Afro-alpine flagships revisited: Parallel adaptation, intermountain admixture and shallow genetic structuring in the giant senecios (Dendrosenecio).

Distantly related lineages of the enigmatic giant rosette plants of tropical alpine environments provide classical examples of convergent adaptation. For the giant senecios (Dendrosenecio), the endemic landmarks of the East African sky islands, it has also been suggested that parallel adaptation has been important for within-lineage differentiation. To test this hypothesis and to address potential gene flow and hybridization among the isolated sky islands, we organized field expeditions to all major mountains. We sampled all currently accepted species and all but one subspecies and genotyped 460 plants representing 109 populations. We tested whether genetic structuring corresponds to geography, as predicted by a parallel adaptation hypothesis, or to altitudinal belt and habitat rather than mountains, as predicted by a hypothesis of a single origin of adaptations. Bayesian and Neighbor-Net analyses showed that the main genetic structure is shallow and largely corresponds to geography, supporting a hypothesis of recent, rapid radiation via parallel altitude/habitat adaptation on different mountains. We also found evidence for intermountain admixture, suggesting several long-distance dispersals by wind across vast areas of unsuitable habitat. The combination of parallel adaptation, secondary contact, and hybridization may explain the complex patterns of morphological variation and the contradicting taxonomic treatments of these rare enigmatic giants, supporting the use of wide taxonomic concepts. Notably, the within-population genetic diversity was very low and calls for increased conservation efforts.

Physicochemical composition of Tamarindus indica L. (Tamarind) in the agro-ecological zones of Uganda.

The relationships between the physicochemical composition of Tamarindus indica pulp and seeds, and agro-ecological zones and land use types were assessed in Uganda. The objective was to determine the relationship between the physicochemical composition, agro-ecological zones, and land use types. The samples were processed by manually depulping the T. indica pods, sun-drying the pulp and seeds, and grinding into powder. The powdered samples were analyzed for ß-carotenoids, vitamin C (ascorbic acid), calorific value, crude oil, acid, and peroxide values. Data were analyzed using ANOVA in the general linear model (GLM). Principal component analysis (PCA) was used to relate the physicochemical properties to the agro-ecological zones and land use types. There were significant differences (p ≤ .05) in the physicochemical composition variables between agro-ecological zones and land use types. Land use types showed strong correlations with physicochemical properties while agro-ecological zones did not show correlations. The results show that in terms of general properties, T. indica pods provide a valuable, rich, and exceptional source of vitamin C, compared to many widely consumed indigenous and conventional fruits and vegetables. The pods from land use types characterized by natural habitats had relatively more nutrient levels than the land use types influenced by anthropogenic activities.

Mineral composition of Tamarindus indica LINN (tamarind) pulp and seeds from different agro-ecological zones of Uganda.

Mineral composition of dry Tamarindus indica LINN pulp and seeds was evaluated on samples collected from three different agro-ecological zones of Uganda (Lake Victoria Crescent, and Eastern and West Nile). The objective of the study was to evaluate the mineral composition of T. indica pulp and seed samples from across Uganda's different agro-ecological zones and land use types. Separately grounded samples of T. indica pulp and seeds were analyzed for Zn, Fe, Mg, P, Na, K, and Ca. The univariate analysis of variance in the General Linear Model was used to compare differences in mineral composition. Treatment means were separated using Least Significant Difference (LSD) in Post Hoc Tests. The results showed that there were significant differences (p ≤ 0.005) in mineral composition levels of T. indica pulp and seed samples between the different agro-ecological zones with the exception of P and Na (for pulp). The T. indica pulp and seeds samples from the Lake Victoria Crescent zone and wild land use type had generally higher mineral levels than T. indica samples from other agro-ecological zones and different land use types. As mineral composition levels were generally higher in the seed than the pulp samples, consumption of T. indica seeds should be promoted. There is also need to conserve individual species both on-farm and in the wild population, but T. indica mineral concentrations (both pulp and seeds) were higher in the samples from the wild population, making them good for human and animal diets.

Sweet vernal grasses (Anthoxanthum) colonized African mountains along two fronts in the Late Pliocene, followed by secondary contact, polyploidization and local extinction in the Pleistocene.

High tropical mountains harbour remarkable and fragmented biodiversity thought to a large degree to have been shaped by multiple dispersals of cold-adapted lineages from remote areas. Few dated phylogenetic/phylogeographic analyses are however available. Here, we address the hypotheses that the sub-Saharan African sweet vernal grasses have a dual colonization history and that lineages of independent origins have established secondary contact. We carried out rangewide sampling across the eastern African high mountains, inferred dated phylogenies from nuclear ribosomal and plastid DNA using Bayesian methods, and performed flow cytometry and AFLP (amplified fragment length polymorphism) analyses. We inferred a single Late Pliocene western Eurasian origin of the eastern African taxa, whose high-ploid populations in one mountain group formed a distinct phylogeographic group and carried plastids that diverged from those of the currently allopatric southern African lineage in the Mid- to Late Pleistocene. We show that Anthoxanthum has an intriguing history in sub-Saharan Africa, including Late Pliocene colonization from southeast and north, followed by secondary contact, hybridization, allopolyploidization and local extinction during one of the last glacial cycles. Our results add to a growing body of evidence showing that isolated tropical high mountain habitats have a dynamic recent history involving niche conservatism and recruitment from remote sources, repeated dispersals, diversification, hybridization and local extinction.

Detection of Self Incompatibility Genotypes in Prunus africana: Characterization, Evolution and Spatial Analysis.

In flowering plants, self-incompatibility is an effective genetic mechanism that prevents self-fertilization. Most Prunus tree species exhibit a homomorphic gametophytic self-incompatibility (GSI) system, in which the pollen phenotype is encoded by its own haploid genome. To date, no identification of S-alleles had been done in Prunus africana, the only member of the genus in Africa. To identify S-RNase alleles and hence determine S-genotypes in African cherry (Prunus africana) from Mabira Forest Reserve, Uganda, primers flanking the first and second intron were designed and these amplified two bands in most individuals. PCR bands on agarose indicated 26 and 8 different S-alleles for second and first intron respectively. Partial or full sequences were obtained for all these fragments. Comparison with published S-RNase data indicated that the amplified products were S-RNase alleles with very high interspecies homology despite the high intraspecific variation. Against expectations for a locus under balancing selection, frequency and spatial distribution of the alleles in a study plot was not random. Implications of the results to breeding efforts in the species are discussed, and mating experiments are strongly suggested to finally prove the functionality of SI in P. africana.

Enhanced growth of multipurpose Calliandra (Calliandra calothyrsus) using arbuscular mycorrhiza fungi in Uganda.

This study was conducted to compare the effect of selected arbuscular mycorrhiza fungi genera and their application rates for enhanced Calliandra growth in Uganda. The performance of Calliandra under different types and rates of arbuscular mycorrhiza fungi inoculation was assessed in the greenhouse using sterilized Mabira soils. Four dominant genera were isolated from the rhizosphere of sorghum in the laboratory. Calliandra seeds were grown in pots and the seed coating method of application was used at concentrations of 0 spores, 30 spores and 50 spores. Each treatment was replicated three times. All Calliandra inoculated seedlings showed improved seedling growth (in terms of height and shoot dry matter weight) compared to the control (P < 0.05) except with the arbuscular mycorrhiza fungi mixture treated Calliandra at 50 spores rate. Glomus sp. and Acaulospora sp. had significant influence on the height of Calliandra, while AMF mixture performed best in terms of shoot dry weight (P < 0.05). This study provides a good scope for commercially utilizing the efficient strains of arbuscular mycorrhiza fungi for beneficial effects in the primary establishment of slow growing seedlings ensuring better survival and improved growth.