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1.
Biodivers Data J ; 12: e115000, 2024.
Article in English | MEDLINE | ID: mdl-38314121

ABSTRACT

Background: Soil animal communities include more than 40 higher-order taxa, representing over 23% of all described species. These animals have a wide range of feeding sources and contribute to several important soil functions and ecosystem services. Although many studies have assessed macroinvertebrate communities in Brazil, few of them have been published in journals and even fewer have made the data openly available for consultation and further use. As part of ongoing efforts to synthesise the global soil macrofauna communities and to increase the amount of openly-accessible data in GBIF and other repositories related to soil biodiversity, the present paper provides links to 29 soil macroinvertebrate datasets covering 42 soil fauna taxa, collected in various land-use systems in Brazil. A total of 83,085 georeferenced occurrences of these taxa are presented, based on quantitative estimates performed using a standardised sampling method commonly adopted worldwide to collect soil macrofauna populations, i.e. the TSBF (Tropical Soil Biology and Fertility Programme) protocol. This consists of digging soil monoliths of 25 x 25 cm area, with handsorting of the macroinvertebrates visible to the naked eye from the surface litter and from within the soil, typically in the upper 0-20 cm layer (but sometimes shallower, i.e. top 0-10 cm or deeper to 0-40 cm, depending on the site). The land-use systems included anthropogenic sites managed with agricultural systems (e.g. pastures, annual and perennial crops, agroforestry), as well as planted forests and native vegetation located mostly in the southern Brazilian State of Paraná (96 sites), with a few additional sites in the neighbouring states of São Paulo (21 sites) and Santa Catarina (five sites). Important metadata on soil properties, particularly soil chemical parameters (mainly pH, C, P, Ca, K, Mg, Al contents, exchangeable acidity, Cation Exchange Capacity, Base Saturation and, infrequently, total N), particle size distribution (mainly % sand, silt and clay) and, infrequently, soil moisture and bulk density, as well as on human management practices (land use and vegetation cover) are provided. These data will be particularly useful for those interested in estimating land-use change impacts on soil biodiversity and its implications for below-ground foodwebs, ecosystem functioning and ecosystem service delivery. New information: Quantitative estimates are provided for 42 soil animal taxa, for two biodiversity hotspots: the Brazilian Atlantic Forest and Cerrado biomes. Data are provided at the individual monolith level, representing sampling events ranging from February 2001 up to September 2016 in 122 sampling sites and over 1800 samples, for a total of 83,085 ocurrences.

2.
Sci Total Environ ; 895: 165087, 2023 Oct 15.
Article in English | MEDLINE | ID: mdl-37379924

ABSTRACT

Despite the importance of earthworms for soil formation, more is needed to know about how Pre-Columbian modifications to soils and the landscape. Gaining a deeper understanding is essential for comprehending the historical drivers of earthworm communities and the development of effective conservation strategies in the Amazon rainforest. Human disturbance can significantly impact earthworm diversity, especially in rainforest soils, and in the particular case of the Amazonian rainforest, both recent and ancient anthropic practices may be important. Amazonian Dark Earths (ADEs) are fertile soils found throughout the Amazon Basin, created by sedentary habits and intensification patterns of pre-Colombian societies primarily developed in the second part of the Holocene period. We have sampled earthworm communities in three Brazilian Amazonian (ADEs) and adjacent reference soils (REF) under old and young forests and monocultures. To better assess taxonomic richness, we used morphology and the barcode region of the COI gene to identify juveniles and cocoons and delimit Molecular Operational Taxonomic Units (MOTUs). Here we suggest using Integrated Operational Taxonomical units (IOTUs) which combine both morphological and molecular data and provide a more comprehensive assessment of diversity, while MOTUs only rely on molecular data. A total of 970 individuals were collected, resulting in 51 taxonomic units (IOTUs, MOTUs, and morphospecies combined). From this total, 24 taxonomic units were unique to REF soils, 17 to ADEs, and ten were shared between both soils. The highest richness was found in old forest sites for ADEs (12 taxonomic units) and REFs (21 taxonomic units). The beta-diversity calculations reveal a high species turnover between ADEs and REF soils, providing evidence that ADEs and REFs possess distinct soil biota. Furthermore, results suggest that ADE sites, formed by Pre-Columbian human activities, conserve a high number of native species in the landscape and maintain a high abundance, despite their long-term nature.


Subject(s)
Oligochaeta , Animals , Humans , Biodiversity , Forests , Soil , Agriculture
3.
Zootaxa ; 5255(1): 399-416, 2023 Mar 15.
Article in English | MEDLINE | ID: mdl-37045246

ABSTRACT

The southernmost state of Brazil, Rio Grande do Sul, includes both the Pampa and Atlantic Forest biomes, and covers an area of around 284 thousand km2. Since the last checklist for the state, published in 2012, many additional sites have been sampled. Hence, we provide here a full list of earthworm species and their distribution in different municipalities and land use systems in the state. Data were obtained from the literature, museums, and other earthworm collections and recent sampling efforts. Records for 19 additional species are reported here for the first time, raising the total to 78 species/subspecies currently known from Rio Grande do Sul, from the families Acanthodrilidae (5), Benhamiidae (3), Lumbricidae (13), Megascolecidae (11), Ocnerodrilidae (22), Almidae (2), Glossoscolecidae (18) and Rhinodrilidae (5). Alexidrilus Righi, 1971 is synonymized with Urobenus Benham, 1886, as both species in the genus (A. littoralis Ljungström, 1972 and A. lourdesae Righi, 1971) have similar morphology to the type species Urobenus brasiliensis Benham, 1886. Most of the native species/subspecies in the state (39), including an important number of new species, were found in native vegetation with lesser disturbance, such as swamps, native forests and pastures. On the other hand, the three peregrine and 27 exotic species (especially Pontoscolex corethrurus, Eukerria spp., lumbricids, megascolecids, Dichogaster spp., and Microscolex spp.) dominated in disturbed sites, such as compost piles, urban areas, rice and other crops, and cultivated pastures. Considering the geographic extension and the many unsampled sites in the state, further collection efforts are necessary and will certainly reveal new species, as evidenced here.


Subject(s)
Oligochaeta , Oryza , Animals , Brazil , Ecosystem , Forests
4.
Zootaxa ; 5255(1): 362-376, 2023 Mar 15.
Article in English | MEDLINE | ID: mdl-37045249

ABSTRACT

No-tillage (NT) is a soil conservation management practice that can sustain important earthworm populations due the maintenance of soil cover and absence of soil disturbance. Sites with NT can also support native earthworm species, but few studies have identified the earthworms collected under NT. Therefore, the present study evaluated earthworm diversity in 14 sites under NT and seven with riparian forest (RF) in Atlantic Forest located in Rolândia, Cambé, Toledo (Paraná), Coxilha, Sarandi (Rio Grande do Sul) and Itaí (São Paulo). The earthworms were collected by handsorting using quantitative and qualitative methods. The 1471 individuals collected were classified into 23 species belonging to five families: Glossoscolex sp.71, sp.72, sp.73 and sp.74, Fimoscolex sp.23 sp.24 and sp.25 (Glossoscolecidae); Pontoscolex corethrurus, Urobenus brasiliensis (Rhinodrilidae); Haplodrilus sp.1 and sp.2, Ocnerodrilidae sp.1, sp.15, sp.16, sp.48, sp.49 and sp.50 (Ocnerodrilidae); Amynthas gracilis, Metaphire californica (Megascolecidae); Dichogaster affinis, D. gracilis, D. bolaui and D. saliens (Benhamiidae). Of the total, 15 were native and eight were exotic species. In general NT sites had higher species richness than the forest sites (except at Itaí), mainly due to the invasion of NT fields by exotic species, particularly Ocnerodrilidae sp.1 and Dichogaster spp. Six of the seven forests had native species, but only four NT fields had native earthworms, and these were generally found in low abundance.


Subject(s)
Oligochaeta , Animals , Brazil , Forests , Agriculture , Soil
5.
Zootaxa ; 5255(1): 283-303, 2023 Mar 15.
Article in English | MEDLINE | ID: mdl-37045254

ABSTRACT

The state of Goiás and the Federal District together cover an area of about 346 thousand km2, including the diversified Cerrado vegetation, also known as the Brazilian Savanna, a biodiversity hotspot with many endangered and endemic species. Much of the Cerrado has been converted to agriculture, but little is known of its earthworms, and the impacts of land use management and agricultural practices on their density and diversity. In the present paper we review the known earthworm species in Goiás and the Federal District based on historical and museum records, and update information on their distribution and populations in different counties and land use systems with data from recent samplings. Five additional species are reported here for the first time, raising the total to 12 species currently known from Goiás, from the families Benhamiidae (1), Glossoscolecidae (1), Megascolecidae (3), Ocnerodrilidae (2) and Rhinodrilidae (5). In the Federal District, an additional 10 species are reported, bringing the total to 23 earthworm species, belonging to the families Benhamiidae (4), Eudrilidae (1), Glossoscolecidae (2), Ocnerodrilidae (1), Lumbricidae (2), Megascolecidae (1) and Rhinodrilidae (12). Native species in Goiás (6) were found in areas with lesser disturbance, such as in native forest and flooded areas/river banks, a phenomenon also observed in the Federal District. On the other hand, the exotic and peregrine species found in Goiás (6) and in the Federal District (9) dominated in disturbed sites, such as perennial crops, agroforestry, annual crops, urban areas, secondary forests, pastures and agropastoral systems, among others. Given the many new species found and the extension of Goiás and the Federal District, further effort is needed to adequately characterize the earthworm fauna of the region, from where many other species are expected.


Subject(s)
Oligochaeta , Animals , Agriculture , Biodiversity , Brazil , Forests
6.
Sci Rep ; 13(1): 5643, 2023 04 06.
Article in English | MEDLINE | ID: mdl-37024527

ABSTRACT

Synchrotron X-ray computed tomography (XCT) has been increasingly applied to study the in vivo dynamics of root growth and rhizosphere processes. However, minimizing radiation-induced damage to root growth warrants further investigation. Our objective was to develop a robust approach for modeling and evaluating ways to reduce synchrotron X-ray dose effects on root growth during in vivo imaging. Wheat roots growing in soil were exposed to X-rays during XCT experiments resolved in space (3D) plus time (4D). The dose rate and cumulative absorbed dose in roots were modelled using the Monte Carlo code FLUKA for different experimental conditions of polychromatic and quasi-monochromatic X-ray beam configurations. The most impactful factors affecting damage to roots were incident X-ray energy spectrum, stored current in the accelerator machine, position of the root in the soil, and possibly the number of exposures during the 4D XCT experiments. Our results imply that radiation dose during in vivo imaging of plant roots can be diminished by using monochromatic radiation at the highest energy suitable for a given sample thickness and field of view, and by controlling the rotation axis of off-centered roots to increase attenuation of radiation by the soil matrix.


Subject(s)
Soil , Synchrotrons , X-Rays , Monte Carlo Method , Radiography , Phantoms, Imaging
7.
Molecules ; 27(16)2022 Aug 13.
Article in English | MEDLINE | ID: mdl-36014413

ABSTRACT

The use of plant-based products has been shown to efficiently inhibit fungi-mediated diseases in agricultural crops. Here, we extracted and evaluated the composition of noni, Morinda citrifolia L., essential oil and assessed its activities against Stagonosporopsis cucurbitacearum in Cucumis melo L. Using in silico molecular approaches, potential interactions between the essential oil major components and S. cucurbitacearum tyrosine-tRNA ligase were predicted. Finally, we also measured the potential interference of plant physiology (the stomatal conductance and net photosynthesis) mediated by the application of the M. citrifolia essential oil. Chromatographic analysis revealed that octanoic acid (75.8%), hexanoic acid (12.8%), and isobutyl pent-4-enyl carbonate (3.1%) were the major essential oil compounds. Octanoic acid and noni essential oil, when used as preventive measures, reduce fungal mycelial growth at a concentration of 5 mg/mL without causing significant damage to the treated leaves, which reinforces their efficacies as preventive tools against S. cucurbitacearum. Molecular docking analyses predicted very stable interactions between the major essential oil constituents and S. cucurbitacearum tyrosine-tRNA ligase, suggesting the interference of these plant-based molecules upon enzyme activation. Octanoic acid and M. citrifolia essential oil at concentrations of 20 mg/mL decreased the stomatal conductance and net photosynthesis rate of melon plants, resulting in robust phytotoxicity. Collectively, our findings indicated that despite the phytotoxicity risks at higher concentrations, M. citrifolia essential oil and octanoic acid, have potential as alternative tools for the integrative management of S. cucurbitacearum.


Subject(s)
Morinda , Oils, Volatile , Tyrosine-tRNA Ligase , Ascomycota , Caprylates , Molecular Docking Simulation , Morinda/chemistry , Oils, Volatile/pharmacology , Plant Extracts/chemistry
8.
Plant Dis ; 2022 Mar 09.
Article in English | MEDLINE | ID: mdl-35263155

ABSTRACT

Cassava (Manihot esculenta) is one of the main food sources of energy in developing countries owing to its starch-rich roots (Pinweha et al., 2015). Anthracnose is considered the most destructive disease of the aerial part of this crop (Bragança et al., 2016; Liu et al., 2019), and it is caused by species such as Colletotrichum plurivorum, C. karstii, C. fructicola, C. siamense (Liu et al., 2019), and C. theobromicola (Oliveira et al, 2016). In 2019, leaves with irregular necrotic spots, typical symptoms of anthracnose, were collected in Pará, Brazil. Commercial sampled fields showed 20% of incidence of anthracnose. Colletotrichum strains were isolated and cultured on potato dextrose agar at 25 ºC with a 12-h light photoperiod from surface-disinfected (70% alcohol and 1% sodium hypochlorite) lesion transition area. Five of the obtained isolates exhibited brown colonies on the upper and lower surfaces. Conidia were hyaline, cylindrical and aseptate, 12.82-15.23 µm × 3.52-5.25 µm in size. These phenotypic characters were similar to those belonging to C. orchidearum sensu lato (Damm et al. 2019). Glyceraldehyde 3-phosphate dehydrogenase (GAPDH), ß-tubulin (TUB2), chitin synthase 1(CHS-1), and histone HIS3 partial gene were amplified and sequenced for one representative isolate (UFT/Coll89). Sequences were deposited in GenBank [Accession numbers: MT396235 (GAPDH), MT800856 (TUB2), MT800870 (CHS-1), and MT856672 (HIS3)]. BLASTn searches of CHS-1 and HIS3 sequences showed 100% identity to C. musicola. Maximum Likelihood Phylogenetic analysis, including previously published sequences of closely related species, placed the isolate from Cassava in the C. musicola clade with 100% support, and confidently it assigned to this species. Pathogenicity was proven with inoculations by spraying a conidial suspension (106 conida mL-1) on 3-month-old cassava plants (three unwounded leaves per plant). The plants were placed in a humid chamber at 25 °C for 48h, and a 12-h photoperiod. The negative control was represented by plants inoculated with sterile distilled water. The experiment was repeated twice. The same symptoms observed in the field were reproduced only in inoculated leaves, from which the pathogen was reisolated lesions fulfilling Koch's postulates. No symptoms were observed on the negative control. To our knowledge, this is the first report of C. musicola joining a group of new and emergent species of Colletotrichum causing anthracnose in cassava producing regions around the world. The identification of this species causing cassava anthracnose is crucial to improve the disease control strategies and resistance breeding programs.

9.
Glob Chang Biol ; 27(19): 4575-4591, 2021 10.
Article in English | MEDLINE | ID: mdl-34118093

ABSTRACT

Amazonian rainforests, once thought to be pristine wilderness, are increasingly known to have been widely inhabited, modified, and managed prior to European arrival, by human populations with diverse cultural backgrounds. Amazonian Dark Earths (ADEs) are fertile soils found throughout the Amazon Basin, created by pre-Columbian societies with sedentary habits. Much is known about the chemistry of these soils, yet their zoology has been neglected. Hence, we characterized soil fertility, macroinvertebrate communities, and their activity at nine archeological sites in three Amazonian regions in ADEs and adjacent reference soils under native forest (young and old) and agricultural systems. We found 673 morphospecies and, despite similar richness in ADEs (385 spp.) and reference soils (399 spp.), we identified a tenacious pre-Columbian footprint, with 49% of morphospecies found exclusively in ADEs. Termite and total macroinvertebrate abundance were higher in reference soils, while soil fertility and macroinvertebrate activity were higher in the ADEs, and associated with larger earthworm quantities and biomass. We show that ADE habitats have a unique pool of species, but that modern land use of ADEs decreases their populations, diversity, and contributions to soil functioning. These findings support the idea that humans created and sustained high-fertility ecosystems that persist today, altering biodiversity patterns in Amazonia.


Subject(s)
Ecosystem , Soil , Agriculture , Biodiversity , Humans , Soil Microbiology
10.
Nutr Clin Pract ; 35(5): 885-893, 2020 Oct.
Article in English | MEDLINE | ID: mdl-31840323

ABSTRACT

BACKGROUND: Crohn's disease (CD) is often associated with nutrition disorders. Many nutrition therapeutic alternatives have been studied. Nevertheless, the actual role of nutrition therapy is still controversial. The objective of this study was to assess the effects of nutrition supplementation with and without transforming growth factor-beta 2 (TGF-ß2) on inflammatory, endoscopic, histopathologic, and nutrition parameters in active CD. MATERIALS AND METHODS: Thirty-eight patients were allocated into 3 groups: group 1 (patients who received only nutrition orientation), group 2 (nutrition orientation and a normoproteic, normocaloric nutrition supplement), and group 3 (nutrition orientation and the nutritional supplement with TGF-ß2). Clinical and nutrition evaluation, C-reactive protein (CRP) levels, and assessment of endoscopic and histologic parameters in the intestinal mucosa were performed before and after nutrition intervention. RESULTS: The mean follow-up period was 3 months. In the beginning of the study, groups were homogeneous regarding age, gender, CD behavior and localization, and medication in use. In the end of the study, the Clinical Disease Activity Index score was reduced in groups 2 and 3; in group 3, a reduction in CRP levels and an improvement in histologic findings were observed. Among patients who received nutritional supplement, some anthropometric patterns were improved. CONCLUSION: The results of the study indicate that nutritional supplementation improved nutrition and inflammatory patterns in patients with active CD. However, only patients receiving TGF-ß2-enriched formula showed improvement in histologic parameters and significant reduction in CRP levels.


Subject(s)
Crohn Disease/therapy , Dietary Supplements , Inflammation/blood , Nutritional Status , Transforming Growth Factor beta2/administration & dosage , Administration, Oral , Adult , Anthropometry/methods , C-Reactive Protein/analysis , Endoscopy/methods , Female , Food, Formulated , Humans , Male , Middle Aged , Nutrition Assessment , Prospective Studies , Young Adult
11.
An Acad Bras Cienc ; 91(3): e20180528, 2019.
Article in English | MEDLINE | ID: mdl-31166367

ABSTRACT

Liming can influence crop growth by altering pore geometry, pore size distribution and water retention characteristics in acid soils. The aim of this work is to determine liming effects on the soil structure based on analysis of water retention data using a cubic spline adjustment function. For that, the authors investigated the effect of three lime rates (0, 15 and 20 t ha-1) on soil water retention characteristics and pore size distribution of a silty-clay "Cambissolo Háplico Alumínico" (Dystrudept) located in the SE region of the Paraná State, Brazil. Soil cores were collected after 31 months of the experiment at 0-10 cm and 10-20 cm soil layers. Eleven matric potentials (from 0 to -7000 cm H2O) were employed to calculate soil water retention and pore size distribution curves. The pore size distribution curves revealed trimodal soil porosity with three distinct peaks. Equivalent pore diameters ranging from 9.18 µm to 13.18 µm separated structural and matrix domains. Small differences exist in the pore size distribution curves due to liming and between layers for all peaks. With no-till plus surface liming, the volume of large pores diminished at the two layers and the volume of small pores increased at the surface layer.

12.
Toxins (Basel) ; 11(4)2019 04 10.
Article in English | MEDLINE | ID: mdl-30974722

ABSTRACT

Fumonisins are mycotoxins (MTs) produced mainly by the fungus Fusarium verticillioides, the main pathogens of maize which cause ear rot. The aim of this work was to evaluate some factors that may lead to high fumonisin production by F. verticillioides in maize grains, correlating the pathogen inoculation method with different genotypes grown in four Brazilian states. Experiments were conducted in 2015-2016 in maize crops from experimental maize fields located in four distinct states of Brazil. Results showed that contamination by fumonisin mycotoxins occurred even on symptomatic or asymptomatic grains. In all municipalities, the samples showed levels of fumonisin B1 that were higher than would be tolerable for the human consumption of corn products (the current tolerance limit for fumonisin is 1.5 µg g-1). High severity of grains infected with F. verticillioides does not always show high concentrations of fumonisins. Environments with higher temperatures may influence the production of high concentrations of fumonisin in maize hybrids. Spray inoculation methods and inoculation at the center of spikes did not influence fumonisin concentrations. Results showed that the hybrids P3630H, P32R48 and P3250 presented higher disease severity, as well as higher mycotoxin levels in the studied locations with higher temperatures.


Subject(s)
Edible Grain/chemistry , Fumonisins/analysis , Fusarium/metabolism , Zea mays/chemistry , Brazil , Edible Grain/genetics , Edible Grain/microbiology , Environment , Fumonisins/metabolism , Genotype , Plant Diseases/microbiology , Temperature , Zea mays/genetics , Zea mays/microbiology
13.
Arq. Inst. Biol ; 86: e0232019, 2019. ilus
Article in English | VETINDEX, LILACS | ID: biblio-1024605

ABSTRACT

Rust, caused by the biotrophic fungus Olivea neotectonae, stands out as an important disease in teak plantations in Brazil. Considering the current importance of this rust and the need to obtain additional basic information about its causal agent to better disease management, the present study aimed to analyze the morphology of O. neotectonae using light microscopy and demonstrate the infection process in teak leaves using scanning electron microscopy techniques (SEM). The morphological characteristics observed using light microscopy were similar to those described in the literature for this species. SEM revealed that the infection structures of the pathogen penetrated the teak leaf through the stomata complex. This study provides the first microscopic evidence of the infection process of Olivea neotectonae in leaves of teak plants.(AU)


A ferrugem, causada pelo fungo biotrófico Olivea neotectonae, destaca-se como uma doença importante nas plantações de teca no Brasil. Considerando a importância atual dessa ferrugem e a necessidade de obter informações básicas adicionais sobre seu agente causal para melhor manejo da doença, o presente estudo teve como objetivo analisar a morfologia da O. neotectonae utilizando microscopia de luz e demonstrar o processo de infecção em folhas de teca por meio de técnicas de microscopia eletrônica de varredura (MEV). As características morfológicas observadas em microscopia de luz foram semelhantes às descritas na literatura para essa espécie. A MEV revelou que as estruturas de infecção do patógeno penetraram na folha de teca através do complexo estomático. Este estudo fornece a primeira evidência microscópica do processo de infecção de Olivea neotectonae em folhas de plantas de teca.(AU)


Subject(s)
Pest Control , Rainforest , Fungi , Plant Diseases , Microscopy, Electron/methods
14.
Zootaxa ; 4496(1): 503-516, 2018 Oct 04.
Article in English | MEDLINE | ID: mdl-30313719

ABSTRACT

The Campos Gerais region of Paraná are on an ancient plateau of sandstone origin and are covered with a diverse vegetation including mainly grasslands and various types of Atlantic Forest (particularly Araucaria forest). The region represents an important natural capital for biodiversity conservation as well as for agricultural and forestry production. However, little is known of the species richness and diversity of soil macroinvertebrates in this region. In the present study we evaluated earthworm species occurrence and richness in five land use systems (LUS) in the southern part of the Campos Gerais in Lapa county. Earthworms were handsorted from up to 18 soil monoliths on five occasions over three years (Feb. 2014, Feb., Mar., Nov. 2015, Jul. 2016) in the following LUS: old native forest, native grassland, young regenerating forest and grass lawn in the Uru Reserve and annual crop fields (soybean) in neighboring private farms (not all systems were sampled on all occasions). Nine earthworm species belonging to four families and five genera were found, of which six were native and three exotic species (Dichogaster gracilis, Amynthas gracilis, A. corticis). Of the native species, Urobenus brasiliensis and Andiorrhinus duseni (a large bodied-worm) are already well known from S and SE Brazil, while the remaining four were new species that require further description (Fimoscolex n.sp.1 and n.sp.2, Glossoscolex n.sp.1 and n.sp.2). In general, more species were found in February (summer) than March and November. The cropping system (soybean) had the lowest abundance and species richness in relation to other sites, although in the young and old forests no earthworms were found on some sample dates. Given the several new species found in this small reserve, and the relatively few sites studied thus far in the Campos Gerais, further efforts are needed to adequately characterize the earthworm fauna of the region, from which many other species are expected.


Subject(s)
Oligochaeta , Agriculture , Animals , Biodiversity , Brazil , Forests
15.
Zootaxa ; 4496(1): 517-534, 2018 Oct 04.
Article in English | MEDLINE | ID: mdl-30313720

ABSTRACT

Earthworm populations often increase with the adoption of no-tillage (NT) practices, but few studies have evaluated earthworm diversity in these agroecosystems. In the present study we assessed earthworm species richness in 40 sites under NT and six native Atlantic forest fragments in Western Paraná, Southern Brazil. At each site earthworms were sampled quantitatively (n=5) and qualitatively (n=5), by handsorting soil monoliths (20 x 20 cm width x 20 cm depth), totaling 460 samples overall. Earthworms were killed and fixed in 96% ethanol, counted and identified. Overall, 18 species were found, in the families Acanthodrilidae, Glossoscolecidae, Megascolecidae, Rhinodrilidae and Ocnerodrilidae, of which 10 were native and eight exotic. No-tillage agroecosystems had larger earthworm populations and higher species richness overall than native forests, although this was mainly due to colonization of these agricultural fields by exotic species. Mostly native species were found in the Atlantic forests, highlighting the importance of these habitats as refugia for native earthworm species conservation.


Subject(s)
Oligochaeta , Animals , Brazil , Forests , Soil
16.
Zootaxa ; 4496(1): 535-547, 2018 Oct 04.
Article in English | MEDLINE | ID: mdl-30313721

ABSTRACT

Earthworms are important macroinvertebrates that provide soil ecosystem services and are also useful environmental bioindicators. Urban areas around the world have major impacts on biodiversity and the objective of the present study was to assess the role of urban parks of Curitiba, Paraná State, in preserving native earthworm species. Earthworm populations were sampled in five parks (Barigui, Tingui, Barreirinha, Passaúna and the Botanic Garden), in two land use systems (grass lawns and secondary forest fragments) in two seasons, summer (November 2013) and winter (June 2014). A total of twelve earthworm species were identified, belonging to six families: Glossoscolex sp.1, Fimoscolex sp.1, sp.2 and sp.3 (Glossoscolecidae), Pontoscolex corethrurus (Rhinodrilidae), Eukerria tucumana (Ocnerodrilidae), Amynthas gracilis, Amynthas corticis, Metaphire californica (Megascolecidae), Aporrectodea rosea and Lumbricus rubellus (Lumbricidae), the latter being the first record for this species in Brazil. In addition, a single unidentified juvenile Dichogaster sp. (Acanthodrilidae) was found. Four new species were found and three out of five urban parks of Curitiba (especially the Botanic Garden) were able to preserve native species, though their abundance was low and exotic species (n=8) predominated, attributed to human disturbance that favors invasion and colonization of exotic earthworms.


Subject(s)
Oligochaeta , Animals , Brazil , Humans , Poaceae , Soil
17.
Anim Sci J ; 89(9): 1223-1229, 2018 Sep.
Article in English | MEDLINE | ID: mdl-29989300

ABSTRACT

The objective was to estimate genetic correlations between body weight (BW), scrotal circumference and visual evaluation scores of body conformation measured at standard ages in Guzerat cattle. All measurements were performed at 205 (weaning age), 365, 450 and 550 days of age; for BW, two additional measurements (at birth and 120 days of age) were realized. The data utilized in this study were retrieved from a database of the Brazilian Association of Zebu Breeders that contained information of registered Guzerat animals born between 1970 and 2013. Genetic parameters were estimated in bi-trait analyses by using Bayesian inference. Genetic correlations between BW at 205 and 450 days of age with other traits were high and positive, whereas the correlations between visual evaluation scores with other traits were moderate. Based on correlations herein obtained, we conclude that selection based on BW results in increased visual scores and scrotal circumference, leading to improvements in productive performance and animals with best body conformation.


Subject(s)
Body Constitution/genetics , Body Weight/genetics , Cattle/anatomy & histology , Cattle/genetics , Genetic Association Studies , Scrotum/anatomy & histology , Animals , Bayes Theorem , Cattle/growth & development , Male , Quantitative Trait, Heritable
18.
Vet Pathol ; 55(5): 622-633, 2018 09.
Article in English | MEDLINE | ID: mdl-29788797

ABSTRACT

The epithelial-mesenchymal transition (EMT) is a dynamic process linked to metastasis in many tumor types, including mammary tumors. In this study, we evaluated E-cadherin and vimentin immunolocalization in primary canine mammary carcinomas (20 cases) and their respective metastases, as well as their relationship with the core regulators SNAIL/SLUG. To assess the number of cells undergoing the process of EMT, we quantitated double-positive (E-cadherin+/vimentin+) cells using immunofluorescence, via cell counting and image analysis. In addition, SNAIL/SLUG expression was evaluated by established immunohistochemical methods. Primary tumors had significantly more E-cadherin+/vimentin+ co-expression than their paired respective lymph node or distant metastasis, respectively. Furthermore, the percentage of E-cadherin+/vimentin+ cells in grade II and III carcinomas was significantly higher than in grade I tumors. Primary tumors had significantly higher SNAIL/SLUG expression when analyzed based on the percentage of positive cells compared with their respective distant metastases in pairwise comparisons. An inverse correlation was noted between SNAIL/SLUG immunoreactivity and percentage of E-cadherin+/vimentin+ immunopositive cells in primary tumor samples when SNAIL/SLUG immunoreactivity was grouped into 2 categories (high versus low) based on percentage-positive staining. These results show a positive correlation between E-cadherin+/vimentin+ cells and higher tumor grade, establish differences between primary tumor and their respective metastases, and provide further support that EMT plays a critical role in the metastasis of canine mammary carcinoma. Furthermore, these data suggest that modulation of this process could provide greater therapeutic control and provide support for further research to determine if E-cadherin+/vimentin+ co-immunoreactivity imparts predictive value in the clinical outcome of patients with canine mammary carcinomas.


Subject(s)
Carcinoma/veterinary , Dog Diseases/pathology , Epithelial-Mesenchymal Transition , Mammary Neoplasms, Animal/pathology , Animals , Cadherins/metabolism , Carcinoma/pathology , Dogs , Female , Fluorescent Antibody Technique/veterinary , Mammary Glands, Animal/pathology , Vimentin/metabolism
19.
Pensar Prát. (Online) ; 20(3): 629-638, set. 2017.
Article in Portuguese | LILACS | ID: biblio-1046724

ABSTRACT

A intenção deste ensaio é apresentar uma reflexão sobre a necessidade de redimensionamento das atividades de leitura e discussão de textos para a Educação Física, com vistas a evidenciar questões polifônicas e subjetivas ­à luz de discussões bakhtinianas. A partir dos apontamen-tos realizados, abre-se um espaço para questionar o nível de leitura, eloquência e postura co-municativa de sujeitos em formação perante as leituras exigidas desde a graduação. É preciso desenvolver novas competências em relação à leitura no currículo dos cursos para a formação de professores para que se diminua o abismo entre o conhecimento adquirido e a demanda do mercado de trabalho em nossa área (AU).


The purpose of this paper is to present a reflection on the needto resize text reading and dis-cussion activities for Physical Education, in order to highlight polyphonic and subjective questions ­in the light of Bakhtinian discussions. From the notes made a space is opened to question the level of reading, eloquence and communicative approach of the subjects in for-mation before the readings required since graduation. We need to develop new skills in rela-tion to reading in the curriculum of courses for the training of teachers so that they decrease the gap between the knowledge acquired and the labor market demand in our area (AU).


La intención de este ensayo es presentar una reflexión sobre la necesidad de redimensiona-mientode las actividades de lectura y discusión de textos para la Educación Física, con el fin de evidenciar cuestiones polifónicas y subjetivas ­a la luz de discusiones en Bakhtin. A partir de los apuntamientos realizados, se abrió un espacio para cuestionar el nivel de lectura, elo-cuencia y postura comunicativa de sujetos en formación inicial ante las lecturas exigidas. Es necesario desarrollar nuevas habilidades en relación a la lectura en el currículo de los cursos para la formación del profesorado, con el objetivo de disminuir el abismo entre el conoci-miento adquirido y la demanda del mercado de trabajo en nuestra área (AU).


Subject(s)
Physical Education and Training , Reading , Professional Training
20.
Biosci. j. (Online) ; 33(3): 566-571, may/jun. 2017. graf
Article in English | LILACS | ID: biblio-966213

ABSTRACT

Although the productivity of common bean in Tocantins is economically favorable, it has been infected by various pathogens found in soil. Among the major diseases is the web blight and root rot caused by Rhizoctonia solani and collar rot caused by the fungus Sclerotium rolfsii. This study aimed to evaluate the fungitoxic activity of methanol extracts of eight plant species on the inhibition of mycelial growth of S. rolfsii and R. solani. The fungitoxic activities were carried out over the inhibition of mycelial growth by means in vitro assays. The extracts were applied in concentrations of 250, 500, 1000, 2500 e 5000 µg ml-1 in PDA culture medium. In bioassays, it was found the significant effect of plant, concentration and also their interaction on the antifungal activity of the extracts. However, some extracts showed no inhibition of mycelial growth of the pathogens studied. Among those who had higher inhibitions is the extract of Lantana trifolia, which inhibited the mycelial growth of S. rolfsii in all concentrations, being the same as 97% for the highest concentration. When the methanol extract of Piper amplum Kunth, inhibition of the highest concentration was 83% for S. rolfsii and 74% for R. solani. These results show the potential of methanolic extract of Lantana trifolia and Piper amplum Kunth in the control set of plant pathogens studied.


Apesar da produtividade do feijão comum no Tocantins ser economicamente favorável, o mesmo pode ser infectado por vários patógenos habitantes do solo, dentre as principais doenças encontra-se a mela e a podridão radicular causadas pelo fungo Rhizoctonia solani e a podridão do colo causada pelo fungo Sclerotium rolfsii. Este trabalho teve como objetivo avaliar a atividade fungitóxica dos extratos metanólicos de oito espécies vegetais sobre a inibição do crescimento micelial de Sclerotium rolfsii e Rhizoctonia solani. As atividades fungitóxicas foram realizadas perante a inibição do crescimento micelial por meio de ensaios in vitro, sendo os extratos aplicados nas concentrações de 250, 500, 1000, 2500 e 5000 µg ml-1 em meio de cultura BDA. Observou-se o efeito significativo dos fatores planta, concentração e também da interação destes sobre as atividades fungitóxicas. No entanto, alguns extratos não apresentaram inibição do crescimento micelial dos fitopatógenos estudados. Entre os que apresentaram maiores inibições encontra-se o extrato de Lantana trifolia, que inibiu o crescimento micelial do S. rolfsii em todas as concentrações, sendo o mesmo de 97% para a maior concentração. Já a concentração mais elevada do extrato metanólico de Piper amplum apresentou inibição de 83% sobre o crescimento micelial de S. rolfsii e 74% sobre o crescimento micelial de R. solani. Tais resultados evidenciam a potencialidade dos extratos metanólicos das folhas de Lantana trifolia e de Piper amplum no controle dos fitopatógenos estudados.


Subject(s)
Rhizoctonia , Mycelium/growth & development , Phaseolus , Fungi , Fungicides, Industrial , Noxae
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