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1.
Genet Mol Res ; 15(3)2016 Jul 15.
Article in English | MEDLINE | ID: mdl-27525850

ABSTRACT

The high-affinity K(+) transporter (HKT) family comprises a group of multifunctional cation transporters widely distributed in organisms ranging from Bacteria to Eukarya. In angiosperms, the HKT family consists primarily of nine types, whose evolutionary relationships are not fully understood. The available sequences from 31 plant species were used to perform a comprehensive evolutionary analysis, including an examination of selection pressure and estimating phylogenetic tree and gene duplication events. Our results show that a gene duplication in the HKT1;5/HKT1;4 cluster might have led to the divergence of the HKT1;5 and HKT1;4 subfamilies. Additionally, maximum likelihood analysis revealed that the HKT family has undergone a strong purifying selection. An analysis of the amino acids provided strong statistical evidence for a functional divergence between subfamilies 1 and 2. Our study was the first to provide evidence of this functional divergence between these two subfamilies. Analysis of co-evolution in HKT identified 25 co-evolved groups. These findings expanded our understanding of the evolutionary mechanisms driving functional diversification of HKT proteins.


Subject(s)
Evolution, Molecular , Ion Pumps/genetics , Magnoliopsida/genetics , Plant Proteins/genetics , Potassium/metabolism , Gene Duplication , Ion Pumps/metabolism , Magnoliopsida/classification , Phylogeny , Plant Proteins/metabolism , Selection, Genetic
2.
Genet Mol Res ; 15(2)2016 May 23.
Article in English | MEDLINE | ID: mdl-27323087

ABSTRACT

Verticillium wilt caused by soil borne fungus Verticillium dahliae could significantly reduce cotton yield. The Ve1 homologous gene Gbvdr3 is resistant to Verticillium wilt. In order to understand of the function of the promoter Gbvdr3 in Gossypium barbadense, the promoter region of the receptor-like gene Gbvdr3 was obtained by genome walking, and the cis-element in the promoter was identified using the PLACE software in this study. The sequence analysis showed that the promoter contained elements related to stress resistance and light regulation. The cloned promoter was fused to the GUS reporter gene and transformed into Arabidopsis. GUS expression was specifically detected in roots, flowers, and seeds, suggesting that the expression of Gbvdr3 is tissue-specific. Separation and characterization analysis of the promoter of Gbvdr3 provides a platform for further research and application of this gene. Thorough understanding of the function of the Gbvdr3 promoter is important for better understanding of Gbvdr3 function. These results indicated that the promoter of Gbvdr3 was a tissue-specific promoter.


Subject(s)
Disease Resistance/genetics , Gossypium/genetics , Plant Diseases/genetics , Plant Proteins/genetics , Arabidopsis/genetics , Arabidopsis/growth & development , Cloning, Molecular , Gene Expression Regulation, Plant , Genome, Plant , Gossypium/growth & development , Gossypium/virology , Plant Diseases/virology , Plant Proteins/biosynthesis , Plant Roots , Plants, Genetically Modified/genetics , Promoter Regions, Genetic/genetics , Soil Microbiology , Textiles , Verticillium/genetics , Verticillium/pathogenicity
3.
Genet Mol Res ; 13(4): 10607-14, 2014 Dec 18.
Article in English | MEDLINE | ID: mdl-25526181

ABSTRACT

The aim of this study was to investigate the expression and significance of the imprinted gene PEG10 (paternally expressed gene 10) in preeclampsia placental tissue. Quantitative real-time reverse transcriptase polymerase chain reaction and immunohistochemistry to evaluate mRNA and protein expression and distribution of PEG10 in placental tissues obtained from 22 preeclampsia patients (8 patients with mild preeclampsia, 14 cases of severe preeclampsia). At the same time, 22 cases of normal pregnant women served as controls. PEG10 expression was determined in the placental tissue of the two different groups. In the normal pregnancy group, the average expression level of PEG10 was 0.5832 ± 0.045, while in the preeclampsia group, this level was 0.1943 ± 0.035. Statistical analysis showed that the two groups differed significantly (P < 0.05). The downregulated expression of the imprinted gene PEG10 may be an important reason for the occurrence of preeclampsia.


Subject(s)
Genomic Imprinting , Placenta/metabolism , Pre-Eclampsia/genetics , Proteins/genetics , RNA, Messenger/metabolism , Adult , Apoptosis Regulatory Proteins , DNA-Binding Proteins , Female , Humans , Pre-Eclampsia/pathology , Pregnancy , Proteins/metabolism , RNA-Binding Proteins , Young Adult
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