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1.
Int J Mol Sci ; 25(11)2024 May 26.
Article de Anglais | MEDLINE | ID: mdl-38891969

RÉSUMÉ

The increasing problem of antimicrobial resistance in N. gonorrhoeae necessitates the development of molecular typing schemes that are suitable for rapid and mass screening. The objective of this study was to design and validate a mini-MLST scheme for N. gonorrhoeae based on global pathogen population data. Using sequences of seven housekeeping genes of 21,402 isolates with known MLSTs from the PubMLST database, we identified eighteen informative polymorphisms and obtained mini-MLST nucleotide profiles to predict MLSTs of isolates. We proposed a new MLST grouping system for N. gonorrhoeae based on mini-MLST profiles. Phylogenetic analysis revealed that MLST genogroups are a stable characteristic of the N. gonorrhoeae global population. The proposed grouping system has been shown to bring together isolates with similar antimicrobial susceptibility, as demonstrated by the characteristics of major genogroups. Established MLST prediction algorithms based on nucleotide profiles are now publicly available. The mini-MLST scheme was evaluated using a MLST detection/prediction method based on the original hydrogel DNA microarray. The results confirmed a high predictive ability up to the MLST genogroup. The proposed holistic approach to gonococcal population analysis can be used for the continuous surveillance of known and emerging resistant N. gonorrhoeae isolates.


Sujet(s)
Gonorrhée , Typage par séquençage multilocus , Neisseria gonorrhoeae , Phylogenèse , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/classification , Typage par séquençage multilocus/méthodes , Gonorrhée/microbiologie , Gonorrhée/diagnostic , Humains , Techniques de typage bactérien/méthodes
2.
Curr Microbiol ; 81(8): 221, 2024 Jun 14.
Article de Anglais | MEDLINE | ID: mdl-38874629

RÉSUMÉ

Schaalia turicensis is facultative anaerobic Gram-positive bacillus that commonly inhabits the oropharynx, gastrointestinal, and genitourinary tract of healthy individuals. This organism has been co-isolated with Neisseria gonorrhoeae from 15-year-old Thai male patient with gonococcal urethritis in Bangkok, Thailand. In this study, we characterized the class 1 integron in S. turicensis isolate using whole-genome sequencing and bioinformatics analysis. Sequencing analysis confirmed the presence of an imperfect class 1 integron located on chromosome and a novel 24.5-kb-long composite transposon, named Tn7083. The transposon Tn7083 carried genes encoding chloramphenicol resistance (cmx), sulfonamide resistance (sul1), and aminoglycoside resistance [aph(6)-Id (strB), aph(3'')-Ib (strA), aph(3')-Ia].


Sujet(s)
Antibactériens , Génome bactérien , Gonorrhée , Urétrite , Humains , Mâle , Thaïlande , Urétrite/microbiologie , Gonorrhée/microbiologie , Antibactériens/pharmacologie , Adolescent , Séquençage du génome entier , Tests de sensibilité microbienne , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/isolement et purification , Neisseria gonorrhoeae/classification , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Éléments transposables d'ADN/génétique , Résistance bactérienne aux médicaments/génétique
3.
Emerg Infect Dis ; 30(7): 1493-1495, 2024 Jul.
Article de Anglais | MEDLINE | ID: mdl-38916864

RÉSUMÉ

To determine antimicrobial susceptibility of Neisseria gonorrhoeae, we analyzed phenotypes and genomes of 72 isolates collected in Cambodia in 2023. Of those, 9/72 (12.5%) were extensively drug resistant, a 3-fold increase from 2022. Genomic analysis confirmed expansion of newly emerging resistant clones and ongoing resistance emergence across new phylogenetic backbones.


Sujet(s)
Antibactériens , Gonorrhée , Tests de sensibilité microbienne , Neisseria gonorrhoeae , Organisation mondiale de la santé , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Cambodge/épidémiologie , Humains , Gonorrhée/microbiologie , Gonorrhée/épidémiologie , Gonorrhée/traitement médicamenteux , Antibactériens/pharmacologie , Résistance bactérienne aux médicaments , Phylogenèse , Mâle , Femelle , Adulte
4.
Front Cell Infect Microbiol ; 14: 1407863, 2024.
Article de Anglais | MEDLINE | ID: mdl-38808060

RÉSUMÉ

The genus Neisseria, which colonizes mucosal surfaces, includes both commensal and pathogenic species that are exclusive to humans. The two pathogenic Neisseria species are closely related but cause quite different diseases, meningococcal sepsis and meningitis (Neisseria meningitidis) and sexually transmitted gonorrhea (Neisseria gonorrhoeae). Although obvious differences in bacterial niches and mechanisms for transmission exists, pathogenic Neisseria have high levels of conservation at the levels of nucleotide sequences, gene content and synteny. Species of Neisseria express broad-spectrum O-linked protein glycosylation where the glycoproteins are largely transmembrane proteins or lipoproteins localized on the cell surface or in the periplasm. There are diverse functions among the identified glycoproteins, for example type IV biogenesis proteins, proteins involved in antimicrobial resistance, as well as surface proteins that have been suggested as vaccine candidates. The most abundant glycoprotein, PilE, is the major subunit of pili which are an important colonization factor. The glycans attached can vary extensively due to phase variation of protein glycosylation (pgl) genes and polymorphic pgl gene content. The exact roles of glycosylation in Neisseria remains to be determined, but increasing evidence suggests that glycan variability can be a strategy to evade the human immune system. In addition, pathogenic and commensal Neisseria appear to have significant glycosylation differences. Here, the current knowledge and implications of protein glycosylation genes, glycan diversity, glycoproteins and immunogenicity in pathogenic Neisseria are summarized and discussed.


Sujet(s)
Neisseria gonorrhoeae , Neisseria meningitidis , Humains , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Glycoprotéines/métabolisme , Glycoprotéines/génétique , Glycosylation , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/métabolisme , Neisseria gonorrhoeae/pathogénicité , Neisseria gonorrhoeae/immunologie , Neisseria meningitidis/génétique , Neisseria meningitidis/métabolisme , Polyosides/métabolisme , Méningite à méningocoques/microbiologie , Gonorrhée/microbiologie
6.
Int J Infect Dis ; 145: 107082, 2024 Aug.
Article de Anglais | MEDLINE | ID: mdl-38703812

RÉSUMÉ

OBJECTIVES: Antimicrobial resistance poses a considerable threat in high-antimicrobial-consumption populations, such as men who have sex with men (MSM) taking HIV pre-exposure prophylaxis. While the ResistAZM trial found no increase in macrolide resistance genes in MSM with gonorrhea after azithromycin treatment, the MORDOR trial observed an increase in these genes after mass azithromycin distribution. We hypothesized that this could be due to saturation of the resistome. To test this hypothesis, we compared the abundance of macrolide resistance determinants in anorectal samples between the baselines of the two trials. METHODS: Shotgun metagenome reads from the anorectal baseline samples from the ResistAZM (n = 42) and MORDOR (n = 30) trials were analyzed using AMRPlusPlus. Nonhost reads were mapped to the MEGARes database to detect antibiotic resistance genes (ARG). Antimicrobial resistance (AMR) was normalized using cumulative sum scaling, and ARG abundance was estimated. RESULTS: Macrolide, lincosamides, and streptogramins determinants were approximately 10-fold more abundant in the ResistAZM than the MORDOR samples (P ≤ 0.001). CONCLUSION: The findings are compatible with our hypothesis. Thus, in populations with high-antimicrobial use, the relationship between antimicrobial consumption and AMR may be diminished due to saturation. These findings are vital for future studies investigating the resistogencity of novel interventions, such as doxycycline post-exposure prophylaxis, in populations with high preceding consumption of antimicrobials.


Sujet(s)
Antibactériens , Azithromycine , Résistance bactérienne aux médicaments , Humains , Mâle , Antibactériens/pharmacologie , Azithromycine/pharmacologie , Résistance bactérienne aux médicaments/génétique , Gonorrhée/microbiologie , Gonorrhée/traitement médicamenteux , Homosexualité masculine , Macrolides/pharmacologie , Lincosamides/pharmacologie , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Streptogramines/pharmacologie , Infections à VIH/traitement médicamenteux , Adulte , Prophylaxie pré-exposition , Métagénome
8.
PLoS One ; 19(5): e0302785, 2024.
Article de Anglais | MEDLINE | ID: mdl-38768150

RÉSUMÉ

INTRODUCTION: The rates of gonorrhea and chlamydia have been increasing in the years preceding the COVID19 pandemic. Because most gonorrhea and chlamydia infections are located in the oropharynx and rectum for men who have sex with men (MSM), and because at-home self-collected swabs for these infections are not licensed by Health Canada or the United States Food and Drug Administration, decreased accessed to in-person care during and since the COVID19 pandemic potentially means missed case findings. OBJECTIVES: To evaluate the performance of at-home self-collected pharyngeal and rectal swabs for gonorrhea and chlamydia nucleic acid amplification testing. METHODOLOGY: All persons who contacted our Sexual Health Clinic and who had a clinical indication to complete oral and/or rectal swabs for gonorrhea and chlamydia were invited to complete at-home swabs in advance of their scheduled appointments. We mailed swabs and instructions to those who consented. Participants brought these swabs to their scheduled in clinic appointments, where we repeated the same swabs. All matching swabs were sent to the laboratory for analysis to determine concordance. RESULTS: From September 8, 2022 to July 18, 2023, we enrolled 296 eligible participants who provided 1184 swabs. For analysis, cancelled specimens and specimens with invalid results were excluded, leaving 1032 swabs for comparison. We identified 66 STI diagnoses in 47 unique participants. Overall accuracy was high (exceeding 99%), except for rectal chlamydia, which was 96.0%. While the performance of self-swabs for chlamydia was lower compared to gonorrhea, at-home swabs identified six chlamydia infections that were missed by in-clinic collected swabs (two pharyngeal, four rectal). Removing these six cases as "false positives" increased overall accuracy for chlamydia detection to 99.7% (pharyngeal) and 97.8% (rectal). CONCLUSION: Self-collected at-home swabs had good performance acceptable for gonorrhea and chlamydia nucleic acid amplification testing.


Sujet(s)
Infections à Chlamydia , Chlamydia trachomatis , Gonorrhée , Neisseria gonorrhoeae , Pharynx , Rectum , Manipulation d'échantillons , Humains , Chlamydia trachomatis/isolement et purification , Chlamydia trachomatis/génétique , Infections à Chlamydia/diagnostic , Infections à Chlamydia/microbiologie , Gonorrhée/diagnostic , Gonorrhée/microbiologie , Mâle , Neisseria gonorrhoeae/isolement et purification , Neisseria gonorrhoeae/génétique , Rectum/microbiologie , Pharynx/microbiologie , Manipulation d'échantillons/méthodes , Adulte , Femelle , Techniques d'amplification d'acides nucléiques/méthodes , Homosexualité masculine , Adulte d'âge moyen , Autosoins , Jeune adulte
9.
Biosensors (Basel) ; 14(5)2024 May 20.
Article de Anglais | MEDLINE | ID: mdl-38785734

RÉSUMÉ

Sexually transmitted diseases (STDs) are a global concern because approximately 1 million new cases emerge daily. Most STDs are curable, but if left untreated, they can cause severe long-term health implications, including infertility and even death. Therefore, a test enabling rapid and accurate screening and genotyping of STD pathogens is highly awaited. Herein, we present the development of the DNA-based 6STD Genotyping 9G Membrane test, a lateral flow strip membrane assay, for the detection and genotyping of six STD pathogens, including Trichomonas vaginalis, Ureaplasma urealyticum, Neisseria gonorrhoeae, Chlamydia trachomatis, Mycoplasma hominis, and Mycoplasma genitalium. Here, we developed a multiplex PCR primer set that allows PCR amplification of genomic materials for these six STD pathogens. We also developed the six ssDNA probes that allow highly efficient detection of the six STD pathogens. The 6STD Genotyping 9G Membrane test lets us obtain the final detection and genotyping results in less than 30 m after PCR at 25 °C. The accuracy of the 6STD Genotyping 9G membrane test in STD genotyping was confirmed by its 100% concordance with the sequencing results of 120 clinical samples. Therefore, the 6STD Genotyping 9G Membrane test emerges as a promising diagnostic tool for precise STD genotyping, facilitating informed decision-making in clinical practice.


Sujet(s)
Chlamydia trachomatis , Génotype , Neisseria gonorrhoeae , Maladies sexuellement transmissibles , Humains , Chlamydia trachomatis/génétique , Chlamydia trachomatis/isolement et purification , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/isolement et purification , Maladies sexuellement transmissibles/microbiologie , Maladies sexuellement transmissibles/diagnostic , Trichomonas vaginalis/génétique , Trichomonas vaginalis/isolement et purification , Techniques de génotypage , Mycoplasma hominis/isolement et purification , Mycoplasma hominis/génétique , Ureaplasma urealyticum/génétique , Ureaplasma urealyticum/isolement et purification , ADN , Mycoplasma genitalium/génétique , Mycoplasma genitalium/isolement et purification , Techniques de biocapteur , ADN bactérien/analyse , Réaction de polymérisation en chaine multiplex/méthodes
10.
Sex Transm Infect ; 100(4): 226-230, 2024 May 31.
Article de Anglais | MEDLINE | ID: mdl-38702191

RÉSUMÉ

OBJECTIVES: Antibiotic resistance in gonorrhoea is of significant public health concern with the emergence of resistance to last-line therapies such as ceftriaxone. Despite around half of Neisseria gonorrhoeae isolates tested in the UK being susceptible to ciprofloxacin, very little ciprofloxacin is used in clinical practice. Testing for the S91F mutation associated with ciprofloxacin resistance is now available in CE-marked assays and may reduce the requirement for ceftriaxone, but many patients are treated empirically, or as sexual contacts, which may limit any benefit. We describe the real-world impact of such testing on antimicrobial use and clinical outcomes in people found to have gonorrhoea in a large urban UK sexual health clinic. METHODS: Molecular ciprofloxacin resistance testing (ResistancePlus GC assay (SpeeDx)) was undertaken as an additional test after initial diagnosis (m2000 Realtime CT/NG assay (Abbott Molecular)) in those not already known to have had antimicrobial treatment. Data from a 6-month period (from March to September 2022) were analysed to determine treatment choice and treatment outcome. RESULTS: A total of 998 clinical samples tested positive for N. gonorrhoeae in 682 episodes of infection. Of the 560 (56%) samples eligible for resistance testing, 269 (48.0%) were reported as wild-type, 180 (32.1%) were predicted to be resistant, 63 (11.3%) had an indeterminate resistance profile, and in 48 (8.6%) samples, N. gonorrhoeae was not detected. Ciprofloxacin was prescribed in 172 (75%) of 228 episodes in which the wild-type strain was detected. Four (2%) of those treated with ciprofloxacin had a positive test-of-cure sample by NAAT, with no reinfection risk. All four had ciprofloxacin-susceptible infection by phenotypic antimicrobial susceptibility testing. CONCLUSIONS: In routine practice in a large UK clinic, molecular ciprofloxacin resistance testing led to a significant shift in antibiotic use, reducing use of ceftriaxone. Testing can be targeted to reduce unnecessary additional testing. Longer term impact on antimicrobial resistance requires ongoing surveillance.


Sujet(s)
Antibactériens , Ciprofloxacine , Résistance bactérienne aux médicaments , Gonorrhée , Tests de sensibilité microbienne , Neisseria gonorrhoeae , Humains , Ciprofloxacine/usage thérapeutique , Ciprofloxacine/pharmacologie , Gonorrhée/traitement médicamenteux , Gonorrhée/diagnostic , Gonorrhée/microbiologie , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Antibactériens/usage thérapeutique , Antibactériens/pharmacologie , Résistance bactérienne aux médicaments/génétique , Mâle , Femelle , Adulte , Royaume-Uni , Ceftriaxone/usage thérapeutique , Ceftriaxone/pharmacologie , Mutation , Jeune adulte , Adulte d'âge moyen
11.
Microbiol Spectr ; 12(6): e0056024, 2024 Jun 04.
Article de Anglais | MEDLINE | ID: mdl-38647280

RÉSUMÉ

The continued emergence of Neisseria gonorrhoeae strains that express resistance to multiple antibiotics, including the last drug for empiric monotherapy (ceftriaxone), necessitates the development of new treatment options to cure gonorrheal infections. Toward this goal, we recently reported that corallopyronin A (CorA), which targets the switch region of the ß' subunit (RpoC) of bacterial DNA-dependent RNA polymerase (RNAP), has potent anti-gonococcal activity against a panel of multidrug-resistant clinical strains. Moreover, in that study, CorA could eliminate gonococcal infection of primary human epithelial cells and gonococci in a biofilm state. To determine if N. gonorrhoeae could develop high-level resistance to CorA in a single step, we sought to isolate spontaneous mutants expressing any CorA resistance phenotypes. However, no single-step mutants with high-level CorA resistance were isolated. High-level CorA resistance could only be achieved in this study through a multi-step pathway involving over-expression of the MtrCDE drug efflux pump and single amino acid changes in the ß and ß' subunits (RpoB and RpoC, respectively) of RNAP. Molecular modeling of RpoB and RpoC interacting with CorA was used to deduce how the amino acid changes in RpoB and RpoC could influence gonococcal resistance to CorA. Bioinformatic analyses of whole genome sequences of clinical gonococcal isolates indicated that the CorA resistance determining mutations in RpoB/C, identified herein, are very rare (≤ 0.0029%), suggesting that the proposed pathway for resistance is predictive of how this phenotype could potentially evolve if CorA is used therapeutically to treat gonorrhea in the future. IMPORTANCE: The continued emergence of multi-antibiotic-resistant strains of Neisseria gonorrhoeae necessitates the development of new antibiotics that are effective against this human pathogen. We previously described that the RNA polymerase-targeting antibiotic corallopyronin A (CorA) has potent activity against a large collection of clinical strains that express different antibiotic resistance phenotypes including when such gonococci are in a biofilm state. Herein, we tested whether a CorA-sensitive gonococcal strain could develop spontaneous resistance. Our finding that CorA resistance could only be achieved by a multi-step process involving over-expression of the MtrCDE efflux pump and single amino acid changes in RpoB and RpoC suggests that such resistance may be difficult for gonococci to evolve if this antibiotic is used in the future to treat gonorrheal infections that are refractory to cure by other antibiotics.


Sujet(s)
Antibactériens , Protéines bactériennes , DNA-directed RNA polymerases , Gonorrhée , Tests de sensibilité microbienne , Neisseria gonorrhoeae , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/enzymologie , DNA-directed RNA polymerases/génétique , DNA-directed RNA polymerases/métabolisme , Antibactériens/pharmacologie , Humains , Gonorrhée/microbiologie , Gonorrhée/traitement médicamenteux , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Résistance bactérienne aux médicaments/génétique , Mutation , Multirésistance bactérienne aux médicaments/génétique , Biofilms/effets des médicaments et des substances chimiques , Biofilms/croissance et développement , Lactones
12.
J Med Microbiol ; 73(4)2024 Apr.
Article de Anglais | MEDLINE | ID: mdl-38591530

RÉSUMÉ

Sexually transmitted infections (STI) are a public health problem. Real-time PCR assays are the most sensitive test for screening and diagnosis of these infections. The aim of this study was to evaluate a new CT/NG/TV/MG Real-Time PCR (RT-PCR) kit (Vircell) for the detection of Chamydia trachomatis, Neisseria gonorrhoeae, Mycoplasma genitalium and Trichomonas vaginalis for the diagnosis of sexual transmitted infections using the Allplex STI Essential Assay (Seegene) as the reference's method. A total of 497 samples from different anatomical sites (endocervical, urethral, rectal, pharyngeal and urine) were analysed from October 2022 to February 2023. A total of 108 (21.73 %) and 106 (21.33 %) positive samples were found for any of the assays used. The most commonly detected pathogen was N. gonorrhoeae (52 samples; 10.46 %), and the least commonly detected was T. vaginalis (three samples; 0.60 %). The anatomical site with the highest prevalence of micro-organisms was a non-urogenital site, the pharynx (26 positive samples; 5.23 %). Using the Allplex STI Essential Assay (Seegene) as the reference method, the diagnosis performance showed that the average specificity of CT/NG/TV/MG RT-PCR Kit (Vircell) was 99.84 % and the sensitivity was 99.53 %. The overall concordance was k=0.98 (CI95 %; 0.96-1). In conclusion, the CT/NG/TV/MG RT-PCR Kit (Vircell) assay shows a good sensitivity and specificity and constitutes a promising and additional alternative to routine procedures for distinct types of clinical specimen in diagnosis STI.


Sujet(s)
Infections à Chlamydia , Gonorrhée , Infections à Mycoplasma , Mycoplasma genitalium , Maladies sexuellement transmissibles , Trichomonas vaginalis , Humains , Réaction de polymérisation en chaine en temps réel , Chlamydia trachomatis/génétique , Maladies sexuellement transmissibles/diagnostic , Maladies sexuellement transmissibles/épidémiologie , Trichomonas vaginalis/génétique , Neisseria gonorrhoeae/génétique , Mycoplasma genitalium/génétique , Infections à Mycoplasma/diagnostic , Infections à Mycoplasma/épidémiologie , Tomodensitométrie , Infections à Chlamydia/diagnostic , Gonorrhée/diagnostic , Gonorrhée/épidémiologie
13.
Braz J Microbiol ; 55(2): 1053-1063, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38662152

RÉSUMÉ

In South Africa, basic healthcare centres treat sexually transmitted infections (STIs) using a syndromic approach. In line with Preferred Reporting Items for Systematic Reviews and Meta-Analyses (PRISMA) recommendations, a complete study of all randomised controlled trials and surveillance data relevant to N. gonorrhoeae antibiotic resistance was conducted. To discover papers published between 2002 and 2022, searches were undertaken using PubMed, EMBASE and any other relevant databases. This systematic review extracted a total of 463 articles published between 2002 and 2022 from a variety of online research sources. Seven South African provinces were represented in the studies that were assessed. Mpumalanga and the North West Province did not have any studies that described the identification and monitoring of antimicrobial resistance (AMR). This study presents data obtained from a comprehensive analysis of 2140 isolates, in which we examined the presence of one or more antibiotic resistance. Our findings revealed that out of these samples, 1891 isolates exhibited antimicrobial properties; tetracycline was the antimicrobial resistance that was found the most often (30%), followed by ciprofloxacin (19%) and penicillin (17%). The mean of the isolates was 143, the upper 95% mean was 243, and the standard deviation (SD) was 181.6. All microbiological identification and susceptibility testing processes must be standardised and improved so national organisations can monitor AMR. The nation's health community must address all identified areas of concern to avoid AMR.


Sujet(s)
Antibactériens , Résistance bactérienne aux médicaments , Gonorrhée , Neisseria gonorrhoeae , République d'Afrique du Sud , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/isolement et purification , Gonorrhée/microbiologie , Gonorrhée/traitement médicamenteux , Gonorrhée/épidémiologie , Humains , Antibactériens/pharmacologie , Tests de sensibilité microbienne
14.
Indian J Med Microbiol ; 49: 100592, 2024.
Article de Anglais | MEDLINE | ID: mdl-38621502

RÉSUMÉ

PURPOSE: Neisseria gonorrhoeae (NG), Chlamydia trachomatis (CT) and Mycoplasma hominis (MH), the three most common treatable bacterial sexually transmitted infections (STIs) worldwide can lead to many complications if remain untreated. Screening of high-risk population with highly sensitive methods will lead to significant improvement in patient outcomes and will prevent downward transmission. The advantages of Polymerase chain reaction (PCR) based assay are not only high sensitivity and specificity, but also detection of multiple organisms in a single reaction which reduce the result turn-around time. The aim of the present study was to evaluate the feasibility of a multiplex PCR assay method targeting 16S rRNA gene for simultaneous detection of NG, CT and MH infection along with their trend and occurrence among high-risk population in Assam, Northeast India. METHODS: A cross-sectional study was undertaken, where a total of 200 randomly selected patients from high-risk population were included. After validation of singleplex PCR, Multiplex PCR (M-PCR) was performed along with the traditional culture method for NG. RESULTS & CONCLUSION: The overall agreement of M-PCR with singleplex PCR was very high (100%). The occurrence of STI was found to be very high (101/200; 50.5%). Furthermore, co-infection was detected in 10/200; 5%) individuals. Infection was more common among young individuals (p < 0.05) and males out-numbered females (p < 0.05). The most common organism detected was CT (42/200; 21%) followed by NG (41/200; 20.5%) and MH (20/200; 10%). The M-PCR assay workflow is simple, cost effective and can be used in routine diagnostic laboratories with basic molecular facilities.


Sujet(s)
Chlamydia trachomatis , Neisseria gonorrhoeae , Sensibilité et spécificité , Humains , Inde , Femelle , Mâle , Adulte , Études transversales , Chlamydia trachomatis/génétique , Chlamydia trachomatis/isolement et purification , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/isolement et purification , Réaction de polymérisation en chaine multiplex/méthodes , Réaction de polymérisation en chaine multiplex/économie , Jeune adulte , Techniques de diagnostic moléculaire/méthodes , Techniques de diagnostic moléculaire/économie , ARN ribosomique 16S/génétique , Maladies sexuellement transmissibles bactériennes/diagnostic , Maladies sexuellement transmissibles bactériennes/microbiologie , Réaction de polymérisation en chaîne/méthodes , Réaction de polymérisation en chaîne/économie , Mycoplasma hominis/génétique , Mycoplasma hominis/isolement et purification , Adolescent , Adulte d'âge moyen , Infections à Mycoplasma/diagnostic , Infections à Mycoplasma/microbiologie
15.
J Infect ; 88(6): 106168, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38670270

RÉSUMÉ

OBJECTIVES: The utility of whole genome sequencing (WGS) to inform sexually transmitted infection (STI) patient management is unclear. Timely WGS data might support clinical management of STIs by characterising epidemiological links and antimicrobial resistance profiles. We conducted a systematic review of clinical application of WGS to any human pathogen that may be transposable to gonorrhoea. METHODS: We searched six databases for articles published between 01/01/2010-06/02/2023 that reported on real/near real-time human pathogen WGS to inform clinical intervention. All article types from all settings were included. Findings were analysed using narrative synthesis. RESULTS: We identified 12,179 articles, of which eight reported applications to inform tuberculosis (n = 7) and gonorrhoea (n = 1) clinical patient management. WGS data were successfully used as an adjunct to clinical and epidemiological data to enhance contact-tracing (n = 2), inform antimicrobial therapy (n = 5) and identify cross-contamination (n = 1). WGS identified gonorrhoea transmission chains that were not established via partner notification. Future applications could include insights into pathogen exposure detected within sexual networks for targeted patient management. CONCLUSIONS: While there was some evidence of WGS use to provide individualised tuberculosis and gonorrhoea treatment, the eight identified studies contained few participants. Future research should focus on testing WGS intervention effectiveness and examining ethical considerations of STI WGS use.


Sujet(s)
Gonorrhée , Séquençage du génome entier , Humains , Gonorrhée/traitement médicamenteux , Gonorrhée/microbiologie , Gonorrhée/épidémiologie , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Traçage des contacts , Tuberculose/traitement médicamenteux , Tuberculose/microbiologie , Tuberculose/épidémiologie , Génome bactérien , Soins aux patients
16.
mBio ; 15(5): e0011924, 2024 May 08.
Article de Anglais | MEDLINE | ID: mdl-38587424

RÉSUMÉ

Gonorrhea, caused by the bacterium Neisseria gonorrhoeae (Gc), is characterized by neutrophilic influx to infection sites. Gc has developed mechanisms to resist killing by neutrophils that include modifications to its surface lipooligosaccharide (LOS). One such LOS modification is sialylation: Gc sialylates its terminal LOS sugars with cytidine-5'-monophosphate-N-acetylneuraminic acid, which is scavenged from the host using LOS sialyltransferase (Lst) since Gc cannot make its sialic acid. Sialylation enables sensitive strains of Gc to resist complement-mediated killing in a serum-dependent manner. However, little is known about the contribution of sialylation to complement-independent, direct Gc-neutrophil interactions. In the absence of complement, we found sialylated Gc expressing opacity-associated (Opa) proteins decreased the oxidative burst and granule exocytosis from primary human neutrophils. In addition, sialylated Opa+ Gc survived better than vehicle treated or Δlst Gc when challenged with neutrophils. However, Gc sialylation did not significantly affect Opa-dependent association with or internalization of Gc by neutrophils. Previous studies have implicated sialic acid-binding immunoglobulin-type lectins (Siglecs) in modulating neutrophil interactions with sialylated Gc. Blocking neutrophil Siglecs with antibodies that bind to their extracellular domains eliminated the ability of sialylated Opa+ Gc to suppress the oxidative burst and resist neutrophil killing. These findings highlight a new role for sialylation in Gc evasion of human innate immunity, with implications for the development of vaccines and therapeutics for gonorrhea. IMPORTANCE: Neisseria gonorrhoeae, the bacterium that causes gonorrhea, is an urgent global health concern due to increasing infection rates, widespread antibiotic resistance, and its ability to thwart protective immune responses. The mechanisms by which Gc subverts protective immune responses remain poorly characterized. One way N. gonorrhoeae evades human immunity is by adding sialic acid that is scavenged from the host onto its lipooligosaccharide, using the sialyltransferase Lst. Here, we found that sialylation enhances N. gonorrhoeae survival from neutrophil assault and inhibits neutrophil activation, independently of the complement system. Our results implicate bacterial binding of sialic acid-binding lectins (Siglecs) on the neutrophil surface, which dampens neutrophil antimicrobial responses. This work identifies a new role for sialylation in protecting N. gonorrhoeae from cellular innate immunity, which can be targeted to enhance the human immune response in gonorrhea.


Sujet(s)
Gonorrhée , Acide N-acétyl-neuraminique , Neisseria gonorrhoeae , Activation des neutrophiles , Granulocytes neutrophiles , Lectines liant l'acide sialique apparentées aux immunoglobulines , Neisseria gonorrhoeae/immunologie , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/métabolisme , Humains , Acide N-acétyl-neuraminique/métabolisme , Granulocytes neutrophiles/immunologie , Granulocytes neutrophiles/métabolisme , Granulocytes neutrophiles/microbiologie , Lectines liant l'acide sialique apparentées aux immunoglobulines/métabolisme , Lectines liant l'acide sialique apparentées aux immunoglobulines/génétique , Gonorrhée/immunologie , Gonorrhée/microbiologie , Protéines du système du complément/immunologie , Protéines du système du complément/métabolisme , Lipopolysaccharides/métabolisme , Protéines de la membrane externe bactérienne/métabolisme , Protéines de la membrane externe bactérienne/immunologie , Protéines de la membrane externe bactérienne/génétique , Stimulation du métabolisme oxydatif , Interactions hôte-pathogène/immunologie , Échappement immunitaire
17.
J Basic Microbiol ; 64(6): e2300751, 2024 Jun.
Article de Anglais | MEDLINE | ID: mdl-38644586

RÉSUMÉ

NAD+-dependent (2 R,3 R)­2,3­butanediol dehydrogenase (BDH) from Neisseria gonorrhoeae (NgBDH) is a representative member of the medium-chain dehydrogenase/reductase (MDR) superfamily. To date, little information is available on the substrate binding sites and catalytic residues of BDHs from this superfamily. In this work, according to molecular docking studies, we found that conserved residues Phe120 and Val161 form strong hydrophobic interactions with both (2 R,3 R)­2,3­butanediol (RR-BD) and meso-2,3­butanediol (meso-BD) and that mutations of these residues to alanine or threonine impair substrate binding. To further evaluate the roles of these two residues, Phe120 and Val161 were mutated to alanine or threonine. Kinetic analysis revealed that, relative to those of wild type, the apparent KM values of the Phe120Ala mutant for RR-BD and meso-BD increased 36- and 369-fold, respectively; the catalytic efficiencies of this mutant with RR-BD and meso-BD decreased approximately 586- and 3528-fold, respectively; and the apparent KM values of the Val161Ala mutant for RR-BD and meso-BD increased 4- and 37-fold, respectively, the catalytic efficiencies of this mutant with RR-BD and meso-BD decreased approximately 3- and 28-fold, respectively. Additionally, the Val161Thr mutant slightly decreased catalytic efficiencies (twofold with RR-BD; 7.3-fold with meso-BD) due to an increase in KM (sixfold for RR-BD; 24-fold for meso-BD) and a slight increase (2.8-fold with RR-BD; 3.3-fold with meso-BD) in kcat. These findings validate the critical roles of Phe120 and Val161 of NgBDH in substrate binding and catalysis. Overall, the current study provides a better understanding of the substrate binding and catalysis of BDHs within the MDR superfamily.


Sujet(s)
Alcohol oxidoreductases , Butylène glycols , Simulation de docking moléculaire , Mutagenèse dirigée , Neisseria gonorrhoeae , Phénylalanine , Neisseria gonorrhoeae/enzymologie , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/métabolisme , Alcohol oxidoreductases/génétique , Alcohol oxidoreductases/métabolisme , Alcohol oxidoreductases/composition chimique , Cinétique , Butylène glycols/métabolisme , Phénylalanine/métabolisme , Phénylalanine/génétique , Sites de fixation , Spécificité du substrat , Protéines bactériennes/génétique , Protéines bactériennes/métabolisme , Protéines bactériennes/composition chimique , Valine/métabolisme , Valine/génétique , Domaine catalytique , Interactions hydrophobes et hydrophiles
18.
BMJ Open ; 14(4): e081675, 2024 Apr 16.
Article de Anglais | MEDLINE | ID: mdl-38626958

RÉSUMÉ

INTRODUCTION: Gonorrhoea, the sexually transmissible infection caused by Neisseria gonorrhoeae, has a substantial impact on sexual and reproductive health globally with an estimated 82 million new infections each year worldwide. N. gonorrhoeae antimicrobial resistance continues to escalate, and disease control is largely reliant on effective therapy as there is no proven effective gonococcal vaccine available. However, there is increasing evidence from observational cohort studies that the serogroup B meningococcal vaccine four-component meningitis B vaccine (4CMenB) (Bexsero), licensed to prevent invasive disease caused by Neisseria meningitidis, may provide cross-protection against the closely related bacterium N. gonorrhoeae. This study will evaluate the efficacy of 4CMenB against N. gonorrhoeae infection in men (cis and trans), transwomen and non-binary people who have sex with men (hereafter referred to as GBM+). METHODS AND ANALYSIS: This is a double-blind, randomised placebo-controlled trial in GBM+, either HIV-negative on pre-exposure prophylaxis against HIV or living with HIV (CD4 count >350 cells/mm3), who have had a diagnosis of gonorrhoea or infectious syphilis in the last 18 months (a key characteristic associated with a high risk of N. gonorrhoeae infection). Participants are randomised 1:1 to receive two doses of 4CMenB or placebo 3 months apart. Participants have 3-monthly visits over 24 months, which include testing for N. gonorrhoeae and other sexually transmissible infections, collection of demographics, sexual behaviour risks and antibiotic use, and collection of research samples for analysis of N. gonorrhoeae-specific systemic and mucosal immune responses. The primary outcome is the incidence of the first episode of N. gonorrhoeae infection, as determined by nucleic acid amplification tests, post month 4. Additional outcomes consider the incidence of symptomatic or asymptomatic N. gonorrhoeae infection at different anatomical sites (ie, urogenital, anorectum or oropharynx), incidence by N. gonorrhoeae genotype and antimicrobial resistance phenotype, and level and functional activity of N. gonorrhoeae-specific antibodies. ETHICS AND DISSEMINATION: Ethical approval was obtained from the St Vincent's Hospital Human Research Ethics Committee, St Vincent's Hospital Sydney, NSW, Australia (ref: 2020/ETH01084). Results will be disseminated in peer-reviewed journals and via presentation at national and international conferences. TRIAL REGISTRATION NUMBER: NCT04415424.


Sujet(s)
Anti-infectieux , Gonorrhée , Infections à VIH , Infections à méningocoques , Vaccins antiméningococciques , Minorités sexuelles , Mâle , Humains , Gonorrhée/épidémiologie , Gonorrhée/prévention et contrôle , Gonorrhée/traitement médicamenteux , Vaccins antiméningococciques/usage thérapeutique , Infections à méningocoques/épidémiologie , Homosexualité masculine , Neisseria gonorrhoeae/génétique , Infections à VIH/traitement médicamenteux , Essais contrôlés randomisés comme sujet , Études multicentriques comme sujet
19.
Lancet Microbe ; 5(5): e478-e488, 2024 May.
Article de Anglais | MEDLINE | ID: mdl-38614111

RÉSUMÉ

BACKGROUND: Regular quality-assured whole-genome sequencing linked to antimicrobial resistance (AMR) and patient metadata is imperative to elucidate the shifting gonorrhoea epidemiology, both nationally and internationally. We aimed to examine the gonococcal population in the European Economic Area (EEA) in 2020, elucidate emerging and disappearing gonococcal lineages associated with AMR and patient metadata, compare with 2013 and 2018 whole-genome sequencing data, and explain changes in gonococcal AMR and gonorrhoea epidemiology. METHODS: In this retrospective genomic surveillance study, we analysed consecutive gonococcal isolates that were collected in EEA countries through the European Gonococcal Antimicrobial Surveillance Programme (Euro-GASP) in 2020, and made comparisons with Euro-GASP data from 2013 and 2018. All isolates had linked AMR data (based on minimum inhibitory concentration determination) and patient metadata. We performed whole-genome sequencing and molecular typing and AMR determinants were derived from quality-checked whole-genome sequencing data. Links between genomic lineages, AMR, and patient metadata were examined. FINDINGS: 1932 gonococcal isolates collected in 2020 in 21 EEA countries were included. The majority (81·2%, 147 of 181 isolates) of azithromycin resistance (present in 9·4%, 181 of 1932) was explained by the continued expansion of the Neisseria gonorrhoeae sequence typing for antimicrobial resistance (NG-STAR) clonal complexes (CCs) 63, 168, and 213 (with mtrD/mtrR promoter mosaic 2) and the novel NG-STAR CC1031 (semi-mosaic mtrD variant 13), associated with men who have sex with men and anorectal or oropharyngeal infections. The declining cefixime resistance (0·5%, nine of 1932) and negligible ceftriaxone resistance (0·1%, one of 1932) was largely because of the progressive disappearance of NG-STAR CC90 (with mosaic penA allele), which was predominant in 2013. No known resistance determinants for novel antimicrobials (zoliflodacin, gepotidacin, and lefamulin) were found. INTERPRETATION: Azithromycin-resistant clones, mainly with mtrD mosaic or semi-mosaic variants, appear to be stabilising at a relatively high level in the EEA. This mostly low-level azithromycin resistance might threaten the recommended ceftriaxone-azithromycin therapy, but the negligible ceftriaxone resistance is encouraging. The decreased genomic population diversity and increased clonality could be explained in part by the COVID-19 pandemic resulting in lower importation of novel strains into Europe. FUNDING: European Centre for Disease Prevention and Control and Örebro University Hospital.


Sujet(s)
Antibactériens , Résistance bactérienne aux médicaments , Gonorrhée , Tests de sensibilité microbienne , Neisseria gonorrhoeae , Séquençage du génome entier , Neisseria gonorrhoeae/effets des médicaments et des substances chimiques , Neisseria gonorrhoeae/génétique , Humains , Études rétrospectives , Europe/épidémiologie , Gonorrhée/épidémiologie , Gonorrhée/traitement médicamenteux , Gonorrhée/microbiologie , Mâle , Antibactériens/pharmacologie , Antibactériens/usage thérapeutique , Résistance bactérienne aux médicaments/génétique , Femelle , Adulte , Génome bactérien/génétique , Adulte d'âge moyen , Jeune adulte , Génomique , Azithromycine/pharmacologie , Azithromycine/usage thérapeutique , Adolescent
20.
Infect Immun ; 92(5): e0000424, 2024 May 07.
Article de Anglais | MEDLINE | ID: mdl-38563734

RÉSUMÉ

Neisseria gonorrhoeae, a human restricted pathogen, releases inflammatory peptidoglycan (PG) fragments that contribute to the pathophysiology of pelvic inflammatory disease. The genus Neisseria is also home to multiple species of human- or animal-associated Neisseria that form part of the normal microbiota. Here we characterized PG release from the human-associated nonpathogenic species Neisseria lactamica and Neisseria mucosa and animal-associated Neisseria from macaques and wild mice. An N. mucosa strain and an N. lactamica strain were found to release limited amounts of the proinflammatory monomeric PG fragments. However, a single amino acid difference in the PG fragment permease AmpG resulted in increased PG fragment release in a second N. lactamica strain examined. Neisseria isolated from macaques also showed substantial release of PG monomers. The mouse colonizer Neisseria musculi exhibited PG fragment release similar to that seen in N. gonorrhoeae with PG monomers being the predominant fragments released. All the human-associated species were able to stimulate NOD1 and NOD2 responses. N. musculi was a poor inducer of mouse NOD1, but ldcA mutation increased this response. The ability to genetically manipulate N. musculi and examine effects of different PG fragments or differing amounts of PG fragments during mouse colonization will lead to a better understanding of the roles of PG in Neisseria infections. Overall, we found that only some nonpathogenic Neisseria have diminished release of proinflammatory PG fragments, and there are differences even within a species as to types and amounts of PG fragments released.


Sujet(s)
Neisseria , Protéine adaptatrice de signalisation NOD1 , Protéine adaptatrice de signalisation NOD2 , Peptidoglycane , Animaux , Humains , Souris , Protéines bactériennes/métabolisme , Protéines bactériennes/génétique , Protéines de transport membranaire , Neisseria/génétique , Neisseria gonorrhoeae/immunologie , Neisseria gonorrhoeae/génétique , Neisseria gonorrhoeae/métabolisme , Protéine adaptatrice de signalisation NOD1/métabolisme , Protéine adaptatrice de signalisation NOD1/génétique , Protéine adaptatrice de signalisation NOD2/métabolisme , Protéine adaptatrice de signalisation NOD2/génétique , Peptidoglycane/métabolisme
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