacturing and was stable during the whole ripening phase of the cheese. This indicates that both an early and late contamination of the milk or cheese can be combated with a stable, in situ enterocin production. The use of such a co-culture is an additional safety provision beyond good manufacturing practices.


Sujet(s)
Bactériocines/biosynthèse , Fromage/microbiologie , Enterococcus faecium/croissance et développement , Enterococcus faecium/métabolisme , Microbiologie alimentaire , Composés pontés/métabolisme , Techniques de coculture , Fermentation , Concentration en ions d'hydrogène , Cinétique
16.
Syst Appl Microbiol ; 23(4): 510-22, 2000 Dec.
Article de Anglais | MEDLINE | ID: mdl-11249021

RÉSUMÉ

Phenotypic characterisation of Lactococcus and Enterococcus species remains unreliable as strains of both genera have been isolated which do not conform to the traditional criteria for separation of these genera. A bank of 131 isolates was phenotypically characterised by three methods: (a) traditional broth tests, (b) API Rapid ID 32 Strep and (c) BBL Crystal ID kits. Differences in genus designation between commercial kits were evident for 12 strains (9%), while 7 strains (5%) remained unidentified by either kit. Published 16S rRNA sequences were aligned and used to design genus-specific primers which, when used in separate PCR reactions, were capable of distinguishing all type strains of Lactococcus and Enterococcus. These primers did not react with known species of Streptococcus, Pediococcus, Lactobacillus, Leuconostoc or Tetragenococcus. Isolates which could not be identified by phenotype were assigned to either genus on the basis of the gene primers.


Sujet(s)
Enterococcus/classification , Lactobacillus/classification , Réaction de polymérisation en chaîne/méthodes , Amorces ADN/génétique , ADN bactérien/génétique , Enterococcus/génétique , Microbiologie alimentaire , Gènes bactériens , Génotype , Lactobacillus/génétique , Phénotype , Phylogenèse , ARN ribosomique 16S , Trousses de réactifs pour diagnostic , Spécificité d'espèce
17.
J Appl Bacteriol ; 80(5): 557-64, 1996 May.
Article de Anglais | MEDLINE | ID: mdl-9072528

RÉSUMÉ

A predictive model based on growth of Listeria monocytogenes in milk is described. The main aim of this work was to generate a predictive model in milk acidified with lactic acid to mimic conditions found in a range of dairy products. A complete factorial design was employed to determine the effects of pH (4.5-7.5), temperature (3-35 degrees C) and salt concentration (0-8%) on growth of the organism. There were 210 design points and growth curves were individually fitted for the Gompertz function using non-linear regression. Descriptors of the curves, such as lag phase duration (LPD), exponential growth rate (EGR) and generation time (GT) were calculated and polynomial models were developed relating these to pH, temperature and salt concentration. The selected cubic polynomial model gave acceptable predictive estimates of growth and was stable, i.e. predictions were repeatable over the range of environmental variables studied. The model was further tested to determine its capacity for predicting growth of listeria in a range of dairy foods and these validation studies confirm its usefulness as a rapid means of estimating growth of the organism under specified environmental conditions.


Sujet(s)
Produits laitiers/microbiologie , Listeria monocytogenes/croissance et développement , Animaux , Milieux de culture , Lait/microbiologie , Modèles biologiques
18.
Appl Environ Microbiol ; 62(2): 612-9, 1996 Feb.
Article de Anglais | MEDLINE | ID: mdl-8593062

RÉSUMÉ

Lactococcus lactis DPC3147, a strain isolated from an Irish kefir grain, produces a bacteriocin with a broad spectrum of inhibition. The bacteriocin produced is heat stable, particularly at a low pH, and inhibits nisin-producing (Nip+) lactococci. On the basis of the observation that the nisin structural gene (nisA) does not hybridize to DPC3147 genomic DNA, the bacteriocin produced was considered novel and designated lacticin 3147. The genetic determinants which encode lacticin 3147 are contained on a 63-kb plasmid, which was conjugally mobilized to a commercial cheese starter, L. lactis subsp. cremoris DPC4268. The resultant transconjugant, DPC4275, both produces and is immune to lacticin 3147. The ability of lacticin 3147-producing lactococci to perform as cheddar cheese starters was subsequently investigated in cheesemaking trials. Bacteriocin-producing starters (which included the transconjugant strain DPC4275) produced acid at rates similar to those of commercial strains. The level of lacticin 3147 produced in cheese remained constant over 6 months of ripening and correlated with a significant reduction in the levels of nonstarter lactic acid bacteria. Such results suggest that these starters provide a means of controlling developing microflora in ripened fermented products.


Sujet(s)
Bactériocines/biosynthèse , Fromage/microbiologie , Lactococcus lactis/métabolisme , Bactériocines/génétique , Séquence nucléotidique , Amorces ADN/génétique , ADN bactérien/génétique , Technologie alimentaire , Lactococcus lactis/génétique , Données de séquences moléculaires , Nisine/biosynthèse , Plasmides/génétique
19.
J Appl Bacteriol ; 73(4): 331-6, 1992 Oct.
Article de Anglais | MEDLINE | ID: mdl-1429309

RÉSUMÉ

Raw milk from 70 farms was sampled over 13 months for salmonellas, listerias, Escherichia coli, Staphylococcus aureus and mastitic streptococci; total bacterial counts (TBC), coliforms and somatic cells were also counted. TBC < or = 30,000/ml were obtained in 63% of samples. High count milks were found mainly during the winter months: 13% of samples had > 10(4) mastitis pathogens/ml of milk. The mean somatic cell count varied from 4.0 x 10(5) to 8.0 x 10(5)/ml throughout the year with highest counts during the late lactation period. Coliforms were present in all samples, but 65-71% of samples had < 100 coliforms/ml. Up to 60% of supplies had < or = 10 E. coli/ml. One of the 589 samples tested (0.1%) was positive for salmonellas. Yersinia enterocolitica and Y. enterocolitica-like organisms were isolated from 39% of samples with up to 68% of samples positive at some sampling periods. A total of 222 strains of yersinias were isolated; Y. enterocolitica (59%) was the most common strain followed by Y. fredriksenii (35%), Y. kristensenii (1.0%), Y. intermedia (4.5%) and Y. aldovae (0.5%). Listerias were isolated from 8.3% of samples tested; 4.9% were Listeria monocytogenes and 3.4% were L. innocua. There was a significant rise in the isolation rate between December and April from a base line of 0-5% during the spring and summer to 35-37% during the winter months while the cows were indoors. Of 66 silage samples tested from the farms involved in the survey 9% of samples were positive for listerias; 3% of these were L. monocytogenes and 6% were L. innocua.(ABSTRACT TRUNCATED AT 250 WORDS)


Sujet(s)
Bactéries/pathogénicité , Microbiologie alimentaire , Lait/microbiologie , Animaux , Bactéries/isolement et purification , Numération cellulaire , Escherichia coli/isolement et purification , Irlande , Listeria/isolement et purification , Mastite/microbiologie , Lait/cytologie , Salmonella/isolement et purification , Staphylococcus/isolement et purification , Streptococcus/isolement et purification , Virulence , Yersinia/isolement et purification
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