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1.
Glycobiology ; 34(9)2024 Jul 26.
Article de Anglais | MEDLINE | ID: mdl-39088584

RÉSUMÉ

The limited availability of efficient treatments for Candida infections and the increased emergence of antifungal-resistant strains stimulates the search for new antifungal agents. We have previously isolated a sunflower mannose-binding lectin (Helja) with antifungal activity against Candida albicans, capable of binding mannose-bearing oligosaccharides exposed on the cell surface. This work aimed to investigate the biological and biophysical basis of Helja's binding to C. albicans cell wall mannans and its influence on the fungicidal activity of the lectin. We evaluated the interaction of Helja with the cell wall mannans extracted from the isogenic parental strain (WT) and a glycosylation-defective C. albicans with altered cell wall phosphomannosylation (mnn4∆ null mutants) and investigated its antifungal effect. Helja exhibited stronger antifungal activity on the mutant strain, showing greater inhibition of fungal growth, loss of cell viability, morphological alteration, and formation of clusters with agglutinated cells. This differential biological activity of Helja was correlated with the biophysical parameters determined by solid phase assays and isothermal titration calorimetry, which demonstrated that the lectin established stronger interactions with the cell wall mannans of the mnn4∆ null mutant than with the WT strain. In conclusion, our results provide new evidence on the nature of the Helja molecular interactions with cell wall components, i.e. phosphomannan, and its impact on the antifungal activity. This study highlights the relevance of plant lectins in the design of effective antifungal therapies.


Sujet(s)
Antifongiques , Candida albicans , Paroi cellulaire , Antifongiques/pharmacologie , Antifongiques/composition chimique , Candida albicans/effets des médicaments et des substances chimiques , Paroi cellulaire/effets des médicaments et des substances chimiques , Paroi cellulaire/métabolisme , Lectines végétales/composition chimique , Lectines végétales/pharmacologie , Helianthus/composition chimique , Mannanes/composition chimique , Mannanes/pharmacologie , Mannanes/métabolisme , Tests de sensibilité microbienne
2.
Int J Biol Macromol ; 274(Pt 2): 133182, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-38885857

RÉSUMÉ

Glycoside hydrolase family 5 (GH5) encompasses enzymes with several different activities, including endo-1,4-ß-mannosidases. These enzymes are involved in mannan degradation, and have a number of biotechnological applications, such as mannooligosaccharide prebiotics production, stain removal and dyes decolorization, to name a few. Despite the importance of GH5 enzymes, only a few members of subfamily 7 were structurally characterized. In the present work, biochemical and structural characterization of Bacillus licheniformis GH5 mannanase, BlMan5_7 were performed and the enzyme cleavage pattern was analyzed, showing that BlMan5_7 requires at least 5 occupied subsites to perform efficient hydrolysis. Additionally, crystallographic structure at 1.3 Å resolution was determined and mannoheptaose (M7) was docked into the active site to investigate the interactions between substrate and enzyme through molecular dynamic (MD) simulations, revealing the existence of a - 4 subsite, which might explain the generation of mannotetraose (M4) as an enzyme product. Biotechnological application of the enzyme in stain removal was investigated, demonstrating that BlMan5_7 addition to washing solution greatly improves mannan-based stain elimination.


Sujet(s)
Bacillus licheniformis , Domaine catalytique , Mutagenèse dirigée , Bacillus licheniformis/enzymologie , Bacillus licheniformis/génétique , Cristallographie aux rayons X , Simulation de dynamique moléculaire , Mannosidases/composition chimique , Mannosidases/génétique , Mannosidases/métabolisme , Spécificité du substrat , Hydrolyse , Tétroses/composition chimique , Tétroses/métabolisme , Protéines bactériennes/composition chimique , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Conformation des protéines , Mannanes/composition chimique , Mannanes/métabolisme , beta-Mannosidase/composition chimique , beta-Mannosidase/génétique , beta-Mannosidase/métabolisme , Modèles moléculaires , Simulation de docking moléculaire , Oligosaccharides
3.
Acta Crystallogr D Struct Biol ; 78(Pt 11): 1358-1372, 2022 Nov 01.
Article de Anglais | MEDLINE | ID: mdl-36322419

RÉSUMÉ

Glycoside hydrolase family 5 (GH5) harbors diverse substrate specificities and modes of action, exhibiting notable molecular adaptations to cope with the stereochemical complexity imposed by glycosides and carbohydrates such as cellulose, xyloglucan, mixed-linkage ß-glucan, laminarin, (hetero)xylan, (hetero)mannan, galactan, chitosan, N-glycan, rutin and hesperidin. GH5 has been divided into subfamilies, many with higher functional specificity, several of which have not been characterized to date and some that have yet to be discovered with the exploration of sequence/taxonomic diversity. In this work, the current GH5 subfamily inventory is expanded with the discovery of the GH5_57 subfamily by describing an endo-ß-mannanase (CapGH5_57) from an uncultured Bacteroidales bacterium recovered from the capybara gut microbiota. Biochemical characterization showed that CapGH5_57 is active on glucomannan, releasing oligosaccharides with a degree of polymerization from 2 to 6, indicating it to be an endo-ß-mannanase. The crystal structure, which was solved using single-wavelength anomalous diffraction, revealed a massively redesigned catalytic interface compared with GH5 mannanases. The typical aromatic platforms and the characteristic α-helix-containing ß6-α6 loop in the positive-subsite region of GH5_7 mannanases are absent in CapGH5_57, generating a large and open catalytic interface that might favor the binding of branched substrates. Supporting this, CapGH5_57 contains a tryptophan residue adjacent and perpendicular to the cleavage site, indicative of an anchoring site for a substrate with a substitution at the -1 glycosyl moiety. Taken together, these results suggest that despite presenting endo activity on glucomannan, CapGH5_57 may have a new type of substituted heteromannan as its natural substrate. This work demonstrates the still great potential for discoveries regarding the mechanistic and functional diversity of this large and polyspecific GH family by unveiling a novel catalytic interface sculpted to recognize complex heteromannans, which led to the establishment of the GH5_57 subfamily.


Sujet(s)
Glycosidases , beta-Mannosidase , Glycosidases/composition chimique , beta-Mannosidase/composition chimique , beta-Mannosidase/métabolisme , Mannanes/composition chimique , Mannanes/métabolisme , Spécificité du substrat , Catalyse
4.
J Biol Chem ; 295(15): 5012-5021, 2020 04 10.
Article de Anglais | MEDLINE | ID: mdl-32139511

RÉSUMÉ

ß-Mannanases from the glycoside hydrolase 26 (GH26) family are retaining hydrolases that are active on complex heteromannans and whose genes are abundant in rumen metagenomes and metatranscriptomes. These enzymes can exhibit distinct modes of substrate recognition and are often fused to carbohydrate-binding modules (CBMs), resulting in a molecular puzzle of mechanisms governing substrate preference and mode of action that has not yet been pieced together. In this study, we recovered a novel GH26 enzyme with a CBM35 module linked to its N terminus (CrMan26) from a cattle rumen metatranscriptome. CrMan26 exhibited a preference for galactomannan as substrate and the crystal structure of the full-length protein at 1.85 Å resolution revealed a unique orientation of the ancillary domain relative to the catalytic interface, strategically positioning a surface aromatic cluster of the ancillary domain as an extension of the substrate-binding cleft, contributing to galactomannan preference. Moreover, systematic investigation of nonconserved residues in the catalytic interface unveiled that residues Tyr195 (-3 subsite) and Trp234 (-5 subsite) from distal negative subsites have a key role in galactomannan preference. These results indicate a novel and complex mechanism for substrate recognition involving spatially remote motifs, distal negative subsites from the catalytic domain, and a surface-associated aromatic cluster from the ancillary domain. These findings expand our molecular understanding of the mechanisms of substrate binding and recognition in the GH26 family and shed light on how some CBMs and their respective orientation can contribute to substrate preference.


Sujet(s)
Mannanes/métabolisme , Mannosidases/composition chimique , Mannosidases/métabolisme , Métagénome , Mutation , Rumen/métabolisme , Séquence d'acides aminés , Animaux , Catalyse , Domaine catalytique , Bovins , Cristallographie aux rayons X , Galactose/analogues et dérivés , Hydrolyse , Mannosidases/génétique , Modèles moléculaires , Mutagenèse dirigée , Phylogenèse , Liaison aux protéines , Similitude de séquences , Spécificité du substrat
5.
Phytochemistry ; 159: 90-101, 2019 Mar.
Article de Anglais | MEDLINE | ID: mdl-30605853

RÉSUMÉ

The main polysaccharide of the gel present in the leaves of or Aloe vera Burm.F., (Aloe barbadensis Miller) a xerophytic crassulacean acid metabolism (CAM) plant, is an acetylated glucomannan named acemannan. This polysaccharide is responsible for the succulence of the plant, helping it to retain water. In this study we determined using polysaccharide analysis by carbohydrate gel electrophoresis (PACE) that the acemannan is a glucomannan without galactose side branches. We also investigated the expression of the gene responsible for acemannan backbone synthesis, encoding a glucomannan mannosyltransferase (GMMT, EC 2.4.1.32), since there are no previous reports on GMMT expression under water stress in general and specifically in Aloe vera. It was found by in silico analyses that the GMMT gene belongs to the cellulose synthase-like A type-9 (CSLA9) subfamily. Using RT-qPCR it was found that the expression of GMMT increased significantly in Aloe vera plants subjected to water stress. This expression correlates with an increase of endogenous ABA levels, suggesting that the gene expression could be regulated by ABA. To corroborate this hypothesis, exogenous ABA was applied to non-water-stressed plants, resulting in a significant increase of GMMT expression after 48 h of ABA treatment.


Sujet(s)
Acide abscissique/pharmacologie , Aloe/génétique , Régulation de l'expression des gènes codant pour des enzymes/effets des médicaments et des substances chimiques , Régulation de l'expression des gènes végétaux/effets des médicaments et des substances chimiques , Gènes de plante , Mannanes/métabolisme , Methyltransferases/génétique , Stress physiologique , Eau/métabolisme , Aloe/enzymologie , Aloe/métabolisme , Séquence d'acides aminés , Séquence nucléotidique , Domaine catalytique , ADN complémentaire/génétique , Sécheresses , Électrophorèse sur gel d'amidon/méthodes , Chromatographie gazeuse-spectrométrie de masse , Methyltransferases/composition chimique , Methyltransferases/métabolisme , Similitude de séquences d'acides aminés
6.
Appl Microbiol Biotechnol ; 103(2): 535-547, 2019 Jan.
Article de Anglais | MEDLINE | ID: mdl-30426153

RÉSUMÉ

Heteropolymers of mannan are polysaccharide components of the plant cell wall of gymnosperms and some angiosperms, including palm trees (Arecales and Monocot). Degradation of the complex structure of these polysaccharides requires the synergistic action of enzymes that disrupt the internal carbon skeleton of mannan and accessory enzymes that remove side chain substituents. However, complete degradation of these polysaccharides is carried out by an exo-hydrolase termed ß-mannosidase. Microbial ß-mannosidases belong to families 1, 2, and 5 of glycosyl hydrolases, and catalyze the hydrolysis of non-reducing ends of mannose oligomers. Besides, these enzymes are also involved in transglycosylation reactions. Because of their activity at different temperatures and pH values, these enzymes are used in a variety of industrial applications and the pharmaceutical, food, and biofuel industries.


Sujet(s)
Biotechnologie/méthodes , Mannanes/métabolisme , Mannosidases/métabolisme , Cycadopsida/composition chimique , Concentration en ions d'hydrogène , Hydrolyse , Magnoliopsida/composition chimique , Température
7.
J Agric Food Chem ; 65(46): 10029-10039, 2017 Nov 22.
Article de Anglais | MEDLINE | ID: mdl-29072072

RÉSUMÉ

The nutraceutical properties of Aloe vera have been attributed to a glucomannan known as acemannan. Recently information has been published about the presence of fructans in Aloe vera but there are no publications about acemannan and fructans as prebiotic compounds. This study investigated in vitro the prebiotic properties of these polysaccharides. Our results demonstrated that fructans from Aloe vera induced bacterial growth better than inulin (commercial FOS). Acemannan stimulated bacterial growth less than fructans, and as much as commercial FOS. Using qPCR to study the bacterial population of human feces fermented in a bioreactor simulating colon conditions, we found that fructans induce an increase in the population of Bifidobacterium spp. Fructans produced greater amounts of short chain fatty acids (SCFA), while the branched-chain fatty acids (BCFA) did not increase with these polysaccharides. Acemannan increased significantly acetate concentrations. Therefore, both Aloe vera polysaccharides have prebiotic potentials.


Sujet(s)
Aloe/composition chimique , Fructanes/métabolisme , Mannanes/métabolisme , Extraits de plantes/métabolisme , Prébiotiques/analyse , Aloe/métabolisme , Bifidobacterium/croissance et développement , Bifidobacterium/métabolisme , Acides gras volatils/métabolisme , Fermentation , Fructanes/analyse , Lactobacillus/croissance et développement , Lactobacillus/métabolisme , Mannanes/analyse , Extraits de plantes/analyse
8.
J Appl Microbiol ; 122(5): 1333-1347, 2017 May.
Article de Anglais | MEDLINE | ID: mdl-28256031

RÉSUMÉ

AIMS: This study used high-throughput sequencing to evaluate the intestinal microbiome dynamics in rainbow trout (Oncorhynchus mykiss) fed commercial diets supplemented with either pre- or probiotics (0·6% mannan-oligosaccharides and 0·5% Saccharomyces cerevisiae respectively) or the mixture of both. METHODS AND RESULTS: A total of 57 fish whole intestinal mucosa and contents bacterial communities were characterized by high-throughput sequencing and analysis of the V3-V4 region of the 16S rRNA gene, as well as the relationship between plasma biochemical health indicators and microbiome diversity. This was performed at 7, 14 and 30 days after start feeding functional diets, and microbiome diversity increased when fish fed functional diets after 7 days and it was positively correlated with plasma cholesterol levels. Dominant phyla were, in descending order, Proteobacteria, Firmicutes, Actinobacteria, Acidobacteria, Bacteroidetes and Fusobacteria. However, functional diets reduced the abundance of Gammaproteobacteria to favour abundances of organisms from Firmicutes and Fusobacteria, two phyla with members that confer beneficial effects. A dynamic shift of the microbiome composition was observed with changes after 7 days of feeding and the modulation by functional diets tend to cluster the corresponding groups apart from CTRL group. The core microbiome showed an overall stability with functional diets, except genus such as Escherichia-Shigella that suffered severe reductions on their abundances when feeding any of the functional diets. CONCLUSIONS: Functional diets based on pre- or probiotics dynamically modulate intestinal microbiota of juvenile trout engaging taxonomical abundance shifts that might impact fish physiological performance. SIGNIFICANCE AND IMPACT OF THE STUDY: This study shows for the first time the microbiome modulation dynamics by functional diets based on mannan-oligosaccharides and S. cerevisiae and their synergy using culture independent high-throughput sequencing technology, revealing the complexity behind the dietary modulation with functional feeds in aquatic organisms.


Sujet(s)
Aliment pour animaux/microbiologie , Bactéries/isolement et purification , Microbiome gastro-intestinal , Oligosaccharides/administration et posologie , Oncorhynchus mykiss/microbiologie , Prébiotiques/administration et posologie , Probiotiques/administration et posologie , Saccharomyces cerevisiae/physiologie , Aliment pour animaux/analyse , Animaux , Aquaculture , Bactéries/classification , Bactéries/génétique , Compléments alimentaires/analyse , Muqueuse intestinale/microbiologie , Mannanes/métabolisme , Oncorhynchus mykiss/croissance et développement , Probiotiques/métabolisme , ARN ribosomique 16S/génétique , Saccharomyces cerevisiae/génétique , Saccharomyces cerevisiae/isolement et purification
9.
Nutrients ; 9(3)2017 Mar 03.
Article de Anglais | MEDLINE | ID: mdl-28273797

RÉSUMÉ

Studies have reported a positive effect of prebiotics on the bioavailability of iron. This study evaluated the effect of partially hydrolyzed guar gum (PHGG) on iron absorption mechanisms in anemic rats. Male Wistar rats were fed 75g American Institute of Nutrition Rodent Diets for growth, pregnancy and lactation (AIN93-G) without iron for three weeks in order to induce iron deficiency anemia. Then they were fed a control diet (n = 12; without fiber) or a diet with 7.5% of PHGG (n = 12), both without iron. Food intake, body growth and the feed efficiency coefficient (FEC) were measured. The animals were euthanized after two weeks of treatment. The weight of the organs, the pH of the cecal content, and the hepatic iron and ferroportin expression in the cecum, duodenum, and liver were assessed. The intake of PHGG reduced food intake without affecting body growth, and there was a difference between the groups regarding the FEC (p = 0.026), with the highest value found in the PHGG group. The weight of the cecal content increased (p ≤ 0.001) and the pH of the cecal content was significantly lower in the PHGG group. The intake of PHGG significantly increased ferroportin expression in the cecum; however, the difference was not significant in the duodenum and the liver. PHGG seems to have a positive influence on iron absorption through transporter expression, and structural and physiological changes in the colon of anemic growing animals.


Sujet(s)
Anémie par carence en fer/diétothérapie , Transporteurs de cations/biosynthèse , Caecum/métabolisme , Modèles animaux de maladie humaine , Galactanes/usage thérapeutique , Muqueuse intestinale/métabolisme , Mannanes/usage thérapeutique , Gommes végétales/usage thérapeutique , Prébiotiques , Anémie par carence en fer/sang , Anémie par carence en fer/métabolisme , Anémie par carence en fer/anatomopathologie , Animaux , Marqueurs biologiques/sang , Transporteurs de cations/métabolisme , Caecum/anatomopathologie , Côlon/métabolisme , Côlon/anatomopathologie , Ration calorique , Galactanes/effets indésirables , Galactanes/métabolisme , Hydrolyse , Absorption intestinale , Muqueuse intestinale/anatomopathologie , Fer/métabolisme , Fer alimentaire/métabolisme , Foie/métabolisme , Foie/anatomopathologie , Mâle , Mannanes/effets indésirables , Mannanes/métabolisme , Taille d'organe , Spécificité d'organe , Gommes végétales/effets indésirables , Gommes végétales/métabolisme , Prébiotiques/effets indésirables , Rat Wistar , Prise de poids
10.
J Chromatogr B Analyt Technol Biomed Life Sci ; 1012-1013: 204-10, 2016 Feb 15.
Article de Anglais | MEDLINE | ID: mdl-26849187

RÉSUMÉ

The adsorption kinetics of chymotrypsin, a pancreatic serine protease, onto an alginate-gum guar matrix cross-linked with epichlorohydrin has been performed using a batch-adsorption technique. The effect of various experimental parameters such as pH, salt presence, contact time and temperature were investigated. The pseudo-first-order and pseudo-second-order kinetic models were used to describe the kinetic data which shows that the adsorption of the enzyme followed the pseudo-second-order rate expression. The Langmuir, Freundlich and Hill adsorption isotherm models were applied to describe the equilibrium isotherms, and the isotherm constants were determined. It was found that Hill model was more suitable for our data because the isotherm data showed a sigmoidal behavior with the free enzyme concentration increasing in equilibrium. At 8°C and at pH 5.0, 1g hydrate matrix adsorbed about 7mg of chymotrypsin. In the desorption process 80% of the biological activity of chymotrypsin was recovered under the condition of 50mM phosphate buffer, pH 7.00-500mM NaCl. When successive cycles of adsorption/washing/desorption were performed, it was observed that the matrix remained functional until the fourth cycle of repeated batch enzyme adsorption. These results are important in terms of diminishing of cost and waste generation.


Sujet(s)
Chymotrypsine/composition chimique , Chymotrypsine/métabolisme , Galactanes/composition chimique , Galactanes/métabolisme , Mannanes/composition chimique , Mannanes/métabolisme , Gommes végétales/composition chimique , Gommes végétales/métabolisme , Adsorption , Cinétique , Thermodynamique
11.
Benef Microbes ; 7(1): 119-133, 2016 Feb.
Article de Anglais | MEDLINE | ID: mdl-26615853

RÉSUMÉ

The aim of this study was to evaluate the assimilation of the prebiotics fructooligosaccharides (FOS), galactooligosaccharides (GOS), and Konjac glucomannan oligosaccharides (KGMO) by three human (H1, H2 and H3) and pig (P1, P2 and P3) faecal microbiotas in the presence of the potentially probiotic strain Lactobacillus amylovorus DSM 16698, using an in vitro batch fermentation model. Total bacteria and L. amylovorus populations were quantified using qPCR and biochemical features (pH, production of short chain fatty acids (SCFA), lactate, ammonia, and carbohydrate assimilation) were determined. L. amylovorus did not have a competitive advantage under in vitro conditions, reflected by its reduced relative abundance during fermentation despite the carbohydrate sources added. Pig microbiota sustained more stable probiotic counts. Intermittently produced lactate was possibly assimilated by the microbiota and converted to other SCFA as the carbohydrates were assimilated, with H3 probably having a methanogenic metabolism with high lactate and acetate consumption except in the presence of FOS, which assimilation resulted in the highest total SCFA for this volunteer. Addition of FOS also resulted in lower pH and ammonia, which might have been used as nitrogen source by pig microbiota. KGMO needed longer fermentation periods to be completely assimilated by both human and porcine faecal microbiotas. Overall, our results reinforce the notion that care must be taken when generalising the effects claimed for a given probiotic or potentially probiotic strain, including the combination with different prebiotic substrates, since they may vary considerably among individuals, which is important when studying potentially pro- and prebiotic combinations for application as functional foods and feed ingredients.


Sujet(s)
Hydrates de carbone alimentaires/métabolisme , Microbiome gastro-intestinal , Lactobacillus acidophilus/métabolisme , Prébiotiques , Animaux , Chromatographie d'échange d'ions , Acides gras volatils/métabolisme , Fèces/microbiologie , Fermentation , Fructose/métabolisme , Galactose/métabolisme , Humains , Concentration en ions d'hydrogène , Mannanes/métabolisme , Oligosaccharides/métabolisme , Suidae
12.
Insect Biochem Mol Biol ; 67: 94-104, 2015 Dec.
Article de Anglais | MEDLINE | ID: mdl-26187253

RÉSUMÉ

α-Mannosidases are enzymes which remove non-reducing terminal residues from glycoconjugates. Data on both GH47 and GH38 (Golgi and lysosomal) enzymes are available. Data on insect midgut α-mannosidases acting in digestion are preliminary and do not include enzyme sequences. Tenebrio molitor midgut α-mannosidases were separated by chromatography into two activity peaks: a major (Man1) and a minor (Man2). An antibody generated against a synthetic peptide corresponding to a sequence of α-mannosidase fragment recognizes Man2 but not Man1. That fragment was later found to correspond to TmMan2 (GenBank access KP892646), showing that the cDNA coding for Man2 is actually TmMan2. TmMan2 codes for a mature α-mannosidase with 107.5 kDa. Purified Man2 originates after SDS-PAGE one band of about 72 kDa and another of 51 kDa, which sums 123 kDa, in agreement with gel filtration (123 kDa) data. These results suggest that Man2 is processed into peptides that remain noncovalently linked within the functional enzyme. The physical and kinetical properties of purified Man1 and Man2 are similar. They have a molecular mass of 123 kDa (gel filtration), pH optimum (5.6) and response to inhibitors like swainsonine (Man1 Ki, 68 nM; Man2 Ki, 63 nM) and deoxymannojirimycin (Man1 Ki, 0.12 mM; Man2 Ki, 0.15 mM). Their substrate specificities are a little different as Man2 hydrolyzes α-1,3 and α-1,6 bonds better than α-1,2, whereas the contrary is true for Man1. Thus, they pertain to Class II (GH38 α-mannosidases), that are catabolic α-mannosidases similar to lysosomal α-mannosidase. However, Man2, in contrast to true lysosomal α-mannosidase, is secreted (immunocytolocalization data) into the midgut contents. There, Man2 may participate in digestion of fungal cell walls, known to have α-mannosides in their outermost layer. The amount of family 38 α-mannosidase sequences found in the transcriptome (454 pyrosequencing) of the midgut of 9 insects pertaining to 5 orders is perhaps related to the diet of these organisms, as suggested by a large number of lysosomal α-mannosidase in the T. molitor midgut.


Sujet(s)
Protéines d'insecte/composition chimique , Tenebrio/enzymologie , alpha-Mannosidase/composition chimique , Animaux , Femelle , Tube digestif/enzymologie , Protéines d'insecte/isolement et purification , Cinétique , Larve/enzymologie , Mâle , Mannanes/métabolisme , Spécificité du substrat , Tenebrio/génétique , alpha-Mannosidase/isolement et purification
13.
Int J Syst Evol Microbiol ; 64(Pt 4): 1166-1172, 2014 Apr.
Article de Anglais | MEDLINE | ID: mdl-24408531

RÉSUMÉ

A novel bacterial strain, CMG1240(T), was isolated in 1988 from mixed soil samples collected from the United States and South America in a selective enrichment medium with guar gum as the sole carbon source. This microbial isolate showed ß-mannanolytic activity to hydrolyse the galactomannans present in guar gum. Strain CMG1240(T) was aerobic, Gram-stain-variable, non-motile, rod-shaped and endospore-forming. It was further examined based on a combination of phenotypic, physiological and genetic characterization. On the basis of 16S rRNA gene sequence similarity, cellular lipid profile and fatty acid composition, strain CMG1240(T) was shown to belong unequivocally to the genus Paenibacillus. Quinone analysis showed that MK-7 was the only menaquinone detected. The main cell-wall sugar was xylose with trace amounts of mannose and glucose. The major polar lipids were diphosphatidylglycerol, phosphatidylglycerol, phosphatidylethanolamine, and unknown glycolipids, phospholipids, phosphoglycolipids and other lipids. The peptidoglycan structure was A1γ (meso-diaminopimelic acid-direct). The major fatty acids were anteiso-C15 : 0 and C16 : 0. The DNA G+C content was 46 mol% as determined experimentally and by analysis of the genomic sequence. The 16S rRNA gene sequence of strain CMG1240(T) shared highest similarity with that of Paenibacillus fonticola ZL(T) (97.6 %) while all other tested Paenibacillus strains showed lower sequence similarities (≤95.3 %). The results of DNA-DNA hybridization and chemotaxonomic tests enabled the genotypic and phenotypic differentiation of strain CMG1240(T) from P. fonticola. Based on these results, strain CMG1240(T) ( = ATCC BAA-2594(T) = DSM 25539(T)) should be designated the type strain of a novel species within the genus Paenibacillus, for which the name Paenibacillus lentus sp. nov. is proposed.


Sujet(s)
Mannanes/métabolisme , Paenibacillus/classification , Phylogenèse , Microbiologie du sol , Techniques de typage bactérien , Composition en bases nucléiques , ADN bactérien/génétique , Acides gras/composition chimique , Galactanes , Données de séquences moléculaires , Hybridation d'acides nucléiques , Paenibacillus/génétique , Paenibacillus/isolement et purification , Peptidoglycane/composition chimique , Phospholipides/composition chimique , Gommes végétales , ARN ribosomique 16S/génétique , Analyse de séquence d'ADN , Amérique du Sud , États-Unis , Vitamine K2/analogues et dérivés , Vitamine K2/composition chimique
14.
BMC Res Notes ; 6: 333, 2013 Aug 22.
Article de Anglais | MEDLINE | ID: mdl-23965285

RÉSUMÉ

BACKGROUND: The study of coffee polysaccharides-degrading enzymes from the coffee berry borer Hypothenemus hampei, has become an important alternative in the identification for enzymatic inhibitors that can be used as an alternative control of this dangerous insect. We report the cloning, expression and biochemical characterization of a mannanase gene that was identified in the midgut of the coffee berry borer and is responsible for the degradation of the most abundant polysaccharide in the coffee bean. METHODS: The amino acid sequence of HhMan was analyzed by multiple sequence alignment comparisons with BLAST (Basic Local Alignment Search Tool) and CLUSTALW. A Pichia pastoris expression system was used to express the recombinant form of the enzyme. The mannanase activity was quantified by the 3,5-dinitrosalicylic (DNS) and the hydrolitic properties were detected by TLC. RESULTS: An endo-1,4-ß-mannanase from the digestive tract of the insect Hypothenemus hampei was cloned and expressed as a recombinant protein in the Pichia pastoris system. This enzyme is 56% identical to the sequence of an endo-ß-mannanase from Bacillus circulans that belongs to the glycosyl hydrolase 5 (GH5) family. The purified recombinant protein (rHhMan) exhibited a single band (35.5 kDa) by SDS-PAGE, and its activity was confirmed by zymography. rHhMan displays optimal activity levels at pH 5.5 and 30°C and can hydrolyze galactomannans of varying mannose:galactose ratios, suggesting that the enzymatic activity is independent of the presence of side chains such as galactose residues. The enzyme cannot hydrolyze manno-oligosaccharides such as mannobiose and mannotriose; however, it can degrade mannotetraose, likely through a transglycosylation reaction. The K(m) and k(cat) values of this enzyme on guar gum were 2.074 mg ml(-1) and 50.87 s(-1), respectively, which is similar to other mannanases. CONCLUSION: This work is the first study of an endo-1,4-ß-mannanase from an insect using this expression system. Due to this enzyme's importance in the digestive processes of the coffee berry borer, this study may enable the design of inhibitors against endo-1,4-ß-mannanase to decrease the economic losses stemming from this insect.


Sujet(s)
Clonage moléculaire , Café/parasitologie , Protéines d'insecte/métabolisme , Mannosidases/métabolisme , Charançons/enzymologie , Séquence d'acides aminés , Animaux , Chromatographie sur couche mince , Clonage moléculaire/méthodes , Électrophorèse sur gel de polyacrylamide , Fruit , Galactanes/métabolisme , Galactose/analogues et dérivés , Interactions hôte-parasite , Concentration en ions d'hydrogène , Hydrolyse , Protéines d'insecte/génétique , Protéines d'insecte/isolement et purification , Cinétique , Mannanes/métabolisme , Mannosidases/génétique , Mannosidases/isolement et purification , Masse moléculaire , Oligosaccharides/métabolisme , Pichia/génétique , Gommes végétales/métabolisme , Protéines recombinantes/métabolisme , Analyse de séquence d'ADN , Spécificité du substrat , Charançons/génétique
15.
Appl Microbiol Biotechnol ; 97(1): 123-33, 2013 Jan.
Article de Anglais | MEDLINE | ID: mdl-22820522

RÉSUMÉ

The interest upon products obtained from fungi has increased during the recent years. Among the most noticeable, nutraceuticals, enzymes, and natural drugs occupy a privileged position. Fungal biomass for the obtainment of those products can be produced either by solid-state fermentation (SSF) or submersed fermentation. SSF has been employed for the production of spawn on pretreated wheat grains with the objective of increasing the fungal polysaccharide (glucomannans) contents. Among the important factors for the production of spawn, time of cooking, time of resting after grain cooking, consequently grain moisture, substrate pH, temperature of incubation, and initial inoculum amount are among the most significant. For wheat grains, cooking time of 21 min followed by a 24-min resting time has been shown as optimal for the production of glucomannans by the fungus Agaricus subrufescens (=Agaricus brasiliensis). Amendments of CaSO(4) (up to 3 %) and CaCO(3) (up to 1 %) had an important influence on the substrate pH. In general, better results for glucomannan production were obtained when no supplement was added or when up to 0.25 % CaCO(3) (pH 6.6) has been added to the mix. Our results demonstrate that the inoculum amount necessary for the best polysaccharide levels is around 10.3 %, while the best temperature is around 27.2 °C. Besides using the spawn for its main purpose, it could potentially and alternatively be used as nutraceutical due to the high levels of glucomannan observed (6.89 %), a compound technically proven to be a potent immunostimulatory and antitumoral agent.


Sujet(s)
Agaricus/métabolisme , Mannanes/métabolisme , Triticum/métabolisme , Carbonate de calcium/métabolisme , Sulfate de calcium/métabolisme , Milieux de culture/composition chimique , Fermentation , Concentration en ions d'hydrogène , Température , Facteurs temps
16.
Carbohydr Res ; 356: 260-4, 2012 Jul 15.
Article de Anglais | MEDLINE | ID: mdl-22507831

RÉSUMÉ

Pseudallescheria boydii is an opportunistic fungus widespread in the environment, and has recently emerged as an agent of localized as well as disseminated infections in both immunocompromised and immunocompetent hosts. The host response to fungi is in part dependent on the activation of evolutionary conserved receptors including Toll-like receptors and phagocytic receptors. This review will discuss the isolation and structural characterization of α-glucans and rhamnomannans from P. boydii cell wall and their roles in the induction of innate immune response.


Sujet(s)
Glucanes/métabolisme , Mannanes/métabolisme , Pseudallescheria/composition chimique , Scedosporium/composition chimique , Récepteur de type Toll-2/métabolisme , Récepteur de type Toll-4/métabolisme , Paroi cellulaire/composition chimique , Paroi cellulaire/immunologie , Glucanes/composition chimique , Glucanes/isolement et purification , Humains , Immunité innée , Macrophages/immunologie , Macrophages/métabolisme , Mannanes/composition chimique , Mannanes/isolement et purification , Monocytes/immunologie , Monocytes/métabolisme , Mycoses/immunologie , Mycoses/microbiologie , Pseudallescheria/immunologie , Scedosporium/immunologie , Récepteur de type Toll-2/immunologie , Récepteur de type Toll-4/immunologie
17.
Proc Natl Acad Sci U S A ; 109(11): 4197-202, 2012 Mar 13.
Article de Anglais | MEDLINE | ID: mdl-22371593

RÉSUMÉ

Horizontal gene transfer (HGT) involves the nonsexual transmission of genetic material across species boundaries. Although often detected in prokaryotes, examples of HGT involving animals are relatively rare, and any evolutionary advantage conferred to the recipient is typically obscure. We identified a gene (HhMAN1) from the coffee berry borer beetle, Hypothenemus hampei, a devastating pest of coffee, which shows clear evidence of HGT from bacteria. HhMAN1 encodes a mannanase, representing a class of glycosyl hydrolases that has not previously been reported in insects. Recombinant HhMAN1 protein hydrolyzes coffee berry galactomannan, the major storage polysaccharide in this species and the presumed food of H. hampei. HhMAN1 was found to be widespread in a broad biogeographic survey of H. hampei accessions, indicating that the HGT event occurred before radiation of the insect from West Africa to Asia and South America. However, the gene was not detected in the closely related species H. obscurus (the tropical nut borer or "false berry borer"), which does not colonize coffee beans. Thus, HGT of HhMAN1 from bacteria represents a likely adaptation to a specific ecological niche and may have been promoted by intensive agricultural practices.


Sujet(s)
Adaptation biologique/génétique , Coffea/parasitologie , Coléoptères/génétique , Transfert horizontal de gène/génétique , Gènes bactériens/génétique , Espèce introduite , Animaux , ADN/génétique , Cellules eucaryotes/métabolisme , Fruit/parasitologie , Galactose/analogues et dérivés , Tube digestif/enzymologie , Gènes d'insecte/génétique , Géographie , Hydrolyse , Protéines d'insecte/génétique , Protéines d'insecte/métabolisme , Mannanes/métabolisme , Mannosidases/métabolisme , Données de séquences moléculaires , Mutagenèse par insertion , Phylogenèse , Protéines recombinantes/métabolisme
18.
Int Immunopharmacol ; 12(2): 378-83, 2012 Feb.
Article de Anglais | MEDLINE | ID: mdl-22207010

RÉSUMÉ

The activities of dectin-1 and mannose receptors on phagocytosis of Candida albicans and the production of TNF-α by macrophages from mice pretreated for 3 days with extract of Artocarpus intergrifolia seeds (jack extract), Artin M or jacalin were studied. Macrophages from these mice were coincubated with C. albicans CR15 (yeast), in the presence of mannose (50mM) plus mannan (100 µg) or laminarin (1mg). Phagocytosis was significantly enhanced to 52% in macrophages from mice pretreated intraperitoneally for 3 days with jack extract (500 µg/250 µl PBS). Reduction in phagocytosis from 52% to 34% (P<0.05) occurred in the presence of mannose receptor inhibitors and from 52% to 16% (P<0.01) in the presence of dectin-1 inhibitor laminarin, whereas only 20% of control macrophages phagocytosed blastoconidia. Similar results were verified for pretreatment of mice with Artin M (2.5 µg/250 µl PBS), but not for jacalin (25 µg/250 µl PBS). Macrophages from mice pretreated 3 days previously with jack extract or Artin M and then coincubated for 2h with C. albicans presented a significant increase in TNF-α production, correlating with significantly less transition of yeast to filamentous forms compared to pretreatment with jacalin. These results suggest that Artin M, but not jacalin present in jack extract significantly increased TNF-α production and the activity of mannose and dectin-1 receptors.


Sujet(s)
Artocarpus/composition chimique , Candida albicans/immunologie , Lectines de type C/métabolisme , Macrophages/effets des médicaments et des substances chimiques , Lectines liant le mannose/métabolisme , Phagocytose/effets des médicaments et des substances chimiques , Lectines végétales/pharmacologie , Récepteurs de surface cellulaire/métabolisme , Facteur de nécrose tumorale alpha/biosynthèse , Animaux , Glucanes , Macrophages/immunologie , Macrophages/métabolisme , Mannanes/métabolisme , Mannose/métabolisme , Récepteur du mannose , Souris , Lectines végétales/composition chimique , Lectines végétales/immunologie , Polyosides/métabolisme , Graines/composition chimique , Facteur de nécrose tumorale alpha/métabolisme
19.
Appl Biochem Biotechnol ; 166(1): 197-207, 2012 Jan.
Article de Anglais | MEDLINE | ID: mdl-22057908

RÉSUMÉ

Agar is a complex mixture of gel-forming polysaccharides. Gelling agents are very often used to provide proper support for plants grown in semisolid culture media. And agar is the most frequently used gelling agent in plant tissue culture media. Galactomannans, another group of gel-forming polysaccharides, consists of a (1 → 4)-linked ß-D: -mannopyranosyl backbone partially substituted at O-6 with D: -galactopyranosyl side groups. In this work, we demonstrate that a statistically significant 2.7-fold increase on the multiplication rate (MR) for in vitro-grown Marubakaido (Malus prunifolia) shoots was associated with a 12.5% replacement of agar in the semi-solid culture media for a galactomannan obtained from seeds of Schizolobium paraybae. This increase on MR was due mainly to a 1.9-fold increase in the number of main branches and an 8.6-fold increase in the number of primary lateral branches. Gas liquid chromatography and thin layer chromatography analyzes demonstrated that the galactomannan-driven enhancement of the in vitro multiplication rate of the Marubakaido apple rootstock was not related to the galactomannan degradation. To the best of our knowledge, this is the first report on the successful use of partial replacement of high quality agar by a galactomannan from S. paraybae in a micropropagation system for a tree species.


Sujet(s)
Fabaceae/composition chimique , Mannanes/composition chimique , Polyosides/composition chimique , Agar-agar/composition chimique , Galactose/analogues et dérivés , Malus/cytologie , Malus/croissance et développement , Mannanes/métabolisme , Racines de plante/cytologie , Racines de plante/croissance et développement , Pousses de plante/cytologie , Pousses de plante/croissance et développement , Polyosides/métabolisme , Graines/composition chimique , Techniques de culture de tissus
20.
Phytochemistry ; 72(18): 2352-60, 2011 Dec.
Article de Anglais | MEDLINE | ID: mdl-21955619

RÉSUMÉ

Primary cell walls from plants are composites of cellulose tethered by cross-linking glycans and embedded in a matrix of pectins. Cell wall composition varies between plant species, reflecting in some instances the evolutionary distance between them. In this work the monosaccharide compositions of isolated primary cell walls of nine fern species and one lycophyte were characterized and compared with those from Equisetum and an angiosperm dicot. The relatively high abundance of mannose in these plants suggests that mannans may constitute the major cross-linking glycan in the primary walls of pteridophytes and lycophytes. Pectin-related polysaccharides contained mostly rhamnose and uronic acids, indicating the presence of rhamnogalacturonan I highly substituted with galactose and arabinose. Structural and fine-structural analyses of the hemicellulose fraction of leaves of Adiantum raddianum confirmed this hypothesis. Linkage analysis showed that the mannan contains mostly 4-Man with very little 4,6-Man, indicating a low percentage of branching with galactose. Treatment of the mannan-rich fractions with endo-ß-mannanase produced characteristic mannan oligosaccharides. Minor amounts of xyloglucan and xylans were also detected. These data and those of others suggest that all vascular plants contain xyloglucans, arabinoxylans, and (gluco)mannans, but in different proportions that define cell wall types. Whereas xyloglucan and pectin-rich walls define Type I walls of dicots and many monocots, arabinoxylans and lower proportion of pectin define the Type II walls of commelinoid monocots. The mannan-rich primary walls with low pectins of many ferns and a lycopod indicate a fundamentally different wall type among land plants, the Type III wall.


Sujet(s)
Adiantum/métabolisme , Paroi cellulaire/métabolisme , Mannanes/métabolisme , Polyosides/métabolisme , Adiantum/composition chimique , Adiantum/ultrastructure , Paroi cellulaire/composition chimique , Paroi cellulaire/ultrastructure , Fractionnement chimique , Equisetum/composition chimique , Equisetum/métabolisme , Feuilles de plante/composition chimique , Feuilles de plante/métabolisme , Feuilles de plante/ultrastructure , Polyosides/composition chimique , Selaginellaceae/composition chimique , Selaginellaceae/métabolisme
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