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1.
Sci Rep ; 14(1): 19985, 2024 08 28.
Article de Anglais | MEDLINE | ID: mdl-39198558

RÉSUMÉ

Degradation of oceanic plastic waste leads to the formation of microplastics that are ingested by a wide range of animals. Yet, the amounts that are taken up, especially by small zooplankton, are largely unknown. This is mostly due to the complex methodology that is required for isolating ingested microplastics from organisms. We developed customised, effective and benign digestion protocols for four important zooplankton taxa (copepods, euphausiids, chaetognaths and fish larvae), and assessed their digestion efficacy and their potential to cause particle loss or to alter microplastics using six polymers (HDPE, LDPE, PS, PET, PVC, PMMA). All protocols are based on an incubation of the organic matrix with 10% KOH at 38 °C, which is optionally combined with digestive enzymes (chitinase, proteinase K). This yielded digestion efficacies of > 98.2%, recovery rates of > 91.8%, < 2.4% change in microplastics' size, while no visual alteration of the microplastics and no changes in their spectra were observed when analysing them with a hyperspectral imaging camera. The proposed protocols are inexpensive (< 2.15 € per sample), but require several days when enzymatic digestion is included. They will facilitate research on microplastic ingestion by small marine organisms and thus enable well-founded conclusions about the threat that microplastics pose to these animals as well as about the role of biota in determining the vertical distribution of microplastics in oceanic environments.


Sujet(s)
Copepoda , Poissons , Larve , Microplastiques , Animaux , Zooplancton/métabolisme , Polluants chimiques de l'eau , Digestion
2.
Syst Parasitol ; 101(5): 55, 2024 Aug 12.
Article de Anglais | MEDLINE | ID: mdl-39133223

RÉSUMÉ

A taxonomic study of deep-sea polychaetes collected at a depth of 2,805 m off the northern coast of California revealed a scaleworm of the family Sigalionidae with an attached parasitic copepod. The copepod represents an undescribed genus of the family Herpyllobiidae, comprising mesoparasitic copepods chiefly recorded from polychaetes of the family Polynoidae. Blakerius gen. nov. diverges from the other herpyllobiid genera by its possession of 1) a chalice-shaped ectosoma with several protuberances along the posterior margin and a long cylindrical shaft with a hyaline coating and integumental sculpturing, a short stalk with a small, anteriorly placed sclerotized ring, 2) a relatively large, discoid-shaped endosoma with digitiform process, and 3) attached male copepodids with 3-segmented antennules, containing limbless sac-like males. The new genus is compared with other herpyllobiids. This discovery increases the number of known herpyllobiid genera to six and is the first record of a herpyllobiid parasitizing a sigalionid polychaete.urn: lsid: zoobank.org:pub:5E31FEED-D3EB-460E-AEA4-02A9D3A778D6.


Sujet(s)
Copepoda , Polychaeta , Spécificité d'espèce , Animaux , Copepoda/classification , Copepoda/anatomie et histologie , Polychaeta/parasitologie , Mâle , Californie , Femelle
3.
PLoS One ; 19(8): e0309215, 2024.
Article de Anglais | MEDLINE | ID: mdl-39163380

RÉSUMÉ

This study presents an Agent-Based Model (ABM) simulation to assess the impact of varying migration routes on sea lice (Caligus clemensi) infestation levels in juvenile wild sockeye salmon (Oncorhynchus nerka) in the Discovery Islands, British Columbia, Canada. This research highlights the importance of migratory routes in determining the extent of exposure to sea lice originating from nearby salmon farms. Three northward out-migration routes were modelled, each exposing the fish to different levels of infestation pressure based on proximity to salmon farms. The ABM incorporates spatially explicit migration patterns of juvenile sockeye salmon using a detailed raster map of the Discovery Islands. Key variables such as swimming speed, progression rate, and infestation levels were integrated into the model, offering a comprehensive analysis of migration and infestation dynamics. The study revealed that infestation rate is highly variable, depending on migration routes. Specifically, salmon traveling longer migration routes with lower infestation pressure may experience higher sea lice loads compared to those on shorter routes with higher infestation pressure. This underscores the role of low infestation pressures and the critical influence of swimming speed, which affects exposure time, and thus infestation rates. Additionally, the study conducted a sensitivity analysis to understand the influence of various parameters on infestation rates. This analysis highlighted the importance of swimming speed and progression rate, particularly in routes closer to the farms. The findings suggest that slower swimming speeds and meandering routes increase exposure to lice, thereby elevating infestation levels. The research contributes to understanding the dynamics of sea lice transmission and its relationship with salmon migration patterns. It underscores the necessity of considering migratory routes and farm proximity in managing and mitigating the impact of sea lice infestation on wild salmon populations. This study's insights are crucial for developing strategies to balance aquaculture practices with the conservation of wild salmon.


Sujet(s)
Migration animale , Copepoda , Maladies des poissons , Saumon , Animaux , Saumon/parasitologie , Saumon/physiologie , Migration animale/physiologie , Maladies des poissons/parasitologie , Copepoda/physiologie , Colombie-Britannique , Aquaculture
4.
Proc Natl Acad Sci U S A ; 121(35): e2407876121, 2024 Aug 27.
Article de Anglais | MEDLINE | ID: mdl-39159378

RÉSUMÉ

Coevolution between predator and prey plays a central role in shaping the pelagic realm and may have significant implications for marine ecosystems and nutrient cycling dynamics. The siliceous diatom frustule is often assumed to have coevolved with the silica-lined teeth of copepods, but empirical evidence of how this relationship drives natural selection and evolution is still lacking. Here, we show that feeding on diatoms causes significant wear and tear on copepod teeth and that this leads to copepods becoming selective feeders. Teeth from copepods feeding on thick-shelled diatoms were more likely to be broken or cracked than those feeding on a dinoflagellate. When fed a large diatom, all analyzed teeth had visible wear. Our results underscore the importance of the predator-prey arms race as a driving force in planktonic evolution and diversity.


Sujet(s)
Évolution biologique , Copepoda , Diatomées , Plancton , Animaux , Copepoda/physiologie , Plancton/physiologie , Comportement prédateur/physiologie , Écosystème , Silice , Dent
5.
Sci Total Environ ; 950: 174999, 2024 Nov 10.
Article de Anglais | MEDLINE | ID: mdl-39097011

RÉSUMÉ

The patchy distribution of microplastics (MP) and their size range similar to planktonic organisms, are likely to have major ecological consequences, through MP ingestion, food dilution, and transfer across trophic levels. Our study applied a community module using tritrophic food chain with zooplankton as prey, and a planktivorous seabass fry as predator. We conducted a series of feeding experiments and recorded the direct uptake of MP under six different concentrations ranging from 25 to 800 particles L-1. We also estimated the indirect transfer of MP via trophic link. The ingestion rates for Brachionus plicatilis, Mesocyclops isabellae, and Lates calcarifer, were 3.7 ± 0.3 MP ind-1 min-1, 1.69 ± 0.1 MP ind-1 min-1, and 3.51 ± 0.52 MP ind-1 h-1, respectively. In the presence of a natural diet, rotifers and copepods ingested significantly lower number, whereas, fish fry ingested a higher number of MP, suggesting further vulnerability to the consumers of MP-contaminated fish and potential biomagnification at higher trophic levels. Overall, the MP uptake rate increased with increasing concentration, and finally leveled off, indicating a type II functional response to MP concentration. The presence of natural diet led to a lower Km value. In the indirect transfer experiment, 74 % of B. plicatilis and 78 % of M. isabellae individuals were contaminated with MP, when offered as prey. Brachionid mastax and MP particles were observed in the gut of copepods. The fish fry gut content also recorded brachionid mastax, MP-contaminated copepods, and MP particles, showing direct evidence of trophic transfer pointing to a cascading effect on higher trophic levels including humans via piscivory.


Sujet(s)
Chaine alimentaire , Microplastiques , Polluants chimiques de l'eau , Zooplancton , Animaux , Zooplancton/physiologie , Régime alimentaire , Surveillance de l'environnement , Copepoda/physiologie , Rotifera/physiologie
6.
PLoS One ; 19(8): e0308846, 2024.
Article de Anglais | MEDLINE | ID: mdl-39190700

RÉSUMÉ

Globally, marine heatwave frequency, intensity, and duration are on the rise, posing a significant threat to plankton communities, the foundational elements of the marine food web. This study investigates the ecological and physiological responses of a temperate plankton community in the Thau lagoon, north-western Mediterranean, to a simulated +3°C ten-day heatwave followed by a ten-day post-heatwave period in in-situ mesocosms. Our analyses encompassed zooplankton grazing, production, community composition in water and sediment traps, as well as oxidative stress and anti-oxidant biomarkers. The results revealed increased abundances of harpacticoid copepods and polychaete larvae during the simulated heatwave and post-heatwave event. Sediment trap data indicated elevated mortality, particularly dominated by polychaete larvae during the post-heatwave period. Oxidative stress biomarker (lipid peroxidation LPX) levels in the plankton community correlated with temperature, signaling cellular damage during the heatwave. LPX increased and proteins decreased with increasing salinity during the experiment. Offspring production peaked during the post-heatwave phase. Notably, the calanoid copepod Acartia clausi exhibited a preference for ciliates as its primary prey, constituting 20% of the overall available prey. Our findings suggest a potential shift in coastal zooplankton communities during future marine heatwaves, transitioning from calanoid mesozooplankton dominance to a system featuring meroplankton and/or harpacticoid copepods. Although species preying on microzooplankton may gain advantages in such conditions, the study underscores the damaging impact of heatwaves on organismal lipids, with potential consequences for reproduction, growth, and survival within marine ecosystems.


Sujet(s)
Stress oxydatif , Zooplancton , Animaux , Zooplancton/physiologie , Mer Méditerranée , Stress oxydatif/physiologie , Copepoda/physiologie , Chaine alimentaire , Écosystème , Peroxydation lipidique , Marqueurs biologiques , Chaleur extrême
7.
Zoolog Sci ; 41(4): 377-384, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-39093283

RÉSUMÉ

Sea urchins have a wide variety of symbionts on their body surfaces and inside their bodies. Copepods of the genus Clavisodalis (Taeniacanthidae) collected from the esophagus of sea urchins of the genera Diadema and Echinothrix in southern Japan were identified based on their morphological characteristics, and molecular analysis was conducted to determine whether genetic variation occurs in copepods from different localities and hosts. Morphological observations identified individuals from southern Japan as Clavisodalis sentifer Dojiri and Humes, 1982, making this the first record of this species in the northern hemisphere and the first record of its genus in Japan. Morphological and molecular analysis suggested that the copepod specimens collected from multiple hosts across two genera would be the same species. Considering the typically observed high level of host specificity among taeniacanthid copepods, the utilization of hosts from two genera by C. sentifer is noteworthy.


Sujet(s)
Copepoda , Echinoidea , Animaux , Copepoda/génétique , Copepoda/anatomie et histologie , Copepoda/physiologie , Echinoidea/génétique , Echinoidea/parasitologie , Océan Pacifique , Phylogenèse , Japon , Spécificité d'hôte
8.
Syst Parasitol ; 101(5): 54, 2024 Aug 09.
Article de Anglais | MEDLINE | ID: mdl-39120762

RÉSUMÉ

Ergasilus lizae Krøyer, 1863 is a parasitic copepod known to infect mullets (Mugilidae) in different parts of the world. It was originally reported from the east coast of North America, but the original description lacks enough detail, making identification with this information difficult. In this study, we provide a redescription of E. lizae found on Mugil curema Valenciennes and M. cephalus Linnaeus, caught in two coastal lagoons of northwestern Mexico during two climatic seasons: warm/rainy and cold/dry. The prevalence of this parasite was higher in the warm season than in the cold season. To facilitate the species identification, new sequences of the barcoding gene (COI mtDNA) of E. lizae were generated and compared against unpublished sequences of E. lizae available in the Barcode of Life Database (BOLD). Our results suggest that the sequences of BOLD possibly belong to a species misidentified as E. lizae.


Sujet(s)
Copepoda , Codage à barres de l'ADN pour la taxonomie , Saisons , Spécificité d'espèce , Animaux , Copepoda/génétique , Copepoda/anatomie et histologie , Copepoda/classification , Mexique , Smegmamorpha/parasitologie , Phylogenèse , Complexe IV de la chaîne respiratoire/génétique
9.
Chemosphere ; 363: 142894, 2024 Sep.
Article de Anglais | MEDLINE | ID: mdl-39029709

RÉSUMÉ

Tire wear particles (TWPs) are considered an important component of microplastic pollution in the marine environment and occur together with a variety of aquatic pollutants, including frequently detected bisphenols. The adverse effects of TWPs or bisphenols on aquatic organisms have been widely reported. However, the combined toxicity of TWPs and bisphenols is still unknown. In this study, the combined toxicity of both pristine (p-) and aged TWPs (a-TWPs) and four bisphenols ((bisphenol A (BPA), bisphenol F (BPF), bisphenol S (BPS), and bisphenol AF (BPAF)) to Tigriopus japonicus was evaluated. TWPs increased the toxicity of BPA and BPF but decreased the toxicity of BPAF. For BPS, there was synergistic toxic effect in the presence of p-TWPs, but slightly antagonistic effect was observed in the presence of a-TWPs. This adsorption of BPAF by TWPs resulted in a reduction of its toxicity to the copepod. A-TWPs could release more Zn than p-TWPs, and the released Zn contributed to the synergistic effect of TWPs and BPA or BPF. The aggregation formed by TWPs in certain sizes (e.g., 90-110 µm) could cause intestinal damage and lipid peroxidation in T. japonicus. The synergistic effect of p-TWPs and BPS might be due to the aggregation size of the binary mixture. The results of the current study will be important to understand the combined toxic effect of TWPs and bisphenols and the potential toxic mechanisms of the binary mixture.


Sujet(s)
Composés benzhydryliques , Copepoda , Phénols , Polluants chimiques de l'eau , Phénols/toxicité , Animaux , Composés benzhydryliques/toxicité , Polluants chimiques de l'eau/toxicité , Copepoda/effets des médicaments et des substances chimiques , Microplastiques/toxicité , Caoutchouc/toxicité , Caoutchouc/composition chimique , Sulfones/toxicité
10.
Harmful Algae ; 137: 102659, 2024 08.
Article de Anglais | MEDLINE | ID: mdl-39003023

RÉSUMÉ

The study of interactions between copepods of the genus Acartia and toxic dinoflagellates of the genus Alexandrium has been an important topic during the last four decades. Feeding behavior and physiological responses of copepods have been studied in laboratory and field experiments, sometimes with contradictory results. More recently, an evolutionary adaptive mechanism leading to enhanced tolerance of Alexandrium toxins in a population of Acartia experiencing chronic exposure to these dinoflagellates has been reported. In the present work, we collected data from the existing studies on the effects of Alexandrium on feeding, reproduction and mortality of Acartia. With these data, we performed a systematic review consisting of a secondary analysis employing general or generalized linear models, weighting data from different studies by the reciprocal of their standard deviation. Our first aim was to overcome shortcomings of individual studies: limited ranges of the variables and overlooked variables (experiment length, population adaptation). These shortcomings could have led to inconsistent conclusions by missing heterogeneous patterns in copepod responses and in the interactions between variables. Our second aim was to test the enhanced physiological performance of chronically exposed relative to naïve copepod populations over a wide geographic range. We found that the feeding rate is enhanced by increased food biomass, irrespective of the food type. Toxins do not have a clear effect on egg production and have a bi-phasic effect on egg hatching success, which was negative above a specific threshold. Toxins also increased mortality. Experiment length had a positive effect on egg production and negative on egg hatching. Naïve copepod populations showed consistently lower ingestion of Alexandrium and egg hatching rates, thereby supporting the spread of the aforementioned mechanism across populations over a wide geographic range.


Sujet(s)
Copepoda , Dinoflagellida , Comportement alimentaire , Reproduction , Animaux , Dinoflagellida/physiologie , Copepoda/physiologie , Modèles linéaires
11.
Huan Jing Ke Xue ; 45(7): 3983-3994, 2024 Jul 08.
Article de Chinois | MEDLINE | ID: mdl-39022946

RÉSUMÉ

In order to understand the stability of the zooplankton and phytoplankton communities in the Guizhou plateau reservoir environment, the process of reservoir water quality change affecting the stability of plankton was studied. The changes in the plankton community and water quality in three different nutrient reservoirs (Huaxi Reservoir, Goupitan Reservoir, and Hailong Reservoir) were studied from October 2020 to August 2021. The stability of the zooplankton and phytoplankton communities was studied using time-lag analysis (TLA). Variance decomposition analysis (VPA) was used to explore the response of the two communities to environmental changes. The driving factors of plankton community changes in reservoirs were also revealed. The results showed that Huaxi Reservoir and Goupitan Reservoir were mesotrophic reservoirs, and Hailong Reservoir was a eutrophic reservoir. The average comprehensive nutrition indices of the three reservoirs were 44.07, 44.68, and 50.25. A total of 51 species of zooplankton rotifers, 39 species of rotifers, three species of copepods, and nine species of cladocera were identified. Among them, the abundance of rotifers was the highest, accounting for 85.96%. A total of seven phyla and 73 species of phytoplankton were identified, including 16 species in the phylum Cyanophyta, 32 species in the phylum Chlorophyta, 16 species in the phylum Diatoma, three species in the phylum Chlorophyta, four species in the phylum Euglenophyta, and one species each in the phyla Cryptophyta and Chrysophyta. Among them, the abundance of cyanobacteria and diatoms was the highest, accounting for 66.2% and 27.35%, respectively. The median absolute deviation (MAD) of the Bray-Curtis distance of zooplankton and phytoplankton community in the three reservoirs were 0.67 and 0.65 in Huaxi Reservoir, 0.80 and 0.69 in Goupitan Reservoir, and 0.85 and 0.47 in Hailong Reservoir, respectively. The larger the value, the greater the variation in the community. The absolute value of the slope of zooplankton was greater than that of phytoplankton in the TLA results, and the absolute values of the slopes were 0.018 and 0.004, respectively. The larger the absolute value of the slope, the faster the community variability. The zooplankton community in the three reservoirs was less stable than the phytoplankton community and more sensitive to environmental changes, and the degree of variation was greater. The higher the degree of eutrophication of the reservoir, the more obvious this phenomenon. VPA showed that the changes in plankton communities in Huaxi Reservoir and Hailong Reservoir were mainly influenced by water temperature and eutrophication factors. The changes in planktonic community in Goupitan Reservoir were mainly influenced by water temperature and chemical factors. The driving factors of Huaxi Reservoir were water temperature, TP, permanganate index, and SD. The driving factors of Goupitan Reservoir were water temperature, NO3-- N, and pH. The driving factors of Hailong Reservoir were water temperature and TP. Nutrients and water temperature were the main factors affecting the stability of plankton communities in reservoirs.


Sujet(s)
Surveillance de l'environnement , Phytoplancton , Zooplancton , Phytoplancton/croissance et développement , Phytoplancton/classification , Zooplancton/classification , Chine , Animaux , Rotifera/croissance et développement , Qualité de l'eau , Eutrophisation , Copepoda/croissance et développement , Cladocera/croissance et développement , Plancton/classification , Cyanobactéries/croissance et développement , Dynamique des populations
12.
PLoS One ; 19(7): e0306440, 2024.
Article de Anglais | MEDLINE | ID: mdl-38991030

RÉSUMÉ

Basin-scale patterns of biodiversity for zooplankton in the ocean may provide valuable insights for understanding the impact of climate change and global warming on the marine ecosystem. However, studies on this topic remain scarce or unavailable in vast regions of the world ocean, particularly in large regions where the amount and quality of available data are limited. In this study, we used a 27-year (1993-2019) database on species occurrence of planktonic copepods in the South Pacific, along with associated oceanographic variables, to examine their spatial patterns of biodiversity in the upper 200 m of the ocean. The aim of this study was to identify ecological regions and the environmental predictors explaining such patterns. It was found that hot and cold spots of diversity, and distinctive species assemblages were linked to major ocean currents and large regions over the basin, with increasing species richness over the subtropical areas on the East and West sides of the South Pacific. While applying the spatial models, we showed that the best environmental predictors for diversity and species composition were temperature, salinity, chlorophyll-a concentration, oxygen concentration, and the residual autocorrelation. Nonetheless, the observed spatial patterns and derived environmental effects were found to be strongly influenced by sampling coverage over space and time, revealing a highly under-sampled basin. Our findings provide an assessment of copepods diversity patterns and their potential drivers for the South Pacific Ocean, but they also stress the need for strengthening the data bases of planktonic organisms, as they can act as suitable indicators of ecosystem response to climate change at basin scale.


Sujet(s)
Biodiversité , Changement climatique , Copepoda , Animaux , Copepoda/physiologie , Océan Pacifique , Zooplancton/physiologie , Écosystème , Température , Chlorophylle A/analyse , Salinité
13.
J Parasitol ; 110(4): 250-262, 2024 Jul 01.
Article de Anglais | MEDLINE | ID: mdl-38972667

RÉSUMÉ

A total of 366 individuals of Lutjanus argentiventris (Peters, 1869) were collected over a 5-yr period (October 2018 to June 2022) from Acapulco Bay, Mexico. Parasite communities in Lutjanus argentiventris were quantified and analyzed to determine the main factors that generate changes in species richness and/or species composition over time. The digeneans and copepods were the best-represented parasite groups. The parasite communities were characterized by a high numerical dominance of ectoparasites, mainly isopod larvae. Species richness at the component community level (9-23 species) was similar to the reported richness in other Lutjanus spp. The parasite communities of Lutjanus argentiventris exhibited high variability in species composition, suggesting that each parasite species may respond differently to environmental changes. However, the species richness and diversity were fairly stable over time; therefore, a clear pattern of interannual variation was not observed. Variations in the community structure probably were due to factors such as host traits (e.g., feeding behavior and body size), and possible interannual differences in environmental factors amplified by the occurrence of the anomalous event of La Niña.


Sujet(s)
Biodiversité , Copepoda , Maladies des poissons , Perciformes , Animaux , Mexique/épidémiologie , Perciformes/parasitologie , Maladies des poissons/parasitologie , Maladies des poissons/épidémiologie , Copepoda/classification , Copepoda/physiologie , Isopoda/classification , Isopoda/physiologie
14.
Sci Total Environ ; 948: 174739, 2024 Oct 20.
Article de Anglais | MEDLINE | ID: mdl-39009142

RÉSUMÉ

The risk assessment of an expanding array of emerging contaminants in aquatic ecosystems and the establishment of water quality criteria rely on species sensitivity distribution (SSD), necessitating ample multi-trophic toxicity data. Computational methods, such as quantitative structure-activity relationship (QSAR), enable the prediction of specific toxicity data, thus mitigating the need for costly experimental testing and exposure risk assessment. In this study, robust QSAR models for four aquatic species (Rana pipiens, Crassostrea virginica, Asellus aquaticus, and Lepomis macrochirus) were developed using leave-one-out (LOO) screening variables and the partial least squares algorithm to predict toxicity data for paraquat, bisphenol A, and carbamazepine. These predicted data can be integrated with experimental data to construct SSD models and derive hazardous concentration for 5 % of species (HC5) for the criterion maximum concentration. The chronic water quality criterion for paraquat, bisphenol A, and carbamazepine were determined at 6.7, 11.1, and 3.5 µg/L, respectively. The QSAR-SSD approach presents a viable and cost-effective method for deriving water quality criteria for other emerging contaminants.


Sujet(s)
Composés benzhydryliques , Carbamazépine , Paraquat , Phénols , Relation quantitative structure-activité , Polluants chimiques de l'eau , Qualité de l'eau , Phénols/toxicité , Composés benzhydryliques/toxicité , Polluants chimiques de l'eau/toxicité , Polluants chimiques de l'eau/analyse , Carbamazépine/toxicité , Paraquat/toxicité , Animaux , Appréciation des risques , Copepoda/effets des médicaments et des substances chimiques
15.
Protein Sci ; 33(8): e5115, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-39023083

RÉSUMÉ

Gaussia luciferase (GLuc) is one of the most luminescent luciferases known and is widely used as a reporter in biochemistry and cell biology. During catalysis, GLuc undergoes inactivation by irreversible covalent modification. The mechanism by which GLuc generates luminescence and how it becomes inactivated are however not known. Here, we show that GLuc unlike other enzymes has an extensively disordered structure with a minimal hydrophobic core and no apparent binding pocket for the main substrate, coelenterazine. From an alanine scan, we identified two Arg residues required for light production. These residues separated with an average of about 22 Å and a major structural rearrangement is required if they are to interact with the substrate simultaneously. We furthermore show that in addition to coelenterazine, GLuc also can oxidize furimazine, however, in this case without production of light. Both substrates result in the formation of adducts with the enzyme, which eventually leads to enzyme inactivation. Our results demonstrate that a rigid protein structure and substrate-binding site are no prerequisites for high enzymatic activity and specificity. In addition to the increased understanding of enzymes in general, the findings will facilitate future improvement of GLuc as a reporter luciferase.


Sujet(s)
Luciferases , Luciferases/composition chimique , Luciferases/métabolisme , Luciferases/génétique , Animaux , Luminescence , Copepoda/enzymologie , Modèles moléculaires , Imidazoles/composition chimique , Imidazoles/métabolisme , Protéines intrinsèquement désordonnées/composition chimique , Protéines intrinsèquement désordonnées/métabolisme , Pyrazines/composition chimique , Pyrazines/métabolisme
16.
Bull Environ Contam Toxicol ; 113(1): 1, 2024 Jun 30.
Article de Anglais | MEDLINE | ID: mdl-38949743

RÉSUMÉ

Microplastics (MPs) pollution is a profound problem around the world yet it's study on the effect on zooplankton including copepods are very limited. The study was conducted between January 2021 and January 2022 in the Lower Meghna Estuary to investigate MPs ingestion in two different family of copepod: Calanoid and Cyclopoid. A method of acid digestion along with Scanning Electron Microscope (SEM) was used to identify MPs ingested by copepods from the conducted area. However, three types of MPs namely fiber, fragment and foam were extracted from this copepod biomass. Fibers represent highest (> 50%) of the ingested MPs from both group of copepod that exceed fragments and foams in all sampling stations. The overall ingestion rate of Calanoid was found higher (0.084 ± 0.002 particles/individual) compared to the Cyclopoid group (0.077 ± 0.001 particles/individual). The results of the study have effectively illustrated that copepod, obtained from multiple sampling sites within the Lower Meghna Estuary, display a propensity to ingest MPs and subsequently endangering the food security of seafood industry.


Sujet(s)
Copepoda , Surveillance de l'environnement , Estuaires , Microplastiques , Polluants chimiques de l'eau , Animaux , Microplastiques/analyse , Polluants chimiques de l'eau/analyse , Bangladesh , Consommation alimentaire
17.
Sci Rep ; 14(1): 15240, 2024 07 02.
Article de Anglais | MEDLINE | ID: mdl-38956386

RÉSUMÉ

Major vault protein (MVP) is the main component of the vault complex, which is a highly conserved ribonucleoprotein complex found in most eukaryotic organisms. MVP or vaults have previously been found to be overexpressed in multidrug-resistant cancer cells and implicated in various cellular processes such as cell signaling and innate immunity. The precise function of MVP is, however, poorly understood and its expression and probable function in lower eukaryotes are not well characterized. In this study, we report that the Atlantic salmon louse expresses three full-length MVP paralogues (LsMVP1-3). Furthermore, we extended our search and identified MVP orthologues in several other ecdysozoan species. LsMVPs were shown to be expressed in various tissues at both transcript and protein levels. In addition, evidence for LsMVP to assemble into vaults was demonstrated by performing differential centrifugation. LsMVP was found to be highly expressed in cement, an extracellular material produced by a pair of cement glands in the adult female salmon louse. Cement is important for the formation of egg strings that serve as protective coats for developing embryos. Our results imply a possible novel function of LsMVP as a secretory cement protein. LsMVP may play a role in structural or reproductive functions, although this has to be further investigated.


Sujet(s)
Copepoda , Particules de Vault , Animaux , Particules de Vault/métabolisme , Copepoda/métabolisme , Salmo salar/parasitologie , Salmo salar/métabolisme , Femelle , Phylogenèse , Séquence d'acides aminés
18.
BMC Biol ; 22(1): 160, 2024 Jul 29.
Article de Anglais | MEDLINE | ID: mdl-39075472

RÉSUMÉ

BACKGROUND: Salmonid species have followed markedly divergent evolutionary trajectories in their interactions with sea lice. While sea lice parasitism poses significant economic, environmental, and animal welfare challenges for Atlantic salmon (Salmo salar) aquaculture, coho salmon (Oncorhynchus kisutch) exhibit near-complete resistance to sea lice, achieved through a potent epithelial hyperplasia response leading to rapid louse detachment. The molecular mechanisms underlying these divergent responses to sea lice are unknown. RESULTS: We characterized the cellular and molecular responses of Atlantic salmon and coho salmon to sea lice using single-nuclei RNA sequencing. Juvenile fish were exposed to copepodid sea lice (Lepeophtheirus salmonis), and lice-attached pelvic fin and skin samples were collected 12 h, 24 h, 36 h, 48 h, and 60 h after exposure, along with control samples. Comparative analysis of control and treatment samples revealed an immune and wound-healing response that was common to both species, but attenuated in Atlantic salmon, potentially reflecting greater sea louse immunomodulation. Our results revealed unique but complementary roles of three layers of keratinocytes in the epithelial hyperplasia response leading to rapid sea lice rejection in coho salmon. Our results suggest that basal keratinocytes direct the expansion and mobility of intermediate and, especially, superficial keratinocytes, which eventually encapsulate the parasite. CONCLUSIONS: Our results highlight the key role of keratinocytes in coho salmon's sea lice resistance and the diverged biological response of the two salmonid host species when interacting with this parasite. This study has identified key pathways and candidate genes that could be manipulated using various biotechnological solutions to improve Atlantic salmon sea lice resistance.


Sujet(s)
Copepoda , Maladies des poissons , Hyperplasie , Kératinocytes , Oncorhynchus kisutch , Salmo salar , Animaux , Copepoda/physiologie , Maladies des poissons/parasitologie , Salmo salar/parasitologie , Hyperplasie/médecine vétérinaire , Kératinocytes/parasitologie , Résistance à la maladie/génétique , Interactions hôte-parasite
19.
Syst Parasitol ; 101(4): 49, 2024 Jul 05.
Article de Anglais | MEDLINE | ID: mdl-38967719

RÉSUMÉ

Taeniacanthus aulacocephali Izawa, 2021 (Copepoda: Cyclopoida: Taeniacanthidae) was redescribed from the branchial cavity and gill filaments of Uranoscopus japonicus Houttuyn (Perciformes: Uranoscopidae) collected from the Pacific coast of the Kochi and Wakayama prefectures, Japan. This is the second record of the copepod, and the finding from U. japonicus represents the new host record. The species is characterized by several distinguishing features: 1) a decrease in the width of the habitus between the second and fourth pedigerous segments; 2) the ratio of prosome/body length; 3) the presence of eight setae on the exopodal terminal segment of leg 2; 4) an un-bifurcated maxilliped claw surrounded by 14-28 transverse ridges; and 5) the presence of an inner coxal seta on legs 2 and 3. The newly collected specimens were subjected to a modified non-destructive DNA extraction method and morphological description based on the same copepod individual, while preserving a morphologically describable specimen. Sequences of 18S rDNA, 28S rDNA and the mitochondrial cytochrome c oxidase subunit 1 mitochondrial gene (cox1) were obtained.


Sujet(s)
Copepoda , Spécificité d'espèce , Animaux , Copepoda/anatomie et histologie , Copepoda/classification , Copepoda/génétique , Japon , Océan Pacifique , Perciformes/parasitologie , Phylogenèse , ARN ribosomique 28S/génétique , Complexe IV de la chaîne respiratoire/génétique
20.
Environ Monit Assess ; 196(8): 711, 2024 Jul 08.
Article de Anglais | MEDLINE | ID: mdl-38976165

RÉSUMÉ

The study investigates the pollution characteristics of 16 priority PAHs, accumulated in copepods from a major fishing harbour and its adjacent coastal waters of Veraval, west coast of India. The total PAH accumulation is in the range of 922.16-27,807.49 ng g-1 dw, with the mean concentration of 5776.59 ng g-1 dw. High concentrations of PAHs were present in the copepod samples from inside the harbour. Notably, there was no significant correlation between the lipid content of copepods and the accumulation of PAHs. The molecular diagnostic ratio method (MDR) indicates that the PAH sources are petrogenic in origin, while principal component analysis (PCA) points to petroleum, coal combustion and vehicular emission sources. Total cancerous PAHs (C-PAHs) in the study area dominate by 40% of the total PAHs identified; moreover, the bioaccumulation factor (BAF) is very high in the offshore area, which is also a fishing ground. The global relevance and magnitude of the present study in the Veraval, one of the prime seafood exporting hubs in India, should be dealt with utmost avidity as the accumulation status of PAHs in the zooplankton has never been explored in the Indian coastal waters. Moreover, the current study gives the foremost data on the bioaccumulation status of PAHs in copepods from the tropical waters of India.


Sujet(s)
Copepoda , Surveillance de l'environnement , Hydrocarbures aromatiques polycycliques , Polluants chimiques de l'eau , Copepoda/métabolisme , Hydrocarbures aromatiques polycycliques/métabolisme , Hydrocarbures aromatiques polycycliques/analyse , Animaux , Polluants chimiques de l'eau/métabolisme , Polluants chimiques de l'eau/analyse , Surveillance de l'environnement/méthodes , Inde , Bioaccumulation , Eau de mer/composition chimique
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