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1.
J Environ Sci (China) ; 148: 230-242, 2025 Feb.
Article de Anglais | MEDLINE | ID: mdl-39095160

RÉSUMÉ

Fish constitutes the main protein source for the Amazonian population. However, the impact of different anthropogenic activities on trace element and metal accumulation in fish and their risks for human health at a regional scale remain largely unexplored. Here we assessed exposure levels of 10 trace elements and metals (Cr, Mn, Fe, Ni, Cu, Zn, As, Cd, Pb, and Hg) in 56 samples belonging to 11 different species of fish from the Brazilian Amazon. We studied the relationship between exposure levels, fish origin, and fish feeding habits, and assessed toxicological and carcinogenic risks for the Amazonian population. No significant correlation was found between sampling site and exposure levels to the studied elements, but a significant difference was found between the accumulation of some metals and the position of the fish species in the food chain. The concentrations of Cr and Hg in fish flesh were found to exceed the Brazilian limits for human consumption. This study shows that current fish consumption patterns can lead to estimated daily intakes of Hg, As and Cr that exceed the oral reference dose, thus posing a toxicological concern. Furthermore, carcinogenic risks may be expected due to the continued exposure to Cr and As. The results of this study show that the consumption of wild caught fish in the Amazon region should be controlled. Moreover, continued monitoring of trace element and metal contamination in fish and on the health of the Amazonian population is recommended, particularly for riverine and indigenous communities.


Sujet(s)
Poissons , Contamination des aliments , Métaux , Oligoéléments , Polluants chimiques de l'eau , Animaux , Brésil , Humains , Polluants chimiques de l'eau/analyse , Oligoéléments/analyse , Contamination des aliments/analyse , Appréciation des risques , Métaux/analyse , Surveillance de l'environnement
2.
J Environ Sci (China) ; 148: 364-374, 2025 Feb.
Article de Anglais | MEDLINE | ID: mdl-39095171

RÉSUMÉ

Increasing nitrogen and phosphorus discharge and decreasing sediment input have made silicon (Si) a limiting element for diatoms in estuaries. Disturbances in nutrient structure and salinity fluctuation can greatly affect metal uptake by estuarine diatoms. However, the combined effects of Si and salinity on metal accumulation in these diatoms have not been evaluated. In this study, we aimed to investigate how salinity and Si availability combine to influence the adsorption of metals by a widely distributed diatom Phaeodactylum tricornutum. Our data indicate that replete Si and low salinity in seawater can enhance cadmium and copper adsorption onto the diatom surface. At the single-cell level, surface potential was a dominant factor determining metal adsorption, while surface roughness also contributed to the higher metal loading capacity at lower salinities. Using a combination of non-invasive micro-test technology, atomic force microscopy, X-ray photoelectron spectroscopy, and Fourier transform infrared spectroscopy, we demonstrate that the diversity and abundance of the functional groups embedded in diatom cell walls vary with salinity and Si supply. This results in a change in the cell surface potential and transient metal influx. Our study provides novel mechanisms to explain the highly variable metal adsorption capacity of a model estuarine diatom.


Sujet(s)
Diatomées , Salinité , Silicium , Polluants chimiques de l'eau , Adsorption , Silicium/composition chimique , Polluants chimiques de l'eau/composition chimique , Polluants chimiques de l'eau/analyse , Estuaires , Eau de mer/composition chimique , Métaux/composition chimique
3.
J Environ Sci (China) ; 147: 62-73, 2025 Jan.
Article de Anglais | MEDLINE | ID: mdl-39003077

RÉSUMÉ

Non-ferrous metal smelting poses significant risks to public health. Specifically, the copper smelting process releases arsenic, a semi-volatile metalloid, which poses an emerging exposure risk to both workers and nearby residents. To comprehensively understand the internal exposure risks of metal(loid)s from copper smelting, we explored eighteen metal(loid)s and arsenic metabolites in the urine of both occupational and non-occupational populations using inductively coupled plasma mass spectrometry with high-performance liquid chromatography and compared their health risks. Results showed that zinc and copper (485.38 and 14.00 µg/L), and arsenic, lead, cadmium, vanadium, tin and antimony (46.80, 6.82, 2.17, 0.40, 0.44 and 0.23 µg/L, respectively) in workers (n=179) were significantly higher compared to controls (n=168), while Zinc, tin and antimony (412.10, 0.51 and 0.15 µg/L, respectively) of residents were significantly higher than controls. Additionally, workers had a higher monomethyl arsenic percentage (MMA%), showing lower arsenic methylation capacity. Source appointment analysis identified arsenic, lead, cadmium, antimony, tin and thallium as co-exposure metal(loid)s from copper smelting, positively relating to the age of workers. The hazard index (HI) of workers exceeded 1.0, while residents and control were approximately at 1.0. Besides, all three populations had accumulated cancer risks exceeding 1.0 × 10-4, and arsenite (AsIII) was the main contributor to the variation of workers and residents. Furthermore, residents living closer to the smelting plant had higher health risks. This study reveals arsenic exposure metabolites and multiple metals as emerging contaminants for copper smelting exposure populations, providing valuable insights for pollution control in non-ferrous metal smelting.


Sujet(s)
Métallurgie , Exposition professionnelle , Humains , Exposition professionnelle/analyse , Exposition environnementale/statistiques et données numériques , Métaux/urine , Métaux/analyse , Appréciation des risques , Arsenic/analyse , Surveillance de l'environnement , Adulte , Polluants environnementaux/analyse , Adulte d'âge moyen
4.
J Med Case Rep ; 18(1): 381, 2024 Aug 16.
Article de Anglais | MEDLINE | ID: mdl-39148113

RÉSUMÉ

BACKGROUND: Ingestion of foreign bodies may be seen unconsciously or intentionally in patients with mental health problems. Most cases pass through the esophagus slowly; however, in some cases, the tumor may be located in narrower areas of the digestive tract that require endoscopic or surgical intervention. This study describes a rare case of successful removal of more than 450 pieces of metal objects from the stomach of a 36-year-old man via ingestion of foreign bodies at Imam Khomeini Hospital in Ahvaz. CASE PRESENTATION: A 36-year-old male patient (Aryan race) presented with complaints of chronic abdominal pain, frequent vomiting, and intolerance to liquids and food. The patient's companions mentioned a history of gradual ingestion of small metal objects 3 months prior. The patient was conscious and had stable vital signs. In the patient's X-ray and endoscopy, multiple metal objects inside the patient's stomach were observed, causing gastric outlet obstruction. The patient underwent gastrostomy surgery, and 452 screws, nuts, keys, stones, and other metal parts weighing 2900 g were removed from the stomach. Five days after the operation, the patient was transferred to the psychiatric service in good general condition and was diagnosed with psychosis, and her condition returned to normal at follow-up. CONCLUSION: Successful removal of this foreign body is rare. In chronic abdominal pain, especially in the context of psychiatric disorders, attention should be given to the ingestion of foreign bodies. In swallowing large amounts of sharp and metallic foreign objects, surgical intervention is necessary, especially in cases of obstruction, and saves the patient's life.


Sujet(s)
Douleur abdominale , Corps étrangers , Estomac , Humains , Adulte , Mâle , Corps étrangers/chirurgie , Estomac/chirurgie , Douleur abdominale/étiologie , Métaux , Sténose du défilé gastrique/chirurgie , Sténose du défilé gastrique/étiologie , Gastrostomie , Résultat thérapeutique , Vomissement/étiologie
5.
Bull Environ Contam Toxicol ; 113(3): 29, 2024 Aug 16.
Article de Anglais | MEDLINE | ID: mdl-39152315

RÉSUMÉ

In this study, the concentrations of cadmium (Cd), iron (Fe), manganese (Mn), nickel (Ni), lead (Pb) and zinc (Zn) in plants sampled from Mt. Madra were investigated. Furthermore, the distribution characteristics and source identification of potentially toxic metals were investigated with the application of Positive Matrix Factorization (PMF) modelling. Samples of 26 different plant species were taken from Mt. Madra at elevations ranging from 177 to 1347 m using the multi-point sampling approach. The metal quantities measured by ICP-OES are the following sequences (mean ± SD) (mg/kg): Fe (974.96 ± 29.6) > Mn (111.81 ± 2.6) > Zn (27.28 ± 0.2) > Ni (2.17 ± 0.03) > Pb (0.77 ± 0.01) > Cd (0.12 ± 0.01). According to the plant samples in which the highest values were determined, the metals are as follows: Cd (Lathyrus laxiflorus, 0.401 mg/kg), Fe (Ajuga orientalis, 7621.207 mg/kg), Mn (Castanea sativa, 724.927 mg/kg), Ni (Prunella laciniata, 6.947 mg/kg), Pb (Crataegus stevenii, 3.955 mg/kg) and Zn (Prunella laciniata, 50.802 mg/kg). The results of the PMF model showed that Cd had an atmospheric transport factor originated and transported from industrial activites, Ni had a substrate factor, Fe, Mn, Pb and Zn were influenced by different anthropogenic factors.


Sujet(s)
Écosystème , Surveillance de l'environnement , Polluants du sol , Surveillance de l'environnement/méthodes , Polluants du sol/analyse , Plantes , Métaux lourds/analyse , Métaux/analyse
6.
World J Gastroenterol ; 30(29): 3534-3537, 2024 Aug 07.
Article de Anglais | MEDLINE | ID: mdl-39156499

RÉSUMÉ

The role of endoscopy in pathologies of the bile duct and gallbladder has seen notable advancements over the past two decades. With advancements in stent technology, such as the development of lumen-apposing metal stents, and adoption of endoscopic ultrasound and electrosurgical principles in therapeutic endoscopy, what was once considered endoscopic failure has transformed into failure of an approach that could be salvaged by a second- or third-line endoscopic strategy. Incorporation of these advancements in routine patient care will require formal training and multidisciplinary acceptance of established techniques and collaboration for advancement of experimental techniques to generate robust evidence that can be utilized to serve patients to the best of our ability.


Sujet(s)
Drainage , Endosonographie , Endoprothèses , Humains , Drainage/instrumentation , Drainage/méthodes , Endosonographie/méthodes , Endosonographie/instrumentation , Échec thérapeutique , Métaux , Conduits biliaires/imagerie diagnostique , Conduits biliaires/chirurgie , Cholestase/chirurgie , Cholestase/imagerie diagnostique , Cholestase/thérapie , Cholestase/étiologie , Cholangiopancréatographie rétrograde endoscopique/instrumentation , Cholangiopancréatographie rétrograde endoscopique/méthodes
7.
Mar Pollut Bull ; 206: 116783, 2024 Sep.
Article de Anglais | MEDLINE | ID: mdl-39089206

RÉSUMÉ

Metal concentrations were determined in tissues of finfish, crabs, and bivalve molluscs collected from marine waters near Port Pirie, South Australia, the site of a long-standing multi-metals smelter and refinery. A general trend of tissue metal concentrations in order of highest to lowest was observed in bivalves > crabs > finfish. A lead concentration of 158 ± 6.6 mg/kg (wet wt.) was observed in blue mussels (Mytilus galloprovincialis) sampled close to the smelter. Lead concentrations correlated positively with proximity to the smelter in all biota analysed. Similar relationships were observed for cadmium, copper, zinc and selenium in all biota except razorfish (Pinna bicolor; Bivalvia: Pinnidae), which showed no correlation with proximity to the smelter for these metals. Inorganic arsenic concentrations were below the limit of reporting in the majority of the analysed samples, however inorganic arsenic concentrations in blue swimmer crabs (Portunus armatus) and blue mussels correlated with proximity to the smelter. Mercury concentrations in the biota analysed were generally low and showed variable relationships with proximity to the smelter, with no significant correlation observed in finfish and razorfish, a significant positive correlation in blue mussels, and a significant negative correlation in blue swimmer crabs. This is the first major study of metal concentrations in recreationally-targeted marine species near Port Pirie species for more than two decades. Comparison with data from previous studies conducted shows little change in tissue metal concentrations in marine biota near Port Pirie over the past 40 years.


Sujet(s)
Bivalvia , Brachyura , Surveillance de l'environnement , Poissons , Métaux , Polluants chimiques de l'eau , Animaux , Polluants chimiques de l'eau/analyse , Polluants chimiques de l'eau/métabolisme , Brachyura/métabolisme , Bivalvia/métabolisme , Métaux/métabolisme , Métaux/analyse , Poissons/métabolisme , Australie-Méridionale , Métallurgie , Métaux lourds/analyse , Métaux lourds/métabolisme
8.
BMC Public Health ; 24(1): 2079, 2024 Aug 01.
Article de Anglais | MEDLINE | ID: mdl-39090615

RÉSUMÉ

BACKGROUND: Many studies have investigated the role of metals in various types of malignancies. Considering the wide range of studies conducted in this field and the achievement of different results, the presented systematic review was performed to obtain the results of investigations on the prevention and occurrence of various types of cancer associated with metal exposures. METHODS: In this review, research was conducted in the three databases: Scopus, PubMed, and Web of Science without historical restrictions until May 31, 2024. Animal studies, books, review articles, conference papers, and letters to the editors were omitted. The special checklist of Joanna Briggs Institute (JBI) was used for the quality assessment of the articles. Finally, the findings were classified according to the effect of the metal as preventive or carcinogenic. RESULTS: The total number of retrieved articles was 4695, and 71 eligible results were used for further investigation. In most studies, the concentration of toxic metals such as lead (Pb), chromium (Cr (VI)), arsenic (As), cadmium (Cd), and nickel (Ni) in the biological and clinical samples of cancer patients was higher than that of healthy people. In addition, the presence of essential elements, such as selenium (Se), zinc (Zn), iron (Fe), and manganese (Mn) in tolerable low concentrations was revealed to have anti-cancer properties, while exposure to high concentrations has detrimental health effects. CONCLUSIONS: Metals have carcinogenic effects at high levels of exposure. Taking preventive measures, implementing timely screening, and reducing the emission of metal-associated pollutants can play an effective role in reducing cancer rates around the world.


Sujet(s)
Cancérogènes , Tumeurs , Humains , Tumeurs/prévention et contrôle , Cancérogènes/toxicité , Métaux , Exposition environnementale/effets indésirables , Exposition environnementale/prévention et contrôle , Métaux lourds
9.
Sci Rep ; 14(1): 18814, 2024 08 13.
Article de Anglais | MEDLINE | ID: mdl-39138292

RÉSUMÉ

Exposure assessments to metalworking fluids (MWF) is difficult considering the complex nature of MWF. This study describes a comprehensive exposure assessment to straight and water-based MWFs among workers from 20 workshops. Metal and organic carbon (OC) content in new and used MWF were determined. Full-shift air samples of inhalable particulate and gaseous fraction were collected and analysed gravimetrically and for metals, OC, and aldehydes. Exposure determinants were ascertained through observations and interviews with workers. Determinants associated with personal inhalable particulate and gaseous fractions were systematically identified using mixed models. Similar inhalable particle exposure was observed for straight and water-based MWFs (64-386 µg/m3). The gaseous fraction was the most important contributor to the total mass fraction for both straight (322-2362 µg/m3) and water-based MWFs (101-699 µg/m3). The aerosolized particles exhibited low metal content irrespective of the MWF type; however, notable concentrations were observed in the sumps potentially reaching hazardous concentrations. Job activity clusters were important determinants for both exposure to particulate and gaseous fractions from straight MWF. Current machine enclosures remain an efficient determinant to reduce particulate MWF but were inefficient for the gaseous fraction. Properly managed water-based MWF meaning no recycling and no contamination from hydraulic fluids minimizes gaseous exposure. Workshop temperature also influenced the mass fractions. These findings suggest that exposures may be improved with control measures that reduce the gaseous fraction and proper management of MWF.


Sujet(s)
Polluants atmosphériques d'origine professionnelle , Exposition par inhalation , Métallurgie , Exposition professionnelle , Matière particulaire , Exposition professionnelle/analyse , Humains , Exposition par inhalation/analyse , Matière particulaire/analyse , Polluants atmosphériques d'origine professionnelle/analyse , Métaux/analyse , Adulte , Eau/composition chimique , Mâle , Gaz/analyse , Surveillance de l'environnement/méthodes , Adulte d'âge moyen , Femelle
10.
Elife ; 132024 Aug 14.
Article de Anglais | MEDLINE | ID: mdl-39141555

RÉSUMÉ

Metal-ion-dependent nucleases play crucial roles in cellular defense and biotechnological applications. Time-resolved crystallography has resolved catalytic details of metal-ion-dependent DNA hydrolysis and synthesis, uncovering the essential roles of multiple metal ions during catalysis. The histidine-metal (His-Me) superfamily nucleases are renowned for binding one divalent metal ion and requiring a conserved histidine to promote catalysis. Many His-Me family nucleases, including homing endonucleases and Cas9 nuclease, have been adapted for biotechnological and biomedical applications. However, it remains unclear how the single metal ion in His-Me nucleases, together with the histidine, promotes water deprotonation, nucleophilic attack, and phosphodiester bond breakage. By observing DNA hydrolysis in crystallo with His-Me I-PpoI nuclease as a model system, we proved that only one divalent metal ion is required during its catalysis. Moreover, we uncovered several possible deprotonation pathways for the nucleophilic water. Interestingly, binding of the single metal ion and water deprotonation are concerted during catalysis. Our results reveal catalytic details of His-Me nucleases, which is distinct from multi-metal-ion-dependent DNA polymerases and nucleases.


Sujet(s)
ADN , Histidine , Histidine/métabolisme , Histidine/composition chimique , ADN/métabolisme , ADN/composition chimique , Cristallographie aux rayons X , Catalyse , Métaux/métabolisme , Métaux/composition chimique , Hydrolyse , Cations divalents/métabolisme , Modèles moléculaires
11.
Cell Biol Toxicol ; 40(1): 72, 2024 Aug 20.
Article de Anglais | MEDLINE | ID: mdl-39162885

RÉSUMÉ

Cell death maintains cell morphology and homeostasis during development by removing damaged or obsolete cells. The concentration of metal ions whithin cells is regulated by various intracellular transporters and repositories to maintain dynamic balance. External or internal stimuli might increase the concentration of metal ions, which results in ions overloading. Abnormal accumulation of large amounts of metal ions can lead to disruption of various signaling in the cell, which in turn can produce toxic effects and lead to the occurrence of different types of cell deaths. In order to further study the occurrence and development of metal ions overloading induced cell death, this paper reviewed the regulation of Ca2+, Fe3+, Cu2+ and Zn2+ metal ions, and the internal mechanism of cell death induced by overloading. Furthermore, we found that different metal ions possess a synergistic and competitive relationship in the regulation of cell death. And the enhanced level of oxidative stress was present in all the processes of cell death due to metal ions overloading, which possibly due to the combination of factors. Therefore, this review offers a theoretical foundation for the investigation of the toxic effects of metal ions, and presents innovative insights for targeted regulation and therapeutic intervention. HIGHLIGHTS: • Metal ions overloading disrupts homeostasis, which in turn affects the regulation of cell death. • Metal ions overloading can cause cell death via reactive oxygen species (ROS). • Different metal ions have synergistic and competitive relationships for regulating cell death.


Sujet(s)
Mort cellulaire , Métaux , Espèces réactives de l'oxygène , Humains , Mort cellulaire/effets des médicaments et des substances chimiques , Métaux/toxicité , Métaux/métabolisme , Espèces réactives de l'oxygène/métabolisme , Animaux , Stress oxydatif/effets des médicaments et des substances chimiques , Ions/métabolisme , Homéostasie/effets des médicaments et des substances chimiques , Apoptose/effets des médicaments et des substances chimiques
12.
BMC Pulm Med ; 24(1): 386, 2024 Aug 11.
Article de Anglais | MEDLINE | ID: mdl-39128985

RÉSUMÉ

BACKGROUND: Polycyclic aromatic hydrocarbons (PAHs) and metals were associated with decreased lung function, but co-exposure effects and underlying mechanism remained unknown. METHODS: Among 1,123 adults from National Health and Nutrition Examination Survey 2011-2012, 10 urinary PAHs, 11 urinary metals, and peripheral white blood cell (WBC) count were determined, and 5 lung function indices were measured. Least absolute shrinkage and selection operator, Bayesian kernel machine regression, and quantile-based g-computation were used to estimate co-exposure effects on lung function. Mediation analysis was used to explore mediating role of WBC. RESULTS: These models demonstrated that PAHs and metals were significantly associated with lung function impairment. Bayesian kernel machine regression models showed that comparing to all chemicals fixed at median level, forced expiratory volume in 1 s (FEV1)/forced vital capacity, peak expiratory flow, and forced expiratory flow between 25 and 75% decreased by 1.31% (95% CI: 0.72%, 1.91%), 231.62 (43.45, 419.78) mL/s, and 131.64 (37.54, 225.74) mL/s respectively, when all chemicals were at 75th percentile. In the quantile-based g-computation, each quartile increase in mixture was associated with 104.35 (95% CI: 40.67, 168.02) mL, 1.16% (2.11%, 22.40%), 294.90 (78.37, 511.43) mL/s, 168.44 (41.66, 295.22) mL/s decrease in the FEV1, FEV1/forced vital capacity, peak expiratory flow, and forced expiratory flow between 25% and 75%, respectively. 2-Hydroxyphenanthrene, 3-Hydroxyfluorene, and cadmium were leading contributors to the above associations. WBC mediated 8.22%-23.90% of association between PAHs and lung function. CONCLUSIONS: Co-exposure of PAHs and metals impairs lung function, and WBC could partially mediate this relationship. Our findings elucidate co-exposure effects of environmental mixtures on respiratory health and underlying mechanisms, suggesting that focusing on highly prioritized toxicants would effectively attenuate adverse effects.


Sujet(s)
Poumon , Enquêtes nutritionnelles , Hydrocarbures aromatiques polycycliques , Humains , Hydrocarbures aromatiques polycycliques/urine , Mâle , Femelle , Adulte , Adulte d'âge moyen , Poumon/physiopathologie , Poumon/effets des médicaments et des substances chimiques , Volume expiratoire maximal par seconde , Exposition environnementale/effets indésirables , Capacité vitale , Théorème de Bayes , Numération des leucocytes , Métaux/urine , Inflammation/urine , Tests de la fonction respiratoire , Analyse de médiation
13.
Int J Mol Sci ; 25(15)2024 Aug 04.
Article de Anglais | MEDLINE | ID: mdl-39126084

RÉSUMÉ

Nowadays, owing to the new technological and industrial requirements for equipment, such as flexibility or multifunctionally, the development of all-solid-state supercapacitors and Li-ion batteries has become a goal for researchers. For these purposes, the composite material approach has been widely proposed due to the promising features of woven carbon fiber as a substrate material for this type of material. Carbon fiber displays excellent mechanical properties, flexibility, and high electrical conductivity, allowing it to act as a substrate and a collector at the same time. However, carbon fiber's energy-storage capability is limited. Several coatings have been proposed for this, with nanostructured transition metal oxides being one of the most popular due to their high theoretical capacity and surface area. In this overview, the main techniques used to achieve these coatings-such as solvothermal synthesis, MOF-derived obtention, and electrochemical deposition-are summarized, as well as the main strategies for alleviating the low electrical conductivity of transition metal oxides, which is the main drawback of these materials.


Sujet(s)
Fibre de carbone , Capacité électrique , Alimentations électriques , Électrodes , Lithium , Nanostructures , Oxydes , Lithium/composition chimique , Fibre de carbone/composition chimique , Oxydes/composition chimique , Nanostructures/composition chimique , Éléments de transition/composition chimique , Conductivité électrique , Métaux/composition chimique
14.
Nat Commun ; 15(1): 6671, 2024 Aug 06.
Article de Anglais | MEDLINE | ID: mdl-39107276

RÉSUMÉ

Silk fibers' unique mechanical properties have made them desirable materials, yet their formation mechanism remains poorly understood. While ions are known to support silk fiber production, their exact role has thus far eluded discovery. Here, we use cryo-electron microscopy coupled with elemental analysis to elucidate the changes in the composition and spatial localization of metal ions during silk evolution inside the silk gland. During the initial protein secretion and storage stages, ions are homogeneously dispersed in the silk gland. Once the fibers are spun, the ions delocalize from the fibroin core to the sericin-coating layer, a process accompanied by protein chain alignment and increased feedstock viscosity. This change makes the protein more shear-sensitive and initiates the liquid-to-solid transition. Selective metal ion doping modifies silk fibers' mechanical performance. These findings enhance our understanding of the silk fiber formation mechanism, laying the foundations for developing new concepts in biomaterial design.


Sujet(s)
Bombyx , Cryomicroscopie électronique , Fibroïne , Soie , Bombyx/métabolisme , Animaux , Soie/composition chimique , Soie/biosynthèse , Soie/métabolisme , Fibroïne/composition chimique , Fibroïne/métabolisme , Ions , Métaux/composition chimique , Métaux/métabolisme , Séricines/composition chimique , Séricines/métabolisme , Viscosité
15.
Physiol Plant ; 176(4): e14463, 2024.
Article de Anglais | MEDLINE | ID: mdl-39113602

RÉSUMÉ

The behavior of many plant enzymes depends on the metals and other ligands to which they are bound. A previous study demonstrated that tobacco Rubisco binds almost equally to magnesium and manganese and rapidly exchanges one metal for the other. The present study characterizes the kinetics of Rubisco and the plastidial malic enzyme when bound to either metal. When Rubisco purified from five C3 species was bound to magnesium rather than manganese, the specificity for CO2 over O2, (Sc/o) increased by 25% and the ratio of the maximum velocities of carboxylation / oxygenation (Vcmax/Vomax) increased by 39%. For the recombinant plastidial malic enzyme, the forward reaction (malate decarboxylation) was 30% slower and the reverse reaction (pyruvate carboxylation) was three times faster when bound to manganese rather than magnesium. Adding 6-phosphoglycerate and NADP+ inhibited carboxylation and oxygenation when Rubisco was bound to magnesium and stimulated oxygenation when it was bound to manganese. Conditions that favored RuBP oxygenation stimulated Rubisco to convert as much as 15% of the total RuBP consumed into pyruvate. These results are consistent with a stromal biochemical pathway in which (1) Rubisco when associated with manganese converts a substantial amount of RuBP into pyruvate, (2) malic enzyme when associated with manganese carboxylates a substantial portion of this pyruvate into malate, and (3) chloroplasts export additional malate into the cytoplasm where it generates NADH for assimilating nitrate into amino acids. Thus, plants may regulate the activities of magnesium and manganese in leaves to balance organic carbon and organic nitrogen as atmospheric CO2 fluctuates.


Sujet(s)
Chloroplastes , Ribulose bisphosphate carboxylase , Chloroplastes/métabolisme , Ribulose bisphosphate carboxylase/métabolisme , Ligands , Dioxyde de carbone/métabolisme , Manganèse/métabolisme , Cycle du carbone , Oxygène/métabolisme , Photosynthèse/physiologie , Magnésium/métabolisme , Métaux/métabolisme , Cinétique , Carbone/métabolisme , Malates/métabolisme , Malate dehydrogenase/métabolisme
16.
BMC Med Imaging ; 24(1): 204, 2024 Aug 06.
Article de Anglais | MEDLINE | ID: mdl-39107679

RÉSUMÉ

BACKGROUND: Computed tomography (CT) is widely in clinics and is affected by metal implants. Metal segmentation is crucial for metal artifact correction, and the common threshold method often fails to accurately segment metals. PURPOSE: This study aims to segment metal implants in CT images using a diffusion model and further validate it with clinical artifact images and phantom images of known size. METHODS: A retrospective study was conducted on 100 patients who received radiation therapy without metal artifacts, and simulated artifact data were generated using publicly available mask data. The study utilized 11,280 slices for training and verification, and 2,820 slices for testing. Metal mask segmentation was performed using DiffSeg, a diffusion model incorporating conditional dynamic coding and a global frequency parser (GFParser). Conditional dynamic coding fuses the current segmentation mask and prior images at multiple scales, while GFParser helps eliminate high-frequency noise in the mask. Clinical artifact images and phantom images are also used for model validation. RESULTS: Compared with the ground truth, the accuracy of DiffSeg for metal segmentation of simulated data was 97.89% and that of DSC was 95.45%. The mask shape obtained by threshold segmentation covered the ground truth and DSCs were 82.92% and 84.19% for threshold segmentation based on 2500 HU and 3000 HU. Evaluation metrics and visualization results show that DiffSeg performs better than other classical deep learning networks, especially for clinical CT, artifact data, and phantom data. CONCLUSION: DiffSeg efficiently and robustly segments metal masks in artifact data with conditional dynamic coding and GFParser. Future work will involve embedding the metal segmentation model in metal artifact reduction to improve the reduction effect.


Sujet(s)
Artéfacts , Métaux , Fantômes en imagerie , Prothèses et implants , Tomodensitométrie , Humains , Tomodensitométrie/méthodes , Études rétrospectives , Algorithmes
17.
J Chem Inf Model ; 64(15): 6216-6229, 2024 Aug 12.
Article de Anglais | MEDLINE | ID: mdl-39092854

RÉSUMÉ

The critical importance of accurately predicting mutations in protein metal-binding sites for advancing drug discovery and enhancing disease diagnostic processes cannot be overstated. In response to this imperative, MetalTrans emerges as an accurate predictor for disease-associated mutations in protein metal-binding sites. The core innovation of MetalTrans lies in its seamless integration of multifeature splicing with the Transformer framework, a strategy that ensures exhaustive feature extraction. Central to MetalTrans's effectiveness is its deep feature combination strategy, which merges evolutionary-scale modeling amino acid embeddings with ProtTrans embeddings, thus shedding light on the biochemical properties of proteins. Employing the Transformer component, MetalTrans leverages the self-attention mechanism to delve into higher-level representations. Utilizing mutation site information for feature fusion not only enriches the feature set but also sidesteps the common pitfall of overestimation linked to protein sequence-based predictions. This nuanced approach to feature fusion is a key differentiator, enabling MetalTrans to outperform existing methods significantly, as evidenced by comparative analyses. Our evaluations across varied metal binding site data sets (specifically Zn, Ca, Mg, and Mix) underscore MetalTrans's superior performance, which achieved the average AUC values of 0.971, 0.965, 0.980, and 0.945 on multiple 5-fold cross-validation, respectively. Remarkably, against the multichannel convolutional neural network method on a benchmark independent test set, MetalTrans demonstrated unparalleled robustness and superiority, boasting the AUC score of 0.998 on multiple 5-fold cross-validation. Our comprehensive examination of the predicted outcomes further confirms the effectiveness of the model. The source codes, data sets, and prediction results for MetalTrans can be accessed for academic usage at https://github.com/EduardWang/MetalTrans.


Sujet(s)
Métaux , Mutation , Sites de fixation , Métaux/composition chimique , Métaux/métabolisme , Humains , Protéines/composition chimique , Protéines/génétique , Protéines/métabolisme , Modèles moléculaires , Biologie informatique/méthodes , Bases de données de protéines
18.
BMC Microbiol ; 24(1): 300, 2024 Aug 12.
Article de Anglais | MEDLINE | ID: mdl-39135165

RÉSUMÉ

BACKGROUND: Rhododendron delavayi is a natural shrub that is distributed at different elevations in the karst region of Bijie, China, and that has an important role in preventing land degradation in this region. In this study, we determined the soil mineral element contents and soil enzyme activities. The composition of the soil bacterial community of R. delavayi at three elevations (1448 m, 1643 m, and 1821 m) was analyzed by high-throughput sequencing, and the interrelationships among the soil bacterial communities, mineral elements, and enzyme activities were determined. RESULTS: The Shannon index of the soil bacterial community increased and then decreased with increasing elevation and was highest at 1643 m. Elevations increased the number of total nodes and edges of the soil bacterial community network, and more positive correlations at 1821 m suggested stronger intraspecific cooperation. Acidobacteria, Actinobacteria and Proteobacteria were the dominant phyla at all three elevations. The Mantel test and correlation analysis showed that Fe and soil urease significantly affected bacterial communities at 1448 m; interestingly, Chloroflexi was positively related to soil urease at 1448 m, and Actinobacteria was positively correlated with Ni and Zn at 1821 m. Fe and soil urease significantly influenced the bacterial communities at lower elevations, and high elevation (1821 m) enhanced the positive interactions of the soil bacteria, which might be a strategy for R. delavayi to adapt to high elevation environments. CONCLUSION: Elevation significantly influenced the composition of soil bacterial communities by affecting the content of soil mineral elements and soil enzyme activity.


Sujet(s)
Bactéries , Forêts , Rhododendron , Microbiologie du sol , Sol , Sol/composition chimique , Rhododendron/microbiologie , Chine , Bactéries/classification , Bactéries/génétique , Bactéries/enzymologie , Bactéries/isolement et purification , Métaux/analyse , Actinobacteria/génétique , Actinobacteria/enzymologie , Actinobacteria/isolement et purification , Actinobacteria/classification , Microbiote , Urease/métabolisme , Acidobacteria/génétique , Acidobacteria/isolement et purification , Acidobacteria/enzymologie , Acidobacteria/classification , ARN ribosomique 16S/génétique , Phylogenèse , Séquençage nucléotidique à haut débit
19.
Water Sci Technol ; 90(3): 824-843, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-39141037

RÉSUMÉ

In recent years, studies on the degradation of emerging organic contaminants by sulfate radical (SO4-·) based advanced oxidation processes (SR-AOPs) have triggered increasing attention. Metal-loaded biochar (Me-BC) can effectively prevent the agglomeration and leaching of transition metals, and its good physicochemical properties and abundant active sites induce outstanding in activating persulfate (PS) for pollutant degradation, which is of great significance in the field of advanced oxidation. In this paper, we reviewed the preparation method and stability of Me-BC, the effect of metal loading on the physicochemical properties of biochar, the pathways of pollutant degradation by Me-BC-activated PS (including free radical pathways: SO4-·, hydroxyl radical (·OH), superoxide radicals (O2-·); non-free radical pathways: singlet oxygen (1O2), direct electron transfer), and discussed the activation of different active sites (including metal ions, persistent free radicals, oxygen-containing functional groups, defective structures, etc.) in the SR-AOPs system. Finally, the prospect was presented for the current research progress of Me-BC in SR-AOPs technology.


Sujet(s)
Charbon de bois , Sulfates , Polluants chimiques de l'eau , Charbon de bois/composition chimique , Sulfates/composition chimique , Polluants chimiques de l'eau/composition chimique , Métaux/composition chimique , Oxydoréduction
20.
ACS Sens ; 9(8): 3979-3985, 2024 Aug 23.
Article de Anglais | MEDLINE | ID: mdl-39093667

RÉSUMÉ

Metal oxide gas sensors (MOGS), crucial components in monitoring air quality and detecting hazardous gases, are well known for their poisoning effects when exposed to certain gas molecules, such as hydrogen sulfide. Surprisingly, our research reveals that high-temperature H2S treatment leads to an enhancement effect rather than response decay. This study investigates the time-decaying response enhancement, being attributed to the formation of metal sulfide and metal sulfate on the metal oxide's surface, enhancing the electronic sensitization. Such an enhancement effect is demonstrated for various gases, including CO, CH3CH2OH, CH4, HCHO, and NH3. Additionally, the impacts of H2S treatment on the response and recovery time are also observed. Surface compositional analysis are conducted with X-ray photoelectron spectroscopy. A proposed mechanism for the enhancement effect is elaborated, highlighting the role of electronic sensitization and the sulfide-sulfate component. This research offers valuable insights into the potential applications of metal oxide sensors in sulfide-presented harsh environments in gas sensing, encouraging future exploration of optimized sensor materials, operation temperature, and the development of hydrogen sulfide poisoning-resistant and higher sensitivity MOGS.


Sujet(s)
Gaz , Sulfure d'hydrogène , Oxydes , Sulfure d'hydrogène/analyse , Oxydes/composition chimique , Gaz/composition chimique , Gaz/analyse , Température élevée , Métaux/composition chimique
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