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1.
J Biochem ; 175(5): 561-572, 2024 Apr 29.
Article de Anglais | MEDLINE | ID: mdl-38215735

RÉSUMÉ

Glycosylation changes in cancer proteins have been associated with malignant transformation. However, techniques for analyzing site-specific glycosylation changes in target proteins obtained from clinical tissue samples are insufficient. To overcome these problems, we developed a targeted N-glycoproteomic approach consisting of immunoprecipitation, glycopeptide enrichment, LC/MS/MS and structural assignment using commercially available analytical software followed by manual confirmation. This approach was applied to the comparative site-specific glycosylation analysis of lysosome-associated membrane glycoprotein 1 (LAMP1) between breast cancer (BC) tumors and normal tissues adjacent to tumors. Extensive determination of glycan heterogeneity from four N-glycosylation sites (Asn84/103/249/261) in LAMP1 identified 262 glycoforms and revealed remarkable diversity in tumor glycan structures. A significant increase in N-glycoforms with multiple fucoses and sialic acids at Asn84/249 and high-mannose-type glycans at Asn103/261 were observed in the tumor. Principal component analysis revealed that tumors of different subtypes have independent distributions. This approach enables site-specific glycopeptide analysis of target glycoprotein in breast cancer tissue and become a powerful tool for characterizing tumors with different pathological features by their glycan profiles.


Sujet(s)
Tumeurs du sein , Protéine de membrane-1 associée au lysosome , Humains , Tumeurs du sein/métabolisme , Tumeurs du sein/anatomopathologie , Glycosylation , Femelle , Protéines lysosomales membranaires/métabolisme , Spectrométrie de masse en tandem , Polyosides/métabolisme , Polyosides/composition chimique
2.
Front Immunol ; 14: 1272537, 2023.
Article de Anglais | MEDLINE | ID: mdl-37901252

RÉSUMÉ

Background: Beta-1,4-galactosyltransferase-3 (B4GALT3) belongs to the family of beta-1,4-galactosyltransferases (B4GALTs) and is responsible for the transfer of UDP-galactose to terminal N-acetylglucosamine. B4GALT3 is differentially expressed in tumors and adjacent normal tissues, and is correlated with clinical prognosis in several cancers, including neuroblastoma, cervical cancer, and bladder cancer. However, the exact role of B4GALT3 in the tumor immune microenvironment (TIME) remains unclear. Here, we aimed to elucidate the function of B4GALT3 in the TIME. Methods: To study the functions of B4GALT3 in cancer immunity, either weakly or strongly immunogenic tumor cells were subcutaneously transplanted into wild-type (WT) and B4galt3 knockout (KO) mice. Bone marrow transplantation and CD8+ T cell depletion experiments were conducted to elucidate the role of immune cells in suppressing tumor growth in B4galt3 KO mice. The cell types and gene expression in the tumor region and infiltrating CD8+ T cells were analyzed using flow cytometry and RNA sequencing. N-glycosylated proteins from WT and B4galt3 KO mice were compared using the liquid chromatography tandem mass spectrometry (LC-MS/MS)-based glycoproteomic approach. Results: B4galt3 KO mice exhibited suppressed growth of strongly immunogenic tumors with a notable increase in CD8+ T cell infiltration within tumors. Notably, B4galt3 deficiency led to changes in N-glycan modification of several proteins, including integrin alpha L (ITGAL), involved in T cell activity and proliferation. In vitro experiments suggested that B4galt3 KO CD8+ T cells were more susceptible to activation and displayed increased downstream phosphorylation of FAK linked to ITGAL. Conclusion: Our study demonstrates that B4galt3 deficiency can potentially boost anti-tumor immune responses, largely through enhancing the influx of CD8+ T cells. B4GALT3 might be suppressing cancer immunity by synthesizing the glycan structure of molecules on the CD8+ T cell surface, as evidenced by the changes in the glycan structure of ITGAL in immune cells. Importantly, B4galt3 KO mice showed no adverse effects on growth, development, or reproduction, underscoring the potential of B4GALT3 as a promising and safe therapeutic target for cancer treatment.


Sujet(s)
Lymphocytes T CD8+ , N-acetyllactosamine synthase , Tumeurs , Animaux , Souris , Chromatographie en phase liquide , Souris knockout , N-acetyllactosamine synthase/génétique , Polyosides , Spectrométrie de masse en tandem , Tumeurs/immunologie , Tumeurs/anatomopathologie
3.
J Biol Chem ; 299(7): 104905, 2023 07.
Article de Anglais | MEDLINE | ID: mdl-37302553

RÉSUMÉ

A primary pathology of Alzheimer's disease (AD) is amyloid ß (Aß) deposition in brain parenchyma and blood vessels, the latter being called cerebral amyloid angiopathy (CAA). Parenchymal amyloid plaques presumably originate from neuronal Aß precursor protein (APP). Although vascular amyloid deposits' origins remain unclear, endothelial APP expression in APP knock-in mice was recently shown to expand CAA pathology, highlighting endothelial APP's importance. Furthermore, two types of endothelial APP-highly O-glycosylated APP and hypo-O-glycosylated APP-have been biochemically identified, but only the former is cleaved for Aß production, indicating the critical relationship between APP O-glycosylation and processing. Here, we analyzed APP glycosylation and its intracellular trafficking in neurons and endothelial cells. Although protein glycosylation is generally believed to precede cell surface trafficking, which was true for neuronal APP, we unexpectedly observed that hypo-O-glycosylated APP is externalized to the endothelial cell surface and transported back to the Golgi apparatus, where it then acquires additional O-glycans. Knockdown of genes encoding enzymes initiating APP O-glycosylation significantly reduced Aß production, suggesting this non-classical glycosylation pathway contributes to CAA pathology and is a novel therapeutic target.


Sujet(s)
Acétyl-galactosamine , Maladie d'Alzheimer , Peptides bêta-amyloïdes , Précurseur de la protéine bêta-amyloïde , Angiopathie amyloïde cérébrale , Glycosylation , Animaux , Souris , Maladie d'Alzheimer/complications , Maladie d'Alzheimer/métabolisme , Maladie d'Alzheimer/anatomopathologie , Peptides bêta-amyloïdes/biosynthèse , Peptides bêta-amyloïdes/composition chimique , Peptides bêta-amyloïdes/métabolisme , Précurseur de la protéine bêta-amyloïde/composition chimique , Précurseur de la protéine bêta-amyloïde/métabolisme , Angiopathie amyloïde cérébrale/complications , Angiopathie amyloïde cérébrale/métabolisme , Angiopathie amyloïde cérébrale/anatomopathologie , Cellules endothéliales/métabolisme , Transport des protéines , Neurones/métabolisme , Appareil de Golgi/métabolisme , Acétyl-galactosamine/métabolisme
4.
Mass Spectrom (Tokyo) ; 12(1): A0117, 2023.
Article de Anglais | MEDLINE | ID: mdl-37250596

RÉSUMÉ

Aberrant glycosylation of membrane proteins is a hallmark of cancer and a useful molecular marker for the diagnosis of breast cancer (BC). However, the molecular mechanisms by which altered glycosylation affects the malignant transformations associated with BC are poorly understood. Accordingly, we performed comparative membrane N-glycoproteomics using the human BC cell line pair, Hs578T, and its syngeneic normal cell line, Hs578Bst. A total of 359 N-glycoforms derived from 113 proteins were identified in both cell lines, of which 27 were found only in Hs578T cells. Significant changes in N-glycosylation were found in the lysosome-associated membrane protein 1 (LAMP1), the integrin family, and laminin. Confocal immunofluorescence microscopy images revealed the accumulation of lysosomes in the perinuclear space in cancer cells, which could be associated with marked changes in LAMP1 glycosylation, such as a decreased level of polylactosamine chains. Overall, the alterations in glycosylation may be involved in changes in the adhesion and degradation of BC cells.

5.
Front Oncol ; 13: 1104936, 2023.
Article de Anglais | MEDLINE | ID: mdl-36845686

RÉSUMÉ

Aberrant glycosylation is a prominent feature of cancer, that can be used as targets to improve the existing cancer biomarkers, and help to assess metastasis risks, and therapeutic effects. We developed a targeted O-glycoproteomics method using serum specimens, and evaluated its utility in identifying advanced colorectal cancer (CRC) markers. To this end, we combined consecutive lectin affinity purification using Maclura pomifera lectin (MPL), jacalin, and Sambucus nigra lectin, which have affinities for the following O-glycans, that have received attention as cancer-related antigens, Tn (GalNAc-Ser/Thr), Sialyl Tn (Siaα2-6GalNAc-Ser/Thr), T (Galß1-3GalNAc-Ser/Thr), Sialyl T (Siaα2-3Galß1-GalNAc-Ser/Thr), and di-Sialyl T (Siaα2-3Galß1-3[Siaα2-6] GalNAc-Ser/Thr), with a unique O-glycoproteomics approach. A total of 2,068 O-glycoforms derived from 265 proteins were identified in healthy individuals and patients with advanced CRC, of which 44 CRC-specific O-glycoforms were extracted. Particularly, five glycoproteins with T, Sialyl T, and di-Sialyl T antigens in specific peptide regions were evaluated quantitatively and statistically. We found that fibulin-2 (FBLN2) (aa330-349)/T antigen (area under the curve [AUC] = 0.92); macrophage colony-stimulating factor 1 (CSF1) (aa370-395)/(T + di-Sialyl T) (AUC = 0.94); macrophage mannose receptor 1 (MRC1) (aa1083-1101 and aa1215-1229)/T (AUC = 0.96 and 0.99); fibrinogen alpha chain (FGA) (aa354-367, aa511-527 and aa559-573)/Sialyl T (AUC = 0.98, 0.90 and 0.94); and complement component C7 (C7) (aa692-701)/di-Sialyl T (AUC = 1.00), can have high diagnostic efficacy to strategically predict advanced CRC groups. Hence, they could be promising markers for detection of advanced CRC, and provide new clinical test indicators along with lectins, such as MPL and jacalin. Our O-glycoproteomics platform provides a novel tool and resource, for researchers and clinicians seeking to better understand and treat advanced CRC.

6.
Sci Rep ; 11(1): 11169, 2021 05 27.
Article de Anglais | MEDLINE | ID: mdl-34045517

RÉSUMÉ

N-glycosylation of glycoproteins, a major post-translational modification, plays a crucial role in various biological phenomena. In central nervous systems, N-glycosylation is thought to be associated with differentiation and regeneration; however, the state and role of N-glycosylation in neuronal differentiation remain unclear. Here, we conducted sequential LC/MS/MS analyses of tryptic digest, enriched glycopeptides, and deglycosylated peptides of proteins derived from human-induced pluripotent stem cells (iPSCs) and iPSC-derived neuronal cells, which were used as a model of neuronal differentiation. We demonstrate that the production profiles of many glycoproteins and their glycoforms were altered during neuronal differentiation. Particularly, the levels of glycoproteins modified with an N-glycan, consisting of five N-acetylhexosamines, three hexoses, and a fucose (HN5H3F), increased in dopaminergic neuron-rich cells (DAs). The N-glycan was deduced to be a fucosylated and bisected biantennary glycan based on product ion spectra. Interestingly, the HN5H3F-modified proteins were predicted to be functionally involved in neural cell adhesion, axon guidance, and the semaphorin-plexin signaling pathway, and protein modifications were site-selective and DA-selective regardless of protein production levels. Our integrated method for glycoproteome analysis and resultant profiles of glycoproteins and their glycoforms provide valuable information for further understanding the role of N-glycosylation in neuronal differentiation and neural regeneration.


Sujet(s)
Glycoprotéines/métabolisme , Cellules souches pluripotentes induites/physiologie , Cellules souches neurales/métabolisme , Neurogenèse , Lignée cellulaire , Glycosylation , Humains , Protéines membranaires/métabolisme , Protéomique
7.
J Biochem ; 170(3): 317-326, 2021 Oct 12.
Article de Anglais | MEDLINE | ID: mdl-33792699

RÉSUMÉ

Mesothelioma is a highly aggressive tumour associated with asbestos exposure and is histologically classified into three types: epithelioid-type, sarcomatoid-type and biphasic-type. The prognosis of mesothelioma patients is poor and there is no effective molecular-targeting therapy as yet. ERC/mesothelin is a glycoprotein that is highly expressed on several types of cancers including epithelioid mesothelioma, but also expressed on normal mesothelial cells. This is a predicted reason why there is no clinically approved therapeutic antibody targeting ERC/mesothelin. In the present study, we focussed on the differential glycosylation between ERC/mesothelin present on epithelioid mesothelioma and that on normal mesothelial cells and aimed to reveal a distinct feature of epithelioid mesothelioma cells. Lectin microarray analysis of ERC/mesothelin using cells and patient specimens showed significantly stronger binding of PHA-E4 lectin, which recognizes complex-type N-glycans having a so-called bisecting-GlcNAc structure, to ERC/mesothelin from epithelioid mesothelioma cells than that from normal mesothelial cells. Further, liquid chromatography/mass spectrometry analysis on ERC/mesothelin from epithelioid mesothelioma cells confirmed the presence of a bisecting-GlcNAc attached to Asn388 of ERC/mesothelin. These results suggest that this glycoproteome could serve as a potential target for the generation of a highly selective and safe therapeutic antibody for epithelioid mesothelioma.


Sujet(s)
Acétyl-glucosamine/métabolisme , Protéines liées au GPI/métabolisme , Lectines/métabolisme , Mésothéliome/métabolisme , Marqueurs biologiques tumoraux/métabolisme , Lignée cellulaire tumorale , Chromatographie en phase liquide/méthodes , Cellules épithélioïdes/métabolisme , Glycosylation , Humains , Spectrométrie de masse/méthodes , Mésothéline , Mésothéliome malin/métabolisme , Analyse par réseau de protéines/méthodes
8.
J Neurochem ; 153(5): 567-585, 2020 06.
Article de Anglais | MEDLINE | ID: mdl-31958346

RÉSUMÉ

In the mammalian nervous system, protein N-glycosylation plays an important role in neuronal physiology. In this study, we performed a comprehensive N-glycosylation analysis of mouse GluA1, one of the major subunits of α-amino-3-hydroxy-5-methyl-4-isoxazole-propionate type glutamate receptor, which possesses six potential N-glycosylation sites in the N-terminal domain. By mass spectrometry-based analysis, we identified the N-glycoforms and semiquantitatively determined the site-specific N-glycosylation occupancy of GluA1. In addition, only the N401-glycosylation site demonstrated incomplete N-glycosylation occupancy. Therefore, we generated a peptide antibody that specifically detects the N401-glycan-free form to precisely quantify N401-glycosylation occupancy. Using this antibody, we clarified that N401 occupancy varies between cell types and increases in an age-dependent manner in mouse forebrains. To address the regulatory mechanism of N401-glycosylation, binding proteins of GluA1 around the N401 site were screened. HSP70 family proteins, including Bip, were identified as candidates. Bip has been known as a molecular chaperone that plays a key role in protein folding in the ER (endoplasmic reticulum). To examine the involvement of Bip in N401-glycosylation, the effect of Bip over-expression on N401 occupancy was evaluated in HEK293T cells, and the results demonstrated Bip increases the N401 glycan-free form by mediating selective prolongation of its protein half-life. Taken together, we propose that the N401-glycosite of GluA1 receives a unique control of modification, and we also propose a novel N-glycosylation occupancy regulatory mechanism by Bip that might be associated with α-amino-3-hydroxy-5-methyl-4-isoxazole-propionate receptors function in the brain.


Sujet(s)
Anticorps/génétique , Anticorps/métabolisme , Chaperons moléculaires/génétique , Chaperons moléculaires/métabolisme , Récepteur de l'AMPA/génétique , Récepteur de l'AMPA/métabolisme , Animaux , Sites de fixation/physiologie , Femelle , Glycosylation , Cellules HEK293 , Humains , Souris , Souris de lignée C57BL , Souris de lignée ICR , Grossesse
9.
J Am Soc Mass Spectrom ; 29(6): 1138-1152, 2018 06.
Article de Anglais | MEDLINE | ID: mdl-29675740

RÉSUMÉ

To elucidate the relationship between the protein function and the diversity and heterogeneity of glycans conjugated to the protein, glycosylation sites, glycan variation, and glycan proportions at each site of the glycoprotein must be analyzed. Glycopeptide-based structural analysis technology using mass spectrometry has been developed; however, complicated analyses of complex spectra obtained by multistage fragmentation are necessary, and sensitivity and throughput of the analyses are low. Therefore, we developed a liquid chromatography/mass spectrometry (MS)-based glycopeptide analysis method to reveal the site-specific glycome (Glycan heterogeneity-based Relational IDentification of Glycopeptide signals on Elution profile, Glyco-RIDGE). This method used accurate masses and retention times of glycopeptides, without requiring MS2, and could be applied to complex mixtures. To increase the number of identified peptide, fractionation of sample glycopeptides for reduction of sample complexity is required. Therefore, in this study, glycopeptides were fractionated into four fractions by hydrophilic interaction chromatography, and each fraction was analyzed using the Glyco-RIDGE method. As a result, many glycopeptides having long glycans were enriched in the highest hydrophilic fraction. Based on the monosaccharide composition, these glycans were thought to be poly-N-acetyllactosamine (polylactosamine [pLN]), and 31 pLN-carrier proteins were identified in HL-60 cells. Gene ontology enrichment analysis revealed that pLN carriers included many molecules related to signal transduction, receptors, and cell adhesion. Thus, these findings provided important insights into the analysis of the glycoproteome using our novel Glyco-RIDGE method. Graphical Abstract ᅟ.


Sujet(s)
Glycoprotéines/composition chimique , Leucémie aiguë promyélocytaire/anatomopathologie , Polyosides/analyse , Chromatographie en phase liquide/méthodes , Glycopeptides/analyse , Cellules HL-60 , Humains , Interactions hydrophobes et hydrophiles , Spectrométrie de masse MALDI/méthodes
10.
Biochim Biophys Acta Gen Subj ; 1862(6): 1462-1471, 2018 06.
Article de Anglais | MEDLINE | ID: mdl-29580922

RÉSUMÉ

BACKGROUND: Glycosylation is highly susceptible to changes of the physiological conditions, and accordingly, is a potential biomarker associated with several diseases and/or longevity. Semi-supercentenarians (SSCs; older than 105 years) are thought to be a model of human longevity. Thus, we performed glycoproteomics using plasma samples of SSCs, and identified proteins and conjugated N-glycans that are characteristic of extreme human longevity. METHODS: Plasma proteins from Japanese semi-supercentenarians (SSCs, 106-109 years), aged controls (70-88 years), and young controls (20-38 years) were analysed by using lectin microarrays and liquid chromatography/mass spectrometry (LC/MS). Peak area ratios of glycopeptides to corresponding normalising peptides were subjected to orthogonal projections to latent structures discriminant analysis (OPLS-DA). Furthermore, plasma levels of clinical biomarkers were measured. RESULTS: We found two lectins such as Phaseolus vulgaris, and Erythrina cristagalli (ECA), of which protein binding were characteristically increased in SSCs. Peak area ratios of ECA-enriched glycopeptides were successfully discriminated between SSCs and controls using OPLS-DA, and indicated that tri-antennary and sialylated N-glycans of haptoglobin at Asn207 and Asn211 sites were characterized in SSCs. Sialylated glycans of haptoglobin are a potential biomarker of several diseases, such as hepatocellular carcinoma, liver cirrhosis, and IgA-nephritis. However, the SSCs analysed here did not suffer from these diseases. CONCLUSIONS: Tri-antennary and sialylated N-glycans on haptoglobin at the Asn207 and Asn211 sites were abundant in SSCs and characteristic of extreme human longevity. GENERAL SIGNIFICANCE: We found abundant glycans in SSCs, which may be associated with human longevity.


Sujet(s)
Marqueurs biologiques/sang , Protéines du sang/métabolisme , Glycopeptides/sang , Glycoprotéines/sang , Longévité/physiologie , Polyosides/sang , Protéomique/méthodes , Adulte , Facteurs âges , Sujet âgé , Sujet âgé de 80 ans ou plus , Études cas-témoins , Femelle , Glycosylation , Humains , Jeune adulte
11.
Sci Rep ; 8(1): 2719, 2018 02 09.
Article de Anglais | MEDLINE | ID: mdl-29426894

RÉSUMÉ

Fc-receptors for immunoglobulin G (FcγRs) mediate a variety of effector and regulatory mechanisms in the immune system. N-glycosylation of FcγRs critically affects their functions which is well exemplified by antibody-dependent cell-mediated cytotoxicity (ADCC) and phagocytosis mediated by homologous FcγRIIIa and FcγRIIIb, respectively. Although several reports describe N-glycosylation profiles of recombinant FcγRIII glycoproteins, much remains unknown regarding their native glycoforms. Here we performed site-specific N-glycosylation profiling of a soluble form of FcγRIIIb purified from human serum based on mass spectrometric analysis. Our data indicate a distinct and common tendency of the glycoforms exhibited at each N-glycosylation site between the native and the previously reported recombinant FcγRIII glycoproteins. Among the six N-glycosylation sites of serum soluble FcγRIIIb, Asn45 was shown to be exclusively occupied by high-mannose-type oligosaccharides, whereas the remaining sites were solely modified by the complex-type oligosaccharides with sialic acid and fucose residues. The results of our endogenous FcγRIII glycoform analyses are important for the optimization of therapeutic antibody efficacy.


Sujet(s)
Glycopeptides/analyse , Spectrométrie de masse/méthodes , Maturation post-traductionnelle des protéines , Récepteurs du fragment Fc des IgG/sang , Récepteurs du fragment Fc des IgG/isolement et purification , Séquence d'acides aminés , Protéines liées au GPI/sang , Protéines liées au GPI/isolement et purification , Glycosylation , Humains , Similitude de séquences
12.
PLoS Genet ; 13(4): e1006696, 2017 04.
Article de Anglais | MEDLINE | ID: mdl-28426790

RÉSUMÉ

The cytoplasmic peptide:N-glycanase (Ngly1 in mammals) is a de-N-glycosylating enzyme that is highly conserved among eukaryotes. It was recently reported that subjects harboring mutations in the NGLY1 gene exhibited severe systemic symptoms (NGLY1-deficiency). While the enzyme obviously has a critical role in mammals, its precise function remains unclear. In this study, we analyzed Ngly1-deficient mice and found that they are embryonic lethal in C57BL/6 background. Surprisingly, the additional deletion of the gene encoding endo-ß-N-acetylglucosaminidase (Engase), which is another de-N-glycosylating enzyme but leaves a single GlcNAc at glycosylated Asn residues, resulted in the partial rescue of the lethality of the Ngly1-deficient mice. Additionally, we also found that a change in the genetic background of C57BL/6 mice, produced by crossing the mice with an outbred mouse strain (ICR) could partially rescue the embryonic lethality of Ngly1-deficient mice. Viable Ngly1-deficient mice in a C57BL/6 and ICR mixed background, however, showed a very severe phenotype reminiscent of the symptoms of NGLY1-deficiency subjects. Again, many of those defects were strongly suppressed by the additional deletion of Engase in the C57BL/6 and ICR mixed background. The defects observed in Ngly1/Engase-deficient mice (C57BL/6 background) and Ngly1-deficient mice (C57BL/6 and ICR mixed background) closely resembled some of the symptoms of patients with an NGLY1-deficiency. These observations strongly suggest that the Ngly1- or Ngly1/Engase-deficient mice could serve as a valuable animal model for studies related to the pathogenesis of the NGLY1-deficiency, and that cytoplasmic ENGase represents one of the potential therapeutic targets for this genetic disorder.


Sujet(s)
Maladies génétiques congénitales/génétique , Mannosyl-glycoprotéine-endo-bêta-N-acétylgluco saminidase/génétique , Peptide-N4-(N-acetyl-beta-glucosaminyl) asparagine amidase/déficit , Peptide-N4-(N-acetyl-beta-glucosaminyl) asparagine amidase/génétique , Animaux , Cytoplasme/enzymologie , Maladies génétiques congénitales/thérapie , Glycosylation , Humains , Souris , Souris de lignée C57BL , Souris knockout , Modèles animaux , Peptide-N4-(N-acetyl-beta-glucosaminyl) asparagine amidase/métabolisme , Délétion de séquence/génétique
13.
Glycoconj J ; 34(6): 779-787, 2017 12.
Article de Anglais | MEDLINE | ID: mdl-27431816

RÉSUMÉ

Recently, we established two mouse monoclonal antibodies (R-10G and R-17F). The R-17F antibody (IgG1 subtype) exhibited a strong cytotoxic effect on hiPS/ES cells. The R-17F antigen isolated from a total lipid extract of hiPS (Tic) cells was identified as LNFP I (Fucα1-2Galß1-3GlcNAcß1-3Galß1-4Glc). In the present study, R-17F binding proteins were isolated from hiPS (Tic) cell lysates with an affinity column of R-17F. They gave one major R-17F positive band around 250 kDa, and several minor bands between 150 kDa and 25 kDa. The former band was identified as podocalyxin by LC/MS/MS after SDS-PAGE. Hapten inhibition studies on R-17F binding to R-17F column-purified proteins with various synthetic oligosaccharides revealed that the blood group H type 1 triaose structure (Fucα1-2Galß1-3GlcNAc) was the predominant epitope on all the R-17F binding proteins. These bands disappeared completely on digestion with α1-2 fucosidase, but not with α1-3/4 fucosidase. Upon PNGase F digestion, the R-17F positive band around and above 250 kDa did not show any change, while the minor bands between 150 kDa and 25 kDa disappeared completely, suggesting that the epitope is expressed on N-glycans in the latter and probably on O-glycans in the former. These results, together with those obtained in our previous studies on R-10G (Kawabe et al. Glycobiology, 23, 322-336 (2013)), indicated that both R-10G and R-17F epitopes are carried on the same podocalyxin molecule. The R-17F epitopes on these glycoproteins expressed on hiPS cells could be associated with the molecular mechanism underlying the carbohydrate-mediated cytotoxic activity of R-17F.


Sujet(s)
Système ABO de groupes sanguins/immunologie , Épitopes/immunologie , Glycoprotéines/immunologie , Cellules souches pluripotentes induites/immunologie , Système ABO de groupes sanguins/composition chimique , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/immunologie , Lignée cellulaire , Glycoprotéines/composition chimique , Humains
14.
Nat Commun ; 7: 11205, 2016 Apr 05.
Article de Anglais | MEDLINE | ID: mdl-27046227

RÉSUMÉ

Rheumatoid arthritis (RA)-associated IgG antibodies such as anti-citrullinated protein antibodies (ACPAs) have diverse glycosylation variants; however, key sugar chains modulating the arthritogenic activity of IgG remain to be clarified. Here, we show that reduced sialylation is a common feature of RA-associated IgG in humans and in mouse models of arthritis. Genetically blocking sialylation in activated B cells results in exacerbation of joint inflammation in a collagen-induced arthritis (CIA) model. On the other hand, artificial sialylation of anti-type II collagen antibodies, including ACPAs, not only attenuates arthritogenic activity, but also suppresses the development of CIA in the antibody-infused mice, whereas sialylation of other IgG does not prevent CIA. Thus, our data demonstrate that sialylation levels control the arthritogenicity of RA-associated IgG, presenting a potential target for antigen-specific immunotherapy.


Sujet(s)
Arthrite expérimentale/immunologie , Polyarthrite rhumatoïde/immunologie , Autoanticorps/immunologie , Immunoglobuline G/immunologie , Maturation post-traductionnelle des protéines , Séquence d'acides aminés , Animaux , Arthrite expérimentale/métabolisme , Arthrite expérimentale/anatomopathologie , Polyarthrite rhumatoïde/métabolisme , Polyarthrite rhumatoïde/anatomopathologie , Autoanticorps/composition chimique , Autoanticorps/métabolisme , Séquence glucidique , Collagène de type II/immunologie , Collagène de type II/métabolisme , Humains , Immunoglobuline G/composition chimique , Immunoglobuline G/métabolisme , Souris , Souris de lignée C57BL , Souris de lignée DBA , Souris transgéniques , Données de séquences moléculaires , Acides sialiques/immunologie , Acides sialiques/métabolisme
15.
Proteomics ; 16(1): 47-59, 2016 Jan.
Article de Anglais | MEDLINE | ID: mdl-26439794

RÉSUMÉ

Some aberrant N-glycosylations are being used as tumor markers, and glycoproteomics is expected to provide novel diagnosis markers and targets of drug developments. However, one has trouble in mass spectrometric glycoproteomics of membrane fraction because of lower intensity of glycopeptides in the existence of surfactants. Previously, we developed a glycopeptide enrichment method by acetone precipitation, and it was successfully applied to human serum glycoproteomics. In this study, we confirmed that this method is useful to remove the surfactants and applicable to membrane glycoproteomics. The glycoproteomic approach to the human fetal lung fibroblasts membrane fraction resulted in the identification of over 272 glycoforms on 63 sites of the 44 glycoproteins. According to the existing databases, the structural features on 41 sites are previously unreported. The most frequently occurring forms at N-glycosylation site were high-mannose type containing nine mannose residues (M9) and monosialo-fucosylated biantennary oligosaccharides. Several unexpected N-glycans, such as fucosylated complex-type and fucosylated high-mannose and/or fucosylated pauci-mannose types were found in ER and lysosome proteins. Our method provides new insights into transport, biosynthesis, and degradation of glycoproteins.


Sujet(s)
Fibroblastes/composition chimique , Glycoprotéines/composition chimique , Poumon/cytologie , Protéines membranaires/composition chimique , Séquence glucidique , Lignée cellulaire , Chromatographie en phase liquide/méthodes , Glycosylation , Humains , Données de séquences moléculaires , Protéomique/méthodes , Spectrométrie de masse en tandem/méthodes
16.
PLoS One ; 10(11): e0142645, 2015.
Article de Anglais | MEDLINE | ID: mdl-26559536

RÉSUMÉ

An N-glycomic analysis of plasma proteins was performed in Japanese semisupercentenarians (SSCs) (mean 106.7 years), aged controls (mean 71.6 years), and young controls (mean 30.2 years) by liquid chromatography/mass spectrometry (LC/MS) using a graphitized carbon column. Characteristic N-glycans in SSCs were discriminated using a multivariate analysis; orthogonal projections to latent structures (O-PLS). The results obtained showed that multi-branched and highly sialylated N-glycans as well as agalacto- and/or bisecting N-glycans were increased in SSCs, while biantennary N-glycans were decreased. Since multi-branched and highly sialylated N-glycans have been implicated in anti-inflammatory activities, these changes may play a role in the enhanced chronic inflammation observed in SSCs. The levels of inflammatory proteins, such as CRP, adiponectin, IL-6, and TNF-α, were elevated in SSCs. These results suggested that responses to inflammation may play an important role in extreme longevity and healthy aging in humans. This is the first study to show that the N-glycans of plasma proteins were associated with extreme longevity and healthy aging in humans.


Sujet(s)
Protéines du sang/métabolisme , Glycomique , Adulte , Sujet âgé , Sujet âgé de 80 ans ou plus , Asiatiques , Protéines du sang/analyse , Séquence glucidique , Chromatographie en phase liquide à haute performance , Femelle , Glycosylation , Humains , Japon , Longévité , Analyse multifactorielle , Analyse en composantes principales , Spectrométrie de masse MALDI
17.
J Biol Chem ; 290(47): 28428-28437, 2015 Nov 20.
Article de Anglais | MEDLINE | ID: mdl-26442586

RÉSUMÉ

During translation, stop codon read-through occasionally happens when the stop codon is misread, skipped, or mutated, resulting in the production of aberrant proteins with C-terminal extension. These extended proteins are potentially deleterious, but their regulation is poorly understood. Here we show in vitro and in vivo evidence that mouse cFLIP-L with a 46-amino acid extension encoded by a read-through mutant gene is rapidly degraded by the ubiquitin-proteasome system, causing hepatocyte apoptosis during embryogenesis. The extended peptide interacts with an E3 ubiquitin ligase, TRIM21, to induce ubiquitylation of the mutant protein. In humans, 20 read-through mutations are related to hereditary disorders, and extended peptides found in human PNPO and HSD3B2 similarly destabilize these proteins, involving TRIM21 for PNPO degradation. Our findings indicate that degradation of aberrant proteins with C-terminal extension encoded by read-through mutant genes is a mechanism for loss of function resulting in hereditary disorders.


Sujet(s)
Protéine de régulation de l'apoptose CASP8 et FADD-like/génétique , Codon stop , Maladies génétiques congénitales/génétique , Mutation , Proteasome endopeptidase complex/métabolisme , Ubiquitine/métabolisme , Animaux , Protéine de régulation de l'apoptose CASP8 et FADD-like/métabolisme , Homozygote , Souris , Souches mutantes de souris , Liaison aux protéines , Ribonucléoprotéines/métabolisme
18.
MAbs ; 7(6): 1138-50, 2015.
Article de Anglais | MEDLINE | ID: mdl-26261057

RÉSUMÉ

In response to the successful use of monoclonal antibodies (mAbs) in the treatment of various diseases, systems for expressing recombinant mAbs using transgenic animals or plants have been widely developed. The silkworm (Bombyx mori) is a highly domesticated insect that has recently been used for the production of recombinant proteins. Because of their cost-effective breeding and relatively easy production scale-up, transgenic silkworms show great promise as a novel production system for mAbs. In this study, we established a transgenic silkworm stably expressing a human-mouse chimeric anti-CD20 mAb having the same amino acid sequence as rituximab, and compared its characteristics with rituximab produced by Chinese hamster ovary (CHO) cells (MabThera®). The anti-CD20 mAb produced in the transgenic silkworm showed a similar antigen-binding property, but stronger antibody-dependent cell-mediated cytotoxicity (ADCC) and weaker complement-dependent cytotoxicity (CDC) compared to MabThera. Post-translational modification analysis was performed by peptide mapping using liquid chromatography/mass spectrometry. There was a significant difference in the N-glycosylation profile between the CHO- and the silkworm-derived mAbs, but not in other post-translational modifications including oxidation and deamidation. The mass spectra of the N-glycosylated peptide revealed that the observed biological properties were attributable to the characteristic N-glycan structures of the anti-CD20 mAbs produced in the transgenic silkworms, i.e., the lack of the core-fucose and galactose at the non-reducing terminal. These results suggest that the transgenic silkworm may be a promising expression system for the tumor-targeting mAbs with higher ADCC activity.


Sujet(s)
Anticorps monoclonaux/immunologie , Spécificité des anticorps/immunologie , Antigènes CD20/immunologie , Bombyx/génétique , Protéines recombinantes/immunologie , Animaux , Animal génétiquement modifié , Anticorps monoclonaux/génétique , Anticorps monoclonaux/métabolisme , Cytotoxicité à médiation cellulaire dépendante des anticorps/immunologie , Cellules CHO , Lignée cellulaire tumorale , Chromatographie en phase liquide , Protéines du système du complément/immunologie , Cricetinae , Cricetulus , Cytotoxicité immunologique/immunologie , Glycosylation , Humains , Spectrométrie de masse , Souris , Protéines recombinantes/métabolisme , Rituximab/génétique , Rituximab/immunologie , Rituximab/métabolisme
19.
J Biol Chem ; 289(50): 34627-41, 2014 Dec 12.
Article de Anglais | MEDLINE | ID: mdl-25344606

RÉSUMÉ

ß-Galactoside α2,6-sialyltranferase 1 (ST6GAL1) catalyzes the addition of terminal α2,6-sialylation to N-glycans. Increased expression of ST6GAL1 has been reported in diverse carcinomas and highly correlates with tumor progression. Here, we report that St6gal1 transcription and α2,6-sialylated N-glycans are up-regulated during TGF-ß-induced epithelial-mesenchymal transition (EMT) in GE11 cells, requiring the Sp1 element within the St6gal1 promoter. Knockdown of St6gal1 strongly suppressed TGF-ß-induced EMT with a concomitant increase in E-cadherin expression, a major determinant of epithelial cell adherens junctions. Conversely, overexpression of ST6GAL1 increased the turnover of cell surface E-cadherin and promoted TGF-ß-induced EMT. Overexpressing ß-galactoside α2,3-sialyltranferase 4 had little influence on EMT, indicating specificity for α2,6-sialylation. The basal mesenchymal phenotype of MDA-MB-231 human breast cancer cells was partially reversed by ST6GAL1 silencing. Moreover, ST6GAL1 knockdown inhibited the phosphorylation of Akt, but not Smad2, suggesting that ST6GAL1 contributes to EMT through a non-Smad signaling pathway. Taken together, our data indicate that ST6GAL1 promotes TGF-ß-dependent EMT as well as maintenance of the mesenchymal state by growth signaling, providing a plausible mechanism whereby up-regulated ST6GAL1 may promote malignant progression.


Sujet(s)
Antigènes CD/métabolisme , Transition épithélio-mésenchymateuse/effets des médicaments et des substances chimiques , Sialyltransferases/métabolisme , Facteur de croissance transformant bêta/pharmacologie , Antigènes CD/génétique , Sites de fixation , Tumeurs du sein/anatomopathologie , Cadhérines/métabolisme , Lignée cellulaire tumorale , Mouvement cellulaire/effets des médicaments et des substances chimiques , Évolution de la maladie , Techniques de knock-down de gènes , Extinction de l'expression des gènes , Humains , Phénotype , Régions promotrices (génétique)/génétique , Sialyltransferases/déficit , Sialyltransferases/génétique , Facteur de transcription Sp1/métabolisme , Activation de la transcription/effets des médicaments et des substances chimiques , Régulation positive/effets des médicaments et des substances chimiques
20.
J Biol Chem ; 289(30): 20694-705, 2014 Jul 25.
Article de Anglais | MEDLINE | ID: mdl-24895123

RÉSUMÉ

Recently, the Golgi phosphoprotein 3 (GOLPH3) and its yeast homolog Vps74p have been characterized as essential for the Golgi localization of glycosyltransferase in yeast. GOLPH3 has been identified as a new oncogene that is commonly amplified in human cancers to modulate mammalian target of rapamycin signaling. However, the molecular mechanisms of the carcinogenic signaling pathway remain largely unclear. To investigate whether the expression of GOLPH3 was involved in the glycosylation processes in mammalian cells, and whether it affected cell behavior, we performed a loss-of-function study. Cell migration was suppressed in GOLPH3 knockdown (KD) cells, and the suppression was restored by a re-introduction of the GOLPH3 gene. HPLC and LC/MS analysis showed that the sialylation of N-glycans was specifically decreased in KD cells. The specific interaction between sialyltransferases and GOLPH3 was important for the sialylation. Furthermore, overexpression of α2,6-sialyltransferase-I rescued cell migration and cellular signaling, both of which were blocked in GOLPH3 knockdown cells. These results are the first direct demonstration of the role of GOLPH3 in N-glycosylation to regulate cell biological functions.


Sujet(s)
Mouvement cellulaire/physiologie , Protéines membranaires/métabolisme , Acide N-acétyl-neuraminique/métabolisme , Phosphoprotéines/métabolisme , Protéines proto-oncogènes/métabolisme , Transduction du signal/physiologie , Techniques de knock-down de gènes , Glycosylation , Cellules HeLa , Humains , Protéines membranaires/génétique , Acide N-acétyl-neuraminique/génétique , Phosphoprotéines/génétique , Protéines proto-oncogènes/génétique , Sialyltransferases/génétique , Sialyltransferases/métabolisme ,
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