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1.
Anal Chim Acta ; 1328: 343176, 2024 Nov 01.
Article de Anglais | MEDLINE | ID: mdl-39266202

RÉSUMÉ

BACKGROUND: Charge heterogeneity is a critical quality attribute for therapeutic biologics including antibody-drug conjugates (ADCs). Developing an ion exchange chromatography (IEX) or an imaged capillary isoelectric focusing (icIEF) method for ADCs with high drug-to-antibody ratio (DAR) is challenging because of the increased hydrophobicity from the payload-linker, DAR heterogeneity, and payload-linker instability. A sub-optimal method can be poorly stability-indicating due to the inability to discern contributions from charge and size variants conjugated with different number of drugs/payloads. Systematic strategy and guidance on charge variant method development is highly desired for high DAR ADCs with various complex structures. RESULTS: This work encompasses the development and optimization of icIEF methods for high DAR ADCs of various DAR values (4-8) and payload linker chemistry. Method optimization focuses on improving resolution and stability indicating capabilities and differentiating contributions from the protein and payload-linker. Types, proportion, and combination of solubilizers and carrier ampholytes, as well as focusing parameters were interrogated. Our findings show that the structural units of the linker, the DAR, and the payload chemistry prescribe the selection of buffer, solubilizer, and ampholyte. We demonstrate that a stronger denaturant or solubilizer is needed for high DAR ADCs with polyethylene glycol (PEG)-containing linker structure compared to peptide linker. For unstable payload-linker, buffer system enhances sample stability which is vital to method robustness. In addition, a longer isoelectric focusing time is necessary for an ADC than its corresponding antibody to reach optimal focusing. SIGNIFICANCE: To the best of our knowledge, this is the first comprehensive study on icIEF method development for charge variant determination of high DAR ADCs with unique physicochemical properties.


Sujet(s)
Immunoconjugués , Focalisation isoélectrique , Focalisation isoélectrique/méthodes , Immunoconjugués/composition chimique , Immunoconjugués/analyse , Électrophorèse capillaire/méthodes , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Focalisation isoélectrique capillaire
2.
J Am Soc Mass Spectrom ; 35(9): 2197-2208, 2024 Sep 04.
Article de Anglais | MEDLINE | ID: mdl-39105725

RÉSUMÉ

Established in recent years as an important approach to unraveling the heterogeneity of intact monoclonal antibodies, native mass spectrometry has been rarely utilized for sequencing these complex biomolecules via tandem mass spectrometry. Typically, top-down mass spectrometry has been performed starting from highly charged precursor ions obtained via electrospray ionization under denaturing conditions (i.e., in the presence of organic solvents and acidic pH). Here we systematically benchmark four distinct ion dissociation methods─namely, higher-energy collisional dissociation, electron transfer dissociation, electron transfer dissociation/higher-energy collisional dissociation, and 213 nm ultraviolet photodissociation─in their capability to characterize a therapeutic monoclonal antibody, trastuzumab, starting from denatured and native-like precursor ions. Interestingly, native top-down mass spectrometry results in higher sequence coverage than the experiments carried out under denaturing conditions, with the exception of ultraviolet photodissociation. Globally, electron transfer dissociation followed by collision-based activation of product ions generates the largest number of backbone cleavages in disulfide protected regions, including the complementarity determining regions, regardless of electrospray ionization conditions. Overall, these findings suggest that native mass spectrometry can certainly be used for the gas-phase sequencing of whole monoclonal antibodies, although the dissociation of denatured precursor ions still returns a few backbone cleavages not identified in native experiments. Finally, a comparison of the fragmentation maps obtained under denaturing and native conditions strongly points toward disulfide bonds as the primary reason behind the largely overlapping dissociation patterns.


Sujet(s)
Anticorps monoclonaux , Dénaturation des protéines , Trastuzumab , Trastuzumab/composition chimique , Trastuzumab/analyse , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Spectrométrie de masse ESI/méthodes , Spectrométrie de masse en tandem/méthodes , Séquence d'acides aminés
3.
Sci Rep ; 14(1): 20239, 2024 08 30.
Article de Anglais | MEDLINE | ID: mdl-39215123

RÉSUMÉ

Methods for the reliable and effective detection and identification of impurities are crucial to ensure the quality and safety of biopharmaceutical products. Technical limitations constrain the accurate identification of individual impurity peaks by size-based electrophoresis separations followed by mass spectrometry. This study presents a size-based electrophoretic method for detecting and identifying impurity peaks in antibody production. A hydrogen sulfide-accelerated degradation method was employed to generate known degradation products observed in bioreactors that forms the basis for size calibration. LabChip GXII channel electrophoresis enabled the rapid (< 1 min) detection of impurity peaks based on size, while capillary zone electrophoresis-mass spectrometry (CZE-MS) facilitated their accurate identification. We combine these techniques to examine impurities resulting from cell culture harvest conditions and forced degradation to assess antibody stability. To mimic cell culture harvest conditions and the impact of forced degradation, we subjected samples to cathepsin at different pH buffers or exposed them to high pH and temperature. Our method demonstrated the feasibility and broad applicability of using a CZE-MS generated spectral library to unambiguously assign peaks in high throughput size-based electrophoresis (i.e., LabChip GXII) with identifications or likely mass of the antibody impurity. Overall, this strategy combines the utility of CZE-MS as a high-resolution separation and detection method for impurities with size-based electrophoresis methods that are typically used to detect (not identify) impurities during the discovery and development of antibody therapeutics.


Sujet(s)
Contamination de médicament , Électrophorèse capillaire , Spectrométrie de masse , Électrophorèse capillaire/méthodes , Spectrométrie de masse/méthodes , Contamination de médicament/prévention et contrôle , Animaux , Cellules CHO , Cricetulus , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Concentration en ions d'hydrogène , Cathepsines/analyse , Bioréacteurs
4.
J Am Soc Mass Spectrom ; 35(8): 1669-1679, 2024 Aug 07.
Article de Anglais | MEDLINE | ID: mdl-38970800

RÉSUMÉ

The multiattribute method (MAM) has emerged as a powerful tool for simultaneously screening multiple product quality attributes of therapeutic antibodies. One such potential critical quality attribute (CQA) is glycation, a common modification that can impact the heterogeneity, functional activity, and immunogenicity of therapeutic antibodies. However, current methods for monitoring glycation levels in MAM are rare and not sufficiently rapid and accurate. In this study, an improved mass spectrometry (MS)-based MAM was developed to simultaneously monitor glycation and other quality attributes including afucosylation. The method was evaluated using two therapeutic antibodies with different glycosylation site numbers. Treatment with IdeS, Endo F2, and dithiothreitol generated three distinct subunits, and the glycation results obtained were similar to those treated with PNGase F, which is routinely used to release glycans; the sample processing time was greatly reduced while providing additional quality attribute information. The MS-based MAM was also employed to assess the glycation progression following forced glycation in various buffer solutions. A significant increase in oxidation was observed when forced glycation was conducted in an ammonium bicarbonate buffer solution, and a total of 23 potential glycation sites and 4 significantly oxidized sites were identified. Notably, we found that ammonium bicarbonate was found to specifically stimulate oxidation, while glycation had a synergistic effect on oxidation. These findings establish this study as a novel methodology for achieving a technologically advanced platform and concept that enhances the efficacy of product development and quality control, characterized by its broad-spectrum, rapid, and accurate nature.


Sujet(s)
Spectrométrie de masse , Glycosylation , Spectrométrie de masse/méthodes , Oxydoréduction , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Anticorps monoclonaux/métabolisme , Spectrométrie de masse en tandem/méthodes
5.
Anal Chem ; 96(31): 12827-12837, 2024 08 06.
Article de Anglais | MEDLINE | ID: mdl-39072373

RÉSUMÉ

Capillary isoelectric focusing (CIEF) coupled with electrospray ionization mass spectrometry (ESI-MS) is regarded as an outstanding approach for protein and proteoform analysis, combining a high-resolution separation technique and an enhanced detection technique. The few so-far developed CIEF-ESI-MS approaches exhibit limitations regarding sensitivity and separation performance. Here, we report a new generic methodology for CIEF-ESI-MS based on chemical mobilization, leading to highly efficient separation. This new integrated methodology relies on exchanging catholyte, initially introduced in the nanoCEasy interface in the focusing step, with sheath liquid (SL) in order to chemically mobilize the analytes into the ESI-MS system. The CIEF-MS method is evaluated by separation of a peptide set, model proteins, and monoclonal antibody charge variants. The effect of various parameters including master mixture composition, field strength, catholyte, SL composition, focusing time, and capillary conditions is optimized and discussed. Excellent separation performance can be achieved with a pI resolution down to 0.1 pH unit. The mobilization reproducibility is demonstrated with "migration time" RSDs below 10%. Additionally, the chemical mobilization is compared with the pressure assistance-chemical mobilization method, demonstrating that even a small pressure causes a strong decrease in separation performance, which clearly indicates the benefit of the chemical mobilization-based method. The applicability and separation power of the developed method are further exhibited by separation of Fc-conjugated insulins (mass = 62 kDa) differing in only one amino acid.


Sujet(s)
Focalisation isoélectrique capillaire , Protéines , Spectrométrie de masse ESI , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Focalisation isoélectrique capillaire/méthodes , Électrophorèse capillaire/méthodes , Nanotechnologie , Protéines/analyse , Protéines/composition chimique , Spectrométrie de masse ESI/méthodes
6.
Anal Methods ; 16(31): 5450-5458, 2024 Aug 08.
Article de Anglais | MEDLINE | ID: mdl-39042476

RÉSUMÉ

Imaged capillary isoelectric focusing (icIEF) is a preferred analytical method for determining isoelectric points (pIs) and charge heterogeneity profiles in biotherapeutic proteins. In this study, we optimized the icIEF method for an in-house IgG1κ monoclonal antibody (mAb-1) and assessed its reproducibility, robustness, and autosampler stability. The optimized method was used to evaluate batch-to-batch consistency in pIs for multiple lots of mAb-1 and determine the relative percentages of charge variants. We also tested the method's performance using multiple lots of another IgG1 mAb, commercially available as Herceptin (trastuzumab). Additionally, we designed and assessed native and denaturing platform icIEF methods for 11 other marketed mAbs, with pIs ranging from 6.0 (eculizumab) to 9.22 (tocilizumab).


Sujet(s)
Anticorps monoclonaux , Focalisation isoélectrique capillaire , Humains , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Focalisation isoélectrique capillaire/méthodes , Immunoglobuline G/composition chimique , Immunoglobuline G/analyse , Point isoélectrique , Reproductibilité des résultats , Trastuzumab/composition chimique , Trastuzumab/analyse
7.
J Pharm Biomed Anal ; 249: 116386, 2024 Oct 15.
Article de Anglais | MEDLINE | ID: mdl-39083921

RÉSUMÉ

Capillary electrophoresis-sodium dodecyl sulfate (CE-SDS) is a common analytical procedure used to quantitate critical quality attributes relating to the purity and glycosylation of monoclonal antibodies (mAbs). In this study, the application of an Analytical Quality by Design framework incorporating Design of Experiments was used to develop and validate both non-reduced (CE-NR) and reduced (CE-R) versions of this analytical procedure. Formal risk assessments were used to identify critical method attributes for optimization based on their potential impacts to performance criteria outlined in an analytical target profile. The resulting response surfaces connecting these critical factors to method performance were then utilized to generate a harmonized procedure to reduce execution risk across CE-R and CE-NR applications. Validation of these procedures according to regulatory guidelines support that they meet their required performance criteria, and a multivariate assessment of procedure robustness indicates that method parameters are in a sufficient state of control to ensure appropriate quantitation of mAb quality. Overall, this study demonstrates the utility of adopting an Analytical Quality by Design framework to leverage multidimensional knowledge from multiple critical method parameters to ensure an analytical procedure is fit-for-purpose.


Sujet(s)
Anticorps monoclonaux , Électrophorèse capillaire , Contrôle de qualité , Dodécyl-sulfate de sodium , Électrophorèse capillaire/méthodes , Électrophorèse capillaire/normes , Anticorps monoclonaux/analyse , Anticorps monoclonaux/composition chimique , Dodécyl-sulfate de sodium/composition chimique , Glycosylation , Reproductibilité des résultats , Plan de recherche
8.
Food Chem ; 459: 140434, 2024 Nov 30.
Article de Anglais | MEDLINE | ID: mdl-39003854

RÉSUMÉ

Tricyclazole is commonly used to prevent rice blast to meet the carbohydrate intake needs of half of the global population, and a large number of toxicological reports indicate that monitoring of tricyclazole is necessary. Here, we analyzed the structure of tricyclazole and designed different hapten derivatization strategies to prepare a high-performance monoclonal antibody (half inhibition concentration of 1.61 ng/mL), and then a lateral flow immunochromatographic sensor based on gold nanoparticles for the detection of tricyclazole in rice, with a limit of detection of 6.74 µg/kg and 13.58 µg/kg in polished and brown rice, respectively. The recoveries in rice were in the range of 84.6-107.4%, no complex pretreatment was required for comparison with LC-MS/MS, and the comparative analysis demonstrated that our method had good accuracy and precision. Therefore, the developed lateral flow immunochromatographic analysis was a reliable and rapid means for the on-site analysis of tricyclazole in rice.


Sujet(s)
Chromatographie d'affinité , Contamination des aliments , Oryza , Oryza/composition chimique , Contamination des aliments/analyse , Chromatographie d'affinité/instrumentation , Chromatographie d'affinité/méthodes , Thiazoles/analyse , Thiazoles/composition chimique , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Limite de détection , Fongicides industriels/analyse , Dosage immunologique/méthodes , Dosage immunologique/instrumentation , Résidus de pesticides/analyse , Or/composition chimique
9.
Food Chem ; 459: 140417, 2024 Nov 30.
Article de Anglais | MEDLINE | ID: mdl-39003856

RÉSUMÉ

Bupirimate (BPM) is a high-efficiency and low-toxicity fungicide used to combat powdery mildew in crops. To mitigate potential health risks to consumers resulting from improper BPM usage, we prepared a monoclonal antibody against BPM based on novel hapten synthesis, which has high sensitivity and strong specificity, and then successfully designed a colloidal gold-based immunochromatographic (ICG) strip. The newly designed ICG strip was then employed for detecting BPM residues in peach, orange, and carrot. The results show that for the peach, orange, and carrot samples, the calculated detection limits of the ICG strip are 9.36, 0.79, and 0.57 ng/g, respectively, and that it is resistant to the matrix effect and meets the maximum residue limit requirements of European Commission for BPM. Therefore, this developed ICG strip is expected to enable swift detection of BPM residues on the spot.


Sujet(s)
Chromatographie d'affinité , Citrus sinensis , Daucus carota , Contamination des aliments , Résidus de pesticides , Prunus persica , Contamination des aliments/analyse , Daucus carota/composition chimique , Prunus persica/composition chimique , Chromatographie d'affinité/méthodes , Chromatographie d'affinité/instrumentation , Citrus sinensis/composition chimique , Résidus de pesticides/analyse , Fongicides industriels/analyse , Anticorps monoclonaux/analyse , Limite de détection
10.
J Pharm Biomed Anal ; 248: 116301, 2024 Sep 15.
Article de Anglais | MEDLINE | ID: mdl-38901155

RÉSUMÉ

Early-stage cell line screening is a vital step in developing biosimilars of therapeutic monoclonal antibodies (mAbs). While the quality of the manufactured antibodies is commonly assessed by charge-based separation methods employing UV absorbance detection, these methods lack the ability to identify resolved mAb variants. We evaluated the performance of microfluidic capillary electrophoresis coupled to mass spectrometry (MCE-MS) as a rapid tool for profiling mAb biosimilar candidates from clonal cell lines. A representative originator sample was used to develop the MCE-MS method. The addition of dimethylsulfoxide (DMSO) to the background electrolyte yielded up to 60-fold enhancement of the protein MS signal. The resulting electropherograms consistently provided resolution of mAb charge variants within 10 min. Deconvoluted mass spectra facilitated the identification of basic variants such as C-terminal lysine and proline amidation, while the acidic variants could be assigned to deamidated forms. The MCE-MS method also allowed the identification of 18 different glycoforms in biosimilar samples. To mimic early-stage cell line selection, samples from five clonal cell lines that all expressed the same biosimilar candidate mAb were compared to their originator mAb. Based on the similarity observed in charge variants and glycoform profiles acquired by MCE-MS, the most promising candidate could be selected. The MCE-MS method demonstrated good overall reproducibility, as confirmed by a transferability study involving two separate laboratories. This study highlights the efficacy of the MCE-MS method for rapid proteoform screening of clonal cell line samples, underscoring its potential significance as an analytical tool in biosimilar process development.


Sujet(s)
Anticorps monoclonaux , Produits pharmaceutiques biosimilaires , Électrophorèse capillaire , Spectrométrie de masse , Produits pharmaceutiques biosimilaires/analyse , Produits pharmaceutiques biosimilaires/composition chimique , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Électrophorèse capillaire/méthodes , Spectrométrie de masse/méthodes , Cricetulus , Cellules CHO , Animaux , Humains , Glycosylation
11.
Biomed Chromatogr ; 38(9): e5940, 2024 Sep.
Article de Anglais | MEDLINE | ID: mdl-38923002

RÉSUMÉ

Poly(butyl methacrylate-co-ethylene dimethacrylate) monolith was in situ prepared in a liquid chromatography capillary column with a 75 µm internal diameter. This monolith offered high permeability (5.3 ± 10-14 m2) and good peak capacity (140 for a 15 cm column length at 300 nl/min with a 20 min gradient time). This is exemplified by its separation ability in reversed mode for subunit analysis of monoclonal antibodies after IdeS digestion (middle-up analysis). The potential of this column was also illustrated for the fast analytical control of therapeutic monoclonal antibodies in standardized infusion bags prepared in advance in a pharmacy department. Linearity analysis revealed the column's capability for accurate quantification analysis of the different dose bandings (in mg) of monoclonal antibodies in <2 min. In addition, lifetime analysis data indicated that the column can be highly reproducible and has a long lifetime with stable and low back pressure. The variations observed on the peak shape and area between unstressed (intact) and stressed monoclonal antibodies indicated that our nano liquid chromatographic method was stability indicating. In addition, using a gradient elution mode, the presence of minor components in the infusion bags was visualized.


Sujet(s)
Anticorps monoclonaux , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Chromatographie en phase liquide/méthodes , Reproductibilité des résultats , Modèles linéaires , Emballage de médicament/méthodes , Nanotechnologie/méthodes , Pharmacie d'hôpital , Méthacrylates/composition chimique
12.
Anal Chem ; 96(28): 11155-11162, 2024 07 16.
Article de Anglais | MEDLINE | ID: mdl-38943616

RÉSUMÉ

Protein-based biopharmaceutical drugs, such as monoclonal antibodies, account for the majority of the best-selling drugs globally in recent years. For bioprocesses, key performance indicators are the concentration and aggregate level for the product being produced. In water NMR (wNMR), the use of the water transverse relaxation rate [R2(1H2O)] has been previously used to determine protein concentration and aggregate level; however, it cannot be used to separate between them without using an additional technique. This work shows that it is possible to "decouple" these two key characteristics by recording the water diffusion coefficient [D(1H2O)] in conjunction with R2(1H2O), even in the event of overlap in either D(1H2O) or R2(1H2O). This method is demonstrated on three different systems, following appropriate D(1H2O) or R2(1H2O) calibration data acquisition for a protein of interest. Our method highlights the potential use of benchtop NMR as an at-line process analytical technique.


Sujet(s)
Eau , Eau/composition chimique , Diffusion , Résonance magnétique nucléaire biomoléculaire/méthodes , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Protéines/analyse , Protéines/composition chimique , Agrégats de protéines , Spectroscopie par résonance magnétique/méthodes
13.
Article de Anglais | MEDLINE | ID: mdl-38823148

RÉSUMÉ

The development and optimization of Antibody-Drug Conjugates (ADCs) hinge on enhanced analytical and bioanalytical characterization, particularly in assessing critical quality attributes (CQAs). The ADC's potency is largely determined by the average number of drugs attached to the monoclonal antibody (mAb), known as the drug-to-antibody ratio (DAR). Furthermore, the drug load distribution (DLD) influences the therapeutic window of the ADC, defining the range of dosages effective in treating diseases without causing toxic effects. Among CQAs, DAR and DLD are vital; their control is essential for ensuring manufacturing consistency and product quality. Typically, hydrophobic interaction chromatography (HIC) or reversed-phase liquid chromatography (RPLC) with UV detector have been used to quantitate DAR and DLD in quality control (QC) environment. Recently, Native size-exclusion chromatography-mass spectrometry (nSEC-MS) proves the potential as a platformable quantitative method for characterizing DAR and DLD across various cysteine-linked ADCs in research or early preclinical development. In this work, we established and assessed a streamlined nSEC-MS workflow with a benchtop LC-MS platform, to quantitatively monitor DAR and DLD of different chemotype and drug load level cysteine-linked ADCs. Moreover, to deploy this workflow in QC environment, complete method validation was conducted in three independent laboratories, adhering to the International Council for Harmonization of Technical Requirements for Pharmaceuticals for Human Use (ICH) Q2(R1) guidelines. The results met the predefined analytical target profile (ATP) and performance criteria, encompassing specificity/selectivity, accuracy, precision, linearity, range, quantification/detection limit, and robustness. Finally, the method validation design offers a reference for other nSEC-MS methods that are potentially used to determine the DAR and DLD on cysteine-linker ADCs. To the best of our knowledge, this study is the first reported systematic validation of the nSEC-MS method for detecting DAR and DLD. The results indicated that the co-validated nSEC-MS workflow is suitable for DAR and DLD routine analysis in ADC quality control, release, and stability testing.


Sujet(s)
Chromatographie sur gel , Cystéine , Immunoconjugués , Spectrométrie de masse , Immunoconjugués/composition chimique , Immunoconjugués/analyse , Cystéine/composition chimique , Reproductibilité des résultats , Chromatographie sur gel/méthodes , Spectrométrie de masse/méthodes , Modèles linéaires , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Limite de détection , Humains , Flux de travaux
14.
J Chromatogr A ; 1729: 465013, 2024 Aug 16.
Article de Anglais | MEDLINE | ID: mdl-38824753

RÉSUMÉ

The application of Process Analytical Technology (PAT) principles for manufacturing of biotherapeutics proffers the prospect of ensuring consistent product quality along with increased productivity as well as substantial cost and time savings. Although this paradigm shift from a traditional, rather rigid manufacturing model to a more scientific, risk-based approach has been advocated by health authorities for almost two decades, the practical implementation of PAT in the biopharmaceutical industry is still limited by the lack of fit-for-purpose analytical methods. In this regard, most of the proposed spectroscopic techniques are sufficiently fast but exhibit deficiencies in terms of selectivity and sensitivity, while well-established offline methods, such as (ultra-)high-performance liquid chromatography, are generally considered as too slow for this task. To address these reservations, we introduce here a novel online Liquid Chromatography (LC) setup that was specifically designed to enable real-time monitoring of critical product quality attributes during time-sensitive purification operations in downstream processing. Using this online LC solution in combination with fast, purpose-built analytical methods, sampling cycle times between 1.30 and 2.35 min were achieved, without compromising on the ability to resolve and quantify the product variants of interest. The capabilities of our approach are ultimately assessed in three case studies, involving various biotherapeutic modalities, downstream processes and analytical chromatographic separation modes. Altogether, our results highlight the expansive opportunities of online LC based applications to serve as a PAT tool for biopharmaceutical manufacturing.


Sujet(s)
Produits biologiques , Produits biologiques/analyse , Produits biologiques/composition chimique , Chromatographie en phase liquide à haute performance/méthodes , Chromatographie en phase liquide/méthodes , Anticorps monoclonaux/analyse , Anticorps monoclonaux/composition chimique
15.
J Am Soc Mass Spectrom ; 35(7): 1441-1450, 2024 Jul 03.
Article de Anglais | MEDLINE | ID: mdl-38815255

RÉSUMÉ

Currently, glycopeptide quantitation is mainly based on relative quantitation due to absolute quantitation requiring isotope-labeled or standard glycopeptides which may not be commercially available or are very costly and time consuming to synthesize. To address this grand challenge, coulometric mass spectrometry (CMS), based on the combination of electrochemistry (EC) and mass spectrometry (MS), was utilized to quantify electrochemically active glycopeptides without the need of using standard materials. In this study, we studied tyrosine-containing glycopeptides, NYIVGQPSS(ß-GlcNAc)TGNL-OH and NYSVPSS(ß-GlcNAc)TGNL-OH, and successfully quantified them directly with CMS with a discrepancy of less than 5% between the CMS measured amount and the theoretical amount. Taking one step further, we applied this approach to quantify glycopeptides generated from the digestion of NIST mAb, a monoclonal antibody reference material. Through HILIC column separation, five N297 glycopeptides resulting from NIST mAb tryptic digestion were successfully separated and quantified by CMS for an absolute amount without the use of any standard materials. This study indicates the potential utility of CMS for quantitative proteomics research.


Sujet(s)
Glycopeptides , Spectrométrie de masse , Oxydoréduction , Glycopeptides/analyse , Glycopeptides/composition chimique , Spectrométrie de masse/méthodes , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Protéomique/méthodes , Protéomique/normes , Tyrosine/analyse , Tyrosine/composition chimique , Techniques électrochimiques/méthodes
16.
Anal Chem ; 96(22): 8880-8885, 2024 06 04.
Article de Anglais | MEDLINE | ID: mdl-38771719

RÉSUMÉ

The characterization of proteins and complexes in biological systems is essential to establish their critical properties and to understand their unique functions in a plethora of bioprocesses. However, it is highly difficult to analyze low levels of intact proteins in their native states (especially those exceeding 30 kDa) with liquid chromatography (LC)-mass spectrometry (MS). Herein, we describe for the first time the use of nanoflow ion-exchange chromatography directly coupled with native MS to resolve mixtures of intact proteins. Reference proteins and protein complexes with molecular weights between 10 and 150 kDa and a model cell lysate were separated using a salt-mediated pH gradient method with volatile additives. The method allowed for low detection limits (0.22 pmol of monoclonal antibodies), while proteins presented nondenatured MS (low number of charges and limited charge state distributions), and the oligomeric state of the complexes analyzed was mostly kept. Excellent chromatographic separations including the resolution of different proteoforms of large proteins (>140 kDa) and a peak capacity of 82 in a 30 min gradient were obtained. The proposed setup and workflows show great potential for analyzing diverse proteoforms in native top-down proteomics, opening unprecedented opportunities for clinical studies and other sample-limited applications.


Sujet(s)
Spectrométrie de masse , Chromatographie d'échange d'ions/méthodes , Spectrométrie de masse/méthodes , Protéines/analyse , Protéines/composition chimique , Nanotechnologie , Humains , Protéomique/méthodes , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse
17.
J Sep Sci ; 47(11): e2400092, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38819776

RÉSUMÉ

This paper presents an approach based on triple injection capillary zone electrophoresis for identification of monoclonal antibodies. The analyte to be identified is injected between two zones of a known reference. The distances between the reference zones (plug I and III) and the target zone (plug II) are adjusted by partial electrophoresis of the first and second injection plugs. The full migration time of the target analyte is calculated from the observed migration time by considering the migration times of the reference in the first and third injection plugs. The relative migration time, that is, the ratio between the full migration time of the analyte and the migration time of the reference in the third injection plug provides the basis for identification. Here, eight monoclonal antibodies, including a pair of biosimilars, were used interchangeably as both analyte and reference to investigate potential of the method. The relative migration time for a preliminary positive identification were found to vary between 0.994 and 1.006 (1.000 ± 0.006, p = 95%). Beside the relative migration time, isoform distribution, peak profiles, and early migrating peaks, originating from components in the pharmaceutical formulations, were successfully used to verify the identity of all tested monoclonal antibodies.


Sujet(s)
Anticorps monoclonaux , Électrophorèse capillaire , Anticorps monoclonaux/analyse , Anticorps monoclonaux/composition chimique
18.
J Sep Sci ; 47(11): e2400051, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38819868

RÉSUMÉ

While automated peak detection functionalities are available in commercially accessible software, achieving optimal true positive rates frequently necessitates visual inspection and manual adjustments. In the initial phase of this study, hetero-variants (glycoforms) of a monoclonal antibody were distinguished using liquid chromatography-mass spectrometry, revealing discernible peaks at the intact level. To comprehensively identify each peak (hetero-variant) in the intact-level analysis, a deep learning approach utilizing convolutional neural networks (CNNs) was employed in the subsequent phase of the study. In the current case study, utilizing conventional software for peak identification, five peaks were detected using a 0.5 threshold, whereas seven peaks were identified using the CNN model. The model exhibited strong performance with a probability area under the curve (AUC) of 0.9949, surpassing that of partial least squares discriminant analysis (PLS-DA) (probability AUC of 0.8041), and locally weighted regression (LWR) (probability AUC of 0.6885) on the data acquired during experimentation in real-time. The AUC of the receiver operating characteristic curve also illustrated the superior performance of the CNN over PLS-DA and LWR.


Sujet(s)
Apprentissage profond , Anticorps monoclonaux/analyse , Anticorps monoclonaux/composition chimique , Chromatographie en phase liquide , Spectrométrie de masse , Méthode des moindres carrés , , Analyse discriminante
19.
Talanta ; 276: 126232, 2024 Aug 15.
Article de Anglais | MEDLINE | ID: mdl-38749159

RÉSUMÉ

Robust monitoring of heterogeneity in biopharmaceutical development is crucial for producing safe and efficacious biotherapeutic products. Multiattribute monitoring (MAM) has emerged as an efficient tool for monitoring of mAb heterogeneities like deamidation, sialylation, glycosylation, and oxidation. Conventional biopharma analysis during mAb development relies on use of one-dimensional methods for monitoring titer and charge-based heterogeneity using non-volatile solvents without direct coupling with mass spectrometry (MS). This approach requires analysis of mAb harvest by ProA for titer estimation followed by separate cation exchange chromatography (CEX) analysis of the purified sample for estimating charge-based heterogeneity. This can take up to 60-90 min due to the required fraction collection and buffer exchange steps. In this work, a native two-dimensional liquid chromatography (2DLC) mass spectrometry method has been developed with Protein A chromatography in the first dimension for titer estimation and cation exchange chromatography (CEX) in the second dimension for charge variant analysis. The method uses volatile salts for both dimensions and enables easy coupling to MS. The proposed 2DLC method exhibits a charge variant profile that is similar to that observed via the traditional methods and takes only 15 min for mass identification of each variant. A total of six charge variants were separated by the CEX analysis after titer estimation, including linearity assessment from 5 µg to 160 µg of injected mAb sample. The proposed method successfully estimated charge variants for the mAb innovator and 4 of its biosimilars, showcasing its applicability for biosimilarity exercises. Hence, the 2D ProA CEX MS method allows direct titer and charge variant estimation of mAbs in a single workflow.


Sujet(s)
Anticorps monoclonaux , Cricetulus , Spectrométrie de masse , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Spectrométrie de masse/méthodes , Animaux , Chromatographie d'échange d'ions/méthodes , Cellules CHO , Techniques de culture cellulaire
20.
J Pharm Biomed Anal ; 246: 116220, 2024 Aug 15.
Article de Anglais | MEDLINE | ID: mdl-38795426

RÉSUMÉ

This work presents the application of AQbD principles to the development of a size exclusion chromatography (SEC) HPLC procedure for the determination of monoclonal antibody (mAb) product purity using state-of-the-art column technology available via the Waters™ XBridge Premier Protein SEC column. Analytical Quality by Design (AQbD) emphasizes a systematic, risk-based lifecycle approach to analytical procedure development based on sound statistical methodologies. It has recently become increasingly recommended by regulatory agencies as a response to the need for greater efficiency, improved reliability, and increased robustness among modern analytical procedures in the pharmaceutical industry. Use of an Analytical Target Profile (ATP) and formal risk assessments informed the application of Design of Experiments (DoE) to optimize this analytical procedure, as well as assess its robustness and ruggedness. Importantly, our ruggedness results demonstrated the transferability of this procedure between two laboratories within the Catalent Biologics Global Network. Application of this analytical procedure as a platform approach for evaluating mAb purity is expected to support expedited, first-in-human timelines of mAb molecules by enabling great quantitative performance with simple mobile phase buffer compositions. Taken together, this case study demonstrates the utility of adopting AQbD principles in analytical procedure development.


Sujet(s)
Anticorps monoclonaux , Chromatographie sur gel , Anticorps monoclonaux/composition chimique , Anticorps monoclonaux/analyse , Chromatographie en phase liquide à haute performance/méthodes , Chromatographie sur gel/méthodes , Reproductibilité des résultats , Contrôle de qualité , Humains , Plan de recherche , Contamination de médicament/prévention et contrôle
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