Application of spectroscopic techniques combined with chemometrics to the authenticity and quality attributes of rice.

Rice is a staple food for two-thirds of the world's population and is grown in over a hundred countries around the world. Due to its large scale, it is vulnerable to adulteration. In addition, the quality attribute of rice is an important factor affecting the circulation and price, which is also paid more and more attention. The combination of spectroscopy and chemometrics enables rapid detection of authenticity and quality attributes in rice. This article described the application of seven spectroscopic techniques combined with chemometrics to the rice industry. For a long time, near-infrared spectroscopy and linear chemometric methods (e.g., PLSR and PLS-DA) have been widely used in the rice industry. Although some studies have achieved good accuracy, with models in many studies having greater than 90% accuracy. However, higher accuracy and stability were more likely to be obtained using multiple spectroscopic techniques, nonlinear chemometric methods, and key wavelength selection algorithms. Future research should develop larger rice databases to include more rice varieties and larger amounts of rice depending on the type of rice, and then combine various spectroscopic techniques, nonlinear chemometric methods, and key wavelength selection algorithms. This article provided a reference for a more efficient and accurate determination of rice quality and authenticity.

The differences in metabolites, starch structure, and physicochemical properties of rice were related to the decrease in taste quality under high nitrogen fertilizer application.

Nitrogen fertilizer application is one of the key cultivation practices to improve rice yields. However, the application of high nitrogen fertilizers often leads to a reduction in the stickiness of the rice after cooking, thus reducing the taste quality of rice. Moreover, there are differences in taste quality among rice varieties, and the mechanism has not been studied in depth. In this study, two rice varieties (Meixiangzhan2hao and Exiang2hao) were planted under two nitrogen fertilizer levels. The physicochemical properties and taste quality of the rice were determined after maturity. Our results showed that high nitrogen fertilizer level alters tryptophan metabolism in rice, increasing most amino acid content and protein content in rice. The high content of protein and the higher short-range ordered structure of starch inhibited the gelatinization characteristics of starch and reduced the taste quality of rice. Under high nitrogen fertilizer application, Exiang2hao showed smaller increases in protein content, lower level of amylose and relative crystallinity, and higher content of lipid metabolites. These differences in chemical substances resulted in a less pronounced reduction in the taste quality of Exiang2hao. In this study, the taste quality of different rice varieties under different levels of nitrogen fertilizer application was analyzed, providing new ideas for future improvement of rice taste quality.

Variation of rice starch structure and physicochemical properties in response to high natural temperature during the reproductive stage.

Climate warming affects rice growth at different phenological stages, thereby increasing rice chalkiness and protein content and reducing eating and cooking quality (ECQ). The structural and physicochemical properties of rice starch played important roles in determining rice quality. However, differences in their response to high temperature during the reproductive stage have been rarely studied. In the present study, they were evaluated and compared between two contrasting natural temperature field conditions, namely, high seasonal temperature (HST) and low seasonal temperature (LST), during the reproductive stage of rice in 2017 and 2018. Compared with LST, HST significantly deteriorated rice quality, including increased grain chalkiness, setback, consistence, and pasting temperature and reduced taste values. HST considerably reduced the total starch and increased the protein content. Likewise, HST significantly reduced the short amylopectin chains [degree of polymerization (DP) <12] and increased the long amylopectin chains (DP > 12) and relative crystallinity. The starch structure, total starch content, and protein content explained 91.4%, 90.4%, and 89.2% of the total variations in pasting properties, taste value, and grain chalkiness degree, respectively. In conclusion, we suggested that rice quality variations were closely associated with the changes in chemical composition content (total starch and protein content) and starch structure in response to HST. These results indicated that we should improve the resistance of rice to high temperature during the reproductive stage to improve the fine structure of rice starch in further breeding and practice.

Integrated rice-crayfish farming system does not mitigate the global warming potential during rice season.

Integrated rice-crayfish farming system (RCS) has become increasingly popular in China. However, previous research has largely ignored the effect of trench around the paddy field on GHG emissions, which may cause inaccurate estimation of the global warming potential (GWP) from the system. This study compared the GWP between rice monoculture (RM) and RCS. The results indicated that the field of RCS had significantly lower CH4 emissions compared with RM due to lower mcrA abundance and higher pmoA abundance, while there was no difference in N2O emissions. In addition, the trench resulted in remarkably more CH4 emissions due to higher mcrA abundance and lower pmoA abundance and less N2O emissions than the field in RCS. In general, RCS seems not to mitigate GWP compared with RM due to more CH4 emissions from the trench in the current mode. Furthermore, our results indicate that RCS can reduce GWP relative to RM only when the area ratio of the trench to the system is controlled to be lower than 13.9 %.

Different nitrogen fertilizer application in the field affects the morphology and structure of protein and starch in rice during cooking.

Nitrogen fertilization is one of the most important cultivation practices that affects the eating quality of rice. During the cooking process, nitrogen fertilizer application in the field changed the structure of protein and starch during cooking, which eventually reduced the rice eating quality. However, the morphology and structure of rice during cooking under high nitrogen fertilizer application in the field have not been explored. The relationship between the morphological and structural changes of rice protein and starch during cooking and the rice eating quality has not been studied. In this study, we conducted field trials at two nitrogen fertilizer levels (0 N and 350 N), and the rice was cooked after harvest. Our results showed that the peak viscosity of rice flour was 3326 cp and 2453 cp at 0 N and 350 N, respectively, and the peak viscosity of rice starch was 3424 cp and 3378 cp, respectively. Rice proteins played an important role in the starch gelatinization properties and thermodynamic properties. High nitrogen fertilizer application increased the protein content of rice from 5.97 % to 11.32 %, and more protein bodies adhered to the surface of amyloplasts eventually inhibiting starch gelatinization. The rice proteins could bind to amylose-lipid complexes during cooking, promoting the formation of V-type diffraction peaks. What is more, under high nitrogen fertilizer, rice protein had more ß-sheets, which slowed the entry of water into the interior of starch molecules and prevented the destruction of the short-range ordered structure of starch. Our study provides the possibility to further improve the eating quality of rice under nitrogen fertilizer treatment.

Combination of NIR spectroscopy and algorithms for rapid differentiation between one-year and two-year stored rice.

Storage is necessary for rice to ensure the year-round consumption of rice. With the increase in storage time, the taste quality and commercial value of rice gradually decrease. The accurate determination of the freshness of rice is critical to the rice trade. However, it is difficult to distinguish aging rice from fresh rice, so a quick and simple method is needed to identify the freshness of the rice. In this study, a combination of near-infrared spectroscopy (NIR) and various algorithms, such as partial least squares discriminant analysis (PLS-DA), support vector machines (SVM), and classification and regression trees (CART), were used to differentiate the freshness of rice. PLS-DA and SVM demonstrated excellent classification ability in identifying the freshness of rice, with sensitivity and specificity of 1. The original spectra were used with 100% accuracy in the test set to determine the freshness of the rice. As a result, PLS-DA and SVM can be used to determine the freshness of the rice.

Differences in grain protein content and regional distribution of 706 rice accessions.

BACKGROUND: Improving rice quality is one of the main goals of global rice breeding programs, and rice protein content is one of the most important factors affecting rice eating quality. The protein content of rice is mainly determined by genetic factors and also affected by environmental factors. However, the differences and regional distribution of protein content during the evolution of different rice varieties are still unclear. RESULTS: The purpose of this study was to understand the differences in grain protein content of 706 rice accessions in different regions and different rice subtypes. The influencing factors of grain protein content differences were analyzed from the perspectives of genetic characteristics, environment, rice subtypes, and breeding process. The results showed that the grain protein content of indica rice in most countries and regions was higher than that of japonica rice. From the perspective of the rice breeding process, the protein content of modern varieties in japonica was lower than that of landrace varieties. In most countries, modern varieties of indica rice had higher protein content than landrace varieties did. CONCLUSION: The environment and genetic characteristics caused the change in the protein content of rice. This study has improved our understanding of the differences in protein content of rice from different rice varieties. © 2022 Society of Chemical Industry.

Differences in starch multi-layer structure, pasting, and rice eating quality between fresh rice and 7 years stored rice.

With the continuous improvement of rice production capacity and the accumulation of reserves year by year, rice sometimes has to be stored for a long time. However, long-term storage of rice has poor sensory properties, which may be related to the structural changes of starch. Different from the previous studies on short-term storage of rice (often 3-12 months), the focus of this study was to understand the differences in starch multi-layer structure, pasting, and rice eating quality between 7 years stored rice and fresh rice. Our research indicated that 7 years stored rice showed higher hardness and lower stickiness compared to fresh rice, which ultimately led to poorer eating quality. These bad changes were related to differences in starch multi-layer structure. The 7 years stored rice had lower amylose content, a lower thickness of crystalline lamellae and short-range ordered structure of starch, and more large starch granules. In particular, the volume mean diameter of 7 years starch was more than 4 times that of fresh starch. 7 years stored rice had more large granular starch and unstable crystal structure, which led to the increase of pasting temperature and the decrease of gelatinization enthalpy during starch gelatinization, and ultimately reduced the eating quality of the rice.

Response of Source-Sink Characteristics and Rice Quality to High Natural Field Temperature During Reproductive Stage in Irrigated Rice System.

Global warming greatly affects the development of rice at different growth stages, thereby deteriorating rice quality. However, the effect of high natural field temperature during reproductive stages on rice quality is unclear. Thus, grain filling dynamics, source-sink characteristics and quality-related traits were compared between two contrasting natural field temperature conditions namely normal (low temperature) (LRT) and hot (high temperature) growth season (HRT) during reproductive stage. Compared with LRT, HRT significantly increased chalky grain rate (about 1.6-3.1%), chalkiness level (about 4.7-22.4%), protein content (about 0.93-1.07%), pasting temperature, setback, and consistence, and decreased total starch content (about 4.6-6.2%). Moreover, HRT significantly reduced the leaf area index (LAI, about 0.54-1.11 m2 m-2), specific leaf weight (SLW, about 1.27-1.44 mg cm-2) and source-sink ratio (leaf-sink ratio and/or stem-sink ratio), shortened the active grain filling period by 3.1-3.2 days, and reduced the rations of dry matter translocation to grain (RDMs). In conclusion, we suggested that significant reduction in assimilate translocation after flowering, resulting in the reduced active grain-filling duration and the poor rice quality (high chalkiness and the poor eating and cooking quality), modulated by source-sink characteristics in response to high natural field temperature during reproductive stage. These results enriched the study of high temperature-stressed rice and served as an important reference for selecting high-quality, heat-tolerant varieties and protecting rice quality under high-temperature conditions.

Effect of microbial community structures and metabolite profile on greenhouse gas emissions in rice varieties.

Rice paddy fields are major sources of atmospheric methane (CH4) and nitrous oxide (N2O). Rice variety is an important factor affecting CH4 and N2O emissions. However, the interactive effects of rice metabolites and microorganisms on CH4 and N2O emissions in paddy fields are not clearly understood. In this study, a high greenhouse gas-emitting cultivar (YL 6) and a low greenhouse gas-emitting cultivar (YY 1540) were used as experimental materials. Metabolomics was used to examine the roots, root exudates, and bulk soil metabolites. High-throughput sequencing was used to determine the microbial community composition. YY 1540 had more secondary metabolites (flavonoids and isoflavonoids) in root exudates than YL 6. It was enriched with the uncultured members of the families Gemmatimonadanceae and Rhizobiales_Incertae_Sedis in bulk soil, and genera Burkholderia-Caballeronia-Paraburkholderia, Magnetospirillum, Aeromonas, and Anaeromyxobacter in roots, contributing to increased expression of pmoA and nosZ genes and reducing CH4 and N2O emissions. YL 6 roots and root exudates contained higher contents of carbohydrates [e.g., 6-O- acetylarbutin and 2-(3- hydroxyphenyl) ethanol 1'-glucoside] than those of YY 1540. They were enriched with genera RBG-16-58-14 in bulk soil and Exiguobacterium, and uncultured member of the Kineosporiaceae family in roots, which contributed to increased expression of mcrA, ammonia-oxidizing archaea, ammonia-oxidizing bacteria, nirS, and nirK genes and greenhouse gas emissions. In general, these results established a link between metabolites, microorganisms, microbial functional genes, and greenhouse gas emissions. The metabolites of root exudates and roots regulated CH4 and N2O emissions by influencing the microbial community composition in bulk soil and roots.

Grain starch, fatty acids, and amino acids determine the pasting properties in dry cultivation plus rice cultivars.

A field experiment was conducted to explore the effects of cultivars under flooding irrigation and dry cultivation (D) on starch, fatty acids, and amino acids metabolism, starch physicochemical traits, and pasting properties of rice flour. In this study, high-quality cultivar (HH) had better pasting properties among all other cultivars in D treatment. DHH supported higher short-branch chain amylopectin to develop the crystalline regions. Besides, DHH increased C16:0, C16:1, C18:1, C18:2, glutamate, aspartate, lysine, and threonine, and reduced glutelin and prolamine levels in head rice. Higher pasting properties in DHH was also supported by higher CO in esters and ketones, CO in carboxylic acid, esters, alcohols, and ethers, OH in alcohols before pasting and lower CO and CO in carboxylic acid, CO in aldehydes, and CO, CO and OH in carboxylic acid after pasting. Overall, these findings improve pasting properties to maintain a higher cooking quality in dry cultivation.

Dry cultivation with ratoon system impacts rice quality using rice flour physicochemical traits, fatty and amino acids contents.

A field experiment was conducted to explore the impact on rice quality using high-quality (HH) or drought-resistant (HY) cultivars under flooding irrigation (F) or dry cultivation (D) in ratooning rice system by evaluating the metabolism or physicochemical traits of starch, fatty acids, and amino acids affecting grain quality. Compared to FHY and DHY in the main or ratoon season, DHH in ratoon season (DHHR) exhibited a higher appearance and processing quality but lower cooking quality. DHHR mainly synthesized long branch chain amylopectin to construct the crystalline regions with increased crystallinity, crystallites size, interplanar spacing, dislocation density, Asp and Thr in brown and head rice. Also, it accumulated more of C16:0, C18:0, C18:1, C18:2, and C18:3 but reduced glutelin in head rice. An increase in functional groups and diversity was seen in brown and head rice, respectively. Overall, these traits improved the processing, appearance, and pasting quality of DHHR.

Comprehensive Evaluation of 17 Qualities of 84 Types of Rice Based on Principal Component Analysis.

Rice quality is a complex indicator, and people are paying more and more attention to the quality of rice. Therefore, we used seven rice varieties for twelve nitrogen fertilizer treatments and obtained eighty-four rice types with seventeen qualities. It was found that 17 quality traits had different coefficients of variation. Among them, the coefficient of variation of chalkiness and protein content was the largest, 44.60% and 17.89% respectively. The cluster analysis method was used to define four categories of different rice qualities. The principal component analysis method was used to comprehensively evaluate 17 qualities of 84 rice. It was found that rice quality was better under low nitrogen conditions, Huanghuazhan and Lvyinzhan were easier to obtain better comprehensive rice quality during cultivation. Future rice research should focus on reducing protein content and increasing peak viscosity.

Dry cultivation and cultivar affect starch synthesis and traits to define rice grain quality in various panicle parts.

A pot experiment was conducted to explore the effects of high-quality (Huanghuazhan, HH), drought-resistant (IR, IRAT109) and drought-susceptible cultivars (ZS, Zhenshan97) under flooding irrigation and dry cultivation (D) on the starch accumulation and synthesis, physicochemical traits of starch granules and rice grain quality at the upper (U) and lower panicle. Under D treatment, IR and ZS had lower rice quality, especially the appearance and cooking quality. DHH-U had the highest appearance, nutritional and cooking quality among all cultivars under D treatment, which could be ascribed to the synthesis of more short-branch chain amylopectin and correspondingly higher starch granule tightness. DHH-U also maintained ordered carbohydrate structure, crystalline regions, and many hydrophilic and hydrophobic functional groups in starch granules before pasting. It could prevent the polymerization of small molecules to avoid the formation of macromolecules after pasting. Overall, these findings may facilitate the improvement of grain quality in rice dry cultivation.

Use of Protein Content, Amylose Content, and RVA Parameters to Evaluate the Taste Quality of Rice.

Taste quality of rice is the key to its value. However, it is greatly affected by rice types and the environment. It is a complex but necessary factor to accurately evaluate the taste quality of various types of rice in different environments. In this study, 7 different types of rice with different taste values were used as materials, and 12 nitrogen fertilizer treatments were applied to obtain 84 different rice taste values. We used protein content, amylose content, and RVA to evaluate changes in the taste value of rice. Rice with high taste value tended to have higher amylose content, peak viscosity, hold viscosity, final viscosity, and breakdown, as well as lower protein content, pasting temperature, and peak time. Protein and amylose contents affected the taste value of rice by affecting the RVA profiles except for setback. For high and low taste-value rice types, protein content could explain 66.8 and 42.9% of the variation in taste value, respectively. In the case of medium taste-value type, protein content was not enough to evaluate the taste quality of rice. Stickiness could explain 59.6% of the variation in taste value. When the protein content of rice was less than 6.61% or greater than 9.34%, it could be used to reflect the taste quality of rice. When the protein content was in between the two, protein content was not enough to reflect the taste quality of rice. Our results suggested that protein content could better reflect the taste quality change for rice, which provided a theoretical and technical basis for the accurate evaluation of the taste value of various types of rice.

Evaluation of resource and energy utilization, environmental and economic benefits of rice water-saving irrigation technologies in a rice-wheat rotation system.

Currently, numerous challenges such as excessive irrigation water consumption, labor shortage, lower economic and environmental benefits pose serious threats to rice cultivation systems. Therefore, more water- and labor-efficient irrigation technologies are needed in rice production for minimal environmental hazards and greater economic benefits. After the screening experiment of water-saving cultivation technologies and cultivars, a two-year field experiment was conducted to further explore the effects of efficient water-saving technologies and rice cultivars on the comprehensive benefits, global warming potential (GWP), grain yield, economic benefits, water productivity, nitrogen partial factor productivity, radiation, accumulated temperature and energy use efficiency (EUE) of a rice-wheat rotation system. Conventional flooding irrigation (F), intermittent irrigation (IR), transplanting rainfed (TR) and rice dry cultivation (D) were implemented with two rice cultivars, including Hanyou73 (HY) and Huanghuazhan (HH). After rice harvest, a winter wheat cultivar (Huamai 2566) was planted with traditional methods. The system of rice dry cultivation and wheat rotation had higher comprehensive benefits, which were attributed to greater water productivity, economic benefits and EUE and lower GWP, especially in the rice growing season. D treatment enhanced the comprehensive and economic benefits by 2.5% and 26.8%, 1.6% and 11.3%, 3.3% and 0.6%, and reduced the GWP by 3.4%, 56.7% and 30.2% compared with F, IR and TR treatments in the rotation system, respectively. During the rice season, D treatment significantly (P < 0.05) increased the economic benefits, water productivity and EUE, but slight decreased the grain yield than other treatments. Overall, rice dry cultivation (especially with the HY cultivar) can achieve higher comprehensive benefits in rice growing season as well as in the whole rotation system.

Effects of straw returning levels on carbon footprint and net ecosystem economic benefits from rice-wheat rotation in central China.

Straw returning usually gives rise to greenhouse gas (GHG) emissions from the soil, and thus negatively affects carbon footprint (CF) of crop production. Numerous studies reported the effects of straw returning on the CF from single crop production. However, little is known about the integrated effects of different levels of straw returning on the CF and net ecosystem economic benefits (NEEB) from rice-wheat rotation. Here, we investigated the effects of different amounts of straw returning on soil CH4 and N2O emissions, GHG emissions from agricultural inputs (AIGHG), CF, and NEEB from a 2-year cycle of rice-wheat rotation. The CF was determined based on the total GHG emissions associated with crop production inputs and services. Overall, straw returning significantly increased annual CH4 emissions by 5.4-72.2% and reduced annual N2O emissions by 3.3-31.4% compared with straw removal. Straw returning remarkably increased rice grain yields by 8.1-9.9% and wheat grain yields by 10.2-21.1% compared with straw removal. The average annual AIGHG from rice-wheat rotation ranged from 3579 to 4987 kg CO2-eq ha-1. Diesel consumption played a dominant role in the AIGHG. The annual CF ranged from 0.96 to 1.31 kg CO2-eq kg-1 and increased with increasing straw returning amounts. The NEEB, which ranged from 14161 to 17413 CNY ha-1, was significantly affected by the levels of straw returning. The treatment with returning of 1/3 of preceding crop straw to the field (2.19-2.47 kg ha-1 year-1 of rice straw in the wheat season and 1.38-1.68 kg ha-1 year-1 of wheat straw in the rice season) resulted in relatively higher grain yield, the lowest CF, and the highest NEEB among all treatments, and thus can reduce CF, and increase grain yields and NEEB, and thus can be recommended as a sustainable approach to mitigate GHG emissions and increase economic benefits from rice-wheat rotation.

Metabolomic analysis reveals metabolites and pathways involved in grain quality traits of high-quality rice cultivars under a dry cultivation system.

Dry cultivation of high-yielding or drought-resistant rice cultivars relieves the current pressure on rice cultivation systems. However, the metabolites and metabolic pathways that affect rice quality in high-yield or drought-resistant rice cultivars under dry cultivation have not yet been explored. A field experiment was conducted in 2017 to explore the effects of flooding irrigation (F) and dry cultivation (D) of high-yield and -quality cultivars (Huanghuazhan, HH; Yueyou9113, YY) and a drought-resistant cultivar (Hanyou73, HY) on rice quality traits using metabolomic analysis. Treatment DHH maintained higher head rice yield, amylose content, protein content, and breakdown values and a lower whiteness index and setback value than other cultivars under dry cultivation. These rice quality traits were related to 16 metabolites and 8 metabolic pathways. DHH showed decreases in stress response metabolites (m72, m98, m127, m165, m167, m213, m297, and m298) but maintained stress resistance (m29, m30, m39, m48, and m58) and sucrose (m150) accumulation in grains to support head rice yields and a low whiteness index. Raising the lactose, choline, and nicotinoylcholine levels in rice grains improved their protein content and cooking quality. DHH also adjusted the glycine, serine and threonine metabolism, galactose metabolism, and starch and sucrose metabolism of rice. This affected the biosynthesis of anthocyanin, phenylpropanoid, and flavonoid, supporting protein biosynthesis and starch accumulation in the endosperm. These findings provide further possibilities for improving rice quality traits of high-yield and -quality rice cultivars under dry cultivation.

Control Effects of Chelonus munakatae Against Chilo suppressalis and Impact on Greenhouse Gas Emissions From Paddy Fields.

Field and pot experiments were conducted to investigate the control effects of parasitoid wasps (Chelonus munakatae Munakata) on striped rice stem borers and their impacts on N2O and CH4 emissions from paddy fields. Three treatments including no insect (NI), striped stem borer (CS) and parasitoid wasp + striped stem borer (CS+CM) were implemented. The abundance of GHG-related microorganisms in soils was determined by absolute real-time qPCR. Compared with NI, CS and CS+CM significantly increased the ratio of dead tillers, inhibited the growth and vitality of rice roots, and decreased the rice grain yield, while they significantly reduced the seasonal cumulative emissions of N2O and CH4 by 17.7-24.6 and 13.6-35.1%, and decreased the total seasonal global warming potential (GWP) by 13.6-34.7%, respectively. Moreover, compared with CS, CS+CM significantly enhanced the growth and vitality of rice roots, decreased the ratio of dead tillers, improved the rice grain yield, as well as increased the seasonal cumulative CH4 emissions and the total seasonal GWP. Principal component analysis indicated that the morphological features of rice roots play a more important role in regulating GHG emissions than GHG-related microorganisms. The results suggested that C. munakatae can effectively control the outbreak of C. suppressalis and alleviate crop damage with acceptably higher GHG emissions. It is concluded that it can be recommended as an effective, environment-friendly and sustainable approach to prevent and control C. suppressalis.