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1.
World J Microbiol Biotechnol ; 40(7): 232, 2024 Jun 05.
Article de Anglais | MEDLINE | ID: mdl-38834810

RÉSUMÉ

Microbially induced carbonate precipitation (MICP) has been used to cure rare earth slags (RES) containing radionuclides (e.g. Th and U) and heavy metals with favorable results. However, the role of microbial extracellular polymeric substances (EPS) in MICP curing RES remains unclear. In this study, the EPS of Lysinibacillus sphaericus K-1 was extracted for the experiments of adsorption, inducing calcium carbonate (CaCO3) precipitation and curing of RES. The role of EPS in in MICP curing RES and stabilizing radionuclides and heavy metals was analyzed by evaluating the concentration and morphological distribution of radionuclides and heavy metals, and the compressive strength of the cured body. The results indicate that the adsorption efficiencies of EPS for Th (IV), U (VI), Cu2+, Pb2+, Zn2+, and Cd2+ were 44.83%, 45.83%, 53.7%, 61.3%, 42.1%, and 77.85%, respectively. The addition of EPS solution resulted in the formation of nanoscale spherical particles on the microorganism surface, which could act as an accumulating skeleton to facilitate the formation of CaCO3. After adding 20 mL of EPS solution during the curing process (Treat group), the maximum unconfined compressive strength (UCS) of the cured body reached 1.922 MPa, which was 12.13% higher than the CK group. The contents of exchangeable Th (IV) and U (VI) in the cured bodies of the Treat group decreased by 3.35% and 4.93%, respectively, compared with the CK group. Therefore, EPS enhances the effect of MICP curing RES and reduces the potential environmental problems that may be caused by radionuclides and heavy metals during the long-term sequestration of RES.


Sujet(s)
Bacillaceae , Carbonate de calcium , Matrice de substances polymériques extracellulaires , Métaux lourds , Thorium , Uranium , Uranium/composition chimique , Uranium/métabolisme , Carbonate de calcium/composition chimique , Thorium/composition chimique , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Bacillaceae/métabolisme , Terres rares/composition chimique , Adsorption , Précipitation chimique
2.
Harmful Algae ; 135: 102633, 2024 May.
Article de Anglais | MEDLINE | ID: mdl-38830715

RÉSUMÉ

Nitrogen-fixing cyanobacteria not only cause severe blooms but also play an important role in the nitrogen input processes of lakes. The production of extracellular polymeric substances (EPS) and the ability to fix nitrogen from the atmosphere provide nitrogen-fixing cyanobacteria with a competitive advantage over other organisms. Temperature and nitrogen availability are key environmental factors in regulating the growth of cyanobacteria. In this study, Dolichospermum (formerly known as Anabaena) was cultivated at three different temperatures (10 °C, 20 °C, and 30 °C) to examine the impact of temperature and nitrogen availability on nitrogen fixation capacity and the release of EPS. Initially, confocal laser scanning microscopy (CLSM) and the quantification of heterocysts at different temperatures revealed that lower temperatures (10 °C) hindered the differentiation of heterocysts under nitrogen-deprived conditions. Additionally, while heterocysts inhibited the photosynthetic activity of Dolichospermum, the secretion of EPS was notably affected by nitrogen limitation, particularly at 30 °C. Finally, real-time quantitative polymerase chain reaction (qPCR) was used to measure the expression of nitrogen-utilizing genes (ntcA and nifH) and EPS synthesis-related genes (wzb and wzc). The results indicated that under nitrogen-deprived conditions, the expression of each gene was upregulated, and there was a significant correlation between the upregulation of nitrogen-utilizing and EPS synthesis genes (P < 0.05). Our findings suggested that Dolichospermum responded to temperature variation by affecting the formation of heterocysts, impacting its potential nitrogen fixation capacity. Furthermore, the quantity of EPS released was more influenced by nitrogen availability than temperature. This research enhances our comprehension of interconnections between nitrogen deprivation and EPS production under the different temperatures.


Sujet(s)
Matrice de substances polymériques extracellulaires , Fixation de l'azote , Azote , Température , Azote/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Anabaena/métabolisme , Anabaena/physiologie , Anabaena/génétique
3.
Appl Microbiol Biotechnol ; 108(1): 386, 2024 Jun 19.
Article de Anglais | MEDLINE | ID: mdl-38896257

RÉSUMÉ

Bacterial biofilms commonly cause chronic and persistent infections in humans. Bacterial biofilms consist of an inner layer of bacteria and an autocrine extracellular polymeric substance (EPS). Biofilm dispersants (abbreviated as dispersants) have proven effective in removing the bacterial physical protection barrier EPS. Dispersants are generally weak or have no bactericidal effect. Bacteria dispersed from within biofilms (abbreviated as dispersed bacteria) may be more invasive, adhesive, and motile than planktonic bacteria, characteristics that increase the probability that dispersed bacteria will recolonize and cause reinfection. The dispersants should be combined with antimicrobials to avoid the risk of severe reinfection. Dispersant-based nanoparticles have the advantage of specific release and intense penetration, providing the prerequisite for further antibacterial agent efficacy and achieving the eradication of biofilms. Dispersant-based nanoparticles delivered antimicrobial agents for the treatment of diseases associated with bacterial biofilm infections are expected to be an effective measure to prevent reinfection caused by dispersed bacteria. KEY POINTS: • Dispersed bacteria harm and the dispersant's dispersion mechanisms are discussed. • The advantages of dispersant-based nanoparticles in bacteria biofilms are discussed. • Dispersant-based nanoparticles for cutting off reinfection in vivo are highlighted.


Sujet(s)
Antibactériens , Biofilms , Nanoparticules , Biofilms/effets des médicaments et des substances chimiques , Biofilms/croissance et développement , Nanoparticules/composition chimique , Antibactériens/pharmacologie , Humains , Bactéries/effets des médicaments et des substances chimiques , Infections bactériennes/prévention et contrôle , Infections bactériennes/traitement médicamenteux , Infections bactériennes/microbiologie , Réinfection/prévention et contrôle , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Matrice de substances polymériques extracellulaires/effets des médicaments et des substances chimiques
4.
J Cell Mol Med ; 28(12): e18481, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38899542

RÉSUMÉ

Bacillus subtilis relies on biofilms for survival in harsh environments. Extracellular polymeric substance (EPS) is a crucial component of biofilms, yet the dynamics of EPS production in single cells remain elusive. To unveil the modulation of EPS synthesis, we built a minimal network model comprising the SinI-SinR-SlrR module, Spo0A, and EPS. Stochastic simulations revealed that antagonistic interplay between SinI and SinR enables EPS production in bursts. SlrR widens these bursts and increases their frequency by stabilizing SinR-SlrR complexes and depleting free SinR. DNA replication and chromosomal positioning of key genes dictate pulsatile changes in the slrR:sinR gene dosage ratio (gr) and Spo0A-P levels, each promoting EPS production in distinct phases of the cell cycle. As the cell cycle lengthens with nutrient stress, the duty cycle of gr pulsing decreases, whereas the amplitude of Spo0A-P pulses elevates. This coordinated response facilitates keeping a constant proportion of EPS-secreting cells within colonies across diverse nutrient conditions. Our results suggest that bacteria may 'encode' eps expression through strategic chromosomal organization. This work illuminates how stochastic protein interactions, gene copy number imbalance, and cell-cycle dynamics orchestrate EPS synthesis, offering a deeper understanding of biofilm formation.


Sujet(s)
Bacillus subtilis , Protéines bactériennes , Biofilms , Réplication de l'ADN , Régulation de l'expression des gènes bactériens , Biofilms/croissance et développement , Bacillus subtilis/génétique , Bacillus subtilis/métabolisme , Bacillus subtilis/physiologie , Réplication de l'ADN/génétique , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Cycle cellulaire/génétique
5.
Environ Sci Technol ; 58(26): 11542-11553, 2024 Jul 02.
Article de Anglais | MEDLINE | ID: mdl-38871676

RÉSUMÉ

Nanoplastics (NPs) are emerging pollutants and have been reported to cause the disintegration of anaerobic granular sludge (AnGS). However, the mechanism involved in AnGS disintegration was not clear. In this study, polyvinyl chloride nanoplastics (PVC-NPs) were chosen as target NPs and their long-term impact on AnGS structure was investigated. Results showed that increasing PVC-NPs concentration resulted in the inhibition of acetoclastic methanogens, syntrophic propionate, and butyrate degradation, as well as AnGS disintegration. At the presence of 50 µg·L-1 PVC-NPs, the hydrophobic interaction was weakened with a higher energy barrier due to the relatively higher hydrophilic functional groups in extracellular polymeric substances (EPS). PVC-NPs-induced ROS inhibited quorum sensing, significantly downregulated hydrophobic amino acid synthesis, whereas it highly upregulated the genes related to the synthesis of four hydrophilic amino acids (Cys, Glu, Gly, and Lys), resulting in a higher hydrophily degree of protein secondary structure in EPS. The differential expression of genes involved in EPS biosynthesis and the resulting protein secondary structure contributed to the greater hydrophilic interaction, reducing microbial aggregation ability. The findings provided new insight into the long-term impact of PVC-NPs on AnGS when treating wastewater containing NPs and filled the knowledge gap on the mechanism involved in AnGS disintegration by PVC-NPs.


Sujet(s)
Matrice de substances polymériques extracellulaires , Poly(chlorure de vinyle) , Eaux d'égout , Eaux d'égout/microbiologie , Poly(chlorure de vinyle)/composition chimique , Matrice de substances polymériques extracellulaires/métabolisme , Anaérobiose , Interactions microbiennes
6.
J Hazard Mater ; 473: 134434, 2024 Jul 15.
Article de Anglais | MEDLINE | ID: mdl-38762983

RÉSUMÉ

The behavior of As is closely related to trans(formation) of ferrihydrite, which often coprecipitates with extracellular polymeric substances (EPS), forming EPS-mineral aggregates in natural environments. While the effect of EPS on ferrihydrite properity, mineralogy reductive transformation, and associated As fate in sulfate-reducing bacteria (SRB)-rich environments remains unclear. In this research, ferrihydrite-EPS aggregates were synthesized and batch experiments combined with spectroscopic, microscopic, and geochemical analyses were conducted to address these knowledge gaps. Results indicated that EPS blocked micropores in ferrihydrite, and altered mineral surface area and susceptibility. Although EPS enhanced Fe(III) reduction, it retarded ferrihydrite transformation to magnetite by inhibiting Fe atom exchange in systems with low SO42-. As a result, 16% of the ferrihydrite was converted into magnetite in the Fh-0.3 treatment, and no ferrihydrite transformation occurred in the Fh-EPS-0.3 treatment. In systems with high SO42-, however, EPS promoted mackinawite formation and increased As mobilization into the solution. Additionally, the coprecipitated EPS facilitated As(V) reduction to more mobilized As(III) and decreased conversion of As into the residual phase, enhancing the potential risk of As contamination. These findings advance our understanding on biogeochemistry of elements Fe, S, and As and are helpful for accurate prediction of As behavior.


Sujet(s)
Arsenic , Matrice de substances polymériques extracellulaires , Composés du fer III , Composés du fer III/composition chimique , Arsenic/composition chimique , Arsenic/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Polluants chimiques de l'eau/composition chimique
7.
Bioresour Technol ; 403: 130856, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38763204

RÉSUMÉ

The inductive effect of conductive materials (CMs) on enhancing methanogenesis metabolism has been overlooked. Herein, we highlight role of CMs in inducing the spatial optimisation of methanogenic consortia by altering the Lewis acid-base (AB) interactions within microbial aggregates. In the presence of CMs and after their removal, the methane production and methane proportion in biogas significantly increase, with no significant difference between the two situations. Analyses of interactions between CMs and extracellular polymer substances (EPSs) with and without D2O reveal that CMs promote release and transfer potential of electron in EPSs, which induce and enhance the role of water molecules being primarily as proton acceptors in the hydrogen bonding between EPSs and water, thereby changing the electron-donor- and electron-acceptor-based AB interactions. Investigations of succession dynamics of microbial communities, co-occurrence networks, and metagenomics further indicate that electron transfer drives the microbial spatial optimisation for efficient methanogenesis through intensive interspecies interactions.


Sujet(s)
Méthane , Consortiums microbiens , Méthane/métabolisme , Transport d'électrons , Anaérobiose , Consortiums microbiens/physiologie , Électrons , Matrice de substances polymériques extracellulaires/métabolisme , Biocarburants , Conductivité électrique , Acides de Lewis
8.
Bioresour Technol ; 403: 130869, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38777236

RÉSUMÉ

In this study, the possibility of an auto-aggregating bacterium Pseudomonas strain XL-2 with heterotrophic nitrification-aerobic denitrification capacity for improving granulation and nitrogen removal was evaluated. The results showed that the supplementation of strain XL-2 promoted granulation, making R1 (experimental group with strain XL-2) dominated by granules at 14 d, which was 12 days earlier than R2 (control group without strain XL-2). This was attributed to the promotion of extracellular polymeric substances (EPS) secretion, particularly proteins by adding strain XL-2, thereby improving the hydrophobicity of sludge and altering the proteins secondary structures to facilitate aggregation. Meanwhile, adding strain XL-2 improved simultaneous nitrification and denitrification efficiency of R1. Microbial community analysis indicated that strain XL-2 successfully proliferated in aerobic granule sludge and might induce the enrichment of genera such as Flavobacterium and Paracoccus that were favorable for EPS secretion and denitrification, jointly promoting granulation and enhancing nitrogen removal efficiency.


Sujet(s)
Dénitrification , Nitrification , Azote , Pseudomonas stutzeri , Eaux d'égout , Dénitrification/physiologie , Nitrification/physiologie , Pseudomonas stutzeri/métabolisme , Aérobiose , Eaux d'égout/microbiologie , Processus hétérotrophes/physiologie , Matrice de substances polymériques extracellulaires/métabolisme , Bioréacteurs
9.
Environ Res ; 255: 119209, 2024 Aug 15.
Article de Anglais | MEDLINE | ID: mdl-38782336

RÉSUMÉ

Nitrate/nitrite-dependent anaerobic methane oxidation (n-DAMO) process is a promising wastewater treatment technology, but the slow microbial growth rate greatly hinders its practical application. Although high-level nitrogen removal and excellent biomass accumulation have been achieved in n-DAMO granule process, the formation mechanism of n-DAMO granules remains unresolved. To elucidate the role of functional microbes in granulation, this study attempted to cultivate granules dominated by n-DAMO microorganisms and granules coupling n-DAMO with anaerobic ammonium oxidation (Anammox). After long-term operation, dense granules were developed in the two systems where both n-DAMO archaea and n-DAMO bacteria were enriched, whereas granulation did not occur in the other system dominated by n-DAMO bacteria. Extracellular polymeric substances (EPS) measurement indicated the critical role of EPS production in the granulation of n-DAMO process. Metagenomic and metatranscriptomic analyses revealed that n-DAMO archaea and Anammox bacteria were active in EPS biosynthesis, while n-DAMO bacteria were inactive. Consequently, more EPS were produced in the systems containing n-DAMO archaea and Anammox bacteria, leading to the successful development of n-DAMO granules. Furthermore, EPS biosynthesis in n-DAMO systems is potentially regulated by acyl-homoserine lactones and c-di-GMP. These findings not only provide new insights into the mechanism of granule formation in n-DAMO systems, but also hint at potential strategies for management of the granule-based n-DAMO process.


Sujet(s)
Archéobactéries , Bactéries , Oxydoréduction , Archéobactéries/métabolisme , Archéobactéries/génétique , Anaérobiose , Bactéries/métabolisme , Bactéries/génétique , Méthane/métabolisme , Élimination des déchets liquides/méthodes , Nitrates/métabolisme , Composés d'ammonium/métabolisme , Nitrites/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Bioréacteurs/microbiologie , Eaux usées/microbiologie
10.
J Hazard Mater ; 474: 134760, 2024 Aug 05.
Article de Anglais | MEDLINE | ID: mdl-38820746

RÉSUMÉ

In this study, we investigated the adsorption of Cd(II) and the biosynthesis of CdS quantum dots (QDs) mediated by cells of sulfate-reducing bacteria before and after the removal of EPS to determine whether EPS or the cell wall plays a major role. Potentiometric titration revealed that the concentration of proton-active binding sites on cells with EPS (EPS-intact) was notably higher than that on cells without EPS (EPS-free) and that the sites were predominantly carboxyl, phosphoryl, hydroxyl, and amine groups. The protein content in EPS-intact cells was higher, and thus the Cd(II) adsorption capacity was stronger. The CdS QDs biosynthesized using EPS-intact possessed better properties, including uniform size distribution, good crystallinity, small particle size, high fluorescence, and strong antimicrobial activity, and the yields were significantly higher than those of EPS-free by a factor of about 1.5-3.7. Further studies revealed that alkaline amino acids in EPS play a major role and serve as templates in the biosynthesis of QDs, whereas they were rarely detected in the cell wall. This study emphasizes the important role of EPS in the bacterial binding of metals and efficient recycling of hazardous waste in water.


Sujet(s)
Composés du cadmium , Boîtes quantiques , Sulfures , Boîtes quantiques/composition chimique , Composés du cadmium/métabolisme , Composés du cadmium/composition chimique , Sulfures/composition chimique , Sulfures/métabolisme , Adsorption , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Cadmium/métabolisme , Cadmium/composition chimique
11.
Talanta ; 276: 126231, 2024 Aug 15.
Article de Anglais | MEDLINE | ID: mdl-38788376

RÉSUMÉ

Extracellular polymeric substances (EPS), which were an important fraction of natural organic matter (NOM), played an important role in various environmental processes. However, the heterogeneity, complexity, and dynamics of EPS make their interactions with antibiotics elusive. Using advanced multispectral technology, this study examined how EPS interacts with different concentrations of tetracycline (TC) in the soil system. Our results demonstrated that protein-like (C1), fulvic-like (C2), and humic-like (C3) fractions were identified from EPS. Two-dimensional synchronous correlation spectroscopy (2D-SF-COS) indicated that the protein-like fraction gave faster responses than the fulvic-like fraction during the TC binding process. The sequence of structural changes in EPS due to TC binding was revealed by two-dimensional Fourier Transformation Infrared correlation spectroscopy (2D-FTIR-COS) as follows: 1550 > 1660 > 1395 > 1240 > 1087 cm-1. It is noteworthy that the sensitivity of the amide group to TC has been preserved, with its intensity gradually increasing to become the primary binding site for TC. The integration of hetero-2DCOS maps with moving window 2D correlation spectroscopy (MW2DCOS) provided a unique insight into understanding the correlation between EPS fractions and functional groups during the TC binding process. Moreover, molecular docking (MD) discovered that the extracellular proteins would provide plenty of binding sites with TC through salt bridges, hydrogen bonds, and π-π base-stacking forces. With these results, systematic investigations of the dynamic changes in EPS components under different concentrations of antibiotic exposure demonstrated the advanced capabilities of multispectral technology in examining intricate interactions with EPS in the soil environment.


Sujet(s)
Escherichia coli , Matrice de substances polymériques extracellulaires , Simulation de docking moléculaire , Tétracycline , Tétracycline/composition chimique , Tétracycline/métabolisme , Escherichia coli/métabolisme , Escherichia coli/effets des médicaments et des substances chimiques , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Antibactériens/composition chimique , Antibactériens/pharmacologie , Antibactériens/métabolisme , Sites de fixation , Spectroscopie infrarouge à transformée de Fourier
12.
N Biotechnol ; 82: 33-42, 2024 Sep 25.
Article de Anglais | MEDLINE | ID: mdl-38714292

RÉSUMÉ

Given the necessity for bioprocesses scaling-up, the present study aims to explore the potential of three marine cyanobacteria and a consortium, cultivated in semi-continuous mode, as a green approach for i) continuous exopolysaccharide-rich biomass production and ii) removal of positively charged metals (Cu, Ni, Zn) from mono and multi-metallic solutions. To ensure the effectiveness of both cellular and released exopolysaccharides, weekly harvested whole cultures were confined in dialysis tubings. The results revealed that all the tested cyanobacteria have a stronger affinity towards Cu in mono and three-metal systems. Despite the amount of metals removed per gram of biomass decreased with higher biosorbent dosage, the more soluble carbohydrates were produced, the greater was the metal uptake, underscoring the pivotal role of released exopolysaccharides in metal biosorption. According to this, Dactylococcopsis salina 16Som2 showed the highest carbohydrate productivity (142 mg L-1 d-1) and metal uptake (84 mg Cu g-1 biomass) representing a promising candidate for further studies. The semi-continuous cultivation of marine cyanobacteria here reported assures a schedulable production of exopolysaccharide-rich biosorbents with high metal removal and recovery potential, even from multi-metallic solutions, as a step forward in the industrial application of cyanobacteria.


Sujet(s)
Cyanobactéries , Cyanobactéries/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Biomasse , Biotechnologie , Métaux/métabolisme , Métaux/composition chimique , Technologie de la chimie verte
13.
J Microbiol Methods ; 221: 106942, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38704038

RÉSUMÉ

Methylation analysis was performed on methylated alditol acetate standards and Streptococcus mutans extracellular polymeric substances (EPS) produced from wild-type and Gtf knockout strains (∆GtfB, ∆GtfB, and ∆GtfD). The methylated alditol acetate standards were representative of glycosidic linkages found in S. mutans EPS and were used to calibrate the GC-MS system for an FID detector and MS (TIC) and produce molar response factor, a necessary step in quantitative analysis. FID response factors were consistent with literature values (Sweet et al., 1975) and found to be the superior option for quantitative results, although the TIC response factors now give researchers without access to an FID detector a needed option for molar response factor correction. The GC-MS analysis is then used to deliver the ratio of the linkage types within a biofilm.


Sujet(s)
Biofilms , Chromatographie gazeuse-spectrométrie de masse , Polyosides bactériens , Streptococcus mutans , Biofilms/croissance et développement , Streptococcus mutans/génétique , Streptococcus mutans/métabolisme , Chromatographie gazeuse-spectrométrie de masse/méthodes , Polyosides bactériens/métabolisme , Hétérosides/métabolisme , Méthylation , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Polyosides/métabolisme
14.
Front Cell Infect Microbiol ; 14: 1374817, 2024.
Article de Anglais | MEDLINE | ID: mdl-38779563

RÉSUMÉ

Introduction: Periodontal diseases are known to be associated with polymicrobial biofilms and inflammasome activation. A deeper understanding of the subgingival cytological (micro) landscape, the role of extracellular DNA (eDNA) during periodontitis, and contribution of the host immune eDNA to inflammasome persistence, may improve our understanding of the mechanisms underlaying severe forms of periodontitis. Methods: In this work, subgingival biolfilms developing on biologically neutral polyethylene terephthalate films placed in gingival cavities of patients with chronic periodontitis were investigated by confocal laser scanning microscopy (CLSM). This allowed examination of realistic cytological landscapes and visualization of extracellular polymeric substances (EPS) including amyloids, total proteins, carbohydrates and eDNA, as well as comparison with several single-strain in vitro model biofilms produced by oral pathogens such as Klebsiella pneumoniae, Pseudomonas aeruginosa, Staphylococcus aureus, Streptococcus gordonii, S. sanguinis and S. mitis. Fluorescence in situ hybridization (FISH) analysis was also used to identify eDNA derived from eubacteria, streptococci and members of the Bacteroides-Porphyromonas-Prevotella (BPP) group associated with periodontitis. Results: Analysis of subgingival biofilm EPS revealed low levels of amyloids and high levels of eDNA which appears to be the main matrix component. However, bacterial eDNA contributed less than a third of the total eDNA observed, suggesting that host-derived eDNA released in neutrophil extracellular traps may be of more importance in the development of biofilms causing periodontitis. Discussion: eDNA derived from host immunocompetent cells activated at the onset of periodontitis may therefore be a major driver of bacterial persistence and pathogenesis.


Sujet(s)
Biofilms , Parodontite , Biofilms/croissance et développement , Humains , Parodontite/microbiologie , Microscopie confocale , ADN , Hybridation fluorescente in situ , Bactéries/génétique , ADN bactérien/génétique , Inflammasomes/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Gencive/microbiologie , Parodontite chronique/microbiologie , Parodontite chronique/immunologie
15.
Water Res ; 257: 121718, 2024 Jun 15.
Article de Anglais | MEDLINE | ID: mdl-38723358

RÉSUMÉ

Extracellular polymeric substances (EPS) participate in the removal of organic micropollutants (OMPs), but the primary pathways of removal and detailed mechanisms remain elusive. We evaluated the effect of EPS on removal for 16 distinct chemical classes of OMPs during anaerobic digestion (AD). The results showed that hydrophobic OMPs (HBOMPs) could not be removed by EPS, while hydrophilic OMPs (HLOMPs) were amenable to removal via adsorption and biotransformation of EPS. The adsorption and biotransformation of HLOMPs by EPS accounted up to 19.4 ± 0.9 % and 6.0 ± 0.8 % of total removal, respectively. Further investigations into the adsorption and biotransformation mechanisms of HLOMPs by EPS were conducted utilizing spectral, molecular dynamics simulation, and electrochemical analysis. The results suggested that EPS provided abundant binding sites for the adsorption of HLOMPs. The binding of HLOMPs to tryptophan-like proteins in EPS formed nonfluorescent complexes. Hydrogen bonds, hydrophobic interactions and water bridges were key to the binding processes and helped stabilize the complexes. The biotransformation of HLOMPs by EPS may be attributed to the presence of extracellular redox active components (c-type cytochromes (c-Cyts), c-Cyts-bound flavins). This study enhanced the comprehension for the role of EPS on the OMPs removal in anaerobic wastewater treatment.


Sujet(s)
Biotransformation , Matrice de substances polymériques extracellulaires , Eaux usées , Polluants chimiques de l'eau , Eaux usées/composition chimique , Adsorption , Anaérobiose , Polluants chimiques de l'eau/métabolisme , Polluants chimiques de l'eau/composition chimique , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/composition chimique , Élimination des déchets liquides/méthodes , Purification de l'eau/méthodes , Interactions hydrophobes et hydrophiles , Simulation de dynamique moléculaire
16.
Water Res ; 257: 121754, 2024 Jun 15.
Article de Anglais | MEDLINE | ID: mdl-38762929

RÉSUMÉ

Algal-bacterial granular sludge (ABGS) system is promising in wastewater treatment for its potential in energy-neutrality and carbon-neutrality. However, traditional cultivation of ABGS poses significant challenges attributable to its long start-up period and high energy consumption. Extracellular polymeric substances (EPS), which could be stimulated as a self-defense strategy in cells under toxic contaminants stress, has been considered to contribute to the ABGS granulation process. In this study, photogranulation of ABGS by EPS regulation in response to varying loading rates of N-Methylpyrrolidone (NMP) was investigated for the first time. The results indicated the formation of ABGS with a maximum average diameter of ∼3.3 mm and an exceptionally low SVI5 value of 67 ± 2 mL g-1 under an NMP loading rate of 125 mg L-1 d-1, thereby demonstrating outstanding settleability. Besides, almost complete removal of 300 mg L-1 NMP could be achieved at hydraulic retention time of 48 h, accompanied by chemical oxygen demand (COD) and total nitrogen (TN) removal efficiencies higher than 90 % and 70 %, respectively. Moreover, possible degradation pathway and metabolism mechanism in the ABGS system for enhanced removal of NMP and nitrogen were proposed. In this ABGS system, the mycelium with network structure constituted by filamentous microorganisms was a prerequisite for photogranulation, instead of necessarily leading to granulation. Stress of 100-150 mg L-1 d-1 NMP loading rate stimulated tightly-bound EPS (TB-EPS) variation, resulting in rapid photogranulation. The crucial role of TB-EPS was revealed with the involved mechanisms being clarified. This study provides a novel insight into ABGS development based on the TB-EPS regulation by NMP, which is significant for achieving the manipulation of photogranules.


Sujet(s)
Matrice de substances polymériques extracellulaires , Pyrrolidones , Eaux d'égout , Eaux d'égout/microbiologie , Matrice de substances polymériques extracellulaires/métabolisme , Pyrrolidones/métabolisme , Élimination des déchets liquides , Azote , Bactéries/métabolisme , Analyse de la demande biologique en oxygène , Eaux usées/composition chimique
17.
Front Biosci (Landmark Ed) ; 29(4): 133, 2024 Mar 29.
Article de Anglais | MEDLINE | ID: mdl-38682189

RÉSUMÉ

Biofilms, which consist of microorganisms enclosed in an extracellular polymeric material (EPS), hold immense importance in the fields of environmental research, industry, and medicine. They play a significant role in ecosystem dynamics and stability, but they also pose issues such as biofouling, corrosion, and pollution. Biofilms in medical environments are linked to persistent infections and elevated healthcare expenses. The EPS matrix plays a crucial role in maintaining the structural integrity and antibiotic resistance of these structures. The research primarily investigates the role of the EPS matrix in facilitating horizontal gene transfer among biofilm communities, with a particular emphasis on EPS and its impact on this process. The process is recognized as a pivotal mechanism in the emergence of antibiotic resistance, underscoring the crucial function of EPS in the dynamics of biofilms. The analysis also highlights the significant financial constraints caused by biofilms in several industries. Biofilm-associated infections in the healthcare sector result in escalated treatment expenses and extended hospitalization periods. In an industrial context, biofilms have a role in increasing maintenance expenses and product contamination, emphasizing the need for efficient management solutions. This review presents the most recent progress in biofilm research, emphasizing the utilization of sophisticated imaging tools and molecular methodologies. In addition to conventional imaging techniques, the research explores the utilization of sophisticated molecular tools, such as DNA and RNA sequencing, in conjunction with proteomics. These approaches are essential for assessing the genetic and metabolic mechanisms that regulate biofilm development and antibiotic resistance. The review underscores the significance of employing an interdisciplinary methodology in the study of biofilms. By incorporating a range of approaches, such as sophisticated imaging and molecular analysis, a comprehensive understanding of biofilm dynamics may be achieved. This approach also opens up possibilities for developing novel solutions to address the negative impacts of biofilms on health, industry, and the environment.


Sujet(s)
Biofilms , Biofilms/effets des médicaments et des substances chimiques , Biofilms/croissance et développement , Humains , Résistance microbienne aux médicaments/génétique , Antibactériens/pharmacologie , Transfert horizontal de gène , Résistance bactérienne aux médicaments/génétique , Matrice de substances polymériques extracellulaires/métabolisme , Bactéries/génétique , Bactéries/effets des médicaments et des substances chimiques , Bactéries/métabolisme
18.
Water Res ; 256: 121641, 2024 Jun 01.
Article de Anglais | MEDLINE | ID: mdl-38643643

RÉSUMÉ

Extracellular polymeric substances (EPS) play significant roles in the formation, function, and interactions of microalgal-bacteria consortia. Understanding the key roles of EPS depends on reliable extraction and quantification methods, but differentiating of EPS from microalgae versus bacteria is challenging. In this work, cation exchange resin (CER) and thermal treatments were applied for total EPS extraction from microalgal-bacteria mixed culture (MBMC), flow cytometry combined with SYTOX Green staining was applied to evaluate cell disruption during EPS extraction, and auto-fluorescence-based cell sorting (AFCS) was used to separate microalgae and bacteria in the MBMC. Thermal extraction achieved much higher EPS yield than CER, but higher temperature and longer time reduced cell activity and disrupted the cells. The highest EPS yield with minimal loss of cell activity and cell disruption was achieved using thermal extraction at 55℃ for 30 min, and this protocol gave good results for MBMC with different microalgae:bacteria (M:B) mass ratios. AFCS combined with thermal treatment achieved the most-efficient biomass differentiation and low EPS loss (<4.5 %) for the entire range of M:B ratios. EPS concentrations in bacteria were larger than in microalgae: 42.8 ± 0.4 mg COD/g TSS versus 9.19 ± 0.38 mg COD/g TSS. These findings document sensitive and accurate methods to extract and quantify EPS from microalgal-bacteria aggregates.


Sujet(s)
Bactéries , Matrice de substances polymériques extracellulaires , Microalgues , Matrice de substances polymériques extracellulaires/métabolisme , Bactéries/métabolisme , Biomasse , Cytométrie en flux
19.
J Hazard Mater ; 471: 134352, 2024 Jun 05.
Article de Anglais | MEDLINE | ID: mdl-38677120

RÉSUMÉ

Microcystis typically forms colonies under natural conditions, which contributes to occurrence and prevalence of algal blooms. The colonies consist of Microcystis and associated bacteria (AB), embedded in extracellular polymeric substances (EPS). Previous studies indicate that AB can induce Microcystis to form colonies, however the efficiency is generally low and results in a uniform morphotype. In this study, by using filtrated natural water, several AB strains induced unicellular M. aeruginosa to form colonies resembling several Microcystis morphotypes. The mechanisms were investigated with Methylobacterium sp. Z5. Ca2+ was necessary for Z5 to induce Microcystis to form colonies, while dissolved organic matters (DOM) facilitated AB to agglomerate Microcystis to form large colonies. EPS of living Z5, mainly the aromatic protein components, played a key role in colony induction. Z5 initially aggregated Microcystis via the bridging effects of Ca2+ and DOM, followed by the induction of EPS synthesis and secretion in Microcystis. In this process, the colony forming mode shifted from cell adhesion to a combination of cell adhesion and cell division. Intriguingly, Z5 drove the genomic rearrangement of Microcystis by upregulating some transposase genes. This study unveiled a novel mechanism about Microcystis colony formation and identified a new driver of Microcystis genomic evolution.


Sujet(s)
Calcium , Matrice de substances polymériques extracellulaires , Microcystis , Microcystis/métabolisme , Calcium/métabolisme , Matrice de substances polymériques extracellulaires/métabolisme , Methylobacterium/métabolisme , Methylobacterium/génétique
20.
J Hazard Mater ; 470: 134244, 2024 May 15.
Article de Anglais | MEDLINE | ID: mdl-38598879

RÉSUMÉ

Spirulina platensis can secrete extracellular polymeric substances (EPS) helping to protect damage from stress environment, such as cadmium (Cd2+) exposure. However, the responding mechanism of S. platensis and the secreted EPS to exposure of Cd2+ is still unclear. This research focuses on the effects of Cd2+ on the composition and structure of the EPS and the response mechanism of EPS secretion from S. platensis for Cd2+ exposure. S. platensis can produce 261.37 mg·g-1 EPS when exposing to 20 mg·L-1 CdCl2, which was 2.5 times higher than the control group. The S. platensis EPS with and without Cd2+ treatment presented similar and stable irregularly fibrous structure. The monosaccharides composition of EPS in Cd2+ treated group are similar with control group but with different monosaccharides molar ratios, especially for Rha, Gal, Glc and Glc-UA. And the Cd2+ treatment resulted in a remarkable decline of humic acid and fulvic acid content. The antioxidant ability of S. platensis EPS increased significantly when exposed to 20 mg·L-1 CdCl2, which could be helpful for S. platensis protecting damage from high concentration of Cd2+. The transcriptome analysis showed that sulfur related metabolic pathways were up-regulated significantly, which promoted the synthesis of sulfur-containing amino acids and the secretion of large amounts of EPS.


Sujet(s)
Cadmium , Spirulina , Spirulina/effets des médicaments et des substances chimiques , Spirulina/métabolisme , Cadmium/toxicité , Substances humiques , Matrice de substances polymériques extracellulaires/métabolisme , Matrice de substances polymériques extracellulaires/effets des médicaments et des substances chimiques , Benzopyranes/pharmacologie , Antioxydants/métabolisme , Oses
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