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1.
Arq Bras Oftalmol ; 88(2): e20230078, 2024.
Article de Anglais | MEDLINE | ID: mdl-39319907

RÉSUMÉ

We present the case of a 37-year-old woman who underwent bilateral penetrating keratoplasty for congenital hereditary endothelial dystrophy at the age of 10 years. Over the subsequent 27 years, the patient's vision slowly deteriorated. Our examination revealed decompensation of the right corneal graft. We addressed this with regraft surgery. We then learned that the patient had been suffering from progressive hearing loss since adolescence. Tonal audiometry revealed hearing per ceptive deafness of 25 dB, which was more prominent in the left ear. Because the patterns of progressive sensorineural hearing loss and congenital hereditary endothelial dystrophy have both been linked to the same gene, slc4a11, we tested our patient for mutations in this gene. The test was positive for a heterozygous slc4a11 gene fifth exon mutation on chromosome 20p13-p12, which causes a frameshift. A combined clinical and genetic evaluation confirmed a diagnosis of Harboyan syndrome. After the genetic diagnosis of the disease, she was evaluated for the need for a hearing aid due to her hearing loss. The patient was also informed about genetic counseling.


Sujet(s)
Dystrophies héréditaires de la cornée , Surdité neurosensorielle , Humains , Femelle , Surdité neurosensorielle/génétique , Adulte , Dystrophies héréditaires de la cornée/génétique , Transporteurs d'anions/génétique , Syndrome , Mutation avec décalage du cadre de lecture/génétique , Antiports
2.
New Phytol ; 238(1): 169-185, 2023 04.
Article de Anglais | MEDLINE | ID: mdl-36716782

RÉSUMÉ

Root hairs (RH) are excellent model systems for studying cell size and polarity since they elongate several hundred-fold their original size. Their tip growth is determined both by intrinsic and environmental signals. Although nutrient availability and temperature are key factors for a sustained plant growth, the molecular mechanisms underlying their sensing and downstream signaling pathways remain unclear. We use genetics to address the roles of the cell surface receptor kinase FERONIA (FER) and the nutrient sensing TOR Complex 1 (TORC) in RH growth. We identified that low temperature (10°C) triggers a strong RH elongation response in Arabidopsis thaliana involving FER and TORC. We found that FER is required to perceive limited nutrient availability caused by low temperature. FERONIA interacts with and activates TORC-downstream components to trigger RH growth. In addition, the small GTPase Rho of plants 2 (ROP2) is also involved in this RH growth response linking FER and TOR. We also found that limited nitrogen nutrient availability can mimic the RH growth response at 10°C in a NRT1.1-dependent manner. These results uncover a molecular mechanism by which a central hub composed by FER-ROP2-TORC is involved in the control of RH elongation under low temperature and nitrogen deficiency.


Sujet(s)
Protéines d'Arabidopsis , Arabidopsis , Arabidopsis/métabolisme , Nitrates/pharmacologie , Nitrates/métabolisme , Protéines d'Arabidopsis/métabolisme , Température , Phosphotransferases/métabolisme , Azote/métabolisme , Racines de plante/métabolisme , Protéines végétales/métabolisme , Transporteurs d'anions/métabolisme
3.
Cornea ; 41(8): 1053-1057, 2022 Aug 01.
Article de Anglais | MEDLINE | ID: mdl-35439766

RÉSUMÉ

PURPOSE: The purpose of this study was to describe the genotypic and phenotypic characteristics of an infant with a SLC4A11 mutation associated with bilateral corneal edema, hearing loss, and hydronephrosis present since birth. METHODS: This was a case report. Ophthalmic and systemic examination of the proband, histopathologic and ultrastructural characteristics of bilateral corneal discs, and molecular genetic evaluation by whole-exome sequencing are described. RESULTS: A male infant was born with bilateral corneal opacities, sensorineural hearing loss, and hydronephrosis to healthy parents after an uneventful pregnancy. Penetrating keratoplasty of the left eye at age 10 months demonstrated minimal corneal edema with normal thickness Descemet membrane and cellular endothelium with intracytoplasmic vacuoles and degenerative changes in rare cells. Penetrating keratoplasty of the right eye 6 months later disclosed prominent corneal edema with a thickened posterior banded layer of Descemet membrane and severe endothelial atrophy. Whole-exome sequencing of the proband and parents' blood demonstrated a homozygous mutation in SLC4A11 gene (c.1735_1737delCTC,p.Leu579del). The combined clinical, histopathologic, and molecular genetic findings raised consideration of an unusual phenotype of Harboyan syndrome manifesting as congenital hereditary endothelial dystrophy with a prelingual rather than, as previously described, postlingual hearing loss. CONCLUSIONS: We report a novel homozygous SLC4A11 variant with a previously undocumented phenotype of CHED in association with prelingual sensorineural hearing loss and hydronephrosis, thus broadening our understanding of the spectrum of genotypic and phenotypic findings of Harboyan syndrome.


Sujet(s)
Dystrophies héréditaires de la cornée , Oedème cornéen , Surdité neurosensorielle , Hydronéphrose , Transporteurs d'anions/génétique , Antiports/génétique , Dystrophies héréditaires de la cornée/diagnostic , Dystrophies héréditaires de la cornée/génétique , Dystrophies héréditaires de la cornée/chirurgie , Oedème cornéen/chirurgie , Études d'associations génétiques , Surdité neurosensorielle/diagnostic , Surdité neurosensorielle/génétique , Humains , Mâle
4.
EMBO Rep ; 22(9): e51813, 2021 09 06.
Article de Anglais | MEDLINE | ID: mdl-34357701

RÉSUMÉ

Nitrate commands genome-wide gene expression changes that impact metabolism, physiology, plant growth, and development. In an effort to identify new components involved in nitrate responses in plants, we analyze the Arabidopsis thaliana root phosphoproteome in response to nitrate treatments via liquid chromatography coupled to tandem mass spectrometry. 176 phosphoproteins show significant changes at 5 or 20 min after nitrate treatments. Proteins identified by 5 min include signaling components such as kinases or transcription factors. In contrast, by 20 min, proteins identified were associated with transporter activity or hormone metabolism functions, among others. The phosphorylation profile of NITRATE TRANSPORTER 1.1 (NRT1.1) mutant plants was significantly altered as compared to wild-type plants, confirming its key role in nitrate signaling pathways that involves phosphorylation changes. Integrative bioinformatics analysis highlights auxin transport as an important mechanism modulated by nitrate signaling at the post-translational level. We validated a new phosphorylation site in PIN2 and provide evidence that it functions in primary and lateral root growth responses to nitrate.


Sujet(s)
Protéines d'Arabidopsis , Arabidopsis , Transporteurs d'anions , Arabidopsis/génétique , Arabidopsis/métabolisme , Protéines d'Arabidopsis/génétique , Protéines d'Arabidopsis/métabolisme , Mutation , Nitrates/métabolisme , Protéines végétales/génétique , Racines de plante/génétique , Racines de plante/métabolisme
5.
BMC Plant Biol ; 21(1): 300, 2021 Jun 29.
Article de Anglais | MEDLINE | ID: mdl-34187360

RÉSUMÉ

BACKGROUND: A major limiting factor for plant growth is the aluminum (Al) toxicity in acidic soils, especially in tropical regions. The exclusion of Al from the root apex through root exudation of organic acids such as malate and citrate is one of the most ubiquitous tolerance mechanisms in the plant kingdom. Two families of anion channels that confer Al tolerance are well described in the literature, ALMT and MATE family. RESULTS: In this study, sugarcane plants constitutively overexpressing the Sorghum bicolor MATE gene (SbMATE) showed improved tolerance to Al when compared to non-transgenic (NT) plants, characterized by sustained root growth and exclusion of aluminum from the root apex based on the result obtained with hematoxylin staining. In addition, genome-wide analysis of the recently released sugarcane genome identified 11 ALMT genes and molecular studies showed potential new targets for aluminum tolerance. CONCLUSIONS: Our results indicate that the transgenic plants overexpressing the Sorghum bicolor MATE has an improved tolerance to Al. The expression profile of ALMT genes revels potential candidate genes to be used has an alternative for agricultural expansion in Brazil and other areas with aluminum toxicity in poor and acid soils.


Sujet(s)
Aluminium/métabolisme , Transporteurs d'anions/génétique , Gènes de plante/génétique , Protéines végétales/génétique , Saccharum/génétique , Aluminium/toxicité , Transporteurs d'anions/métabolisme , Régulation de l'expression des gènes végétaux , Gènes de plante/physiologie , Étude d'association pangénomique , Phylogenèse , Protéines végétales/métabolisme , Racines de plante/métabolisme , Végétaux génétiquement modifiés , Saccharum/métabolisme , Sorghum/génétique , Sorghum/métabolisme , Transcriptome
6.
mBio ; 12(2)2021 04 06.
Article de Anglais | MEDLINE | ID: mdl-33824204

RÉSUMÉ

Pyruvate is the final metabolite of glycolysis and can be converted into acetyl coenzyme A (acetyl-CoA) in mitochondria, where it is used as the substrate for the tricarboxylic acid cycle. Pyruvate availability in mitochondria depends on its active transport through the heterocomplex formed by the mitochondrial pyruvate carriers 1 and 2 (MPC1/MPC2). We report here studies on MPC1/MPC2 of Trypanosoma cruzi, the etiologic agent of Chagas disease. Endogenous tagging of T. cruziMPC1 (TcMPC1) and TcMPC2 with 3×c-Myc showed that both encoded proteins colocalize with MitoTracker to the mitochondria of epimastigotes. Individual knockout (KO) of TcMPC1 and TcMPC2 genes using CRISPR/Cas9 was confirmed by PCR and Southern blot analyses. Digitonin-permeabilized TcMPC1-KO and TcMPC2-KO epimastigotes showed reduced O2 consumption rates when pyruvate, but not succinate, was used as the mitochondrial substrate, while α-ketoglutarate increased their O2 consumption rates due to an increase in α-ketoglutarate dehydrogenase activity. Defective mitochondrial pyruvate import resulted in decreased Ca2+ uptake. The inhibitors UK5099 and malonate impaired pyruvate-driven oxygen consumption in permeabilized control cells. Inhibition of succinate dehydrogenase by malonate indicated that pyruvate needs to be converted into succinate to increase respiration. TcMPC1-KO and TcMPC2-KO epimastigotes showed little growth differences in standard or low-glucose culture medium. However, the ability of trypomastigotes to infect tissue culture cells and replicate as intracellular amastigotes was decreased in TcMPC-KOs. Overall, T. cruzi MPC1 and MPC2 are essential for cellular respiration in the presence of pyruvate, invasion of host cells, and replication of amastigotes.IMPORTANCETrypanosoma cruzi is the causative agent of Chagas disease. Pyruvate is the end product of glycolysis, and its transport into the mitochondrion is mediated by the mitochondrial pyruvate carrier (MPC) subunits. Using the CRISPR/Cas9 technique, we generated individual T. cruziMPC1 (TcMPC1) and TcMPC2 knockouts and demonstrated that they are essential for pyruvate-driven respiration. Interestingly, although glycolysis was reported as not an important source of energy for the infective stages, MPC was essential for normal host cell invasion and intracellular replication.


Sujet(s)
Transporteurs d'anions/génétique , Protéines de transport de la membrane mitochondriale/génétique , Protéines de protozoaire/génétique , Acide pyruvique/métabolisme , Trypanosoma cruzi/génétique , Trypanosoma cruzi/métabolisme , Transporteurs d'anions/métabolisme , Transport biologique , Systèmes CRISPR-Cas , Réplication de l'ADN , Techniques de knock-out de gènes , Protéines de protozoaire/métabolisme , Trypanosoma cruzi/pathogénicité
7.
BMC Plant Biol ; 20(1): 343, 2020 Jul 21.
Article de Anglais | MEDLINE | ID: mdl-32693791

RÉSUMÉ

BACKGROUND: Early seed germination and a functional root system development during establishment are crucial attributes contributing to nutrient competence under marginal nutrient soil conditions. Chenopodium quinoa Willd (Chenopodiaceae) is a rustic crop, able to grow in marginal areas. Altiplano and Coastal/Lowlands are two representative zones of quinoa cultivation in South America with contrasting soil fertility and edaphoclimatic conditions. In the present work, we hypothesize that the ecotypes of Quinoa from Altiplano (landrace Socaire) and from Coastal/Lowland (landrace Faro) have developed differential adaptive responses in order to survive under conditions of low availability of N in their respective climatic zones of Altiplano and Lowlands. In order to understand intrinsic differences for N competence between landraces, seed metabolite profile and germinative capacity were studied. Additionally, in order to elucidate the mechanisms of N uptake and assimilation at limiting N conditions during establishment, germinated seeds of both landraces were grown at either sufficient nitrate (HN) or low nitrate (LN) supply. We studied the photosynthetic performance, protein storage, root morphometrical parameters, activity and expression of N-assimilating enzymes, and the expression of nitrate transporters of roots in plants submitted to the different treatments. RESULTS: Seeds from Socaire landrace presented higher content of free N-related metabolites and faster seed germination rate compared to Faro landrace. Seedlings of both ecotypes presented similar physiological performance at HN supply, but at LN supply their differences were exalted. At LN, Socaire plants showed an increased root biomass (including a higher number and total length of lateral roots), a differential regulation of a nitrate transporter (a NPF6.3-like homologue) belonging to the Low Affinity Transport System (LATS), and an upregulation of a nitrate transporter (a NRT2.1-like homologue) belonging to the High Affinity nitrate Transport System (HATS) compared to Faro. These responses as a whole could be linked to a higher amount of stored proteins in leaves, associated to an enhanced photochemical performance in Altiplano plants, in comparison to Lowland quinoa plants. CONCLUSIONS: These differential characteristics of Socaire over Faro plants could involve an adaptation to enhanced nitrate uptake under the brutal unfavorable climate conditions of Altiplano.


Sujet(s)
Chenopodium quinoa/métabolisme , Azote/métabolisme , Plant/métabolisme , Graines/métabolisme , Transporteurs d'anions/génétique , Transporteurs d'anions/métabolisme , Chenopodium quinoa/génétique , Chenopodium quinoa/croissance et développement , Chili , Écotype , Régulation de l'expression des gènes végétaux , Germination , Glutamate-ammonia ligase/métabolisme , Nitrate reductase/métabolisme , Transporteurs de nitrate , Nitrates/métabolisme , Phylogenèse , Protéines végétales/génétique , Protéines végétales/métabolisme , Racines de plante/métabolisme , Plant/croissance et développement , Graines/physiologie
8.
Elife ; 92020 03 06.
Article de Anglais | MEDLINE | ID: mdl-32142409

RÉSUMÉ

Mitochondria generate ATP and building blocks for cell growth and regeneration, using pyruvate as the main substrate. Here we introduce PyronicSF, a user-friendly GFP-based sensor of improved dynamic range that enables real-time subcellular quantitation of mitochondrial pyruvate transport, concentration and flux. We report that cultured mouse astrocytes maintain mitochondrial pyruvate in the low micromolar range, below cytosolic pyruvate, which means that the mitochondrial pyruvate carrier MPC is poised to exert ultrasensitive control on the balance between respiration and anaplerosis/gluconeogenesis. The functionality of the sensor in living tissue is demonstrated in the brain of Drosophila melanogaster larvae. Mitochondrial subpopulations are known to coexist within a given cell, which differ in their morphology, mobility, membrane potential, and vicinity to other organelles. The present tool can be used to investigate how mitochondrial diversity relates to metabolism, to study the role of MPC in disease, and to screen for small-molecule MPC modulators.


Sujet(s)
Transporteurs d'anions/métabolisme , Techniques de biocapteur , Protéines de Drosophila/métabolisme , Mitochondries/métabolisme , Protéines de transport de la membrane mitochondriale/métabolisme , Transporteurs d'acides monocarboxyliques/métabolisme , Acide pyruvique/métabolisme , Animaux , Transporteurs d'anions/génétique , Cellules COS , Lignée cellulaire , Chlorocebus aethiops , Protéines de Drosophila/génétique , Drosophila melanogaster , Cellules HEK293 , Cellules HeLa , Humains , Larve/métabolisme , Souris , Protéines de transport de la membrane mitochondriale/génétique , Modèles biologiques , Transporteurs d'acides monocarboxyliques/génétique
9.
BMC Microbiol ; 19(1): 79, 2019 04 16.
Article de Anglais | MEDLINE | ID: mdl-30991951

RÉSUMÉ

BACKGROUND: Phosphate is a fundamental nutrient for all creatures. It is thus not surprising that a single bacterium carries different transport systems for this molecule, each usually operating under different environmental conditions. The phosphonate transport system of E. coli K-12 is cryptic due to an 8 bp insertion in the phnE ORF. RESULTS: Here we report that an E. coli K-12 strain carrying the triple knockout ΔpitA Δpst Δugp reverted the phnE mutation when plated on complex medium containing phosphate as the main phosphorus source. It is also shown that PhnCDE takes up orthophosphate with transport kinetics compatible with that of the canonical transport system PitA and that Pi-uptake via PhnCDE is sufficient to enable bacterial growth. Ugp, a glycerol phosphate transporter, is unable to take up phosphate. CONCLUSIONS: The phosphonate transport system, which is normally cryptic in E. coli laboratory strains is activated upon selection in rich medium and takes up orthophosphate in the absence of the two canonical phosphate-uptake systems. Based on these findings, the PhnCDE system can be considered a genuine phosphate transport system.


Sujet(s)
Protéines Escherichia coli/génétique , Escherichia coli/métabolisme , Protéines de transport membranaire/génétique , Protéines de transport du phosphate/génétique , Phosphates/métabolisme , Transporteurs d'anions/génétique , Protéines de transport/génétique , Escherichia coli/génétique , Régulation de l'expression des gènes bactériens , Techniques de knock-out de gènes , Mutation
10.
Ophthalmic Genet ; 40(2): 91-98, 2019 04.
Article de Anglais | MEDLINE | ID: mdl-30856043

RÉSUMÉ

BACKGROUND: Corneal Dystrophy and Perceptive Deafness (CDPD) or Harboyan syndrome is an autosomal recessive rare disorder, characterized by congenital corneal opacities and progressive sensorineural hearing loss, which usually begins after the second decades of life. This study reports the ophthalmic, audiological and genetic features, in five CDPD affected patients from three Chilean families. MATERIALS AND METHODS: Five individuals affected with CDPD from three unrelated Chilean families were clinically and genetically examined. To evaluate a putative founder mutation 7 SNPs were analyzed in the three families, an Argentinian patient (carrier of the same mutation previously reported) and 87 Chilean controls. RESULTS: The ophthalmic symptoms in the five patients were bilateral and symmetric, starting before one year of age, and visual acuity varied from 0.1 to 0.3. In all cases, hearing loss began over 8 years old. The sequence of the 19 exons of SLC4A11 gene of all the affected patients exhibited homozygous eight nucleotide sequence duplication (c.2233_2240dup TATGACAC, p.(Ile748Metfs*5)) at the end of exon 16. All the affected patients of the three families were homozygous for a haplotype composed of five SNPs and covering 4,1 Mb. The same haplotype was present in one allele of the heterozygous Argentinean patient and has a frequency of 2.76% in Chilean population. CONCLUSIONS: The five CDPD patients were homozygous for the same mutation in the SLC4A11 gene. Haplotype analysis of all the affected, including the case reported from Argentina was in accordance with a founder mutation.


Sujet(s)
Transporteurs d'anions/génétique , Antiports/génétique , Dystrophies héréditaires de la cornée/diagnostic , Dystrophies héréditaires de la cornée/génétique , Effet fondateur , Duplication de gène/génétique , Surdité neurosensorielle/diagnostic , Surdité neurosensorielle/génétique , Polymorphisme de nucléotide simple , Adolescent , Adulte , Sujet âgé , Audiométrie , Appariement de bases , Enfant , Consanguinité , Analyse de mutations d'ADN , Exons/génétique , Femelle , Haplotypes , Hétérozygote , Homozygote , Humains , Mâle , Pedigree , Acuité visuelle/physiologie , Jeune adulte
11.
Proc Natl Acad Sci U S A ; 116(1): 313-318, 2019 01 02.
Article de Anglais | MEDLINE | ID: mdl-30545913

RÉSUMÉ

Acidic soils, where aluminum (Al) toxicity is a major agricultural constraint, are globally widespread and are prevalent in developing countries. In sorghum, the root citrate transporter SbMATE confers Al tolerance by protecting root apices from toxic Al3+, but can exhibit reduced expression when introgressed into different lines. We show that allele-specific SbMATE transactivation occurs and is caused by factors located away from SbMATE Using expression-QTL mapping and expression genome-wide association mapping, we establish that SbMATE transcription is controlled in a bipartite fashion, primarily in cis but also in trans Multiallelic promoter transactivation and ChIP analyses demonstrated that intermolecular effects on SbMATE expression arise from a WRKY and a zinc finger-DHHC transcription factor (TF) that bind to and trans-activate the SbMATE promoter. A haplotype analysis in sorghum RILs indicates that the TFs influence SbMATE expression and Al tolerance. Variation in SbMATE expression likely results from changes in tandemly repeated cis sequences flanking a transposable element (a miniature inverted repeat transposable element) insertion in the SbMATE promoter, which are recognized by the Al3+-responsive TFs. According to our model, repeat expansion in Al-tolerant genotypes increases TF recruitment and, hence, SbMATE expression, which is, in turn, lower in Al-sensitive genetic backgrounds as a result of lower TF expression and fewer binding sites. We thus show that even dominant cis regulation of an agronomically important gene can be subjected to precise intermolecular fine-tuning. These concerted cis/trans interactions, which allow the plant to sense and respond to environmental cues, such as Al3+ toxicity, can now be used to increase yields and food security on acidic soils.


Sujet(s)
Aluminium/toxicité , Transporteurs d'anions/métabolisme , Protéines végétales/métabolisme , Racines de plante/effets des médicaments et des substances chimiques , Sorghum/effets des médicaments et des substances chimiques , Transporteurs d'anions/génétique , Chromosomes de plante/génétique , Régulation de l'expression des gènes végétaux , Protéines végétales/génétique , Racines de plante/métabolisme , Régions promotrices (génétique)/génétique , Locus de caractère quantitatif/génétique , Sorghum/génétique , Sorghum/métabolisme , Séquences répétées en tandem/génétique , Facteurs de transcription/génétique , Facteurs de transcription/métabolisme
12.
Int J Mol Sci ; 19(12)2018 Dec 07.
Article de Anglais | MEDLINE | ID: mdl-30544504

RÉSUMÉ

Grafting has become a common practice among tomato growers to obtain vigorous plants. These plants present a substantial increase in nitrogen (N) uptake from the root zone. However, the mechanisms involved in this higher uptake capacity have not been investigated. To elucidate whether the increase in N uptake in grafted tomato plants under high N demand conditions is related to the functioning of low- (high capacity) or high-affinity (low capacity) root plasma membrane transporters, a series of experiments were conducted. Plants grafted onto a vigorous rootstock, as well as ungrafted and homograft plants, were exposed to two radiation levels (400 and 800 µmol m-2 s-1). We assessed root plasma membrane nitrate transporters (LeNRT1.1, LeNRT1.2, LeNRT2.1, LeNRT2.2 and LeNRT2.3) expression, Michaelis‒Menten kinetics parameters (Vmax and Km), root and leaf nitrate reductase activity, and root respiration rates. The majority of nitrate uptake is mediated by LeNRT1.1 and LeNRT1.2 in grafted and ungrafted plants. Under high N demand conditions, vigorous rootstocks show similar levels of expression for LeNRT1.1 and LeNRT1.2, whereas ungrafted plants present a higher expression of LeNRT1.2. No differences in the uptake capacity (evaluated as Vmax), root respiration rates, or root nitrate assimilation capacity were found among treatments.


Sujet(s)
Nitrates/métabolisme , Azote/métabolisme , Solanum lycopersicum/métabolisme , Transporteurs d'anions/métabolisme , Transporteurs de nitrate , Feuilles de plante/métabolisme , Protéines végétales/métabolisme , Racines de plante/métabolisme
13.
Genet Mol Res ; 15(1)2016 Jan 26.
Article de Anglais | MEDLINE | ID: mdl-26909921

RÉSUMÉ

In this study, the nitrate transporter gene CmNRT1 was isolated from the chrysanthemum variety 'Nannongxuefeng'. The full-length cDNA contains an open reading frame of 1761 bp encoding 587 residues. Using qRT-PCR, we found that CmNRT1 was induced by 10 mM NO3(-) in roots and shoots. Two Arabidopsis thaliana transgenic plants expressing CmNRT1 were selected for functional analyses. Root (15)N influx in wild-type and transgenic A. thaliana lines under 10 or 0.2 mM (15)NO3 was tested. Our results indicate that CmNRT1 encodes a constitutive component for a low-affinity transporter.


Sujet(s)
Transporteurs d'anions/métabolisme , Chrysanthemum/métabolisme , Protéines végétales/métabolisme , Racines de plante/métabolisme , Séquence d'acides aminés , Transporteurs d'anions/composition chimique , Transporteurs d'anions/génétique , Transporteurs d'anions/isolement et purification , Arabidopsis/génétique , Données de séquences moléculaires , Transporteurs de nitrate , Phylogenèse , Protéines végétales/composition chimique , Végétaux génétiquement modifiés , Alignement de séquences
14.
Plant Physiol ; 169(2): 1397-404, 2015 Oct.
Article de Anglais | MEDLINE | ID: mdl-26304850

RÉSUMÉ

Understanding how plants sense and respond to changes in nitrogen availability is the first step toward developing strategies for biotechnological applications, such as improvement of nitrogen use efficiency. However, components involved in nitrogen signaling pathways remain poorly characterized. Calcium is a second messenger in signal transduction pathways in plants, and it has been indirectly implicated in nitrate responses. Using aequorin reporter plants, we show that nitrate treatments transiently increase cytoplasmic Ca(2+) concentration. We found that nitrate also induces cytoplasmic concentration of inositol 1,4,5-trisphosphate. Increases in inositol 1,4,5-trisphosphate and cytoplasmic Ca(2+) levels in response to nitrate treatments were blocked by U73122, a pharmacological inhibitor of phospholipase C, but not by the nonfunctional phospholipase C inhibitor analog U73343. In addition, increase in cytoplasmic Ca(2+) levels in response to nitrate treatments was abolished in mutants of the nitrate transceptor NITRATE TRANSPORTER1.1/Arabidopsis (Arabidopsis thaliana) NITRATE TRANSPORTER1 PEPTIDE TRANSPORTER FAMILY6.3. Gene expression of nitrate-responsive genes was severely affected by pretreatments with Ca(2+) channel blockers or phospholipase C inhibitors. These results indicate that Ca(2+) acts as a second messenger in the nitrate signaling pathway of Arabidopsis. Our results suggest a model where NRT1.1/AtNPF6.3 and a phospholipase C activity mediate the increase of Ca(2+) in response to nitrate required for changes in expression of prototypical nitrate-responsive genes.


Sujet(s)
Arabidopsis/métabolisme , Signalisation calcique/physiologie , Nitrates/métabolisme , Transporteurs d'anions/génétique , Transporteurs d'anions/métabolisme , Arabidopsis/effets des médicaments et des substances chimiques , Arabidopsis/génétique , Calcium/métabolisme , Cytosol/métabolisme , Régulation de l'expression des gènes végétaux , Inositol 1,4,5-trisphosphate/métabolisme , Nitrates/pharmacologie , Phosphatidyl inositols/métabolisme , Protéines végétales/génétique , Protéines végétales/métabolisme , Racines de plante/effets des médicaments et des substances chimiques , Racines de plante/métabolisme , Végétaux génétiquement modifiés , Transduction du signal , Type C Phospholipases/métabolisme
15.
Plant Signal Behav ; 9(3): e28501, 2014.
Article de Anglais | MEDLINE | ID: mdl-24642706

RÉSUMÉ

Nitrogen is an essential macronutrient for plants and its availability is a major limiting factor for plant growth and crop production. Nitrate is the main source of inorganic N for plants in aerobic soils and can act as a potent signal to control global gene expression. We found that gene expression in response to nitrate treatment of the AFB3 auxin receptor and its target, the NAC4 transcription factor depends on the nitrate transport function of NRT1.1. This gene regulatory function of NRT1.1 on AFB3 and NAC4 differs from the previously described signaling function controlling NRT2.1, NIA1 and NIA2 transcript levels and root colonization of nitrate-rich patches. Our work suggests two different signaling pathways may exist to control gene expression in response to nitrate downstream of NRT1.1.


Sujet(s)
Transporteurs d'anions/métabolisme , Arabidopsis/métabolisme , Régulation de l'expression des gènes végétaux , Nitrates/métabolisme , Protéines végétales/métabolisme , Racines de plante/métabolisme , Transporteurs d'anions/génétique , Arabidopsis/génétique , Protéines d'Arabidopsis/métabolisme , Protéines végétales/génétique , Récepteurs de surface cellulaire/métabolisme , Facteurs de transcription/métabolisme
16.
Am J Med Genet A ; 161A(8): 2088-94, 2013 Aug.
Article de Anglais | MEDLINE | ID: mdl-23840040

RÉSUMÉ

Mutations in solute carrier family 26 (sulfate transporter), member 2 (SLC26A2) gene result in a spectrum of autosomal recessive chondrodysplasias that range from the mildest recessive form of multiple epiphysial dysplasia (rMED) through the most common diastrophic dysplasia (DTD) to lethal atelosteogenesis type II and achondrogenesis IB. The clinical variability has been ascribed to quantitative effect of mutations of the sulfate transporter activity. Here we describe two Brazilian sisters, born to healthy and non consanguineous parents, with Robin sequence, mild shortening of upper and lower limbs, brachymetacarpalia/tarsalia, additional and accelerated carpal ossification, marked genu valgum, and multiple epiphysial dysplasia. This phenotype was intermediate between DTD and rMED, and both girls have a compound heterozygous mutations for the SLC26A2, a Finnish founder mutation (c.-26 + 2T>C), and R279W. This combination of mutations has been observed in individuals with different phenotypes, including DTD, DTD variant, and rMED. The distinct phenotype of our cases reinforces the hypothesis that other factors may be influencing the phenotype as previously suggested.


Sujet(s)
Transporteurs d'anions/génétique , Os du carpe/anatomopathologie , Nanisme/génétique , Membres/anatomopathologie , Mutation/génétique , Ostéogenèse , Syndrome de Pierre Robin/génétique , Adulte , Brésil , Enfant , Nanisme/diagnostic , Femelle , Hétérozygote , Humains , Mâle , Ostéochondrodysplasies , Phénotype , Syndrome de Pierre Robin/diagnostic , Fratrie , Transporteurs de sulfate
17.
Environ Microbiol Rep ; 5(3): 353-66, 2013 Jun.
Article de Anglais | MEDLINE | ID: mdl-23754716

RÉSUMÉ

Fungal nitrogen metabolism plays a fundamental role in function of mycorrhizal symbiosis and consequently in nutrient cycling of terrestrial ecosystems. Despite its global ecological relevance the information on control and molecular regulation of nitrogen utilization in mycorrhizal fungi is very limited. We have extended the nitrate utilization RNA silencing studies of the model mycorrhizal basidiomycete, Laccaria bicolor, by altering the expression of LbNrt, the sole nitrate transporter-encoding gene of the fungus. Here we report the first nutrient transporter mutants for mycorrhizal fungi. Silencing of LbNrt results in fungal strains with minimal detectable LbNrt transcript levels, significantly reduced growth capacity on nitrate and altered symbiotic interaction with poplar. Transporter silencing also creates marked co-downregulation of whole Laccaria fHANT-AC (fungal high-affinity nitrate assimilation cluster). Most importantly, this effect on the nitrate utilization pathway appears independent of extracellular nitrate or nitrogen status of the fungus. Our results indicate a novel and central nitrate uptake-independent regulatory role for a eukaryotic nitrate transporter. The possible cellular mechanisms behind this regulation mode are discussed in the light of current knowledge on NRT2-type nitrate transporters in different eukaryotes.


Sujet(s)
Transporteurs d'anions/génétique , Protéines fongiques/génétique , Régulation de l'expression des gènes fongiques , Laccaria/génétique , Mycorhizes/génétique , ARN fongique/génétique , Transporteurs d'anions/antagonistes et inhibiteurs , Transporteurs d'anions/métabolisme , Protéines fongiques/antagonistes et inhibiteurs , Protéines fongiques/métabolisme , Laccaria/métabolisme , Mycorhizes/métabolisme , Transporteurs de nitrate , Nitrates/métabolisme , Azote/métabolisme , Populus/microbiologie , Interférence par ARN , ARN fongique/antagonistes et inhibiteurs , ARN fongique/métabolisme , Petit ARN interférent/génétique , Petit ARN interférent/métabolisme , Symbiose/physiologie
18.
Invest Ophthalmol Vis Sci ; 54(3): 2207-15, 2013 Mar 01.
Article de Anglais | MEDLINE | ID: mdl-23462747

RÉSUMÉ

PURPOSE: Keratoconus (KTCN) is a thinning and anterior protrusion of the cornea that results in altered refractive powers and loss of visual acuity. Despite numerous studies, the reasons for development and progression of KTCN remain unknown. Genetic studies have led to identification of several loci linked with KTCN, including a locus in one multigenerational Ecuadorian family. The purpose of this study was to identify sequence variants in candidate genes segregating with the KTCN phenotype in another Ecuadorian family. METHODS: Nonparametric linkage analysis was performed in Ecuadorian family KTCN-019. Candidate genes IL1A, IL1B, IL1RN, and SLC4A11 were selected and examined in this family by direct sequencing of all exons, promoters, and intron-exon junctions. RESULTS: Two novel suggestive loci were identified in 2q13-q14.3 and 20p13-p12.2. Screening of the candidate genes revealed 66 sequence variants, including five novel variants, in both coding and noncoding regions. The substitution c.214+242C > T in the IL1RN gene was observed in all affected individuals and three apparently unaffected family members. The novel deletion of 54 nucleotides in position c.2558+149_2558+203 in SLC4A11 was observed in all patients but one, as well as two healthy individuals and one person with an unknown phenotype. CONCLUSIONS: The analyses of selected genes have led to identification of numerous sequence variants in the examined Ecuadorian family. Both substitution c.214+242C > T in IL1RN and novel deletion c.2558+149_2558+203del54 in SLC4A11 were observed significantly more frequently in family members with KTCN (P = 0.004525 and P = 0.00761, respectively), suggesting involvement of these two genes in KTCN etiology in the studied family.


Sujet(s)
Substitution d'acide aminé/génétique , Transporteurs d'anions/génétique , Antiports/génétique , Antagoniste du récepteur à l'interleukine-1/génétique , Kératocône/génétique , Asiatiques/génétique , Analyse de mutations d'ADN , Équateur , Liaison génétique , Humains , Mutation , Pedigree , Phénotype , Délétion de séquence
19.
Pflugers Arch ; 465(8): 1087-99, 2013 Aug.
Article de Anglais | MEDLINE | ID: mdl-23440457

RÉSUMÉ

A comparative analysis of a hyperpolarization-activated ion current present in amphibian oocytes was performed using the two-electrode voltage-clamp technique in Xenopus laevis, Xenopus tropicalis, and Ambystoma mexicanum. This current appears to be driven mainly by Cl(-) ions, is independent of Ca(2+), and is made evident by applying extremely negative voltage pulses; it shows a slow activating phase and little or no desensitization. The pharmacological profile of the current is complex. The different channel blocker used for Cl(-), K(+), Na(+) and Ca(2+) conductances, exhibited various degrees of inhibition depending of the species. The profiles illustrate the intricacy of the components that give rise to this current. During X. laevis oogenesis, the hyperpolarization-activated current is present at all stages of oocytes tested (II-VI), and the amplitude of the current increases from about 50 nA in stage I to more than 1 µA in stage VI; nevertheless, there was no apparent modification of the kinetics. Our results suggest that the hyperpolarization-activated current is present both in order Anura and Urodela oocytes. However, the electrophysiological and pharmacological characteristics are quite perplexing and seem to suggest a mixture of ionic conductances that includes the activation of both anionic and cationic channels, most probably transiently opened due to the extreme hyperpolarizion of the plasma membrane. As a possible mechanism for the generation of the current, a kinetic model which fits the data suggests the opening of pores in the plasma membrane whose ion selectivity is dependent on the extracellular Cl(-) concentration. The extreme voltage conditions could induce the opening of otherwise latent pores in plasma membrane proteins (i.e., carriers), resembling the ´slippage´ events already described for some carriers. These observations should be valuable for other groups trying to express cloned, voltage-dependent ion channels in oocytes of amphibian in which hyperpolarizing voltage pulses are applied to activate the channels.


Sujet(s)
Amphibiens/métabolisme , Amphibiens/physiologie , Canaux ioniques/métabolisme , Potentiels de membrane/physiologie , Ovocytes/métabolisme , Ambystoma mexicanum/métabolisme , Ambystoma mexicanum/physiologie , Animaux , Transporteurs d'anions/métabolisme , Transporteurs de cations/métabolisme , Membrane cellulaire/métabolisme , Membrane cellulaire/physiologie , Phénomènes électrophysiologiques/physiologie , Concentration en ions d'hydrogène , Xenopus laevis/métabolisme , Xenopus laevis/physiologie
20.
Genet Mol Res ; 11(2): 847-54, 2012 Apr 03.
Article de Anglais | MEDLINE | ID: mdl-22576912

RÉSUMÉ

Boron is an important micronutrient in plants and animals. The role of boron in living systems includes coordinated regulation of gene expression, growth and proliferation of higher plants and animals. There are several well-defined genes associated with boron transportation and tolerance in plants and these genes show close homology with human anion exchanger genes. Mutation of these genes also characterizes some genetic disorders. We investigated the toxic effects of boric acid on HEK293 cells and mRNA expression of anion exchanger (SLC4A1, SLC4A2 and SLC4A3) genes. Cytotoxicity of boric acid at different concentrations was tested by using the methylthiazolyldiphenyl-tetrazolium bromide assay. Gene expression profiles were examined using quantitative real-time PCR. In the HEK293 cells, the nontoxic upper concentration of boric acid was 250 µM; more than 500 µM caused cytotoxicity. The 250 µM boric acid concentration increased gene expression level of SLC4A2 up to 8.6-fold and SLC4A3 up to 2.6-fold, after 36-h incubation. There was no significant effect of boric acid on SLC4A1 mRNA expression levels.


Sujet(s)
Transporteurs d'anions/génétique , Antiports/génétique , Acides boriques/pharmacologie , Régulation de l'expression des gènes/effets des médicaments et des substances chimiques , Séquence nucléotidique , Lignée cellulaire , Antiporteurs des ions chlorure-bicarbonate , Amorces ADN , Humains , Réaction de polymérisation en chaine en temps réel , Protéines SLC4A
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