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1.
Sci Rep ; 14(1): 15186, 2024 07 02.
Article de Anglais | MEDLINE | ID: mdl-38956313

RÉSUMÉ

Influenza A virus subtype H1N1 can cause severe acute respiratory distress syndrome and death in young children and elderly individuals. H1N1 initiates inflammatory responses that aim to contain and eliminate microbial invaders. Various lipid mediators (LMs) are biosynthesized and play a critical role in fighting viruses during inflammation; thus, by profiling the LMs in patients, researchers can obtain mechanistic insights into diseases, such as the pathways disrupted. To date, the relationship between molecular alterations in LMs and the pathogenesis of H1N1 influenza in children is poorly understood. Here, we employed a targeted liquid chromatography coupled with tandem mass spectrometry (LC‒MS/MS) to profile LMs in serum from children with H1N1 influenza (H1N1 children) and recovered children. We found that 22 LM species were altered in H1N1 children with mild symptoms. Analysis of the LM profiles of recovered children revealed a decrease in the levels of thromboxane B2 (TxB2) and thromboxane B3 (TxB3) and an increase in the levels of other 8 altered LM species associated with H1N1 influenza, including cytochrome P450 (CYP) enzyme-derived dihydroxyeicosatrienoic acids (DiHETrEs) and hydroxyeicosatetraenoic acids (HETEs) from arachidonic acid (AA), and epoxyoctadecamonoenoic acids (EpOMEs) from linoleic acid (LA). Taken together, the results of this study revealed that serum LMs change dynamically in H1N1 children with mild symptoms. The dramatically altered LMs in H1N1 children could serve as a basis for potential therapeutics or adjuvants against H1N1 influenza.


Sujet(s)
Sous-type H1N1 du virus de la grippe A , Grippe humaine , Spectrométrie de masse en tandem , Humains , Grippe humaine/sang , Grippe humaine/virologie , Enfant , Mâle , Femelle , Enfant d'âge préscolaire , Lipides/sang , Chromatographie en phase liquide , Nourrisson , Lipidomique/méthodes
2.
Nat Commun ; 15(1): 5593, 2024 Jul 03.
Article de Anglais | MEDLINE | ID: mdl-38961067

RÉSUMÉ

Human cases of avian influenza virus (AIV) infections are associated with an age-specific disease burden. As the influenza virus N2 neuraminidase (NA) gene was introduced from avian sources during the 1957 pandemic, we investigate the reactivity of N2 antibodies against A(H9N2) AIVs. Serosurvey of healthy individuals reveal the highest rates of AIV N2 antibodies in individuals aged ≥65 years. Exposure to the 1968 pandemic N2, but not recent N2, protected against A(H9N2) AIV challenge in female mice. In some older adults, infection with contemporary A(H3N2) virus could recall cross-reactive AIV NA antibodies, showing discernable human- or avian-NA type reactivity. Individuals born before 1957 have higher anti-AIV N2 titers compared to those born between 1957 and 1968. The anti-AIV N2 antibodies titers correlate with antibody titers to the 1957 N2, suggesting that exposure to the A(H2N2) virus contribute to this reactivity. These findings underscore the critical role of neuraminidase immunity in zoonotic and pandemic influenza risk assessment.


Sujet(s)
Anticorps antiviraux , Réactions croisées , Sous-type H3N2 du virus de la grippe A , Grippe humaine , Sialidase , Pandémies , Sialidase/immunologie , Sialidase/génétique , Animaux , Humains , Anticorps antiviraux/immunologie , Anticorps antiviraux/sang , Sous-type H3N2 du virus de la grippe A/immunologie , Femelle , Réactions croisées/immunologie , Souris , Grippe humaine/immunologie , Grippe humaine/épidémiologie , Grippe humaine/virologie , Sujet âgé , Sous-type H2N2 du virus de la grippe A/immunologie , Sous-type H2N2 du virus de la grippe A/génétique , Mâle , Infections à Orthomyxoviridae/immunologie , Infections à Orthomyxoviridae/virologie , Infections à Orthomyxoviridae/épidémiologie , Infections à Orthomyxoviridae/médecine vétérinaire , Oiseaux/virologie , Adulte d'âge moyen , Grippe chez les oiseaux/épidémiologie , Grippe chez les oiseaux/immunologie , Grippe chez les oiseaux/virologie , Sous-type H9N2 du virus de la grippe A/immunologie , Adulte , Protéines virales/immunologie , Protéines virales/génétique
3.
J Gen Virol ; 105(7)2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38980150

RÉSUMÉ

Between 2013 and 2017, the A/Anhui/1/13-lineage (H7N9) low-pathogenicity avian influenza virus (LPAIV) was epizootic in chickens in China, causing mild disease, with 616 fatal human cases. Despite poultry vaccination, H7N9 has not been eradicated. Previously, we demonstrated increased pathogenesis in turkeys infected with H7N9, correlating with the emergence of the L217Q (L226Q H3 numbering) polymorphism in the haemagglutinin (HA) protein. A Q217-containing virus also arose and is now dominant in China following vaccination. We compared infection and transmission of this Q217-containing 'turkey-adapted' (ty-ad) isolate alongside the H7N9 (L217) wild-type (wt) virus in different poultry species and investigated the zoonotic potential in the ferret model. Both wt and ty-ad viruses demonstrated similar shedding and transmission in turkeys and chickens. However, the ty-ad virus was significantly more pathogenic than the wt virus in turkeys but not in chickens, causing 100 and 33% mortality in turkeys respectively. Expanded tissue tropism was seen for the ty-ad virus in turkeys but not in chickens, yet the viral cell receptor distribution was broadly similar in the visceral organs of both species. The ty-ad virus required exogenous trypsin for in vitro replication yet had increased replication in primary avian cells. Replication was comparable in mammalian cells, and the ty-ad virus replicated successfully in ferrets. The L217Q polymorphism also affected antigenicity. Therefore, H7N9 infection in turkeys can generate novel variants with increased risk through altered pathogenicity and potential HA antigenic escape. These findings emphasize the requirement for enhanced surveillance and understanding of A/Anhui/1/13-lineage viruses and their risk to different species.


Sujet(s)
Poulets , Furets , Sous-type H7N9 du virus de la grippe A , Grippe chez les oiseaux , Dindons , Animaux , Dindons/virologie , Grippe chez les oiseaux/virologie , Grippe chez les oiseaux/transmission , Sous-type H7N9 du virus de la grippe A/génétique , Sous-type H7N9 du virus de la grippe A/pathogénicité , Poulets/virologie , Virulence , Chine/épidémiologie , Maladies de la volaille/virologie , Maladies de la volaille/transmission , Glycoprotéine hémagglutinine du virus influenza/génétique , Humains , Excrétion virale , Réplication virale , Zoonoses/virologie , Grippe humaine/virologie , Grippe humaine/transmission
4.
Int J Mol Sci ; 25(13)2024 Jun 27.
Article de Anglais | MEDLINE | ID: mdl-39000173

RÉSUMÉ

Tagetes erecta Linn. (TE) is traditionally used to treat cardiovascular, renal, and gastrointestinal diseases. In this study, we investigated the active compounds and targets of TE extract that may exert antiviral effects against influenza A. Active compounds and targets of TE extract were identified using the Traditional Chinese Medicine Systems Pharmacology database (TCSMP). The influenza A-related gene set was screened using GeneCards and the Kyoto Encyclopedia of Genes and Genomes (KEGG). A protein-protein interaction (PPI) network was built to establish the hub targets. Pathway and target studies were conducted using Gene Expression Omnibus (GEO). The interactions between active compounds and potential targets were assessed by molecular docking. An in vitro study was performed using antiviral and plaque reduction assays. From the compound and target search, we identified 6 active compounds and 95 potential targets. We retrieved 887 influenza-associated target genes and determined 14 intersecting core targets between TE and influenza. After constructing a compound-target network, we discovered lutein and beta-carotene to be the key compounds. Next, PPI network analysis identified the top three hub genes associated with influenza (IL-6, HIF1A, and IL-1ß). Similarly, GEO analysis revealed IL-6, TGFB1, and CXCL8 to be the top three target genes. In our docking study, we identified that lutein and IL-6 had the strongest bindings. Our in vitro experimental results revealed that the TE extract exhibited therapeutic rather than prophylactic effects on influenza disease. We identified lutein as a main active compound in TE extract, and IL-6 as an important target associated with influenza, by using data mining and bioinformatics. Our in vitro findings indicated that TE extract exerted protective properties against the influenza A virus. We speculated that lutein, as a key active component in TE extract, is largely responsible for its antiviral effects. Therefore, we suggest TE extract as an alternative in the treatment of influenza.


Sujet(s)
Antiviraux , Biologie informatique , Simulation de docking moléculaire , Extraits de plantes , Cartes d'interactions protéiques , Tagetes , Antiviraux/pharmacologie , Antiviraux/composition chimique , Extraits de plantes/pharmacologie , Extraits de plantes/composition chimique , Biologie informatique/méthodes , Cartes d'interactions protéiques/effets des médicaments et des substances chimiques , Humains , Tagetes/composition chimique , Virus de la grippe A/effets des médicaments et des substances chimiques , Virus de la grippe A/génétique , Grippe humaine/traitement médicamenteux , Grippe humaine/virologie , Animaux , Cellules rénales canines Madin-Darby , Chiens , Médecine traditionnelle chinoise/méthodes
5.
Proc Natl Acad Sci U S A ; 121(31): e2320303121, 2024 Jul 30.
Article de Anglais | MEDLINE | ID: mdl-39008691

RÉSUMÉ

Influenza viruses pose a significant burden on global human health. Influenza has a broad cellular tropism in the airway, but how infection of different epithelial cell types impacts replication kinetics and burden in the airways is not fully understood. Using primary human airway cultures, which recapitulate the diverse epithelial cell landscape of the human airways, we investigated the impact of cell type composition on virus tropism and replication kinetics. Cultures were highly diverse across multiple donors and 30 independent differentiation conditions and supported a range of influenza replication. Although many cell types were susceptible to influenza, ciliated and secretory cells were predominantly infected. Despite the strong tropism preference for secretory and ciliated cells, which consistently make up 75% or more of infected cells, only ciliated cells were associated with increased virus production. Surprisingly, infected secretory cells were associated with overall reduced virus output. The disparate response and contribution to influenza virus production could be due to different pro- and antiviral interferon-stimulated gene signatures between ciliated and secretory populations, which were interrogated with single-cell RNA sequencing. These data highlight the heterogeneous outcomes of influenza virus infections in the complex cellular environment of the human airway and the disparate impacts of infected cell identity on multiround burst size, even among preferentially infected cell types.


Sujet(s)
Cellules épithéliales , Grippe humaine , Tropisme viral , Réplication virale , Humains , Grippe humaine/virologie , Réplication virale/physiologie , Cellules épithéliales/virologie , Cellules épithéliales/métabolisme , Cils vibratiles/virologie , Cils vibratiles/métabolisme , Cellules cultivées , Muqueuse respiratoire/virologie , Muqueuse respiratoire/cytologie
6.
Curr Microbiol ; 81(9): 267, 2024 Jul 14.
Article de Anglais | MEDLINE | ID: mdl-39003673

RÉSUMÉ

In this study, we evaluated the impact of human gut microbiota on the immune pathways in the respiratory tract using a gnotobiotic (Gn) piglet model. We humanized piglets with rural and urban infant fecal microbiota (RIFM and UIFM, respectively) and then infected them with a H1N1 swine influenza virus. We analyzed the microbial diversity and structure of the intestinal and respiratory tracts of the piglets before and after the influenza virus infection and measured the viral load and immune responses. We found that the viral load in the upper respiratory tract of UIFM transplanted piglets was higher than their rural cohorts (RIFM), while virus-specific antibody responses were comparable. The relative cytokine gene expression in the tracheobronchial (respiratory tract) and mesenteric (gastrointestinal) lymph nodes, lungs, blood, and spleen of RIFM and UIFM piglets revealed a trend in reciprocal regulation of proinflammatory, innate, and adaptive immune-associated cytokines as well as the frequency of T-helper/memory cells, cytotoxic T cells, and myeloid immune cell subsets. We also observed different phylum-level shifts of the fecal microbiota in response to influenza virus infection between the two piglet groups, suggesting the potential impact of the gut microbiota on the immune responses to influenza virus infection and lung microbiota. In conclusion, Gn piglets humanized with diverse infant fecal microbiota had differential immune regulation, with UIFM favoring the activation of proinflammatory immune mediators following an influenza virus infection compared to their rural RIFM cohorts. Furthermore, Gn piglets can be a useful model in investigating the impact of diverse human microbiota of the gastrointestinal tract, probably also the respiratory tract, on respiratory health and testing specific probiotic- or prebiotic-based therapeutics.


Sujet(s)
Cytokines , Modèles animaux de maladie humaine , Fèces , Microbiome gastro-intestinal , Axénie , Immunité muqueuse , Sous-type H1N1 du virus de la grippe A , Animaux , Suidae , Fèces/microbiologie , Fèces/virologie , Humains , Sous-type H1N1 du virus de la grippe A/immunologie , Cytokines/métabolisme , Infections à Orthomyxoviridae/immunologie , Infections à Orthomyxoviridae/virologie , Charge virale , Nourrisson , Grippe humaine/immunologie , Grippe humaine/microbiologie , Grippe humaine/virologie
7.
PLoS Pathog ; 20(7): e1012257, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38950082

RÉSUMÉ

An important aspect of how viruses spread and infect is the viral burst size, or the number of new viruses produced by each infected cell. Surprisingly, this value remains poorly characterized for influenza A virus (IAV), commonly known as the flu. In this study, we screened tens of thousands of cells using a microfluidic method called droplet quantitative PCR (dqPCR). The high-throughput capability of dqPCR enabled the measurement of a large population of infected cells producing progeny virus. By measuring the fully assembled and successfully released viruses from these infected cells, we discover that the viral burst sizes for both the seasonal H3N2 and the 2009 pandemic H1N1 strains vary significantly, with H3N2 ranging from 101 to 104 viruses per cell, and H1N1 ranging from 101 to 103 viruses per cell. Some infected cells produce average numbers of new viruses, while others generate extensive number of viruses. In fact, we find that only 10% of the single-cell infections are responsible for creating a significant portion of all the viruses. This small fraction produced approximately 60% of new viruses for H3N2 and 40% for H1N1. On average, each infected cell of the H3N2 flu strain produced 709 new viruses, whereas for H1N1, each infected cell produced 358 viruses. This novel method reveals insights into the flu virus and can lead to improved strategies for managing and preventing the spread of viruses.


Sujet(s)
Sous-type H1N1 du virus de la grippe A , Sous-type H3N2 du virus de la grippe A , Grippe humaine , Humains , Sous-type H1N1 du virus de la grippe A/génétique , Sous-type H3N2 du virus de la grippe A/génétique , Grippe humaine/virologie , Réaction de polymérisation en chaine en temps réel/méthodes , Analyse sur cellule unique/méthodes , Animaux , Cellules rénales canines Madin-Darby , Virus de la grippe A/génétique , Chiens , Réplication virale
8.
Front Cell Infect Microbiol ; 14: 1433661, 2024.
Article de Anglais | MEDLINE | ID: mdl-38979510

RÉSUMÉ

In recent years, the avian influenza virus has emerged as a significant threat to both human and public health. This study focuses on a patient infected with the H10N3 subtype of avian influenza virus, admitted to the Third People's Hospital of Kunming City on March 6, 2024. Metagenomic RNA sequencing and polymerase chain reaction (PCR) analysis were conducted on the patient's sputum, confirming the H10N3 infection. The patient presented severe pneumonia symptoms such as fever, expectoration, chest tightness, shortness of breath, and cough. Phylogenetic analysis of the Haemagglutinin (HA) and neuraminidase (NA) genes of the virus showed that the virus was most closely related to a case of human infection with the H10N3 subtype of avian influenza virus found in Zhejiang Province, China. Analysis of amino acid mutation sites identified four mutations potentially hazardous to human health. Consequently, this underscores the importance of continuous and vigilant monitoring of the dynamics surrounding the H10N3 subtype of avian influenza virus, utilizing advanced genomic surveillance techniques.


Sujet(s)
Glycoprotéine hémagglutinine du virus influenza , Virus de la grippe A , Grippe humaine , Sialidase , Phylogenèse , Humains , Chine/épidémiologie , Grippe humaine/virologie , Sialidase/génétique , Glycoprotéine hémagglutinine du virus influenza/génétique , Virus de la grippe A/génétique , Virus de la grippe A/classification , Virus de la grippe A/isolement et purification , Mutation , Analyse de mutations d'ADN , Animaux , Grippe chez les oiseaux/virologie , Protéines virales/génétique , Expectoration/virologie , Oiseaux/virologie , Mâle , ARN viral/génétique
9.
Emerg Microbes Infect ; 13(1): 2368202, 2024 Dec.
Article de Anglais | MEDLINE | ID: mdl-38970562

RÉSUMÉ

Influenza A viruses (IAV) impose significant respiratory disease burdens in both swine and humans worldwide, with frequent human-to-swine transmission driving viral evolution in pigs and highlighting the risk at the animal-human interface. Therefore, a comprehensive One Health approach (interconnection among human, animal, and environmental health) is needed for IAV prevention, control, and response. Animal influenza genomic surveillance remains limited in many Latin American countries, including Colombia. To address this gap, we genetically characterized 170 swine specimens from Colombia (2011-2017). Whole genome sequencing revealed a predominance of pandemic-like H1N1 lineage, with a minority belonging to H3N2 and H1N2 human seasonal-like lineage and H1N1 early classical swine lineages. Significantly, we have identified reassortant and recombinant viruses (H3N2, H1N1) not previously reported in Colombia. This suggests a broad genotypic viral diversity, likely resulting from reassortment between classical endemic viruses and new introductions established in Colombia's swine population (e.g. the 2009 H1N1 pandemic). Our study highlights the importance of a One Health approach in disease control, particularly in an ecosystem where humans are a main source of IAV to swine populations, and emphasizes the need for continued surveillance and enhanced biosecurity measures. The co-circulation of multiple subtypes in regions with high swine density facilitates viral exchange, underscoring the importance of monitoring viral evolution to inform vaccine selection and public health policies locally and globally.


Sujet(s)
Évolution moléculaire , Variation génétique , Sous-type H1N1 du virus de la grippe A , Sous-type H3N2 du virus de la grippe A , Infections à Orthomyxoviridae , Phylogenèse , Maladies des porcs , Animaux , Suidae , Colombie/épidémiologie , Infections à Orthomyxoviridae/virologie , Infections à Orthomyxoviridae/médecine vétérinaire , Infections à Orthomyxoviridae/épidémiologie , Maladies des porcs/virologie , Maladies des porcs/épidémiologie , Sous-type H3N2 du virus de la grippe A/génétique , Sous-type H3N2 du virus de la grippe A/classification , Sous-type H3N2 du virus de la grippe A/isolement et purification , Sous-type H1N1 du virus de la grippe A/génétique , Sous-type H1N1 du virus de la grippe A/classification , Sous-type H1N1 du virus de la grippe A/isolement et purification , Une seule santé , Humains , Virus de la grippe A/génétique , Virus de la grippe A/classification , Virus de la grippe A/isolement et purification , Séquençage du génome entier , Génome viral , Surveillance épidémiologique , Virus recombinants/génétique , Virus recombinants/classification , Virus recombinants/isolement et purification , Sous-type H1N2 du virus de la grippe A/génétique , Sous-type H1N2 du virus de la grippe A/isolement et purification , Sous-type H1N2 du virus de la grippe A/classification , Grippe humaine/virologie , Grippe humaine/épidémiologie
10.
Cell Host Microbe ; 32(7): 1043-1045, 2024 Jul 10.
Article de Anglais | MEDLINE | ID: mdl-38991500

RÉSUMÉ

In this issue of Cell Host & Microbe, Karakus et al. find that an influenza virus enters cells by exclusively binding to a protein instead of sugars.


Sujet(s)
Grippe humaine , Pénétration virale , Humains , Grippe humaine/virologie , Virus de la grippe A/physiologie , Animaux , Orthomyxoviridae/physiologie
12.
Sci Rep ; 14(1): 15853, 2024 Jul 09.
Article de Anglais | MEDLINE | ID: mdl-38982082

RÉSUMÉ

Influenza (Flu) is a severe health, medical, and economic problem, but no medication that has excellent outcomes and lowers the occurrence of these problems is now available. GanghuoQingwenGranules (GHQWG) is a common Chinese herbal formula for the treatment of influenza (flu). However, its methods of action remain unknown. We used network pharmacology, molecular docking, and molecular dynamics simulation techniques to investigate the pharmacological mechanism of GHQWG in flu. TCMSP and various types of literature were used to obtain active molecules and targets of GHQWG. Flu-related targets were found in the Online Mendelian Inheritance in Man (OMIM) database, the DisFeNET database, the Therapeutic Target Database (TTD), and the DrugBank database. To screen the key targets, a protein-protein interaction (PPI) network was constructed. DAVID was used to analyze GO and KEGG pathway enrichment. Target tissue and organ distribution was assessed. Molecular docking was used to evaluate interactions between possible targets and active molecules. For the ideal core protein-compound complexes obtained using molecular docking, a molecular dynamics simulation was performed. In total, 90 active molecules and 312 GHQWG targets were discovered. The PPI network's topology highlighted six key targets. GHQWG's effects are mediated via genes involved in inflammation, apoptosis, and oxidative stress, as well as the TNF and IL-17 signaling pathways, according to GO and KEGG pathway enrichment analysis. Molecular docking and molecular dynamics simulations demonstrated that the active compounds and tested targets had strong binding capabilities. This analysis accurately predicts the effective components, possible targets, and pathways involved in GHQWG flu treatment. We proposed a novel study strategy for future studies on the molecular processes of GHQWG in flu treatment. Furthermore, the possible active components provide a dependable source for flu drug screening.


Sujet(s)
Médicaments issus de plantes chinoises , Grippe humaine , Simulation de docking moléculaire , Simulation de dynamique moléculaire , Pharmacologie des réseaux , Cartes d'interactions protéiques , Humains , Médicaments issus de plantes chinoises/composition chimique , Médicaments issus de plantes chinoises/pharmacologie , Médicaments issus de plantes chinoises/usage thérapeutique , Grippe humaine/traitement médicamenteux , Grippe humaine/virologie , Cartes d'interactions protéiques/effets des médicaments et des substances chimiques , Antiviraux/pharmacologie , Antiviraux/composition chimique , Antiviraux/usage thérapeutique
13.
Environ Microbiol Rep ; 16(4): e13303, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-38982659

RÉSUMÉ

The development of effective methods for the surveillance of seasonal respiratory viruses is required for the timely management of outbreaks. We aimed to survey Influenza-A, Influenza-B, RSV-A, Rhinovirus and SARS-CoV-2 surveillance in a tertiary hospital and a campus over 5 months. The effectiveness of air screening as an early warning system for respiratory viruses was evaluated in correlation with respiratory tract panel test results. The overall viral positivity was higher on the campus than in the hospital (55.0% vs. 38.0%). Influenza A was the most prevalent pathogen in both locations. There were two influenza peaks (42nd and 49th weeks) in the hospital air, and a delayed peak was detected on campus in the 1st-week of January. Panel tests indicated a high rate of Influenza A in late December. RSV-A-positivity was higher on the campus than the hospital (21.6% vs. 7.4%). Moreover, we detected two RSV-A peaks in the campus air (48th and 51st weeks) but only one peak in the hospital and panel tests (week 49). Although rhinovirus was the most common pathogen in panel tests, rhinovirus positivity was low in air samples. The air screening for Influenza-B and SARS-Cov-2 revealed comparable positivity rates with panel tests. Air screening can be integrated into surveillance programs to support infection control programs for potential epidemics of respiratory virus infections except for rhinoviruses.


Sujet(s)
COVID-19 , Rhinovirus , SARS-CoV-2 , Humains , Rhinovirus/isolement et purification , SARS-CoV-2/isolement et purification , SARS-CoV-2/génétique , COVID-19/épidémiologie , COVID-19/diagnostic , COVID-19/virologie , Aérosols/analyse , Infections de l'appareil respiratoire/virologie , Infections de l'appareil respiratoire/épidémiologie , Infections de l'appareil respiratoire/diagnostic , Microbiologie de l'air , Grippe humaine/épidémiologie , Grippe humaine/virologie , Pollution de l'air intérieur/analyse , Virus de la grippe A/isolement et purification , Saisons , Épidémies , Surveillance de l'environnement/méthodes , Virus influenza B/isolement et purification , Virus/isolement et purification , Virus/classification , Virus/génétique
14.
PLoS One ; 19(7): e0301664, 2024.
Article de Anglais | MEDLINE | ID: mdl-38985719

RÉSUMÉ

Influenza viruses constitute a major threat to human health globally. The viral surface glycoprotein hemagglutinin (HA) is the immunodominant antigen, contains the site for binding to the cellular receptor (RBS), and it is the major target of neutralizing antibody responses post-infection. We developed llama-derived single chain antibody fragments (VHHs) specific for type A influenza virus. Four VHHs were identified and further characterized. VHH D81 bound residues in the proximity of the C-terminal region of HA1 of H1 and H5 subtypes, and showed weak neutralizing activity, whereas VHH B33 bound residues in the proximity of the N-terminal region of the HA's stem domain (HA2) of H1, H5, and H9 subtypes, and showed no neutralizing activity. Of most relevance, VHHs E13 and G41 recognized highly conserved conformational epitopes on the H1 HA's globular domain (HA1) and showed high virus neutralizing activity (ranging between 0.94 to 0.01µM), when tested against several human H1N1 isolates. Additionally, E13 displayed abrogated virus replication of a panel of H1N1 strains spanning over 80 years of antigenic drift and isolated from human, avian, and swine origin. Interestingly, E13 conferred protection in vivo at a dose as low as 0.05 mg/kg. Mice treated with E13 intranasally resulted in undetectable virus challenge loads in the lungs at day 4 post-challenge. The transfer of sterilizing pan-H1 immunity, by a dose in the range of micrograms given intranasally, is of major significance for a monomeric VHH and supports the further development of E13 as an immunotherapeutic agent for the mitigation of influenza infections.


Sujet(s)
Anticorps neutralisants , Camélidés du Nouveau Monde , Glycoprotéine hémagglutinine du virus influenza , Sous-type H1N1 du virus de la grippe A , Infections à Orthomyxoviridae , Anticorps à domaine unique , Animaux , Glycoprotéine hémagglutinine du virus influenza/immunologie , Humains , Sous-type H1N1 du virus de la grippe A/immunologie , Anticorps à domaine unique/immunologie , Anticorps neutralisants/immunologie , Souris , Infections à Orthomyxoviridae/immunologie , Infections à Orthomyxoviridae/prévention et contrôle , Infections à Orthomyxoviridae/virologie , Camélidés du Nouveau Monde/immunologie , Anticorps antiviraux/immunologie , Femelle , Grippe humaine/immunologie , Grippe humaine/prévention et contrôle , Grippe humaine/virologie , Épitopes/immunologie , Chiens , Souris de lignée BALB C
15.
Front Cell Infect Microbiol ; 14: 1399782, 2024.
Article de Anglais | MEDLINE | ID: mdl-39027137

RÉSUMÉ

Background: Accurate detection of influenza virus in clinical samples requires correct execution of all aspects of the detection test. If the viral load in a sample is below the detection limit, a false negative result may be obtained. To overcome this issue, we developed a modified transport medium (MTM) for clinical sample transportation to increase viral detection sensitivity. Method: We first validated the MTM using laboratory-stocked influenza A viruses (IAVs: H1N1, H3N2, H7N3, H9N2) and influenza B viruses (IBVs: Yamagata, Victoria). We also tested clinical samples. A total of 110 patients were enrolled and a pair of samples were collected to determine the sensitivity of real-time polymerase chain reaction (RT-PCR) following MTM treatment. Result: After 24 h culturing in MTM, the viral loads were increased, represented by a 10-fold increase in detection sensitivity for H1N1, H9N2, and IBVs, a 100-fold increase for H3N2, and a 1,000-fold increase for H7N3. We further tested the effects of MTM on 19 IAV and 11 IBV stored clinical samples. The RT-PCR results showed that the positive detection rate of IAV samples increased from 63.16% (12/19) without MTM culturing to 78.95% (15/19) after 48 h culturing, and finally 89.47% (17/19) after 72 h culturing. MTM treatment of IBV clinical samples also increased the positive detection rate from 36.36% (4/11, 0 h) to 63.64% (7/11, 48 h) to 72.73% (8/11, 72 h). For clinical samples detected by RT-PCR, MTM outperformed other transport mediums in terms of viral detection rate (11.81% increase, P=0.007). Conclusion: Our results demonstrated that the use of MTM for clinical applications can increase detection sensitivity, thus facilitating the accurate diagnosis of influenza infection.


Sujet(s)
Virus de la grippe A , Virus influenza B , Grippe humaine , Sensibilité et spécificité , Manipulation d'échantillons , Charge virale , Humains , Grippe humaine/diagnostic , Grippe humaine/virologie , Virus de la grippe A/isolement et purification , Virus de la grippe A/génétique , Virus influenza B/isolement et purification , Virus influenza B/génétique , Manipulation d'échantillons/méthodes , Réaction de polymérisation en chaine en temps réel/méthodes , Milieux de culture/composition chimique , Adulte d'âge moyen , Femelle , Adulte , Mâle
16.
Arch Virol ; 169(8): 164, 2024 Jul 11.
Article de Anglais | MEDLINE | ID: mdl-38990242

RÉSUMÉ

Upregulation of ADAMTS-4 has been reported to have an important role in lung injury, and ADAMTS-4 expression is regulated by miR-126a-5p in abdominal aortic aneurysms. The aim of this study was to investigate whether miR-126a-5p/ADAMTS-4 plays a role in influenza-virus-induced lung injury. Lung fibroblasts were infected with H1N1 influenza virus to detect changes in miR-126a-5p and ADAMTS-4 expression, and cell viability was measured by CCK-8 assay. Inflammatory factors and matrix protease levels were examined using ELISA kits, and cell apoptosis was assessed by measuring the levels of apoptosis-related proteins. A dual luciferase assay was used to verify the regulatory relationship between miR-126a-5p and ADAMTS-4. H1N1 influenza virus reduced fibroblast viability, inhibited miR-126a-5p expression, and promoted ADAMTS-4 expression. Overexpression of miR-126a-5p attenuated the cellular inflammatory response, apoptosis, matrix protease secretion, and virus replication. Luciferase reporter assays revealed that miR-126a-5p inhibited ADAMTS-4 expression by targeting ADAMTS-4 mRNA. Further experiments showed that overexpression of ADAMTS-4 significantly reversed the inhibitory effects of miR-126a-5p on fibroblast inflammation, apoptosis, matrix protease secretion, and virus replication. Upregulation of miR-126a-5p inhibits H1N1-induced apoptosis, inflammatory factors, and matrix protease secretion, as well as virus replication in lung fibroblasts.


Sujet(s)
Protéine ADAMTS4 , Apoptose , Fibroblastes , Inflammation , Sous-type H1N1 du virus de la grippe A , Poumon , microARN , microARN/génétique , microARN/métabolisme , Fibroblastes/virologie , Fibroblastes/métabolisme , Humains , Poumon/virologie , Poumon/anatomopathologie , Protéine ADAMTS4/génétique , Protéine ADAMTS4/métabolisme , Sous-type H1N1 du virus de la grippe A/génétique , Sous-type H1N1 du virus de la grippe A/physiologie , Inflammation/génétique , Survie cellulaire , Réplication virale , Grippe humaine/virologie , Grippe humaine/génétique , Grippe humaine/métabolisme , Lignée cellulaire
17.
Virology ; 597: 110162, 2024 Sep.
Article de Anglais | MEDLINE | ID: mdl-38955082

RÉSUMÉ

There is an urgent need for influenza vaccines that offer broad cross-protection. The highly conserved ectodomain of the influenza matrix protein 2 (M2e) is a promising candidate; however, its low immunogenicity can be addressed. In this study, we developed influenza vaccines using the Lumazine synthase (LS) platform. The primary objective of this study was to determine the protective potential of M2e proteins expressed on Lumazine synthase (LS) nanoparticles. M2e-LS proteins, produced through the E. coli system, spontaneously assemble into nanoparticles. The study investigated the efficacy of the M2e-LS nanoparticle vaccine in mice. Mice immunized with M2e-LS nanoparticles exhibited significantly higher levels of intracellular cytokines than those receiving soluble M2e proteins. The M2e-LS protein exhibited robust immunogenicity and provided 100% protection against cross-clade influenza.


Sujet(s)
Sous-type H1N1 du virus de la grippe A , Vaccins antigrippaux , Complexes multienzymatiques , Nanoparticules , Infections à Orthomyxoviridae , Protéines de la matrice virale , Animaux , Vaccins antigrippaux/immunologie , Vaccins antigrippaux/administration et posologie , Sous-type H1N1 du virus de la grippe A/immunologie , Nanoparticules/composition chimique , Protéines de la matrice virale/immunologie , Protéines de la matrice virale/génétique , Protéines de la matrice virale/métabolisme , Souris , Infections à Orthomyxoviridae/prévention et contrôle , Infections à Orthomyxoviridae/immunologie , Infections à Orthomyxoviridae/virologie , Complexes multienzymatiques/immunologie , Complexes multienzymatiques/métabolisme , Femelle , Souris de lignée BALB C , Anticorps antiviraux/immunologie , Cytokines/métabolisme , Protection croisée/immunologie , Grippe humaine/prévention et contrôle , Grippe humaine/immunologie , Grippe humaine/virologie , Escherichia coli/génétique , Escherichia coli/métabolisme , Protéines viroporines
18.
PLoS Pathog ; 20(7): e1012345, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38968329

RÉSUMÉ

The CRISPR-Cas13 system has been proposed as an alternative treatment of viral infections. However, for this approach to be adopted as an antiviral, it must be optimized until levels of efficacy rival or exceed the performance of conventional approaches. To take steps toward this goal, we evaluated the influenza viral RNA degradation patterns resulting from the binding and enzymatic activity of mRNA-encoded LbuCas13a and two crRNAs from a prior study, targeting PB2 genomic and messenger RNA. We found that the genome targeting guide has the potential for significantly higher potency than originally detected, because degradation of the genomic RNA is not uniform across the PB2 segment, but it is augmented in proximity to the Cas13 binding site. The PB2 genome targeting guide exhibited high levels (>1 log) of RNA degradation when delivered 24 hours post-infection in vitro and maintained that level of degradation over time, with increasing multiplicity of infection (MOI), and across modern influenza H1N1 and H3N2 strains. Chemical modifications to guides with potent LbuCas13a function, resulted in nebulizer delivered efficacy (>1-2 log reduction in viral titer) in a hamster model of influenza (Influenza A/H1N1/California/04/09) infection given prophylactically or as a treatment (post-infection). Maximum efficacy was achieved with two doses, when administered both pre- and post-infection. This work provides evidence that mRNA-encoded Cas13a can effectively mitigate Influenza A infections opening the door to the development of a programmable approach to treating multiple respiratory infections.


Sujet(s)
Systèmes CRISPR-Cas , Grippe humaine , Stabilité de l'ARN , ARN messager , ARN viral , Animaux , ARN viral/génétique , ARN viral/métabolisme , ARN messager/génétique , ARN messager/métabolisme , Humains , Grippe humaine/virologie , Sous-type H1N1 du virus de la grippe A/génétique , Sous-type H3N2 du virus de la grippe A/génétique , Infections à Orthomyxoviridae/virologie , Antiviraux/pharmacologie , Chiens , Cricetinae , Protéines virales/génétique , Protéines virales/métabolisme , Mesocricetus , Cellules rénales canines Madin-Darby
19.
Viruses ; 16(6)2024 May 22.
Article de Anglais | MEDLINE | ID: mdl-38932115

RÉSUMÉ

In this study, we investigated the concentration of airborne influenza virus in daycare centers and influencing factors, such as common cold prevalence, air pollutants, and meteorological factors. A total of 209 air samples were collected from daycare centers in Kaohsiung and the influenza virus was analyzed using real-time quantitative polymerase chain reaction. Air pollutants and metrological factors were measured using real-time monitoring equipment. Winter had the highest positive rates of airborne influenza virus and the highest prevalence of the common cold, followed by summer and autumn. The concentration of CO was significantly positively correlated with airborne influenza virus. Daycare center A, with natural ventilation and air condition systems, had a higher concentration of airborne influenza A virus, airborne fungi, and airborne bacteria, as well as a higher prevalence of the common cold, than daycare center B, with a mechanical ventilation system and air purifiers, while the concentrations of CO2, CO, and UFPs in daycare center A were lower than those in daycare center B. We successfully detected airborne influenza virus in daycare centers, demonstrating that aerosol sampling for influenza can provide novel epidemiological insights and inform the management of influenza in daycare centers.


Sujet(s)
Microbiologie de l'air , Garderies d'enfants , Grippe humaine , Saisons , Humains , Grippe humaine/épidémiologie , Grippe humaine/virologie , Grippe humaine/transmission , Virus de la grippe A/isolement et purification , Virus de la grippe A/génétique , Orthomyxoviridae/isolement et purification , Orthomyxoviridae/génétique , Polluants atmosphériques/analyse , Rhume banal/épidémiologie , Rhume banal/virologie , Rhume banal/transmission , Enfant d'âge préscolaire , Prévalence , Surveillance de l'environnement
20.
Viruses ; 16(6)2024 May 24.
Article de Anglais | MEDLINE | ID: mdl-38932131

RÉSUMÉ

In humans, females of reproductive age often experience a more severe disease during influenza A virus infection, which may be due to differences in their innate immune response. Sex-specific outcomes to influenza infection have been recapitulated in mice, enabling researchers to study viral and immune dynamics in vivo in order to identify immune mechanisms that are differently regulated between the sexes. This study is based on the hypothesis that sex-specific outcomes emerge due to differences in the rates/speeds that select immune components respond. Using publicly available sex-specific murine data, we utilized dynamic mathematical models of the innate immune response to identify candidate mechanisms that may lead to increased disease severity in female mice. We implemented a large computational screen using the Bayesian information criterion (BIC), wherein the goodness of fit of the competing model scenarios is balanced against complexity (i.e., the number of parameters). Our results suggest that having sex-specific rates for proinflammatory monocyte induction by interferon and monocyte inhibition of virus replication provides the simplest (lowest BIC) explanation for the difference observed in the male and female immune responses. Markov-chain Monte Carlo (MCMC) analysis and global sensitivity analysis of the top performing scenario were performed to provide rigorous estimates of the sex-specific parameter distributions and to provide insight into which parameters most affect innate immune responses. Simulations using the top-performing model suggest that monocyte activity could be a key target to reduce influenza disease severity in females. Overall, our Bayesian statistical and dynamic modeling approach suggests that monocyte activity and induction parameters are sex-specific and may explain sex-differences in influenza disease immune dynamics.


Sujet(s)
Théorème de Bayes , Immunité innée , Monocytes , Infections à Orthomyxoviridae , Femelle , Animaux , Souris , Monocytes/immunologie , Infections à Orthomyxoviridae/immunologie , Infections à Orthomyxoviridae/virologie , Mâle , Virus de la grippe A/immunologie , Grippe humaine/immunologie , Grippe humaine/virologie , Modèles théoriques , Humains , Facteurs sexuels , Réplication virale
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