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1.
Chem Commun (Camb) ; 60(82): 11734-11737, 2024 Oct 10.
Article de Anglais | MEDLINE | ID: mdl-39318342

RÉSUMÉ

The human Golgi α-mannosidase, hGMII, removes two mannose residues from GlcNAc-Man5GlcNAc2 to produce GlcNAcMan3GlcNAc2, the precursor of all complex N-glycans including tumour-associated ones. The natural product GMII inhibitor, swainsonine, blocks processing of cancer-associated N-glycans, but also inhibits the four other human α-mannosidases, rendering it unsuitable for clinical use. Our previous structure-guided screening of iminosugar pyrrolidine and piperidine fragments identified two micromolar hGMII inhibitors occupying the enzyme active pockets in adjacent, partially overlapping sites. Here we demonstrate that fusing these fragments yields swainsonine-configured indolizidines featuring a C3-substituent that act as selective hGMII inhibitors. Our structure-guided GMII-selective inhibitor design complements a recent combinatorial approach that yielded similarly configured and substituted indolizidine GMII inhibitors, and holds promise for the potential future development of anti-cancer agents targeting Golgi N-glycan processing.


Sujet(s)
Antienzymes , Tridolgosir , Humains , Tridolgosir/pharmacologie , Tridolgosir/composition chimique , Antienzymes/composition chimique , Antienzymes/pharmacologie , Antienzymes/synthèse chimique , alpha-Mannosidase/antagonistes et inhibiteurs , alpha-Mannosidase/métabolisme , Appareil de Golgi/métabolisme , Appareil de Golgi/enzymologie , Conception de médicament , Relation structure-activité , Structure moléculaire , Mannosidases/antagonistes et inhibiteurs , Mannosidases/métabolisme , Mannosidases/composition chimique
2.
J Cell Biol ; 223(10)2024 Oct 07.
Article de Anglais | MEDLINE | ID: mdl-39101946

RÉSUMÉ

Small GTPases are essential in various cellular signaling pathways, and detecting their activation within living cells is crucial for understanding cellular processes. The current methods for detecting GTPase activation using fluorescent proteins rely on the interaction between the GTPase and its effector. Consequently, these methods are not applicable to factors, such as Sar1, where the effector also functions as a GTPase-activating protein. Here, we present a novel method, the Small GTPase ActIvitY ANalyzing (SAIYAN) system, for detecting the activation of endogenous small GTPases via fluorescent signals utilizing a split mNeonGreen system. We demonstrated Sar1 activation at the endoplasmic reticulum (ER) exit site and successfully detected its activation state in various cellular conditions. Utilizing the SAIYAN system in collagen-secreting cells, we discovered activated Sar1 localized both at the ER exit sites and ER-Golgi intermediate compartment (ERGIC) regions. Additionally, impaired collagen secretion confined the activated Sar1 at the ER exit sites, implying the importance of Sar1 activation through the ERGIC in collagen secretion.


Sujet(s)
Réticulum endoplasmique , Appareil de Golgi , Protéines G monomériques , Protéines G monomériques/métabolisme , Réticulum endoplasmique/métabolisme , Humains , Appareil de Golgi/métabolisme , Appareil de Golgi/enzymologie , Animaux , Activation enzymatique , Collagène/métabolisme , Cellules HeLa
3.
Cell Struct Funct ; 49(2): 47-55, 2024 Aug 27.
Article de Anglais | MEDLINE | ID: mdl-38987202

RÉSUMÉ

The Golgi apparatus, a crucial organelle involved in protein processing, including glycosylation, exhibits complex sub-structures, i.e., cis-, medial, and trans-cisternae. This study investigated the distribution of glycosyltransferases within the Golgi apparatus of mammalian cells via 3D super-resolution imaging. Focusing on human glycosyltransferases involved in N-glycan modification, we found that even enzymes presumed to coexist in the same Golgi compartment exhibit nuanced variations in localization. By artificially making their N-terminal regions [composed of a cytoplasmic, transmembrane, and stem segment (CTS)] identical, it was possible to enhance the degree of their colocalization, suggesting the decisive role of this region in determining the sub-Golgi localization of enzymes. Ultimately, this study reveals the molecular codes within CTS regions as key determinants of glycosyltransferase localization, providing insights into precise control over the positioning of glycosyltransferases, and consequently, the interactions between glycosyltransferases and substrate glycoproteins as cargoes in the secretory pathway. This study advances our understanding of Golgi organization and opens avenues for programming the glycosylation of proteins for clinical applications.Key words: Golgi apparatus, glycosyltransferase, 3D super-resolution imaging, N-glycosylation.


Sujet(s)
Glycosyltransferase , Appareil de Golgi , Imagerie tridimensionnelle , Appareil de Golgi/métabolisme , Appareil de Golgi/enzymologie , Humains , Glycosyltransferase/métabolisme , Imagerie tridimensionnelle/méthodes , Glycosylation , Cellules HeLa
4.
Biol Pharm Bull ; 47(6): 1136-1143, 2024.
Article de Anglais | MEDLINE | ID: mdl-38866522

RÉSUMÉ

Ceramide (Cer) is synthesized de novo in the bilayer of the endoplasmic reticulum and transported to the cytosolic leaflet of the trans-Golgi apparatus for sphingomyelin (SM) synthesis. As the active site of SM synthase (SMS) is located on the luminal side of the Golgi membrane, Cer translocates to the lumen via transbilayer movement for SM synthesis. However, the mechanism of transbilayer movement is not fully understood. As the Cer-related translocases seem to localize near the SMS, the protein was identified using proximity-dependent biotin identification proteomics. Phospholipid scramblase 1 (PLSCR1), which is thought to act as a scramblase for phosphatidylserine and phosphatidylethanolamine, was identified as a protein proximal to the SMS isoforms SMS1 and SMS2. Although five isoforms of PLSCR have been reported in humans, only PLSCR1, PLSCR3, and PLSCR4 are expressed in HEK293T cells. Confocal microscopic analysis showed that PLSCR1 and PLSCR4 partially co-localized with p230, a trans-Golgi network marker, where SMS isoforms are localized. We established CRISPR/Cas9-mediated PLSCR1, PLSCR3, and PLSCR4 single-knockout cells and PLSCR1, 3, 4 triple knockout HEK293T cells. Liquid chromatography-tandem mass spectrometry revealed that the levels of species with distinct acyl chains in Cer and SM were not significantly different in single knockout cells or in the triple knockout cells compared to the wild-type cells. Our findings suggest that PLSCR1 is localized in the vicinity of SMS isoforms, however is not involved in the transbilayer movement of Cer for SM synthesis.


Sujet(s)
Protéines de transfert des phospholipides , Sphingomyéline , Transferases (other substituted phosphate groups) , Humains , Protéines de transfert des phospholipides/métabolisme , Protéines de transfert des phospholipides/génétique , Transferases (other substituted phosphate groups)/métabolisme , Transferases (other substituted phosphate groups)/génétique , Cellules HEK293 , Sphingomyéline/métabolisme , Sphingomyéline/biosynthèse , Protéines membranaires/métabolisme , Protéines membranaires/génétique , Isoenzymes/métabolisme , Isoenzymes/génétique , Appareil de Golgi/métabolisme , Appareil de Golgi/enzymologie
5.
Biotechnol J ; 19(5): e2400098, 2024 May.
Article de Anglais | MEDLINE | ID: mdl-38797728

RÉSUMÉ

Human carboxypeptidase B1 (hCPB1) is vital for recombinant insulin production, holding substantial value in the pharmaceutical industry. Current challenges include limited hCPB1 enzyme activity. In this study, recombinant hCPB1 efficient expression in Pichia pastoris was achieved. To enhance hCPB1 secretion, we conducted signal peptides screening and deleted the Vps10 sortilin domain, reducing vacuolar mis-sorting. Overexpression of Sec4p increased the fusion of secretory vesicles with the plasma membrane and improved hCPB1 secretion by 20%. Rational protein engineering generated twenty-two single-mutation mutants and identified the A178L mutation resulted in a 30% increase in hCPB1 specific activity. However, all combinational mutations that increased specific activities decreased protein expression levels. Therefore, computer-aided global protein design with PROSS was employed for the aim of improving specific activities and preserving good protein expression. Among the six designed mutants, hCPB1-P6 showed a remarkable 114% increase in the catalytic rate constant (kcat), a 137% decrease in the Michaelis constant (Km), and a 490% increase in catalytic efficiency. Most mutations occurred on the surface of hCPB1-P6, with eight sites mutated to proline. In a 5 L fermenter, hCPB1-P6 was produced by the secretion-enhanced P. pastoris chassis to 199.6 ± 20 mg L-1 with a specific activity of 96 ± 0.32 U mg-1, resulting in a total enzyme activity of 19137 ± 1131 U L-1, demonstrating significant potential for industrial applications.


Sujet(s)
Carboxypeptidase B , Membrane cellulaire , Appareil de Golgi , Ingénierie des protéines , Protéines recombinantes , Humains , Protéines recombinantes/génétique , Protéines recombinantes/métabolisme , Ingénierie des protéines/méthodes , Carboxypeptidase B/génétique , Carboxypeptidase B/métabolisme , Membrane cellulaire/métabolisme , Membrane cellulaire/génétique , Appareil de Golgi/métabolisme , Appareil de Golgi/génétique , Appareil de Golgi/enzymologie , Saccharomycetales/génétique , Saccharomycetales/enzymologie , Mutation , Pichia/génétique , Pichia/métabolisme , Signaux de triage des protéines/génétique , Transport des protéines
6.
J Biol Chem ; 300(1): 105564, 2024 Jan.
Article de Anglais | MEDLINE | ID: mdl-38103644

RÉSUMÉ

The polysialyltransferases ST8SIA2 and ST8SIA4 and their product, polysialic acid (polySia), are known to be related to cancers and mental disorders. ST8SIA2 and ST8SIA4 have conserved amino acid (AA) sequence motifs essential for the synthesis of the polySia structures on the neural cell adhesion molecule. To search for a new motif in the polysialyltransferases, we adopted the in silico Individual Meta Random Forest program that can predict disease-related AA substitutions. The Individual Meta Random Forest program predicted a new eight-amino-acids sequence motif consisting of highly pathogenic AA residues, thus designated as the pathogenic (P) motif. A series of alanine point mutation experiments in the pathogenic motif (P motif) showed that most P motif mutants lost the polysialylation activity without changing the proper enzyme expression levels or localization in the Golgi. In addition, we evaluated the enzyme stability of the P motif mutants using newly established calculations of mutation energy, demonstrating that the subtle change of the conformational energy regulates the activity. In the AlphaFold2 model, we found that the P motif was a buried ß-strand underneath the known surface motifs unique to ST8SIA2 and ST8SIA4. Taken together, the P motif is a novel buried ß-strand that regulates the full activity of polysialyltransferases from the inside of the molecule.


Sujet(s)
Mutation , Sialyltransferases , Humains , Motifs d'acides aminés/génétique , Substitution d'acide aminé , Simulation numérique , Appareil de Golgi/enzymologie , Appareil de Golgi/métabolisme , Molécules d'adhérence cellulaire neurales/composition chimique , Molécules d'adhérence cellulaire neurales/métabolisme , Mutation ponctuelle , Structure en brin bêta , Transport des protéines , Forêts aléatoires , Acides sialiques/métabolisme , Sialyltransferases/composition chimique , Sialyltransferases/génétique , Sialyltransferases/métabolisme
7.
J Biol Chem ; 299(12): 105473, 2023 Dec.
Article de Anglais | MEDLINE | ID: mdl-37979916

RÉSUMÉ

Vacuolar H+-ATPases (V-ATPases) are highly conserved multisubunit enzymes that maintain the distinct pH of eukaryotic organelles. The integral membrane a-subunit is encoded by tissue- and organelle-specific isoforms, and its cytosolic N-terminal domain (aNT) modulates organelle-specific regulation and targeting of V-ATPases. Organelle membranes have specific phosphatidylinositol phosphate (PIP) lipid enrichment linked to maintenance of organelle pH. In yeast, the aNT domains of the two a-subunit isoforms bind PIP lipids enriched in the organelle membranes where they reside; these interactions affect activity and regulatory properties of the V-ATPases containing each isoform. Humans have four a-subunit isoforms, and we hypothesize that the aNT domains of these isoforms will also bind to specific PIP lipids. The a1 and a2 isoforms of human V-ATPase a-subunits are localized to endolysosomes and Golgi, respectively. We determined that bacterially expressed Hua1NT and Hua2NT bind specifically to endolysosomal PIP lipids PI(3)P and PI(3,5)P2 and Golgi enriched PI(4)P, respectively. Despite the lack of canonical PIP-binding sites, we identified potential binding sites in the HuaNT domains by sequence comparisons and existing subunit structures and models. We found that mutations at a similar location in the distal loops of both HuaNT isoforms compromise binding to their cognate PIP lipids, suggesting that these loops encode PIP specificity of the a-subunit isoforms. These data suggest a mechanism through which PIP lipid binding could stabilize and activate V-ATPases in distinct organelles.


Sujet(s)
Phosphates phosphatidylinositol , Sous-unités de protéines , Vacuolar Proton-Translocating ATPases , Humains , Sites de fixation , Endosomes/enzymologie , Endosomes/métabolisme , Appareil de Golgi/enzymologie , Appareil de Golgi/métabolisme , Concentration en ions d'hydrogène , Lysosomes/enzymologie , Lysosomes/métabolisme , Phosphates phosphatidylinositol/métabolisme , Isoformes de protéines/composition chimique , Isoformes de protéines/métabolisme , Sous-unités de protéines/composition chimique , Sous-unités de protéines/métabolisme , Saccharomyces cerevisiae/enzymologie , Saccharomyces cerevisiae/métabolisme , Spécificité du substrat , Vacuolar Proton-Translocating ATPases/composition chimique , Vacuolar Proton-Translocating ATPases/métabolisme , Domaines protéiques
8.
J Biol Chem ; 299(10): 105192, 2023 Oct.
Article de Anglais | MEDLINE | ID: mdl-37625589

RÉSUMÉ

Point mutations in leucine-rich repeat kinase 2 (LRRK2) cause Parkinson's disease and augment LRRK2's kinase activity. However, cellular pathways that endogenously enhance LRRK2 kinase function have not been identified. While overexpressed Rab29 draws LRRK2 to Golgi membranes to increase LRRK2 kinase activity, there is little evidence that endogenous Rab29 performs this function under physiological conditions. Here, we identify Rab38 as a novel physiologic regulator of LRRK2 in melanocytes. In mouse melanocytes, which express high levels of Rab38, Rab32, and Rab29, knockdown (or CRISPR knockout) of Rab38, but not Rab32 or Rab29, decreases phosphorylation of multiple LRRK2 substrates, including Rab10 and Rab12, by both endogenous LRRK2 and exogenous Parkinson's disease-mutant LRRK2. In B16-F10 mouse melanoma cells, Rab38 drives LRRK2 membrane association and overexpressed kinase-active LRRK2 shows striking pericentriolar recruitment, which is dependent on the presence of endogenous Rab38 but not Rab32 or Rab29. Consistently, knockdown or mutation of BLOC-3, the guanine nucleotide exchange factor for Rab38 and Rab32, inhibits Rab38's regulation of LRRK2. Deletion or mutation of LRRK2's Rab38-binding site in the N-terminal armadillo domain decreases LRRK2 membrane association, pericentriolar recruitment, and ability to phosphorylate Rab10. In sum, our data identify Rab38 as a physiologic regulator of LRRK2 function and lend support to a model in which LRRK2 plays a central role in Rab GTPase coordination of vesicular trafficking.


Sujet(s)
Membranes intracellulaires , Leucine-rich repeat serine-threonine protein kinase-2 , Mélanocytes , Protéines G rab , Animaux , Souris , Appareil de Golgi/enzymologie , Appareil de Golgi/génétique , Facteurs d'échange de nucléotides guanyliques/génétique , Facteurs d'échange de nucléotides guanyliques/métabolisme , Leucine-rich repeat serine-threonine protein kinase-2/génétique , Leucine-rich repeat serine-threonine protein kinase-2/métabolisme , Mélanocytes/métabolisme , Mutation , Maladie de Parkinson/métabolisme , Phosphorylation , Protéines G rab/génétique , Protéines G rab/métabolisme , Cellules HEK293 , Humains , Expression des gènes , Domaines protéiques , Liaison aux protéines , Membranes intracellulaires/métabolisme
9.
Biochim Biophys Acta Gen Subj ; 1867(9): 130412, 2023 09.
Article de Anglais | MEDLINE | ID: mdl-37348823

RÉSUMÉ

The remarkable structural diversity of glycans that is exposed at the cell surface and generated along the secretory pathway is tightly regulated by several factors. The recent identification of human glycosylation diseases related to metal transporter defects opened a completely new field of investigation, referred to herein as "metalloglycobiology", on how metal changes can affect the glycosylation and hence the glycan structures that are produced. Although this field is in its infancy, this review aims to go through the different glycosylation steps/pathways that are metal dependent and that could be impacted by metal homeostasis dysregulations.


Sujet(s)
Glycomique , Glycosylation , Métaux , Polyosides , Humains , Transporteurs de cations/métabolisme , Troubles congénitaux de la glycosylation/métabolisme , Réticulum endoplasmique/enzymologie , Réticulum endoplasmique/métabolisme , Glycomique/tendances , Appareil de Golgi/enzymologie , Appareil de Golgi/métabolisme , Homéostasie , Magnésium/composition chimique , Magnésium/métabolisme , Métaux/composition chimique , Métaux/métabolisme , Oxydoréduction , Polyosides/composition chimique , Polyosides/métabolisme , Zinc/composition chimique , Zinc/métabolisme
10.
J Mol Biol ; 435(15): 168171, 2023 08 01.
Article de Anglais | MEDLINE | ID: mdl-37285900

RÉSUMÉ

Carboxypeptidase E (CPE), an essential enzyme in the biosynthetic production line of most peptide hormones and neuropeptides, is predominantly expressed in endocrine tissues and in the nervous system. CPE is active in acidic environments where it cleaves the C'-terminal basic residues of peptide precursors to generate their bioactive form. Consequently, this highly conserved enzyme regulates numerous fundamental biological processes. Here, we combined live-cell microscopy and molecular analysis to examine the intracellular distribution and secretion dynamics of fluorescently tagged CPE. We show that, in non-endocrine cells, tagged-CPE is a soluble luminal protein that is efficiently exported from the ER via the Golgi apparatus to lysosomes. The C'-terminal conserved amphipathic helix serves as a lysosomal and secretory granule targeting and a secretion motif. Following secretion, CPE may be reinternalized into the lysosomes of neighboring cells.


Sujet(s)
Carboxypeptidase H , Lysosomes , Carboxypeptidase H/génétique , Carboxypeptidase H/métabolisme , Appareil de Golgi/enzymologie , Lysosomes/enzymologie , Neuropeptides/métabolisme
11.
J Biol Chem ; 298(9): 102281, 2022 09.
Article de Anglais | MEDLINE | ID: mdl-35863437

RÉSUMÉ

Rab22 and Rab31 belong to the Rab5 subfamily of GTPases that regulates endocytic traffic and endosomal sorting. Rab22 and Rab31 (a.k.a. Rab22b) are closely related and share 87% amino acid sequence similarity, but they show distinct intracellular localization and function in the cell. Rab22 is localized to early endosomes and regulates early endosomal recycling, while Rab31 is mostly localized to the Golgi complex with only a small fraction in the endosomes at steady state. The specific determinants that affect this differential localization, however, are unclear. In this study, we identify a novel membrane targeting domain (MTD) consisting of the C-terminal hypervariable domain (HVD), interswitch loop (ISL), and N-terminal domain as a major determinant of endosomal localization for Rab22 and Rab31, as well as Rab5. Rab22 and Rab31 share the same N-terminal domain, but we find Rab22 chimeras with Rab31 HVD exhibit phenotypic Rab31 localization to the Golgi complex, while Rab31 chimeras with the Rab22 HVD localize to early endosomes, similar to wildtype Rab22. We also find that the Rab22 HVD favors interaction with the early endosomal effector protein Rabenosyn-5, which may stabilize the Rab localization to the endosomes. The importance of effector interaction in endosomal localization is further demonstrated by the disruption of Rab22 endosomal localization in Rabenosyn-5 knockout cells and by the shift of Rab31 to the endosomes in Rabenosyn-5-overexpressing cells. Taken together, we have identified a novel MTD that mediates localization of Rab5 subfamily members to early endosomes via interaction with an effector such as Rabenosyn-5.


Sujet(s)
Endosomes , Appareil de Golgi , Protéines G rab , Animaux , Cricetinae , Endosomes/enzymologie , Appareil de Golgi/enzymologie , Cellules HEK293 , Humains , Cellules PC12 , Domaines protéiques , Transport des protéines , Rats , Protéines de fusion recombinantes/composition chimique , Protéines de fusion recombinantes/génétique , Vésicules de transport/métabolisme , Protéines G rab/composition chimique , Protéines G rab/génétique , Protéines G rab/métabolisme , Protéines G rab5/métabolisme
12.
ACS Chem Biol ; 17(1): 240-251, 2022 01 21.
Article de Anglais | MEDLINE | ID: mdl-35000377

RÉSUMÉ

Many cellular processes are dependent on correct pH levels, and this is especially important for the secretory pathway. Defects in pH homeostasis in distinct organelles cause a wide range of diseases, including disorders of glycosylation and lysosomal storage diseases. Ratiometric imaging of the pH-sensitive mutant of green fluorescent protein, pHLuorin, has allowed for targeted pH measurements in various organelles, but the required sequential image acquisition is intrinsically slow and therefore the temporal resolution is unsuitable to follow the rapid transit of cargo between organelles. Therefore, we applied fluorescence lifetime imaging microscopy (FLIM) to measure intraorganellar pH with just a single excitation wavelength. We first validated this method by confirming the pH in multiple compartments along the secretory pathway and compared the pH values obtained by the FLIM-based measurements with those obtained by conventional ratiometric imaging. Then, we analyzed the dynamic pH changes within cells treated with Bafilomycin A1, to block the vesicular ATPase, and Brefeldin A, to block endoplasmic reticulum (ER)-Golgi trafficking. Finally, we followed the pH changes of newly synthesized molecules of the inflammatory cytokine tumor necrosis factor-α while they were in transit from the ER via the Golgi to the plasma membrane. The toolbox we present here can be applied to measure intracellular pH with high spatial and temporal resolution and can be used to assess organellar pH in disease models.


Sujet(s)
Concentration en ions d'hydrogène , Imagerie optique/méthodes , Voie de sécrétion , Adenosine triphosphatases/antagonistes et inhibiteurs , Bréfeldine A/pharmacologie , Réticulum endoplasmique/effets des médicaments et des substances chimiques , Réticulum endoplasmique/enzymologie , Réticulum endoplasmique/métabolisme , Appareil de Golgi/effets des médicaments et des substances chimiques , Appareil de Golgi/enzymologie , Appareil de Golgi/métabolisme , Humains , Macrolides/pharmacologie , Microscopie de fluorescence/méthodes , Transport des protéines
13.
J Biol Chem ; 296: 100315, 2021.
Article de Anglais | MEDLINE | ID: mdl-33485966

RÉSUMÉ

Lipid flipping in the membrane bilayers is a widespread eukaryotic phenomenon that is catalyzed by assorted P4-ATPases. Its occurrence, mechanism, and importance in apicomplexan parasites have remained elusive, however. Here we show that Toxoplasma gondii, an obligate intracellular parasite with high clinical relevance, can salvage phosphatidylserine (PtdSer) and phosphatidylethanolamine (PtdEtn) but not phosphatidylcholine (PtdCho) probes from its milieu. Consistently, the drug analogs of PtdCho are broadly ineffective in the parasite culture. NBD-PtdSer imported to the parasite interior is decarboxylated to NBD-PtdEtn, while the latter is not methylated to yield PtdCho, which confirms the expression of PtdSer decarboxylase but a lack of PtdEtn methyltransferase activity and suggests a role of exogenous lipids in membrane biogenesis of T. gondii. Flow cytometric quantitation of NBD-probes endorsed the selectivity of phospholipid transport and revealed a dependence of the process on energy and protein. Accordingly, our further work identified five P4-ATPases (TgP4-ATPase1-5), all of which harbor the signature residues and motifs required for phospholipid flipping. Of the four proteins expressed during the lytic cycle, TgP4-ATPase1 is present in the apical plasmalemma; TgP4-ATPase3 resides in the Golgi network along with its noncatalytic partner Ligand Effector Module 3 (TgLem3), whereas TgP4-ATPase2 and TgP4-ATPase5 localize in the plasmalemma as well as endo/cytomembranes. Last but not least, auxin-induced degradation of TgP4-ATPase1-3 impaired the parasite growth in human host cells, disclosing their crucial roles during acute infection. In conclusion, we show selective translocation of PtdEtn and PtdSer at the parasite surface and provide the underlying mechanistic and physiological insights in a model eukaryotic pathogen.


Sujet(s)
Adenosine triphosphatases/génétique , Double couche lipidique/métabolisme , Toxoplasma/génétique , Toxoplasmose/génétique , Adenosine triphosphatases/composition chimique , Membrane cellulaire/génétique , Membrane cellulaire/métabolisme , Cytométrie en flux , Glycérophospholipides/métabolisme , Appareil de Golgi/composition chimique , Appareil de Golgi/enzymologie , Humains , Double couche lipidique/composition chimique , Lipides/composition chimique , Lipides/génétique , Phosphatidylcholines/génétique , Phosphatidylcholines/métabolisme , Phosphatidyléthanolamine/génétique , Phosphatidyléthanolamine/métabolisme , Phosphatidylsérine/métabolisme , Toxoplasma/enzymologie , Toxoplasma/pathogénicité , Toxoplasmose/parasitologie
14.
Carbohydr Polym ; 255: 117477, 2021 Mar 01.
Article de Anglais | MEDLINE | ID: mdl-33436240

RÉSUMÉ

The cell surface and extracellular matrix polysaccharide, heparan sulfate (HS) conveys chemical information to control crucial biological processes. HS chains are synthesized in a non-template driven process mainly in the Golgi apparatus, involving a large number of enzymes capable of subtly modifying its substitution pattern, hence, its interactions and biological effects. Changes in the localization of HS-modifying enzymes throughout the Golgi were found to correlate with changes in the structure of HS, rather than protein expression levels. Following BFA treatment, the HS-modifying enzymes localized preferentially in COPII vesicles and at the trans-Golgi. Shortly after heparin treatment, the HS-modifying enzyme moved from cis to trans-Golgi, which coincided with increased HS sulfation. Finally, it was shown that COPI subunits and Sec24 gene expression changed. Collectively, these findings demonstrate that knowledge of the ER-Golgi dynamics of HS-modifying enzymes via vesicular trafficking is a critical prerequisite for the complete delineation of HS biosynthesis.


Sujet(s)
Vésicules COP/enzymologie , Réticulum endoplasmique/enzymologie , Appareil de Golgi/enzymologie , Héparitine sulfate/biosynthèse , Transport biologique/effets des médicaments et des substances chimiques , Bréfeldine A/pharmacologie , Vésicules COP/génétique , Membrane cellulaire/composition chimique , Membrane cellulaire/effets des médicaments et des substances chimiques , Membrane cellulaire/enzymologie , Réticulum endoplasmique/composition chimique , Réticulum endoplasmique/effets des médicaments et des substances chimiques , Régulation de l'expression des gènes , Appareil de Golgi/composition chimique , Appareil de Golgi/effets des médicaments et des substances chimiques , Héparine/pharmacologie , Cellules endothéliales de la veine ombilicale humaine/cytologie , Cellules endothéliales de la veine ombilicale humaine/effets des médicaments et des substances chimiques , Cellules endothéliales de la veine ombilicale humaine/enzymologie , Humains , Plasmides/composition chimique , Plasmides/métabolisme , Culture de cellules primaires , Transfection , Protéines du transport vésiculaire/génétique , Protéines du transport vésiculaire/métabolisme
15.
Cells ; 11(1)2021 12 29.
Article de Anglais | MEDLINE | ID: mdl-35011665

RÉSUMÉ

Mutations in the apically located kidney Na-K-2Cl cotransporter NKCC2 cause type I Bartter syndrome, a life-threatening kidney disorder. We previously showed that transport from the ER represents the limiting phase in NKCC2 journey to the cell surface. Yet very little is known about the ER quality control components specific to NKCC2 and its disease-causing mutants. Here, we report the identification of Golgi alpha1, 2-mannosidase IA (ManIA) as a novel binding partner of the immature form of NKCC2. ManIA interaction with NKCC2 takes place mainly at the cis-Golgi network. ManIA coexpression decreased total NKCC2 protein abundance whereas ManIA knock-down produced the opposite effect. Importantly, ManIA coexpression had a more profound effect on NKCC2 folding mutants. Cycloheximide chase assay showed that in cells overexpressing ManIA, NKCC2 stability and maturation are heavily hampered. Deleting the cytoplasmic region of ManIA attenuated its interaction with NKCC2 and inhibited its effect on the maturation of the cotransporter. ManIA-induced reductions in NKCC2 expression were offset by the proteasome inhibitor MG132. Likewise, kifunensine treatment greatly reduced ManIA effect, strongly suggesting that mannose trimming is involved in the enhanced ERAD of the cotransporter. Moreover, depriving ManIA of its catalytic domain fully abolished its effect on NKCC2. In summary, our data demonstrate the presence of a ManIA-mediated ERAD pathway in renal cells promoting retention and degradation of misfolded NKCC2 proteins. They suggest a model whereby Golgi ManIA contributes to ERAD of NKCC2, by promoting the retention, recycling, and ERAD of misfolded proteins that initially escape protein quality control surveillance within the ER.


Sujet(s)
Dégradation associée au réticulum endoplasmique , Appareil de Golgi/enzymologie , Mannosidases/métabolisme , Membre-1 de la famille-12 des transporteurs de solutés/métabolisme , Animaux , Lignée cellulaire , Humains , Mannose/métabolisme , Mannosidases/composition chimique , Protéines mutantes/composition chimique , Protéines mutantes/métabolisme , Opossum , Proteasome endopeptidase complex/métabolisme , Liaison aux protéines , Domaines protéiques , Pliage des protéines , Stabilité protéique
16.
Chem Pharm Bull (Tokyo) ; 68(8): 753-761, 2020.
Article de Anglais | MEDLINE | ID: mdl-32741916

RÉSUMÉ

The genes GLB1 and GALC encode GLB1 isoform 1 and galactocerebrosidase, respectively, which exhibit ß-galactosidase activity in human lysosomes. GLB1 isoform 1 has been reported to play roles in rare lysosomal storage diseases. Further, its ß-galactosidase activity is the most widely used biomarker of senescent and aging cells; hence, it is called senescence-associated ß-galactosidase. Galactocerebrosidase plays roles in Krabbe disease. We previously reported a novel ß-galactosidase activity in the Golgi apparatus of human cells; however, the protein responsible for this activity could not be identified. Inhibitor-derived chemical probes can serve as powerful tools to identify the responsible protein. In this study, we first constructed a cell-based high-throughput screening (HTS) system for Golgi ß-galactosidase inhibitors, and then screened inhibitors from two compound libraries using the HTS system, in vitro assay, and cytotoxicity assay. An isoflavone derivative was identified among the final Golgi ß-galactosidase inhibitor compound hits. Molecular docking simulations were performed to redesign the isoflavone derivative into a more potent inhibitor, and six designed derivatives were then synthesized. One of the derivatives, ARM07, exhibited potent inhibitory activity against ß-galactosidase, with an IC50 value of 14.8 µM and competitive inhibition with Ki value of 13.3 µM. Furthermore, the in vitro and cellular inhibitory activities of ARM07 exceeded those of deoxygalactonojirimycin. ARM07 may contribute to the development of affinity-based chemical probes to identify the protein responsible for the newly discovered Golgi ß-galactosidase activity. The therapeutic relevance of ARM07 against lysosomal storage diseases and its effect on senescent cells should be evaluated further.


Sujet(s)
Antienzymes/synthèse chimique , Appareil de Golgi/enzymologie , Isoflavones/composition chimique , beta-Galactosidase/antagonistes et inhibiteurs , Sites de fixation , Lignée cellulaire , Cristallographie aux rayons X , Conception de médicament , Antienzymes/métabolisme , Tests de criblage à haut débit , Humains , Concentration inhibitrice 50 , Isoflavones/métabolisme , Cinétique , Simulation de docking moléculaire , Protéines recombinantes/biosynthèse , Protéines recombinantes/composition chimique , Protéines recombinantes/isolement et purification , Relation structure-activité , beta-Galactosidase/génétique , beta-Galactosidase/métabolisme
17.
Elife ; 92020 06 29.
Article de Anglais | MEDLINE | ID: mdl-32597757

RÉSUMÉ

The synthesis of eukaryotic glycans - branched sugar oligomers attached to cell-surface proteins and lipids - is organized like a factory assembly line. Specific enzymes within successive compartments of the Golgi apparatus determine where new monomer building blocks are linked to the growing oligomer. These enzymes act promiscuously and stochastically, causing microheterogeneity (molecule-to-molecule variability) in the final oligomer products. However, this variability is tightly controlled: a given eukaryotic protein type is typically associated with a narrow, specific glycan oligomer profile. Here, we use ideas from the mathematical theory of self-assembly to enumerate the enzymatic causes of oligomer variability and show how to eliminate each cause. We rigorously demonstrate that cells can specifically synthesize a larger repertoire of glycan oligomers by partitioning promiscuous enzymes across multiple Golgi compartments. This places limits on biomolecular assembly: glycan microheterogeneity becomes unavoidable when the number of compartments is limited, or enzymes are excessively promiscuous.


Sujet(s)
Appareil de Golgi/métabolisme , Eucaryotes/enzymologie , Eucaryotes/métabolisme , Glycogen debranching enzyme system/métabolisme , Appareil de Golgi/enzymologie , Complexes multiprotéiques/métabolisme , Polyosides/métabolisme , Multimérisation de protéines , Processus stochastiques
18.
J Clin Invest ; 130(8): 4118-4132, 2020 08 03.
Article de Anglais | MEDLINE | ID: mdl-32597833

RÉSUMÉ

Lysosomal enzymes are synthesized in the endoplasmic reticulum (ER) and transferred to the Golgi complex by interaction with the Batten disease protein CLN8 (ceroid lipofuscinosis, neuronal, 8). Here we investigated the relationship of this pathway with CLN6, an ER-associated protein of unknown function that is defective in a different Batten disease subtype. Experiments focused on protein interaction and trafficking identified CLN6 as an obligate component of a CLN6-CLN8 complex (herein referred to as EGRESS: ER-to-Golgi relaying of enzymes of the lysosomal system), which recruits lysosomal enzymes at the ER to promote their Golgi transfer. Mutagenesis experiments showed that the second luminal loop of CLN6 is required for the interaction of CLN6 with the enzymes but dispensable for interaction with CLN8. In vitro and in vivo studies showed that CLN6 deficiency results in inefficient ER export of lysosomal enzymes and diminished levels of the enzymes at the lysosome. Mice lacking both CLN6 and CLN8 did not display aggravated pathology compared with the single deficiencies, indicating that the EGRESS complex works as a functional unit. These results identify CLN6 and the EGRESS complex as key players in lysosome biogenesis and shed light on the molecular etiology of Batten disease caused by defects in CLN6.


Sujet(s)
Réticulum endoplasmique/enzymologie , Appareil de Golgi/enzymologie , Lysosomes/enzymologie , Protéines membranaires/métabolisme , Complexes multiprotéiques/métabolisme , Animaux , Réticulum endoplasmique/génétique , Appareil de Golgi/génétique , Lysosomes/génétique , Protéines membranaires/génétique , Souris , Souris knockout , Complexes multiprotéiques/génétique , Céroïdes-lipofuscinoses neuronales/enzymologie , Céroïdes-lipofuscinoses neuronales/génétique , Céroïdes-lipofuscinoses neuronales/anatomopathologie , Transport des protéines/génétique
19.
Biochem Soc Trans ; 48(3): 1129-1138, 2020 06 30.
Article de Anglais | MEDLINE | ID: mdl-32573677

RÉSUMÉ

Glycosylphosphatidylinositol (GPI) is a glycolipid added to the C-terminus of a large variety of proteins in eukaryotes, thereby anchoring these proteins to the cell surface. More than 150 different human proteins are modified with GPI, and GPI-anchored proteins (GPI-APs) play critical roles in embryogenesis, neurogenesis, immunity, and fertilization. GPI-APs are biosynthesized in the endoplasmic reticulum (ER) and transported to the plasma membrane via the Golgi apparatus. During transport, GPI-APs undergo structural remodeling that is important for the efficient folding and sorting of GPI-APs. Asparagine-linked glycan-dependent folding and deacylation by PGAP1 work together to ensure that correctly folded GPI-APs are transported from the ER to the Golgi. Remodeling of the GPI lipid moiety is critical for the association of GPI-APs with lipid rafts. On the cell surface, certain GPI-APs are cleaved by GPI cleavage enzymes and released from the membrane, a key event in processes such as spermatogenesis and neurogenesis. In this review, we discuss the enzymes involved in GPI-AP biosynthesis and the fate of GPI-APs in mammalian cells, with a focus on the assembly, folding, degradation, and cleavage of GPI-APs.


Sujet(s)
Membrane cellulaire/métabolisme , Réticulum endoplasmique/enzymologie , Glycosylphosphatidylinositols/biosynthèse , Appareil de Golgi/enzymologie , Animaux , Humains , Mâle , Microdomaines membranaires/enzymologie , Protéines membranaires/métabolisme , Neurogenèse , Domaines protéiques , Pliage des protéines , Transport des protéines , Spermatogenèse
20.
mBio ; 11(3)2020 06 02.
Article de Anglais | MEDLINE | ID: mdl-32487759

RÉSUMÉ

Many species of pathogenic fungi deploy the unfolded protein response (UPR) to expand the folding capacity of the endoplasmic reticulum (ER) in proportion to the demand for virulence-related proteins that traffic through the secretory pathway. Although Ca2+ plays a pivotal role in ER function, the mechanism by which transcriptional upregulation of the protein folding machinery is coordinated with Ca2+ homeostasis is incompletely understood. In this study, we investigated the link between the UPR and genes encoding P-type Ca2+-ATPases in the human-pathogenic mold Aspergillus fumigatus We demonstrate that acute ER stress increases transcription of the srcA gene, encoding a member of the sarco/endoplasmic reticulum Ca2+-ATPase (SERCA) family, as well as that of pmrA, encoding a secretory pathway Ca2+-ATPase (SPCA) in the Golgi membrane. Loss of the UPR transcription factor HacA prevented the induction of srcA and pmrA transcription during ER stress, defining these ER/Golgi Ca2+ pumps as novel downstream targets of this pathway. While deletion of srcA alone caused no major deficiencies, a ΔsrcA/ΔpmrA mutant displayed a severe polarity defect, was hypersensitive to ER stress, and showed attenuated virulence. In addition, cell wall analyses revealed a striking reduction in mannose levels in the absence of both Ca2+ pumps. The ΔhacA mutant was hypersensitive to agents that block calcineurin-dependent signaling, consistent with a functional coupling between the UPR and Ca2+ homeostasis. Together, these findings demonstrate that the UPR integrates the need for increased levels of chaperone and folding enzymes with an influx of Ca2+ into the secretory pathway to support fungal growth, stress adaptation, and pathogenicity.IMPORTANCE The UPR is an intracellular signal transduction pathway that maintains homeostasis of the ER. The pathway is also tightly linked to the expression of virulence-related traits in diverse species of human-pathogenic and plant-pathogenic fungal species, including the predominant mold pathogen infecting humans, Aspergillus fumigatus Despite advances in the understanding of UPR signaling, the linkages and networks that are governed by this pathway are not well defined. In this study, we revealed that the UPR is a major driving force for stimulating Ca2+ influx at the ER and Golgi membranes and that the coupling between the UPR and Ca2+ import is important for virulence, cell wall biosynthesis, and resistance to antifungal compounds that inhibit Ca2+ signaling.


Sujet(s)
Adenosine triphosphatases/métabolisme , Aspergillus fumigatus/enzymologie , Aspergillus fumigatus/pathogénicité , Paroi cellulaire/physiologie , Stress du réticulum endoplasmique , Réponse aux protéines mal repliées , Cellules A549 , Pneumocytes/microbiologie , Animaux , Aspergillus fumigatus/génétique , Calcium/métabolisme , Réticulum endoplasmique/enzymologie , Femelle , Protéines fongiques/génétique , Protéines fongiques/métabolisme , Appareil de Golgi/enzymologie , Humains , Mâle , Souris , Transduction du signal , Virulence
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