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1.
J Environ Sci (China) ; 146: 3-14, 2024 Dec.
Article de Anglais | MEDLINE | ID: mdl-38969459

RÉSUMÉ

Bacillus velezensis M3-1 strain isolated from the sediment of Myriophyllum aquatium constructed wetlands was found to efficiently convert NO3--N to NO2--N, and the requirements for carbon source addition were not very rigorous. This work demonstrates, for the first time, the feasibility of using the synergy of anammox and Bacillus velezensis M3-1 microorganisms for nitrogen removal. In this study, the possibility of M3-1 that converted NO3--N produced by anammox to NO2--N was verified in an anaerobic reactor. The NO3--N reduction ability of M3-1 and denitrifying bacteria in coupling system was investigated under different C/N conditions, and it was found that M3-1 used carbon sources preferentially over denitrifying bacteria. By adjusting the ratio of NH4+-N to NO2--N, it was found that the NO2--N converted from NO3--N by M3-1 participated in the original anammox.The nitrogen removal efficacy (NRE) of the coupled system was increased by 12.1%, compared to the control group anammox system at C/N = 2:1. Functional gene indicated that it might be a nitrate reducing bacterium.This study shows that the nitrate reduction rate achieved by the Bacillus velezensis M3-1 can be high enough for removing nitrate produced by anammox process, which would enable improve nitrogen removal from wastewater.


Sujet(s)
Ammoniac , Bacillus , Nitrates , Azote , Oxydoréduction , Bacillus/métabolisme , Azote/métabolisme , Nitrates/métabolisme , Ammoniac/métabolisme , Anaérobiose , Élimination des déchets liquides/méthodes , Dénitrification
2.
J Zhejiang Univ Sci B ; 25(6): 485-498, 2024 May 15.
Article de Anglais, Chinois | MEDLINE | ID: mdl-38910494

RÉSUMÉ

End-stage liver diseases, such as cirrhosis and liver cancer caused by hepatitis B, are often combined with hepatic encephalopathy (HE); ammonia poisoning is posited as one of its main pathogenesis mechanisms. Ammonia is closely related to autophagy, but the molecular mechanism of ammonia's regulatory effect on autophagy in HE remains unclear. Sialylation is an essential form of glycosylation. In the nervous system, abnormal sialylation affects various physiological processes, such as neural development and synapse formation. ST3 ß|-galactoside α2,|3-sialyltransferase 6 (ST3GAL6) is one of the significant glycosyltransferases responsible for adding α2,3-linked sialic acid to substrates and generating glycan structures. We found that the expression of ST3GAL6 was upregulated in the brains of mice with HE and in astrocytes after ammonia induction, and the expression levels of α2,3-sialylated glycans and autophagy-related proteins microtubule-associated protein light chain 3 (LC3) and Beclin-1 were upregulated in ammonia-induced astrocytes. These findings suggest that ST3GAL6 is related to autophagy in HE. Therefore, we aimed to determine the regulatory relationship between ST3GAL6 and autophagy. We found that silencing ST3GAL6 and blocking or degrading α2,3-sialylated glycans by way of Maackia amurensis lectin-II (MAL-II) and neuraminidase can inhibit autophagy. In addition, silencing the expression of ST3GAL6 can downregulate the expression of heat shock protein ß8 (HSPB8) and Bcl2-associated athanogene 3 (BAG3). Notably, the overexpression of HSPB8 partially restored the reduced autophagy levels caused by silencing ST3GAL6 expression. Our results indicate that ST3GAL6 regulates autophagy through the HSPB8-BAG3 complex.


Sujet(s)
Protéines régulatrices de l'apoptose , Autophagie , Encéphale , Encéphalopathie hépatique , Polyosides , Sialyltransferases , Sialyltransferases/métabolisme , Sialyltransferases/génétique , Animaux , Souris , Polyosides/métabolisme , Encéphalopathie hépatique/métabolisme , Protéines régulatrices de l'apoptose/métabolisme , Encéphale/métabolisme , Protéines adaptatrices de la transduction du signal/métabolisme , Protéines adaptatrices de la transduction du signal/génétique , Ammoniac/métabolisme , Astrocytes/métabolisme , Mâle , , Chaperons moléculaires/métabolisme , Protéines du choc thermique/métabolisme , Humains , Extinction de l'expression des gènes , Protéines associées aux microtubules/métabolisme , Souris de lignée C57BL
3.
Clin Transl Gastroenterol ; 15(6): e1, 2024 Jun 01.
Article de Anglais | MEDLINE | ID: mdl-38916234

RÉSUMÉ

High-protein diet is the cornerstone of supportive care for patients living with hepatic encephalopathy. Although any protein source is better than protein restriction, there is uncertainty regarding the benefits of specific protein types. Using a randomized trial, Badal et al. evaluate the effect on ammonia levels and metabolomics from 3 protein sources in burgers made from beef, vegan products, and vegetarian products. The vegan and vegetarian burgers did not raise ammonia and may result in favorable metabolomic profiles.


Sujet(s)
Ammoniac , Régime végétalien , Régime végétarien , Encéphalopathie hépatique , Humains , Encéphalopathie hépatique/diétothérapie , Encéphalopathie hépatique/étiologie , Régime végétarien/effets indésirables , Régime végétalien/effets indésirables , Ammoniac/métabolisme , Protéines alimentaires/administration et posologie , Essais contrôlés randomisés comme sujet , Encéphale/métabolisme , Régime riche en protéines/effets indésirables , Métabolomique
4.
J Phys Chem B ; 128(24): 5840-5845, 2024 Jun 20.
Article de Anglais | MEDLINE | ID: mdl-38850249

RÉSUMÉ

Particulate MMO (pMMO) catalyzes the oxidation of methane to methanol and also ammonia to hydroxylamine. Experimental characterization of the active site has been very difficult partly because the enzyme is membrane-bound. However, recently, there has been major progress mainly through the use of cryogenic electron microscopy (cryoEM). Electron paramagnetic resonance (EPR) and X-ray spectroscopy have also been employed. Surprisingly, the active site has only one copper. There are two histidine ligands and one asparagine ligand, and the active site is surrounded by phenyl alanines but no charged amino acids in the close surrounding. The present study is the first quantum chemical study using a model of that active site (CuD). Low barrier mechanisms have been found, where an important part is that there are two initial proton-coupled electron transfer steps to a bound O2 ligand before the substrate enters. Surprisingly, this leads to large radical character for the oxygens even though they are protonated. That result is very important for the ability to accept a proton from the substrates. Methods have been used which have been thoroughly tested for redox enzyme mechanisms.


Sujet(s)
Ammoniac , Méthane , Oxydoréduction , Oxygénases , Méthane/composition chimique , Méthane/métabolisme , Oxygénases/métabolisme , Oxygénases/composition chimique , Ammoniac/composition chimique , Ammoniac/métabolisme , Domaine catalytique , Modèles moléculaires , Spectroscopie de résonance de spin électronique
5.
Microbiol Spectr ; 12(7): e0390223, 2024 Jul 02.
Article de Anglais | MEDLINE | ID: mdl-38842310

RÉSUMÉ

Cryptococcus neoformans and Cryptococcus gattii are both known urease producers and have the potential to cause hyperammonemia. We hypothesized that the risk of hyperammonemia is increased by renal failure, burden of cryptococcal infection, and fungal strain characteristics. We performed a retrospective review of plasma ammonia levels in patients with cryptococcal infections. Risk factors for hyperammonemia were statistically compared between patients with and without hyperammonemia (>53 µmol/L). Cryptococcal cells from three patients included in the study were recovered from our biorepository. Strain characteristics including urease activity, ammonia production, growth curves, microscopy, melanin production, and M13 molecular typing were analyzed and compared with a wild-type (WT) C. neoformans strain. We included 29 patients, of whom 37.9% had hyperammonemia, 59% had disseminated cryptococcal infection (DCI), and 41% had isolated central nervous system infection. Thirty-eight percent of patients had renal failure and 28% had liver disease. Renal failure was associated with 4.4 times (95% confidence interval [CI] 1.5, 13.0) higher risk of hyperammonemia. This risk was higher in DCIs (RR 6.2, 95% CI 1.0, 40.2) versus isolated cryptococcal meningitis (RR 2.5, 95% CI, 0.40, 16.0). Liver disease and cryptococcal titers were not associated with hyperammonemia. C. neoformans from one patient with extreme hyperammonemia demonstrated a 4- to 5-fold increase in extracellular urease activity, slow growth, enlarged cell size phenotypes, and diminished virulence factors. Hyperammonemia was strongly associated with renal failure in individuals with DCI, surpassing associations with liver failure or cryptococcal titers. However, profound hyperammonemia in one patient was attributable to high levels of urease secretion unique to that cryptococcal strain. Prospective studies are crucial to exploring the significance of this association.IMPORTANCECryptococcus produces and secretes the urease enzyme to facilitate its colonization of the host. Urease breaks down urea into ammonia, overwhelming the liver's detoxification process and leading to hyperammonemia in some hosts. This underrecognized complication exacerbates organ dysfunction alongside the infection. Our study investigated this intricate relationship, uncovering a strong association between the development of hyperammonemia and renal failure in patients with cryptococcal infections, particularly those with disseminated infections. We also explore mechanisms underlying increased urease activity, specifically in strains associated with extreme hyperammonemia. Our discoveries provide a foundation for advancing research into cryptococcal metabolism and identifying therapeutic targets to enhance patient outcomes.


Sujet(s)
Cryptococcose , Cryptococcus gattii , Cryptococcus neoformans , Hyperammoniémie , Urease , Humains , Cryptococcose/microbiologie , Hyperammoniémie/microbiologie , Hyperammoniémie/étiologie , Femelle , Études rétrospectives , Mâle , Adulte d'âge moyen , Urease/métabolisme , Adulte , Sujet âgé , Ammoniac/métabolisme , Facteurs de risque , Insuffisance rénale/complications , Insuffisance rénale/microbiologie , Sujet âgé de 80 ans ou plus
6.
Ying Yong Sheng Tai Xue Bao ; 35(5): 1242-1250, 2024 May.
Article de Chinois | MEDLINE | ID: mdl-38886422

RÉSUMÉ

In this study, we used a high-throughput sequencing technology to survey the dry-wet seasonal change characteristics of soil ammonia-oxidizing bacteria (AOB) communities in the three restoration stages [i.e., Mallotus paniculatus community (early stage), Millettia leptobotrya community (middle stage), and Syzygium oblatum community (later stage)] of Xishuangbanna tropical forest ecosystems. We analyzed the effects of soil physicochemical characteristics on AOB community composition and diversity during tropical forest restoration. The results showed that tropical forest restoration significantly affected the relative abundance of dominant AOB phyla and their dry-wet seasonal variation. The maximum relative abundance of Proteobacteria (71.3%) was found in the early recovery stage, while that of Actinobacteria was found in the late recovery stage (1.0%). The abundances of Proteobacteria and Actinobacteria had the maximum ranges of dry-wet seasonal variation in the early and late stages, respectively. The abundance of dominant AOB genera and its dry-wet seasonal variation varied across tropical forest restoration stages. The maximum average relative abundance of Nitrosospira and Nitrosomonas in the late recovery stage was 66.2% and 1.5%, respectively. In contrast, the abundance of Nitrosovibrio reached its maximum (25.6%) in the early recovery stage. The maximum dry-wet seasonal variation in relative abundance of Nitrosospira and Nitrosomonas occurred in the early recovery stage, while that of Nitrosovibrio occurred in the middle recovery stage. The Chao1, Shannon, and Simpson diversity indices of AOB communities increased along the restoration stages, which were significantly higher in the wet season than in the dry season. The results of canonical correspondence analysis showed that soil easily oxidized carbon was the main factor controlling AOB community diversity and Actinobacteria abundance. Soil bulk density and temperature were the main factors affecting Proteobacteria abundance. Soil pH, microbial biomass carbon, water content, ammonium nitrogen, bulk density, and temperature were the main factors controlling the abundances of Nitrosospira, Nitrosomonas, and Nitrosovibrio. Therefore, tropical forest restoration can regulate the change of relative abundance of dominant AOB taxa via mediating the changes of soil temperature, bulk density, and readily oxidized carbon, leading to an increase in soil AOB community diversity.


Sujet(s)
Ammoniac , Bactéries , Forêts , Oxydoréduction , Saisons , Microbiologie du sol , Climat tropical , Ammoniac/métabolisme , Bactéries/classification , Bactéries/métabolisme , Bactéries/isolement et purification , Bactéries/génétique , Bactéries/croissance et développement , Proteobacteria/isolement et purification , Proteobacteria/classification , Proteobacteria/métabolisme , Proteobacteria/génétique , Chine , Conservation des ressources naturelles , Assainissement et restauration de l'environnement/méthodes , Nitrosomonas/métabolisme , Nitrosomonas/classification , Nitrosomonas/croissance et développement , Forêt pluviale
7.
Ying Yong Sheng Tai Xue Bao ; 35(5): 1283-1292, 2024 May.
Article de Chinois | MEDLINE | ID: mdl-38886427

RÉSUMÉ

To investigate the effects of different irrigation and nitrogen application modes on nitrogen gaseous loss in winter wheat farmland, we conducted a field experiment at Changqing Irrigation Experiment Station in Shandong Province, with two irrigation levels (80%-90% θf(I1) and 70%-80% θf(I2)) and three nitrogen application levels (conventional nitrogen application of 240 kg·hm-2(N1), nitrogen reduction of 12.5% (N2), and nitrogen reduction of 25% (N3)). The results showed that ammonia volatilization and nitrous oxide emission rate peak appeared within 2-4 days after fertilization or irrigation. The ammonia volatilization rate during the chasing fertilizer period was significantly higher than that during the basal fertilizer period. Compared with other treatments, the ave-rage ammonia volatilization rate of I2N2 treatment during the chasing fertilizer period was reduced by 10.1%-51.6%, and the average nitrous oxide emission rate over the whole growth period was reduced by 15.4%-52.2%. The ammonia volatilization rate was significantly positively associated with surface soil pH value and ammonium nitrogen content, while the nitrous oxide emission rate was significantly positively associated with nitrate content in topsoil. The accumulation amount of soil ammonia volatilization and nitrous oxide emission ranged from 0.83-1.42 and 0.11-0.33 kg·hm-2, respectively. Moderate reduction of irrigation water and nitrogen input could effectively reduce cumulative amounts of ammonia volatilization and nitrous oxide emission from winter wheat farmland. The cumulative amounts of ammonia volatilization and nitrous oxide emission under I1N3 and I2N2 treatments were signi-ficantly lower than those under other treatments. The highest winter wheat yield (5615.6 kg·hm-2) appeared in I2N2 treatment. The irrigation water utilization efficiency of I2 was significantly higher than that of I1, with the maximum increase rate of 45.2%. Compared with N1 and N3 treatments, the maximum increase rate of nitrogen fertilizer productivity and agricultural utilization efficiency in N2 reached 15.2% and 31.8%, respectively. In conclusion, the treatment with 70%-80% θf irrigation level and 210 kg·hm-2 nitrogen input could effectively improve the utilization efficiency of irrigation water and nitrogen fertilization and reduce gaseous loss from winter wheat farmland.


Sujet(s)
Ammoniac , Engrais , Azote , Protoxyde d'azote , Triticum , Eau , Triticum/croissance et développement , Triticum/métabolisme , Protoxyde d'azote/analyse , Protoxyde d'azote/métabolisme , Azote/analyse , Azote/métabolisme , Ammoniac/analyse , Ammoniac/métabolisme , Chine , Eau/analyse , Eau/métabolisme , Irrigation agricole/méthodes , Saisons , Biomasse , Sol/composition chimique
8.
Sci Rep ; 14(1): 13868, 2024 06 15.
Article de Anglais | MEDLINE | ID: mdl-38879696

RÉSUMÉ

The purpose of this research was to examine the potential effects of bentonite (BN) supplemented diets on growth, feed utilization, blood biochemistry, and histomorphology of Dicentrarchus labrax. Six treatments in triplicate were tested: B0, B0.5, B1.0, B1.5, B3.0, and B4.5, which represented fish groups fed diets supplemented with 0, 0.5, 1, 1.5, 3, and 4.5% BN, respectively. For 84 days, juveniles' seabass (initial weight = 32.73 g) were fed diets containing 46% protein, three times daily at 3% of body weight. With a 5% daily water exchange, underground seawater (32 ppt) was used. Findings revealed significant improvements in water quality (TAN and NH3), growth (FW, WG and SGR) and feed utilization (FCR, PER and PPV) in fish fed BN-supplemented diets, with the best values in favor of the B1.5 group. Additional enhancements in kidney function indicators (urea and uric acid) and liver enzymes were observed in fish of the BN-treated groups along with a decrease in cholesterol level in the B1.5 group. Further improvements in fish innate immunity (hemoglobin, red blood cells, glucose, total protein, globulin, and immunoglobulin IgM), antioxidant activity (total antioxidative capacity and catalase), and decreased cortisol levels in fish of the BN-treated groups. Histological examinations of the anterior and posterior intestines and liver in groups B1.5 and B3 revealed the healthiest organs. This study recommends BN at a concentration of 1.5% as a feed additive in the Dicentrarchus labrax diet.


Sujet(s)
Ammoniac , Aliment pour animaux , Antioxydants , Serran , Bentonite , Compléments alimentaires , Animaux , Serran/immunologie , Serran/croissance et développement , Serran/métabolisme , Antioxydants/métabolisme , Bentonite/pharmacologie , Bentonite/administration et posologie , Ammoniac/métabolisme , Aliment pour animaux/analyse , Régime alimentaire/médecine vétérinaire
9.
Molecules ; 29(11)2024 May 30.
Article de Anglais | MEDLINE | ID: mdl-38893444

RÉSUMÉ

Leach bed reactors (LBRs) are dry anaerobic systems that can handle feedstocks with high solid content, like chicken manure, with minimal water addition. In this study, the chicken manure was mixed with zeolite, a novel addition, and packed in the LBR to improve biogas production. The resulting leachate was then processed in a continuous stirred tank reactor (CSTR), where most of the methane was produced. The supernatant of the CSTR was returned to the LBR. The batch mode operation of the LBR led to a varying methane production rate (MPR) with a peak in the beginning of each batch cycle when the leachate was rich in organic matter. Comparing the MPR in both systems, the peaks in the zeolite system were higher and more acute than in the control system, which was under stress, as indicated by the acetate accumulation at 2328 mg L-1. Moreover, the presence of zeolite in the LBR played a crucial role, increasing the overall methane yield from 0.142 (control experiment) to 0.171 NL CH4 per g of volatile solids of chicken manure entering the system at a solid retention time of 14 d. Zeolite also improved the stability of the system. The ammonia concentration increased gradually due to the little water entering the system and reached 3220 mg L-1 (control system) and 2730 mg L-1 (zeolite system) at the end of the experiment. It seems that zeolite favored the accumulation of the ammonia at a lower rate (14.0 mg L-1 d-1) compared to the control experiment (17.3 mg L-1 d-1). The microbial analysis of the CSTR fed on the leachate from the LBR amended with zeolite showed a higher relative abundance of Methanosaeta (83.6%) compared to the control experiment (69.1%). Both CSTRs established significantly different bacterial profiles from the inoculum after 120 days of operation (p < 0.05). Regarding the archaeal communities, there were no significant statistical differences between the CSTRs and the inoculum (p > 0.05).


Sujet(s)
Dépollution biologique de l'environnement , Poulets , Fumier , Méthane , Zéolites , Zéolites/composition chimique , Animaux , Anaérobiose , Méthane/métabolisme , Méthane/composition chimique , Bioréacteurs , Biocarburants , Ammoniac/composition chimique , Ammoniac/métabolisme
10.
Methods Mol Biol ; 2792: 131-142, 2024.
Article de Anglais | MEDLINE | ID: mdl-38861084

RÉSUMÉ

Ammonia (NH3) is released from the leaves to the atmosphere when atmospheric NH3 concentration is low; in contrast, when atmospheric NH3 concentration is high, NH3 in the atmosphere is absorbed by the leaves. Some previous studies have examined relationships of such NH3 gas exchange with photorespiration, because a NH3 production reaction is involved in the photorespiratory pathway. NH3 compensation point (χNH3) is known as a parameter that represents an NH3 emission potential of the leaves. Two main procedures for determining the χNH3: "gas exchange method" and "apoplast extraction method" are explained in this chapter.


Sujet(s)
Ammoniac , Feuilles de plante , Ammoniac/métabolisme , Ammoniac/analyse , Feuilles de plante/métabolisme , Feuilles de plante/composition chimique , Photosynthèse
11.
Appl Microbiol Biotechnol ; 108(1): 389, 2024 Jun 21.
Article de Anglais | MEDLINE | ID: mdl-38904674

RÉSUMÉ

Direct ammonia oxidation (Dirammox) might be of great significance to advance the innovation of biological nitrogen removal process in wastewater treatment systems. However, it remains unknown whether Dirammox bacteria can be selectively enriched in activated sludge. In this study, a lab-scale bioreactor was established and operated for 2 months to treat synthetic wastewater with hydroxylamine as a selection pressure. Three Dirammox strains (Alcaligenes aquatilis SDU_AA1, Alcaligenes aquatilis SDU_AA2, and Alcaligenes sp. SDU_A2) were isolated from the activated sludge, and their capability to perform Dirammox process was confirmed. Although these three Dirammox bacteria were undetectable in the seed sludge (0%), their relative abundances rapidly increased after a month of operation, reaching 12.65%, 0.69%, and 0.69% for SDU_A2, SDU_AA1, and SDU_AA2, respectively. Among them, the most dominant Dirammox (SDU_A2) exhibited higher nitrogen removal rate (32.35%) than the other two strains (13.57% of SDU_AA1 and 14.52% of SDU_AA2). Comparative genomic analysis demonstrated that the most dominant Dirammox bacterium (SDU_A2) possesses fewer complete metabolic modules compared to the other two less abundant Alcaligenes strains. Our findings expanded the understanding of the application of Dirammox bacteria as key functional microorganisms in a novel biological nitrogen and carbon removal process if they could be well stabilized. KEY POINTS: • Dirammox-dominated microbial community was enriched in activated sludge bioreactor. • The addition of hydroxylamine played a role in Dirammox enrichment. • Three Dirammox bacterial strains, including one novel species, were isolated.


Sujet(s)
Alcaligenes , Bioréacteurs , Azote , Oxydoréduction , Eaux usées , Eaux usées/microbiologie , Eaux usées/composition chimique , Bioréacteurs/microbiologie , Azote/métabolisme , Alcaligenes/métabolisme , Alcaligenes/isolement et purification , Alcaligenes/génétique , Eaux d'égout/microbiologie , Ammoniac/métabolisme , Purification de l'eau/méthodes , Hydroxylamine/métabolisme , Phylogenèse , ARN ribosomique 16S/génétique , Bactéries/métabolisme , Bactéries/classification , Bactéries/génétique , Bactéries/isolement et purification , Microbiote
12.
J Hazard Mater ; 474: 134827, 2024 Aug 05.
Article de Anglais | MEDLINE | ID: mdl-38850953

RÉSUMÉ

In our work, a gravity-driven ceramic membrane bioreactor (GDCMBR) was developed to remove Mn2+ and NH3-N simultaneously through the birnessite water purification layer in-situ construction on the ceramic membrane due to chemical pre-oxidation (powdered activated carbon (PAC)-MnOx). Considering the trade-off of biofouling and water production, the daily intermittent short-term vertical aeration mode was involving to balance this contradiction with the excellent water purification and improved membrane permeability. And the GDCMBR permeability of operation flux was improved for 5-7 LHM with intermittent short-term vertical aeration. Furthermore, only ∼7 % irreversible membrane resistance (Rir) also confirmed the improved membrane permeability with intermittent short-term vertical aeration. And some manganese oxidizing bacteria (MnOB) and ammonia oxidizing bacteria (AOB) species at genus level were identified during long-term operation with the contact circulating flowing raw water, resulting in the better Mn2+ and NH3-N removal efficiency. Additionally, the nano-flower-like birnessite water purification layer was verified in ceramsite@PAC-MnOx coupled GDCMBR, which evolute into a porous flake-like structure with the increasing intermittent short-term aeration duration. Therefore, the sustainable and effective intermittent short-term aeration mode in ceramsite@PAC-MnOx coupled GDCMBR could improve the membrane permeability with the satisfactory groundwater purification efficiency, as well as providing an energy-efficient strategy for membrane technologies applications in water supply safety.


Sujet(s)
Ammoniac , Céramiques , Manganèse , Membrane artificielle , Perméabilité , Céramiques/composition chimique , Manganèse/composition chimique , Ammoniac/composition chimique , Ammoniac/métabolisme , Purification de l'eau/méthodes , Bioréacteurs , Charbon de bois/composition chimique , Oxydes/composition chimique , Polluants chimiques de l'eau/métabolisme , Polluants chimiques de l'eau/composition chimique , Azote/composition chimique , Azote/métabolisme , Composés du manganèse/composition chimique , Gravitation , Bactéries/métabolisme
13.
Chemosphere ; 361: 142568, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-38851510

RÉSUMÉ

Biotrickling filter (BTF) is often used for purification of waste gas from swine houses, with vital information still needed regarding interaction effects among multiple gas pollutants removal and also the formation of byproducts especially nitrous oxide (N2O, a strong greenhouse gas) due to the relative high NH3 concentration level compared to other gases. In this study, gas removal and N2O production were compared between two BTFs, where the inlet gas of BTF-1 contained NH3 and H2S while p-cresol was additionally supplied to BTF-2. At inlet load (IL) between 3.67 and 18.91 g m-3 h-1, removal efficiencies of NH3 exceeded 95% for both BTFs. As alternative strategy, adding thiosulfate improved H2S removal. Interestingly, presence of p-cresol to some extent promoted H2S removal at IL of 0.56 g m-3 h-1possibly due to effect on pH value of circulating solution. Similar to NH3, removal efficiencies of p-cresol were higher than 95% at an average IL of 2.98 g m-3 h-1. Gas residence time, pH of circulating solution and inlet loading were identified as key factors affecting BTF performance, but the response of individual gas compound to these factors was not consistent. Overall, p-cresol enhanced N2O generation although the effects were not always significant. High-throughput sequencing results showed that Proteobacteria accounted for the largest proportion of relative abundance and BTF-2 had much richer microbial diversity compared to BTF-1. Thermomonas, Comamonas, Rhodanobacter and other bacterial genus capable of denitrification were detected in both BTFs, and their corresponding abundances in BTF-2 (10.9%, 8.7% and 5.2%) were all greater than those in BTF-1 (0.4%, 0.3% and 2.0%), indicating that more denitrification may occur within BTF-2 and higher N2O could have been generated. This study provided evidence that organic gas components, served as carbon source, may increase the N2O production from BTF when treating waste gases containing NH3.


Sujet(s)
Polluants atmosphériques , Ammoniac , Crésols , Sulfure d'hydrogène , Protoxyde d'azote , Ammoniac/métabolisme , Crésols/métabolisme , Protoxyde d'azote/métabolisme , Sulfure d'hydrogène/métabolisme , Polluants atmosphériques/métabolisme , Suidae , Animaux , Filtration/méthodes , Dépollution biologique de l'environnement
14.
Nature ; 630(8015): 230-236, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38811725

RÉSUMÉ

Nitrosopumilus maritimus is an ammonia-oxidizing archaeon that is crucial to the global nitrogen cycle1,2. A critical step for nitrogen oxidation is the entrapment of ammonium ions from a dilute marine environment at the cell surface and their subsequent channelling to the cell membrane of N. maritimus. Here we elucidate the structure of the molecular machinery responsible for this process, comprising the surface layer (S-layer), using electron cryotomography and subtomogram averaging from cells. We supplemented our in situ structure of the ammonium-binding S-layer array with a single-particle electron cryomicroscopy structure, revealing detailed features of this immunoglobulin-rich and glycan-decorated S-layer. Biochemical analyses showed strong ammonium binding by the cell surface, which was lost after S-layer disassembly. Sensitive bioinformatic analyses identified similar S-layers in many ammonia-oxidizing archaea, with conserved sequence and structural characteristics. Moreover, molecular simulations and structure determination of ammonium-enriched specimens enabled us to examine the cation-binding properties of the S-layer, revealing how it concentrates ammonium ions on its cell-facing side, effectively acting as a multichannel sieve on the cell membrane. This in situ structural study illuminates the biogeochemically essential process of ammonium binding and channelling, common to many marine microorganisms that are fundamental to the nitrogen cycle.


Sujet(s)
Ammoniac , Organismes aquatiques , Archéobactéries , Membrane cellulaire , Ammoniac/composition chimique , Ammoniac/métabolisme , Organismes aquatiques/composition chimique , Organismes aquatiques/métabolisme , Organismes aquatiques/ultrastructure , Archéobactéries/composition chimique , Archéobactéries/métabolisme , Archéobactéries/ultrastructure , Cations/composition chimique , Cations/métabolisme , Cryomicroscopie électronique , Modèles moléculaires , Oxydoréduction , Polyosides/métabolisme , Polyosides/composition chimique
15.
Clin Transl Gastroenterol ; 15(6): e1, 2024 Jun 01.
Article de Anglais | MEDLINE | ID: mdl-38696431

RÉSUMÉ

INTRODUCTION: Diet can affect ammoniagenesis in cirrhosis and hepatic encephalopathy (HE), but the impact of dietary preferences on metabolomics in cirrhosis is unclear. As most Western populations follow meat-based diets, we aimed to determine the impact of substituting a single meat-based meal with an equal protein-containing vegan/vegetarian alternative on ammonia and metabolomics in outpatients with cirrhosis on a meat-based diet. METHODS: Outpatients with cirrhosis with and without prior HE on a stable Western meat-based diet were randomized 1:1:1 into 3 groups. Patients were given a burger with 20 g protein of meat, vegan, or vegetarian. Blood for metabolomics via liquid chromatography-mass spectrometry and ammonia was drawn at baseline and hourly for 3 hours after meal while patients under observation. Stool microbiome characteristics, changes in ammonia, and metabolomics were compared between/within groups. RESULTS: Stool microbiome composition was similar at baseline. Serum ammonia increased from baseline in the meat group but not the vegetarian or vegan group. Metabolites of branched chain and acylcarnitines decreased in the meat group compared with the non-meat groups. Alterations in lipid profile (higher sphingomyelins and lower lysophospholipids) were noted in the meat group when compared with the vegan and vegetarian groups. DISCUSSION: Substitution of a single meat-based meal with a non-meat alternatives results in lower ammoniagenesis and altered serum metabolomics centered on branched-chain amino acids, acylcarnitines, lysophospholipids, and sphingomyelins in patients with cirrhosis regardless of HE or stool microbiome. Intermittent meat substitution with vegan or vegetarian alternatives could be helpful in reducing ammonia generation in cirrhosis.


Sujet(s)
Ammoniac , Régime végétalien , Régime végétarien , Fèces , Microbiome gastro-intestinal , Encéphalopathie hépatique , Cirrhose du foie , Métabolomique , Humains , Ammoniac/sang , Ammoniac/métabolisme , Cirrhose du foie/diétothérapie , Cirrhose du foie/métabolisme , Cirrhose du foie/sang , Mâle , Femelle , Adulte d'âge moyen , Encéphalopathie hépatique/diétothérapie , Encéphalopathie hépatique/sang , Encéphalopathie hépatique/étiologie , Fèces/composition chimique , Fèces/microbiologie , Sujet âgé , Carnitine/analogues et dérivés , Carnitine/sang , Carnitine/métabolisme , Viande , Acides aminés à chaine ramifiée/sang , Acides aminés à chaine ramifiée/métabolisme , Adulte
16.
J Neuroinflammation ; 21(1): 138, 2024 May 27.
Article de Anglais | MEDLINE | ID: mdl-38802927

RÉSUMÉ

Sepsis-associated encephalopathy (SAE) is a significant cause of mortality in patients with sepsis. Despite extensive research, its exact cause remains unclear. Our previous research indicated a relationship between non-hepatic hyperammonemia (NHH) and SAE. This study aimed to investigate the relationship between NHH and SAE and the potential mechanisms causing cognitive impairment. In the in vivo experimental results, there were no significant abnormalities in the livers of mice with moderate cecal ligation and perforation (CLP); however, ammonia levels were elevated in the hippocampal tissue and serum. The ELISA study suggest that fecal microbiota transplantation in CLP mice can reduce ammonia levels. Reduction in ammonia levels improved cognitive dysfunction and neurological impairment in CLP mice through behavioral, neuroimaging, and molecular biology studies. Further studies have shown that ammonia enters the brain to regulate the expression of aquaporins-4 (AQP4) in astrocytes, which may be the mechanism underlying brain dysfunction in CLP mice. The results of the in vitro experiments showed that ammonia up-regulated AQP4 expression in astrocytes, resulting in astrocyte damage. The results of this study suggest that ammonia up-regulates astrocyte AQP4 expression through the gut-brain axis, which may be a potential mechanism for the occurrence of SAE.


Sujet(s)
Aquaporine-4 , Astrocytes , Axe cerveau-intestin , Hyperammoniémie , Encéphalopathie associée au sepsis , Animaux , Souris , Aquaporine-4/métabolisme , Aquaporine-4/génétique , Aquaporine-4/biosynthèse , Astrocytes/métabolisme , Hyperammoniémie/métabolisme , Encéphalopathie associée au sepsis/métabolisme , Mâle , Axe cerveau-intestin/physiologie , Souris de lignée C57BL , Ammoniac/métabolisme , Ammoniac/sang , Encéphale/métabolisme , Transplantation de microbiote fécal
17.
J Hazard Mater ; 473: 134626, 2024 Jul 15.
Article de Anglais | MEDLINE | ID: mdl-38759403

RÉSUMÉ

This study innovated constructed an activated carbon-loaded nano-zero-valent iron (nZVI-C) enhanced membrane aerated biofilm reactor (MABR) coupled partial nitritation/anammox (PN/A) system for optimizing nitrogen and antibiotics removal. Results showed that nitrogen and antibiotic removal efficiencies of 88.45 ± 0.14% and 89.90 ± 3.07% were obtained by nZVI-C, respectively. nZVI-C hastened Nitrosomonas enrichment (relative abundance raised from 2.85% to 12.28%) by increasing tryptophan content in EPS. Furthermore, nZVI-C proliferated amo gene by 3.92 times and directly generated electrons, stimulating Ammonia monooxygenase (AMO) co-metabolism activity. Concurrently, via antibiotic resistance genes (ARGs) horizontal transfer, Nitrosomonas synergized with Arenimonas and Comamonadaceae for efficient antibiotic removal. Moreover, nZVI-C mitigated antibiotics inhibition of electron transfer by proliferating genes for PN and anammox electron production (hao, hdh) and utilization (amo, hzs, nir). That facilitated electron transfer and synergistic substrate conversion between ammonia oxidizing bacteria (AOB) and anaerobic ammonia oxidizing bacteria (AnAOB). Finally, the high nitrogen removal efficiency of the MABR-PN/A system was achieved.


Sujet(s)
Antibactériens , Biofilms , Bioréacteurs , Fer , Azote , Azote/métabolisme , Fer/métabolisme , Fer/composition chimique , Polluants chimiques de l'eau/métabolisme , Membrane artificielle , Ammoniac/métabolisme , Oxydoréduction , Nanoparticules métalliques/composition chimique , Charbon de bois/composition chimique , Élimination des déchets liquides/méthodes , Oxidoreductases
18.
Bioresour Technol ; 403: 130870, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38777234

RÉSUMÉ

Research on the stability evaluation of biotrickling filters (BTFs) under harsh conditions and the bacterial adaptation process still needs to be improved. Herein, BTFs with polypropylene plastic (PP) and ceramic raschig rings (CRR) were investigated for a better understanding of the biodegradation of ammonia (NH3), hydrogen sulfide (H2S), and dimethyl sulfide (DMS). The results showed an excellent performance in removal efficiency (RE) for NH3 (91.6 %-99.9 %), H2S (RE: 55.3 %-99.5 %), and DMS (RE: 10.6 %-99.9 %). It was found that a more apparent positive correlation between N2O emission and pressure drop in CRR BTF (R2 = 0.92) than in PP BTF (R2 = 0.79) (P < 0.01). Low temperature promotes an increase in the abundance ofComamonasandBacillus. The polysaccharides in PP and CRR reactors decreased by 78.6 % and 68.1 % when temperature reduced from 25℃ to 8℃. This work provides a novel insight into understanding bacterial survival under harsh BTF environments.


Sujet(s)
Ammoniac , Dépollution biologique de l'environnement , Filtration , Odorisants , Ammoniac/métabolisme , Filtration/méthodes , Bioréacteurs , Sulfure d'hydrogène/métabolisme , Sulfures/composition chimique , Sulfures/métabolisme , Soufre/métabolisme , Céramiques , Température
19.
Bioresour Technol ; 403: 130892, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38795922

RÉSUMÉ

Chitosan (CTS) serves as an excellent natural flocculant in wastewater purification and sludge conditioning, but its potential impact on anaerobic fermentation of waste-activated sludge is unclear. The current study investigated the role of CTS in short-chain fatty acids (SCFAs) generation via sludge alkaline anaerobic fermentation. The results showed a drastic reduction in SCFA production with CTS, showing a maximum inhibition of 33 % at 6 mg/g of total suspended solids. CTS hindered sludge solubilization through flocculation, and acted as a humus precursor, promoting humus formation, and consequently reduced the amount of available substrates. Further, CTS promoted free ammonia production, posing a challenge to enzymes and cell viability. Additionally, CTS increased the population of Rikenellaceae sp. and weakened the dominance of hydrolyzing and acidifying bacteria. This study deepens the understanding of the potential impact of CTS on anaerobic fermentation and provides a theoretical basis for reducing the risk of polymeric flocculants.


Sujet(s)
Chitosane , Acides gras volatils , Fermentation , Floculation , Eaux d'égout , Chitosane/composition chimique , Chitosane/pharmacologie , Acides gras volatils/métabolisme , Anaérobiose , Ammoniac/métabolisme
20.
Chem Biol Interact ; 396: 111029, 2024 Jun 01.
Article de Anglais | MEDLINE | ID: mdl-38703806

RÉSUMÉ

Arsenic exposure is connected with lung toxicity and is related to lung fibrotic changes. Idiopathic pulmonary fibrosis (IPF) is characterized by extracellular matrix (ECM) deposition. Various genetic mechanisms and environmental factors induce or exacerbate pulmonary fibrosis. Collagen synthesis induced by sodium arsenite (NaAsO2) is closely associated with IPF. Fibroblasts tend to fine-tune their metabolic networks to support their synthetic requirements in response to environmental stimuli. Alterations in metabolism have an influential role in the pathogenesis of IPF. However, it is unclear how arsenic affects the metabolism in IPF. The urea cycle (UC) is needed for collagen formation, which provides adequate levels of proline (Pro) for biosynthesis of collagen. Carbamoyl phosphate synthetase 1 (CPS1) converts the ammonia to carbamoyl phosphate, which controls the first reaction of the UC. We show that, in arsenite-exposed mice, high amounts of ammonia in the lung microenvironment promotes the expression levels of CPS1 and the Pro metabolism. Reduction of ammonia and CPS1 ablation inhibit collagen synthesis and ameliorate IPF phenotypes induced by arsenite. This work takes advantage of multi-omics data to enhance understanding of the underlying pathogenic mechanisms, the key molecules and the complicated cellular responses to this pollutant, which provide a target for the prevention of pulmonary fibrosis caused by arsenic.


Sujet(s)
Ammoniac , Arsénites , Carbamoyl-phosphate synthase (ammonia) , Collagène , Souris de lignée C57BL , Fibrose pulmonaire , Urée , Animaux , Arsénites/toxicité , Ammoniac/métabolisme , Collagène/métabolisme , Souris , Fibrose pulmonaire/induit chimiquement , Fibrose pulmonaire/métabolisme , Fibrose pulmonaire/anatomopathologie , Carbamoyl-phosphate synthase (ammonia)/métabolisme , Urée/métabolisme , Régulation positive/effets des médicaments et des substances chimiques , Poumon/métabolisme , Poumon/anatomopathologie , Poumon/effets des médicaments et des substances chimiques , Mâle , Fibrose pulmonaire idiopathique/métabolisme , Fibrose pulmonaire idiopathique/induit chimiquement , Fibrose pulmonaire idiopathique/anatomopathologie , Composés du sodium
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