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Int J Syst Evol Microbiol ; 56(Pt 7): 1475-1484, 2006 Jul.
Article de Anglais | MEDLINE | ID: mdl-16825615

RÉSUMÉ

A Gram-positive, spore-forming bacillus was isolated from a sample taken from an approximately 2000-year-old shaft-tomb located in the Mexican state of Jalisco, near the city of Tequila. Tentative identification using conventional biochemical analysis consistently identified the isolate as Bacillus subtilis. DNA isolated from the tomb isolate, strain 10b(T), and closely related species was used to amplify a Bacillus-specific portion of the highly conserved 16S rRNA gene and an internal region of the superoxide dismutase gene (sodA(int)). Trees derived from maximum-likelihood methods applied to the sodA(int) sequences yielded non-zero branch lengths between strain 10b(T) and its closest relative, whereas a comparison of a Bacillus-specific 546 bp amplicon of the 16S rRNA gene demonstrated 99 % similarity with B. subtilis. Although the 16S rRNA gene sequences of strain 10b(T) and B. subtilis were 99 % similar, PFGE of NotI-digested DNA of strain 10b(T) revealed a restriction profile that was considerably different from those of B. subtilis and other closely related species. Whereas qualitative differences in whole-cell fatty acids were not observed, significant quantitative differences were found to exist between strain 10b(T) and each of the other closely related Bacillus species examined. In addition, DNA-DNA hybridization studies demonstrated that strain 10b(T) had a relatedness value of less than 70 % with B. subtilis and other closely related species. Evidence from the sodA(int) sequences, whole-cell fatty acid profiles and PFGE analysis, together with results from DNA-DNA hybridization studies, justify the classification of strain 10b(T) as representing a distinct species, for which the name Bacillus tequilensis sp. nov. is proposed. The type strain is 10b(T) (=ATCC BAA-819(T)=NCTC 13306(T)).


Sujet(s)
Bacillus/classification , Bacillus/isolement et purification , Microbiologie du sol , Archéologie , Bacillus/composition chimique , Bacillus/physiologie , Protéines bactériennes/génétique , Techniques de typage bactérien , Funérailles , Profilage d'ADN , ADN bactérien/composition chimique , ADN bactérien/génétique , ADN ribosomique/composition chimique , ADN ribosomique/génétique , Type II site-specific deoxyribonuclease , Électrophorèse en champ pulsé , Acides gras/analyse , Acides gras/isolement et purification , Gènes d'ARN ribosomique , Mexique , Données de séquences moléculaires , Hybridation d'acides nucléiques , Phylogenèse , Polymorphisme de restriction , ARN bactérien/génétique , ARN ribosomique 16S/génétique , Analyse de séquence d'ADN , Superoxide dismutase/génétique
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