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1.
Biol Open ; 13(9)2024 Sep 15.
Article de Anglais | MEDLINE | ID: mdl-39225039

RÉSUMÉ

Here, we introduce 'TICIT', targeted integration by CRISPR-Cas9 and integrase technologies, which utilizes the site-specific DNA recombinase - phiC31 integrase - to insert large DNA fragments into CRISPR-Cas9 target loci. This technique, which relies on first knocking in a 39-basepair phiC31 landing site via CRISPR-Cas9, enables researchers to repeatedly perform site-specific transgenesis at the exact genomic location with high precision and efficiency. We applied this approach to devise a method for the instantaneous determination of a zebrafish's genotype simply by examining its color. When a zebrafish mutant line must be propagated as heterozygotes due to homozygous lethality, employing this method allows facile identification of a population of homozygous mutant embryos even before the mutant phenotypes manifest. Thus, it should facilitate various downstream applications, such as large-scale chemical screens. We demonstrated that TICIT could also create reporter fish driven by an endogenous promoter. Further, we identified a landing site in the tyrosinase gene that could support transgene expression in a broad spectrum of tissue and cell types. In sum, TICIT enables site-specific DNA integration without requiring complex donor DNA construction. It can yield consistent transgene expression, facilitate diverse applications in zebrafish, and may be applicable to cells in culture and other model organisms.


Sujet(s)
Systèmes CRISPR-Cas , Génotype , Integrases , Danio zébré , Integrases/génétique , Integrases/métabolisme , Animaux , Danio zébré/génétique , Techniques de transfert de gènes , Techniques de génotypage , Transgènes , Gènes rapporteurs , Édition de gène/méthodes , Animal génétiquement modifié
2.
ACS Synth Biol ; 13(9): 3022-3031, 2024 Sep 20.
Article de Anglais | MEDLINE | ID: mdl-39238421

RÉSUMÉ

Genome integration enables host organisms to stably carry heterologous DNA messages, introducing new genotypes and phenotypes for expanded applications. While several genome integration approaches have been reported, a scalable tool for DNA message storage within site-specific genome landing pads is still lacking. Here, we introduce an iterative genome integration method utilizing orthogonal serine integrases, enabling the stable storage of multiple heterologous genes in the chromosome of Escherichia coli MG1655. By leveraging serine integrases TP901-1, Bxb1, and PhiC31, along with engineered integration vectors, we demonstrate high-efficiency, marker-free integration of DNA fragments up to 13 kb in length. To further simplify the procedure, we then develop a streamlined integration method and showcase the system's versatility by constructing an engineered E. coli strain capable of storing and expressing multiple genes from diverse species. Additionally, we illustrate the potential utility of these engineered strains for synthetic biology applications, including in vivo and in vitro protein expression. Our work extends the application scope of serine integrases for scalable gene integration cascades, with implications for genome manipulation and gene storage applications in synthetic biology.


Sujet(s)
Escherichia coli , Génome bactérien , Integrases , Escherichia coli/génétique , Génome bactérien/génétique , Integrases/génétique , Integrases/métabolisme , Biologie synthétique/méthodes , Sérine/métabolisme , Sérine/génétique , Génie génétique/méthodes , Vecteurs génétiques/génétique
3.
Sci Transl Med ; 16(759): eadi4830, 2024 Aug 07.
Article de Anglais | MEDLINE | ID: mdl-39110781

RÉSUMÉ

Effective intracellular delivery of therapeutic proteins can potentially treat a wide array of diseases. However, efficient delivery of functional proteins across the cell membrane remains challenging. Exosomes are nanosized vesicles naturally secreted by various types of cells and may serve as promising nanocarriers for therapeutic biomolecules. Here, we engineered exosomes equipped with a photoinducible cargo protein release system, termed mMaple3-mediated protein loading into and release from exosome (MAPLEX), in which cargo proteins can be loaded into the exosomes by fusing them with photocleavable protein (mMaple3)-conjugated exosomal membrane markers and subsequently released from the exosomal membrane by inducing photocleavage with blue light illumination. Using this system, we first induced transcriptional regulation by delivering octamer-binding transcription factor 4 and SRY-box transcription factor 2 to fibroblasts in vitro. Second, we induced in vivo gene recombination in Cre reporter mice by delivering Cre recombinase. Last, we achieved targeted epigenome editing in the brains of 5xFAD and 3xTg-AD mice, two models of Alzheimer's disease. Administration of MAPLEXs loaded with ß-site amyloid precursor protein cleaving enzyme 1 (Bace1)-targeting single guide RNA-incorporated dCas9 ribonucleoprotein complexes, coupled with the catalytic domain of DNA methyltransferase 3A, resulted in successful methylation of the targeted CpG sites within the Bace1 promoter. This approach led to a significant reduction in Bace1 expression, improved recognition memory impairment, and reduced amyloid pathology in 5xFAD and 3xTg-AD mice. These results suggest that MAPLEX is an efficient intracellular protein delivery system that can deliver diverse therapeutic proteins for multiple diseases.


Sujet(s)
Maladie d'Alzheimer , Systèmes CRISPR-Cas , Exosomes , Édition de gène , Exosomes/métabolisme , Animaux , Maladie d'Alzheimer/génétique , Maladie d'Alzheimer/thérapie , Maladie d'Alzheimer/anatomopathologie , Maladie d'Alzheimer/métabolisme , Systèmes CRISPR-Cas/génétique , Édition de gène/méthodes , Humains , Souris , Épigenèse génétique , Systèmes de délivrance de médicaments , Amyloid precursor protein secretases/métabolisme , Peptides bêta-amyloïdes/métabolisme , Modèles animaux de maladie humaine , Integrases/métabolisme
4.
Parasit Vectors ; 17(1): 352, 2024 Aug 21.
Article de Anglais | MEDLINE | ID: mdl-39169430

RÉSUMÉ

BACKGROUND: The dimerizable Cre recombinase system (DiCre) exhibits increased leaky activity in Cryptosporidium, leading to unintended gene editing in the absence of induction. Therefore, optimization of the current DiCre technique is necessary for functional studies of essential Cryptosporidium genes. METHODS: Based on the results of transcriptomic analysis of Cryptosporidium parvum stages, seven promoters with different transcriptional capabilities were screened to drive the expression of Cre fragments (FKBP-Cre59 and FRB-Cre60). Transient transfection was performed to assess the effect of promoter strength on leakage activity. In vitro and in vivo experiments were performed to evaluate the leaky activity and cleavage efficiency of the optimized DiCre system by polymerase chain reaction (PCR), nanoluciferase, and fluorescence analyses. RESULTS: The use of promoters with lower transcriptional activity, such as pcgd6_4110 and pcgd3_260, as opposed to strong promoters such as pActin, pα-Tubulin, and pEnolase, reduced the leakage rate of the system from 35-75% to nearly undetectable levels, as verified by transient transfection. Subsequent in vitro and in vivo experiments using stable lines further demonstrated that the optimized DiCre system had no detectable leaky activity. The system achieved 71% cleavage efficiency in vitro. In mice, a single dose of the inducer resulted in a 10% conditional gene knockout and fluorescent protein expression in oocysts. These fluorescently tagged transgenic oocysts could be enriched by flow sorting for further infection studies. CONCLUSIONS: A DiCre conditional gene knockout system for Cryptosporidium with good cleavage efficiency and reduced leaky activity has been successfully established.


Sujet(s)
Cryptosporidium parvum , Édition de gène , Integrases , Régions promotrices (génétique) , Édition de gène/méthodes , Animaux , Souris , Integrases/génétique , Integrases/métabolisme , Cryptosporidium parvum/génétique , Cryptosporidium parvum/enzymologie , Cryptosporidiose/parasitologie , Cryptosporidium/génétique
5.
Mol Metab ; 88: 101999, 2024 Oct.
Article de Anglais | MEDLINE | ID: mdl-39094948

RÉSUMÉ

OBJECTIVE: Recombinant adeno-associated virus (rAAV) vectors are powerful tools for the sustained expression of proteins in vivo and have been successfully used for mechanistic studies in mice. A major challenge associated with this method is to obtain tissue specificity and high expression levels without need of local virus administration. METHODS: To achieve this goal for brown adipose tissue (BAT), we developed a rAAV vector for intravenous bolus injection, which includes an expression cassette comprising an uncoupling protein-1 enhancer-promoter for transcription in brown adipocytes and miR122 target sequences for suppression of expression in the liver, combined with packaging in serotype Rec2 capsid protein. To test tissue specificity, we used a version of this vector expressing Cre recombinase to transduce mice with floxed alleles to knock out MLXIPL (ChREBP) or tdTomato-Cre reporter mice. RESULTS: We demonstrated efficient Cre-dependent recombination in interscapular BAT and variable effects in minor BAT depots, but little or no efficacy in white adipose tissues, liver and other organs. Direct overexpression of glucose transporter SLC2A1 (GLUT1) using the rAAV vector in wild type mice resulted in increased glucose uptake and glucose-dependent gene expression in BAT, indicating usefulness of this vector to increase the function even of abundant proteins. CONCLUSION: Taken together, we describe a novel brown adipocyte-specific rAAV method to express proteins for loss-of-function and gain-of-function metabolic studies. The approach will enable researchers to access brown fat swiftly, reduce animal breeding time and costs, as well as enable the creation of new transgenic mouse models combining multiple transgenes.


Sujet(s)
Adipocytes bruns , Tissu adipeux brun , Dependovirus , Vecteurs génétiques , Animaux , Souris , Dependovirus/génétique , Dependovirus/métabolisme , Vecteurs génétiques/génétique , Adipocytes bruns/métabolisme , Tissu adipeux brun/métabolisme , Souris de lignée C57BL , Injections veineuses , Mâle , Sérogroupe , Protéine-1 de découplage/métabolisme , Protéine-1 de découplage/génétique , Integrases/métabolisme , Integrases/génétique
6.
Adv Neurobiol ; 37: 53-63, 2024.
Article de Anglais | MEDLINE | ID: mdl-39207686

RÉSUMÉ

Since the classical studies of Pío del Río-Hortega, microglia research has come a long way. In particular, recent advances in bulk and single-cell (sc) transcriptomics have yielded many fascinating new insights into these intriguing immune cells at the interface with the central nervous system (CNS), both in small animal models and human samples. In parallel, tools developed by advanced mouse genetics have revealed the unique ontogeny of microglia and their striking dynamic interactions with other cells in the brain parenchyma. In this chapter, we will discuss various applications of the Cre/loxP-based approach that have enabled the study of microglia in their physiological context of the mouse brain. We will highlight selected key findings that have shaped our current understanding of these cells and discuss the technical intricacies of the Cre/loxP approach and some remaining challenges.


Sujet(s)
Encéphale , Microglie , Animaux , Souris , Encéphale/cytologie , Encéphale/immunologie , Encéphale/métabolisme , Integrases/métabolisme , Microglie/immunologie , Microglie/métabolisme , Mutagenèse/immunologie , Analyse de l'expression du gène de la cellule unique
7.
Cell Rep Methods ; 4(8): 100837, 2024 Aug 19.
Article de Anglais | MEDLINE | ID: mdl-39127043

RÉSUMÉ

Intrinsically photosensitive retinal ganglion cells (ipRGCs) play a crucial role in several physiological light responses. In this study, we generate an improved Opn4cre knockin allele (Opn4cre(DSO)), which faithfully reproduces endogenous Opn4 expression and improves compatibility with widely used reporters. We evaluated the efficacy and sensitivity of Opn4cre(DSO) for labeling in retina and brain and provide an in-depth comparison with the extensively utilized Opn4cre(Saha) line. Through this characterization, Opn4cre(DSO) demonstrated higher specificity in labeling ipRGCs with minimal recombination escape. Leveraging a combination of electrophysiological, molecular, and morphological analyses, we confirmed its sensitivity in detecting all ipRGC types (M1-M6) and defined their unique topographical distribution across the retina. In the brain, the Opn4cre(DSO) line labels ipRGC projections with minimal labeling of cell bodies. Overall, the Opn4cre(DSO) mouse line represents an improved tool for studying ipRGC function and distribution, offering a means to selectively target these cells to study light-regulated behaviors and physiology.


Sujet(s)
Integrases , Cellules ganglionnaires rétiniennes , Animaux , Cellules ganglionnaires rétiniennes/métabolisme , Souris , Integrases/génétique , Integrases/métabolisme , Opsines des bâtonnets/génétique , Opsines des bâtonnets/métabolisme , Rétine/métabolisme , Souris transgéniques , Souris de lignée C57BL , Encéphale/métabolisme
9.
Methods Mol Biol ; 2837: 185-198, 2024.
Article de Anglais | MEDLINE | ID: mdl-39044085

RÉSUMÉ

Covalently closed circular DNA (cccDNA) exists as a stable episomal minichromosome in the nucleus of hepatocytes and is responsible for hepatitis B virus (HBV) persistence. We recently reported a technique involving recombinant cccDNA (rcccDNA) of HBV by site-specific DNA recombination. A floxed monomeric HBV genome was engineered into a precursor plasmid (prcccDNA) which was excised via Cre/loxP-mediated DNA recombination to form a 3.3-kb rcccDNA bearing a loxP-chimeric intron. The foreign sequence was efficiently removed during RNA splicing, rendering a functionally seamless insertion. We characterized rcccDNA formation, effective viral transcription, and replication induced by rcccDNA both in vitro and in vivo. Furthermore, we closely simulated chronic hepatitis by using a replication-defective recombinant adenoviral vector to deliver rcccDNA to the transgenic mice expressing Cre recombinase, which led to prominent HBV persistence. Here, we describe a detailed protocol about how to construct and evaluate Cre/loxP-based recombinant HBV cccDNA system both in vitro and in vivo.


Sujet(s)
ADN circulaire , ADN viral , Virus de l'hépatite B , Integrases , Recombinaison génétique , Réplication virale , ADN circulaire/génétique , Virus de l'hépatite B/génétique , Animaux , Integrases/génétique , Integrases/métabolisme , Souris , ADN viral/génétique , Humains , Vecteurs génétiques/génétique , Souris transgéniques , Plasmides/génétique , ADN recombiné/génétique
10.
Bioorg Med Chem Lett ; 111: 129902, 2024 Oct 01.
Article de Anglais | MEDLINE | ID: mdl-39059564

RÉSUMÉ

Integrase strand transfer inhibitors (INSTIs) are the most prescribed anchor drug in antiretroviral therapy. Today, there is an increasing need for long-acting treatment of HIV-1 infection. Improving drug pharmacokinetics and anti-HIV-1 activity are key to developing more robust inhibitors suitable for long-acting formulations, but 2nd-generation INSTIs have chiral centers, making it difficult to conduct further exploration. In this study, we designed aza-tricyclic and aza-bicyclic carbamoyl pyridone scaffolds which are devoid of the problematic hemiaminal stereocenter present in dolutegravir (DTG). This scaffold hopping made it easy to introduce several substituents, and evolving structure-activity studies using these scaffolds resulted in several leads with promising properties.


Sujet(s)
Conception de médicament , Inhibiteurs de l'intégrase du VIH , Intégrase du VIH , VIH-1 (Virus de l'Immunodéficience Humaine de type 1) , Pyridones , Humains , Composés aza/composition chimique , Composés aza/pharmacologie , Composés aza/synthèse chimique , Relation dose-effet des médicaments , Intégrase du VIH/métabolisme , Inhibiteurs de l'intégrase du VIH/pharmacologie , Inhibiteurs de l'intégrase du VIH/composition chimique , Inhibiteurs de l'intégrase du VIH/synthèse chimique , VIH-1 (Virus de l'Immunodéficience Humaine de type 1)/effets des médicaments et des substances chimiques , Structure moléculaire , Pyridones/composition chimique , Pyridones/pharmacologie , Pyridones/synthèse chimique , Relation structure-activité , Integrases/composition chimique , Integrases/métabolisme , Integrases/pharmacocinétique
11.
J Neurosci ; 44(32)2024 Aug 07.
Article de Anglais | MEDLINE | ID: mdl-38977300

RÉSUMÉ

Activity of central amygdala (CeA) PKCδ expressing neurons has been linked to appetite regulation, anxiety-like behaviors, pain sensitivity, and addiction-related behaviors. Studies of the role that CeA PKCδ+ neurons play in these behaviors have largely been carried out in mice, and genetic tools that would allow selective manipulation of PKCδ+ cells in rats have been lacking. Here, we used a CRISPR/Cas9 strategy to generate a transgenic Prkcd-cre knock-in rat and characterized this model using anatomical, electrophysiological, and behavioral approaches in both sexes. In the CeA, Cre was selectively expressed in PKCδ+ cells. Anterograde projections of PKCδ+ neurons to cortical regions, subcortical regions, several hypothalamic nuclei, the amygdala complex, and midbrain dopaminergic regions were largely consistent with published mouse data. In a behavioral screen, we found no differences between Cre+ rats and Cre- wild-type littermates. Optogenetic stimulation of CeA PKCδ+ neurons in a palatable food intake assay resulted in an increased latency to first feeding and decreased total food intake, once again replicating published mouse findings. Lastly, using a real-time place preference task, we found that stimulation of PKCδ+ neurons promoted aversion, without affecting locomotor activity. Collectively, these findings establish the novel Prkcd-Cre rat line as a valuable tool that complements available mouse lines for investigating the functional role of PKCδ+ neurons.


Sujet(s)
Protein kinase C-delta , Animaux , Protein kinase C-delta/génétique , Protein kinase C-delta/métabolisme , Rats , Mâle , Femelle , Rats transgéniques , Neurones/physiologie , Noyau central de l'amygdale/physiologie , Integrases/génétique , Optogénétique/méthodes , Rat Sprague-Dawley
12.
Nucleic Acids Res ; 52(14): e64, 2024 Aug 12.
Article de Anglais | MEDLINE | ID: mdl-38953167

RÉSUMÉ

The ability to deliver large transgenes to a single genomic sequence with high efficiency would accelerate biomedical interventions. Current methods suffer from low insertion efficiency and most rely on undesired double-strand DNA breaks. Serine integrases catalyze the insertion of large DNA cargos at attachment (att) sites. By targeting att sites to the genome using technologies such as prime editing, integrases can target safe loci while avoiding double-strand breaks. We developed a method of phage-assisted continuous evolution we call IntePACE, that we used to rapidly perform hundreds of rounds of mutagenesis to systematically improve activity of PhiC31 and Bxb1 serine integrases. Novel hyperactive mutants were generated by combining synergistic mutations resulting in integration of a multi-gene cargo at rates as high as 80% of target chromosomes. Hyperactive integrases inserted a 15.7 kb therapeutic DNA cargo containing von Willebrand Factor. This technology could accelerate gene delivery therapeutics and our directed evolution strategy can easily be adapted to improve novel integrases from nature.


Sujet(s)
Évolution moléculaire dirigée , Integrases , Transgènes , Évolution moléculaire dirigée/méthodes , Integrases/métabolisme , Integrases/génétique , Humains , Mutagenèse par insertion , Mutation , Bactériophages/génétique , Bactériophages/enzymologie , Sites d'attachement (microbiologie)/génétique
13.
J Microbiol Methods ; 224: 106999, 2024 Sep.
Article de Anglais | MEDLINE | ID: mdl-39033856

RÉSUMÉ

In this study, we describe a novel method for one-step cloning and targeted duplication of P. ananatis chromosomal fragments. According to this method, the chromosomal region of interest is subcloned in vivo via λ Red recombination into the short synthetic non-replicable DNA fragment containing the excisable antibiotic-resistance marker gene and φ80 att-P site. The resulting circular non-replicating DNA molecule was immediately inserted into an alternative chromosomal locus due to φ80-integrase activity. To this end, the specially designed helper plasmid pONI, which can provide both the λ Red recombineering and φ80-integrase-mediated insertion, was constructed. In the described method, PCR amplification of the cloning fragment is unnecessary, making it convenient for manipulation of long-length DNA. Additionally, the possibility of spontaneous mutations occurring is completely precluded. This method was effectively used for the targeted chromosomal integration of additional copies of individual genes and operons up to 16 kb in size.


Sujet(s)
Chromosomes de bactérie , Clonage moléculaire , Pantoea , Plasmides , Pantoea/génétique , Clonage moléculaire/méthodes , Chromosomes de bactérie/génétique , Plasmides/génétique , ADN bactérien/génétique , Recombinaison génétique , Integrases/génétique
14.
Hua Xi Kou Qiang Yi Xue Za Zhi ; 42(4): 435-443, 2024 Aug 01.
Article de Anglais, Chinois | MEDLINE | ID: mdl-39049630

RÉSUMÉ

OBJECTIVES: This study aimed to explore the heterogeneity and gene ontology of Wnt1-Cre-marked and Pax2-Cre-marked first branchial arch cranial neural crest cells (CNCs) in mice. METHODS: The embryos of Wnt1-Cre;R26RmTmG and Pax2-Cre;R26RmTmG at embryonic day (E)8.0-E9.25 were collected for histological observation. We performed immunostaining to compare green fluorescent protein (GFP)-positive CNCs in Pax2-Cre;R26RAi9 and Wnt1-Cre;R26RAi9 mice at E15.5. Single-cell RNA sequencing (scRNA-seq) was used to analyze the first branchial arch GFP-positive CNCs from Wnt1-Cre;R26RmTmG and Pax2-cre;R26RmTmGmice at E10.5. Real time fluorescence quantitative polymerase chain reaction (q-PCR) was performed to validate the differential genes. RESULTS: Wnt1-Cre-marked and Pax2-Cre-marked CNCs migrated from the neural plateto first and second branchial arches and to the first branchial arch, respectively, at E8.0. Although Wnt1-Cre-marked and Pax2-Cre-marked CNCs were found mostly in cranial-facial tissues, the former had higher expression in palate and tongue. The results of scRNA-seq showed that Pax2-Cre-marked CNCs specifically contributed to osteoblast differentiation and ossification, while Wnt1-Cre-marked CNCs participated in limb development, cell migration, and ossification. The q-PCR data also confirmed the results of gene ontology analysis. CONCLUSIONS: Pax2-Cre mice are perfect experimental animal models for research on first branchial arch CNCs and derivatives in osteoblast differentiation and ossification.


Sujet(s)
Région branchiale , Crête neurale , Facteur de transcription PAX2 , Protéine Wnt1 , Animaux , Crête neurale/métabolisme , Souris , Protéine Wnt1/métabolisme , Facteur de transcription PAX2/métabolisme , Integrases/métabolisme , Protéines à fluorescence verte/métabolisme
15.
New Phytol ; 244(1): 318-331, 2024 Oct.
Article de Anglais | MEDLINE | ID: mdl-39081031

RÉSUMÉ

Chemical-inducible gene expression systems are commonly used to regulate gene expression for functional genomics in various plant species. However, a convenient system that can tightly regulate transgene expression in Nicotiana benthamiana is still lacking. In this study, we developed a tightly regulated copper-inducible system that can control transgene expression and conduct cell death assays in N. benthamiana. We tested several chemical-inducible systems using Agrobacterium-mediated transient expression and found that the copper-inducible system exhibited the least concerns regarding leakiness in N. benthamiana. Although the copper-inducible system can control the expression of some tested reporters, it is not sufficiently tight to regulate certain tested hypersensitive cell death responses. Using the MoClo-based synthetic biology approach, we incorporated the suicide exon HyP5SM/OsL5 and Cre/LoxP as additional regulatory elements to enhance the tightness of the regulation. This new design allowed us to tightly control the hypersensitive cell death induced by several tested leucine-rich repeat-containing proteins and their matching avirulence factors, and it can be easily applied to regulate the expression of other transgenes in transient expression assays. Our findings offer new approaches for both fundamental and translational studies in plant functional genomics.


Sujet(s)
Mort cellulaire , Cuivre , Exons , Régulation de l'expression des gènes végétaux , Integrases , Nicotiana , Végétaux génétiquement modifiés , Transgènes , Nicotiana/génétique , Nicotiana/effets des médicaments et des substances chimiques , Integrases/métabolisme , Exons/génétique , Régulation de l'expression des gènes végétaux/effets des médicaments et des substances chimiques , Cuivre/pharmacologie , Cuivre/toxicité , Mort cellulaire/effets des médicaments et des substances chimiques , Mort cellulaire/génétique
16.
Curr Opin Struct Biol ; 88: 102878, 2024 Oct.
Article de Anglais | MEDLINE | ID: mdl-39029281

RÉSUMÉ

Cre recombinase is a phage-derived enzyme that has found utility for precise manipulation of DNA sequences. Cre recognizes and recombines pairs of loxP sequences characterized by an inverted repeat and asymmetric spacer. Cre cleaves and religates its DNA targets such that error-prone repair pathways are not required to generate intact DNA products. Major obstacles to broader applications are lack of knowledge of how Cre recognizes its targets, and how its activity is controlled. The picture emerging from high resolution methods is that the dynamic properties of both the enzyme and its DNA target are important determinants of its activity in both sequence recognition and DNA cleavage. Improved understanding of the role of dynamics in the key steps along the pathway of Cre-loxP recombination should significantly advance our ability to both redirect Cre to new sequences and to control its DNA cleavage activity in the test tube and in cells.


Sujet(s)
Integrases , Recombinaison génétique , Integrases/métabolisme , Integrases/composition chimique , ADN/métabolisme , ADN/composition chimique , ADN/génétique , Humains
17.
Am J Physiol Renal Physiol ; 327(3): F489-F503, 2024 Sep 01.
Article de Anglais | MEDLINE | ID: mdl-38991008

RÉSUMÉ

Fate mapping and genetic manipulation of renin cells have relied on either noninducible Cre lines that can introduce the developmental effects of gene deletion or bacterial artificial chromosome transgene-based inducible models that may be prone to spurious and/or ectopic gene expression. To circumvent these problems, we generated an inducible mouse model in which CreERT2 is under the control of the endogenous Akr1b7 gene, an independent marker of renin cells that is expressed in a few extrarenal tissues. We confirmed the proper expression of Cre using Akr1b7CreERT2/+;R26RmTmG/+ mice in which Akr1b7+/renin+ cells become green fluorescent protein (GFP)+ upon tamoxifen administration. In embryos and neonates, GFP was found in juxtaglomerular cells, along the arterioles, and in the mesangium, and in adults, GFP was present mainly in juxtaglomerular cells. In mice treated with captopril and a low-salt diet to induce recruitment of renin cells, GFP extended along the afferent arterioles and in the mesangium. We generated Akr1b7CreERT2/+;Ren1cFl/-;R26RmTmG/+ mice to conditionally delete renin in adult mice and found a marked reduction in kidney renin mRNA and protein and mean arterial pressure in mutant animals. When subjected to a homeostatic threat, mutant mice were unable to recruit renin+ cells. Most importantly, these mice developed concentric vascular hypertrophy ruling out potential developmental effects on the vasculature due to the lack of renin. We conclude that Akr1b7CreERT2 mice constitute an excellent model for the fate mapping of renin cells and for the spatial and temporal control of gene expression in renin cells.NEW & NOTEWORTHY Fate mapping and genetic manipulation are important tools to study the identity of renin cells. Here, we report on a novel Cre mouse model, Akr1b7CreERT2, for the spatial and temporal regulation of gene expression in renin cells. Cre is properly expressed in renin cells during development and in the adult under basal conditions and under physiological stress. Moreover, renin can be efficiently deleted in the adult, leading to the development of concentric vascular hypertrophy.


Sujet(s)
Souris transgéniques , Rénine , Animaux , Rénine/métabolisme , Rénine/génétique , Souris , Appareil juxtaglomérulaire/métabolisme , Aldose reductase/génétique , Aldose reductase/métabolisme , Captopril/pharmacologie , Protéines à fluorescence verte/génétique , Protéines à fluorescence verte/métabolisme , Régulation de l'expression des gènes , Integrases/génétique , Integrases/métabolisme
18.
Neuroscience ; 556: 31-41, 2024 Sep 25.
Article de Anglais | MEDLINE | ID: mdl-39067682

RÉSUMÉ

Noradrenergic neurons play a crucial role in the functioning of the nervous system. They formed compact small clusters in the central nervous system. To target noradrenergic neurons in combination with viral tracing and achieve cell-type specific functional manipulation using chemogenetic or optogenetic tools, new transgenic animal lines are needed, especially rat models for their advantages in large body size with facilitating easy operation, physiological parameter monitoring, and accommodating complex behavioral and cognitive studies. In this study, we successfully generated a transgenic rat strain capable of expressing Cre recombinase under the control of the dopamine beta-hydroxylase (DBH) gene promoter using the CRISPR-Cas9 system. Our validation process included co-immunostaining with Cre and DBH antibodies, confirming the specific expression of Cre recombinase. Furthermore, stereotaxic injection of a fluorescence-labeled AAV-DIO virus illustrated the precise Cre-loxP-mediated recombination activity in noradrenergic neurons within the locus coeruleus (LC). Through crossbreeding with the LSL-fluorescence reporter rat line, DBH-Cre rats proved instrumental in delineating the position and structure of noradrenergic neuron clusters A1, A2, A6 (LC), and A7 in rats. Additionally, our specific activation of the LC noradrenergic neurons showed effective behavioral readout using chemogenetics of this rat line. Our results underscore the effectiveness and specificity of Cre recombinase in noradrenergic neurons, serving as a robust tool for cell-type specific targeting of small-sized noradrenergic nuclei. This approach enhances our understanding of their anatomical, physiological, and pathological roles, contributing to a more profound comprehension of noradrenergic neuron function in the nervous system.


Sujet(s)
Neurones adrénergiques , Systèmes CRISPR-Cas , Dopamine beta-monooxygenase , Integrases , Rats transgéniques , Animaux , Integrases/génétique , Integrases/métabolisme , Neurones adrénergiques/métabolisme , Rats , Dopamine beta-monooxygenase/génétique , Dopamine beta-monooxygenase/métabolisme , Locus ceruleus/métabolisme , Mâle , Rat Sprague-Dawley
19.
Mol Brain ; 17(1): 36, 2024 Jun 11.
Article de Anglais | MEDLINE | ID: mdl-38858755

RÉSUMÉ

Chronic perturbations of neuronal activity can evoke homeostatic and new setpoints for neurotransmission. Using chemogenetics to probe the relationship between neuronal cell types and behavior, we recently found reversible decreases in dopamine (DA) transmission, basal behavior, and amphetamine (AMPH) response following repeated stimulation of DA neurons in adult mice. It is unclear, however, whether altering DA neuronal activity via chemogenetics early in development leads to behavioral phenotypes that are reversible, as alterations of neuronal activity during developmentally sensitive periods might be expected to induce persistent effects on behavior. To examine the impact of developmental perturbation of DA neuron activity on basal and AMPH behavior, we expressed excitatory hM3D(Gq) in postnatal DA neurons in TH-Cre and WT mice. Basal and CNO- or AMPH-induced locomotion and stereotypy was evaluated in a longitudinal design, with clozapine N-oxide (CNO, 1.0 mg/kg) administered across adolescence (postnatal days 15-47). Repeated CNO administration did not impact basal behavior and only minimally reduced AMPH-induced hyperlocomotor response in adolescent TH-CrehM3Dq mice relative to WThM3Dq littermate controls. Following repeated CNO administration, however, AMPH-induced stereotypic behavior robustly decreased in adolescent TH-CrehM3Dq mice relative to controls. A two-month CNO washout period rescued the diminished AMPH-induced stereotypic behavior. Our findings indicate that the homeostatic compensations that take place in response to chronic hM3D(Gq) stimulation during adolescence are temporary and are dependent on ongoing chemogenetic stimulation.


Sujet(s)
Amfétamine , Neurones dopaminergiques , Comportement stéréotypé , Animaux , Amfétamine/pharmacologie , Neurones dopaminergiques/effets des médicaments et des substances chimiques , Neurones dopaminergiques/métabolisme , Comportement stéréotypé/effets des médicaments et des substances chimiques , Clozapine/pharmacologie , Clozapine/analogues et dérivés , Locomotion/effets des médicaments et des substances chimiques , Souris , Mâle , Activité motrice/effets des médicaments et des substances chimiques , Souris transgéniques , Tyrosine 3-monooxygenase/métabolisme , Tyrosine 3-monooxygenase/génétique , Comportement animal/effets des médicaments et des substances chimiques , Integrases
20.
BMC Genomics ; 25(1): 568, 2024 Jun 05.
Article de Anglais | MEDLINE | ID: mdl-38840068

RÉSUMÉ

BACKGROUND: Transgenic (Tg) mice are widely used in biomedical research, and they are typically generated by injecting transgenic DNA cassettes into pronuclei of one-cell stage zygotes. Such animals often show unreliable expression of the transgenic DNA, one of the major reasons for which is random insertion of the transgenes. We previously developed a method called "pronuclear injection-based targeted transgenesis" (PITT), in which DNA constructs are directed to insert at pre-designated genomic loci. PITT was achieved by pre-installing so called landing pad sequences (such as heterotypic LoxP sites or attP sites) to create seed mice and then injecting Cre recombinase or PhiC31 integrase mRNAs along with a compatible donor plasmid into zygotes derived from the seed mice. PITT and its subsequent version, improved PITT (i-PITT), overcome disadvantages of conventional Tg mice such as lack of consistent and reliable expression of the cassettes among different Tg mouse lines, and the PITT approach is superior in terms of cost and labor. One of the limitations of PITT, particularly using Cre-mRNA, is that the approach cannot be used for insertion of conditional expression cassettes using Cre-LoxP site-specific recombination. This is because the LoxP sites in the donor plasmids intended for achieving conditional expression of the transgene will interfere with the PITT recombination reaction with LoxP sites in the landing pad. RESULTS: To enable the i-PITT method to insert a conditional expression cassette, we modified the approach by simultaneously using PhiC31o and FLPo mRNAs. We demonstrate the strategy by creating a model containing a conditional expression cassette at the Rosa26 locus with an efficiency of 13.7%. We also demonstrate that inclusion of FLPo mRNA excludes the insertion of vector backbones in the founder mice. CONCLUSIONS: Simultaneous use of PhiC31 and FLP in i-PITT approach allows insertion of donor plasmids containing Cre-loxP-based conditional expression cassettes.


Sujet(s)
Génome , Integrases , Souris transgéniques , Animaux , Souris , Integrases/génétique , Integrases/métabolisme , Transgènes , Ciblage de gène/méthodes , Techniques de transfert de gènes , Plasmides/génétique , ARN messager/génétique , ARN messager/métabolisme , Mutagenèse par insertion
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