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1.
BMC Genomics ; 24(1): 670, 2023 Nov 07.
Article in English | MEDLINE | ID: mdl-37936076

ABSTRACT

BACKGROUND: Broodstock nutritional programming improves the offspring utilization of plant-based diets in gilthead sea bream through changes in hepatic metabolism. Attention was initially focused on fatty acid desaturases, but it can involve a wide range of processes that remain largely unexplored. How all this can be driven by a different genetic background is hardly underlined, and the present study aimed to assess how broodstock nutrition affects differentially the transcriptome and genome-wide DNA methylome of reference and genetically selected fish within the PROGENSA® selection program. RESULTS: After the stimulus phase with a low fish oil diet, two offspring subsets of each genetic background received a control or a FUTURE-based diet. This highlighted a different hepatic transcriptome (RNA-seq) and genome-wide DNA methylation (MBD-seq) pattern depending on the genetic background. The number of differentially expressed transcripts following the challenge phase varied from 323 in reference fish to 2,009 in genetically selected fish. The number of discriminant transcripts, and associated enriched functions, were also markedly higher in selected fish. Moreover, correlation analysis depicted a hyper-methylated and down-regulated gene expression state in selected fish with the FUTURE diet, whereas the opposite pattern appeared in reference fish. After filtering for highly represented functions in selected fish, 115 epigenetic markers were retrieved in this group. Among them, lipid metabolism genes (23) were the most reactive following ordering by fold-change in expression, rendering a final list of 10 top markers with a key role on hepatic lipogenesis and fatty acid metabolism (cd36, pitpna, cidea, fasn, g6pd, lipt1, scd1a, acsbg2, acsl14, acsbg2). CONCLUSIONS: Gene expression profiles and methylation signatures were dependent on genetic background in our experimental model. Such assumption affected the magnitude, but also the type and direction of change. Thus, the resulting epigenetic clock of reference fish might depict an older phenotype with a lower methylation for the epigenetically responsive genes with a negative methylation-expression pattern. Therefore, epigenetic markers will be specific of each genetic lineage, serving the broodstock programming in our selected fish to prevent and mitigate later in life the risk of hepatic steatosis through changes in hepatic lipogenesis and fatty acid metabolism.


Subject(s)
Sea Bream , Animals , Sea Bream/genetics , Sea Bream/metabolism , Transcriptome , Epigenome , Fatty Acid Desaturases/genetics , Fatty Acids/metabolism
2.
Neuropediatrics ; 51(4): 276-285, 2020 08.
Article in English | MEDLINE | ID: mdl-32620025

ABSTRACT

OBJECTIVE: This study was aimed to investigate the prenatal findings in Aicardi syndrome (AIC) by intrauterine magnetic resonance imaging (iuMRI) suggesting possible diagnostic criteria and differential diagnosis. METHODS: The iuMRI features of nine AIC confirmed cases were described and then compared with those of postnatal MRI. Furthermore, all iuMRI cases with both corpus callosum (CC) agenesis-dysgenesis and cortical malformation (AIC mimickers) were retrospectively reviewed and compared with iuMRI AIC cases, in order to identify possible neuroradiological predictors of AIC syndrome. For this purpose, Chi-square statistic and binary logistic regression analysis were performed. RESULTS: In all AIC cases, iuMRI was able to detect CC agenesis-dysgenesis and cortical development anomalies. Postnatal MRI revealed some additional findings mainly including further cystic lesions and in two cases small coloboma. A statistically significant difference between AIC and AIC mimicker were found regarding sex, nodular heterotopias, posterior fossa abnormalities, coloboma, and cortical gyration abnormalities. The most predictive variables in the logistic regression model were cortical gyration abnormalities, coloboma, and sex. CONCLUSION: The iuMRI findings may suggest prenatal diagnosis of AIC syndrome with significant impact on parental counseling. Among possible differential diagnoses, tubulinopathies emerged.


Subject(s)
Aicardi Syndrome/diagnostic imaging , Magnetic Resonance Imaging , Malformations of Cortical Development/diagnostic imaging , Prenatal Diagnosis , Diagnosis, Differential , Female , Humans , Infant, Newborn , Male , Pregnancy , Retrospective Studies
3.
Animal ; 12(5): 923-930, 2018 May.
Article in English | MEDLINE | ID: mdl-29039295

ABSTRACT

The aquaculture industry depends upon the development of sustainable protein sources to replace fishmeal (FM) in aquafeeds and the products derived from soybeans are some of the most studied plant feedstuffs. A key area of investigation for continuing to improve modern aquafeeds includes the evaluation of varying proportions and combinations of plant ingredients to identify mixtures that are more efficiently utilized by the fish. This study investigated the effects of increasing soybean meal (SBM) by replacing a mix of plant ingredients in low FM (20%) diets on growth, blood biochemistry profile and gut histology on European sea bass. Five isonitrogenous and isolipidic experimental diets were formulated: four diets containing increasing SBM levels (0, 10, 20 and 30%; 0SBM, 10SBM, 20SBM and 30SBM, respectively) with a low content of FM (20%) and one control diet (0% SBM; 35% FM). Diets containing SBM brought to comparable performance and protein utilization, while 0SBM had negative impact on feed conversion rate and protein utilization. Blood parameters suggested an optimal nutritional status under all feeding treatments, even though slightly decreased values were reported at increasing dietary SBM. Histology examination did not show any changes indicative of soy-induced enteritis. We can conclude that for European sea bass: (i) different blends of plant protein did not affect feed intake despite the 20% FM dietary level; (ii) the inclusion of SBM maintains optimal growth and feed utilization in low FM diets; (iii) blood biochemistry profile showed a good nutritional status under all feeding regimes; (iv) no evidence of soy-induced enteritis was reported in any group fed low FM diets. For formulation of practical diets in on-growing of European sea bass, SBM up to 30% can be successfully incorporated into feeds containing low FM inclusion.


Subject(s)
Animal Feed/analysis , Bass/physiology , Animal Nutritional Physiological Phenomena , Animals , Aquaculture , Bass/blood , Bass/growth & development , Diet/veterinary , Plant Proteins , Glycine max/chemistry
4.
J Fish Biol ; 88(2): 690-708, 2016 Feb.
Article in English | MEDLINE | ID: mdl-26707938

ABSTRACT

To understand the effect of low dietary phosphorus (P) intake on the vertebral column of Atlantic salmon Salmo salar, a primary P deficiency was induced in post-smolts. The dietary P provision was reduced by 50% for a period of 10 weeks under controlled conditions. The animal's skeleton was subsequently analysed by radiology, histological examination, histochemical detection of minerals in bones and scales and chemical mineral analysis. This is the first account of how a primary P deficiency affects the skeleton in S. salar at the cellular and at the micro-anatomical level. Animals that received the P-deficient diet displayed known signs of P deficiency including reduced growth and soft, pliable opercula. Bone and scale mineral content decreased by c. 50%. On radiographs, vertebral bodies appear small, undersized and with enlarged intervertebral spaces. Contrary to the X-ray-based diagnosis, the histological examination revealed that vertebral bodies had a regular size and regular internal bone structures; intervertebral spaces were not enlarged. Bone matrix formation was continuous and uninterrupted, albeit without traces of mineralization. Likewise, scale growth continues with regular annuli formation, but new scale matrix remains without minerals. The 10 week long experiment generated a homogeneous osteomalacia of vertebral bodies without apparent induction of skeletal malformations. The experiment shows that bone formation and bone mineralization are, to a large degree, independent processes in the fish examined. Therefore, a deficit in mineralization must not be the only cause of the alterations of the vertebral bone structure observed in farmed S. salar. It is discussed how the observed uncoupling of bone formation and mineralization helps to better diagnose, understand and prevent P deficiency-related malformations in farmed S. salar.


Subject(s)
Calcification, Physiologic , Osteogenesis , Phosphorus/deficiency , Salmo salar/growth & development , Spine/abnormalities , Animals , Diet/veterinary , Phenotype , Phosphorus/physiology , Radiography , Salmo salar/abnormalities , Spine/diagnostic imaging
5.
Br J Nutr ; 111(10): 1759-72, 2014 May 28.
Article in English | MEDLINE | ID: mdl-24576359

ABSTRACT

The present study was carried out to investigate whether the dietary histidine requirement to reduce cataract development is higher than that for growth in Atlantic salmon smolts (Salmo salar L.) after seawater transfer and whether dietary vegetable oils contribute to cataractogenesis. Duplicate groups of salmon smolts were fed ten experimental diets with either fish oil (FO) or a vegetable oil (VO) mix replacing 70 % FO and histidine at five target levels (10, 12, 14, 16 and 18 g His/kg diet) for 13 weeks after seawater transfer. The VO diet-fed fish exhibited somewhat inferior growth and feed intakes compared with the FO diet-fed fish, irrespective of the dietary histidine concentration. Both cataract prevalence and severity were negatively correlated with the dietary histidine concentration, while lens N-acetyl-histidine (NAH) concentrations were positively correlated with it. The fatty acid profiles of muscle, heart and lens reflected that of the dietary oils to a descending degree and did not affect the observed cataract development. Muscle, heart and brain histidine concentrations reflected dietary histidine concentrations, while the corresponding tissue imidazole (anserine, carnosine and NAH) concentrations appeared to saturate differently with time. The expression level of liver histidase was not affected by the dietary histidine concentration, while the liver antioxidant response was affected in the VO diet-fed fish on a transcriptional level. The lowest severity of cataracts could be achieved by feeding 13·4 g His/kg feed, independently of the dietary lipid source. However, the present study also suggests that the dietary histidine requirement to minimise the risk of cataract development is 14·4 g His/kg feed.


Subject(s)
Cataract/prevention & control , Dietary Fats/metabolism , Histidine/analogs & derivatives , Histidine/administration & dosage , Lens, Crystalline/pathology , Nutritional Requirements/physiology , Salmo salar/growth & development , Animal Nutritional Physiological Phenomena , Animals , Dietary Supplements , Fish Oils/metabolism , Gene Expression , Histidine/analysis , Liver/metabolism , Myocardium/metabolism , Plant Oils/metabolism , RNA, Messenger/analysis , Salmo salar/metabolism , Seawater , Severity of Illness Index , Trace Elements/analysis
6.
Br J Nutr ; 104(10): 1460-70, 2010 Nov.
Article in English | MEDLINE | ID: mdl-20691125

ABSTRACT

The aim of the present study was to investigate the cataract preventive effect of dietary histidine regimes in adult Atlantic salmon (Salmo salar L.) in seawater, both through manipulating the dietary histidine level and feeding period. Mean body weight of individually tagged Atlantic salmon at the start of the experiment was 1662 (sd 333) g. Low prevalence of mild cataracts were recorded in the beginning of June. Three fishmeal and fish oil-based extruded diets (crude protein: 375 g/kg and fat: 342 g/kg), differing only in histidine content (low (L): 9.3, medium (M): 12.8 and high (H): 17.2 g histidine/kg diets), were fed to duplicate net pens in seawater. The experimental period was divided into three seasons (June-July; July-September; September-October), each starting and ending with individual cataract examination, assessment of somatic data, and sampling of lens and muscle tissues for analysis of histidine and histidine derivatives. In July and September, a part of the population fed L- and H-histidine feeds were transferred (crossed over) to respective series of replicate net pens fed L-, M- and H-histidine diets (i.e. eleven experimental feeding groups at trial conclusion). The fish doubled their body weight from June to October, with no systematic effects on weight gain of dietary histidine feeding regimes. Development of severe cataracts was observed between July and September. The cataract severity was directly related to the dietary histidine level fed during the first and second periods. Feeding histidine-supplemented diets (M or H) in the first period from June to July mitigated later cataract outbreaks. The status of selected free imidazoles in muscle and lens tissues reflected the dietary histidine feeding regimes, relative to both feed concentration and feeding duration. The study shows the risk for cataract development for adult Atlantic salmon, 1 year after the transfer of salmon smolts from freshwater to seawater, which to a major extent can be prevented by histidine supplementation just before and during the early phase of cataract development.


Subject(s)
Animal Feed/analysis , Cataract/veterinary , Diet/veterinary , Fish Diseases/prevention & control , Histidine/administration & dosage , Salmo salar , Amino Acids/analysis , Animal Nutritional Physiological Phenomena , Animals , Cataract/prevention & control , Cross-Over Studies , Dietary Supplements , Drug Administration Schedule , Fisheries , Histidine/analysis , Histidine/metabolism , Lens, Crystalline/chemistry , Muscle, Skeletal/chemistry , Muscle, Skeletal/metabolism , Seawater
7.
J Anim Sci ; 76(4): 1045-55, 1998 Apr.
Article in English | MEDLINE | ID: mdl-9581928

ABSTRACT

To evaluate the effects of dietary fats on the evolution of the fatty acid profile of swine backfat, 30 castrated Landrace x Duroc pigs averaging 26 kg were assigned three diets with 4% added pomace oil (O), hydrogenated fat (H), or linseed oil (L). Subcutaneous fat samples were taken from biopsies at 0, 17, 31, and 60 d, and at 24 h postmortem when pigs averaged 95 kg live weight at 82 d on trial. On d 17, saturated fatty acid (SFA) content was 2% lower for the O diet than for H and L (P < .089). There was a linear increase in SFA at a monthly rate of 2% in the three diets. The increase was mainly due to 18:0; palmitic acid percentages showed no variation. Pigs fed the O diet experienced exponential increases in monounsaturated fatty acids (MUFA), especially until d 17 (P < .001). In pigs fed the H or L diets, MUFA contents decreased at a monthly rate of 2.40%, and the same happened with oleic acid contents. Diets rich in (n-3) (L) and trans-fatty acids (H) caused exponential increases in swine backfat contents of total (n-3) and total trans, respectively. At d 31 (P < .001), 72 to 73% of the maximum contents had been reached. Contents for 20:3(n-3), 20:5(n-3), and 22:5(n-3) follow a pattern similar to that of their precursor 18:3(n-3), showing an exponential increase in pigs fed the L diet, and contents for H and O treatments were lower (P < .001). The three diets caused a linear decrease in (n-6) fatty acid contents throughout the 82-d trial.


Subject(s)
Adipose Tissue/chemistry , Animal Nutritional Physiological Phenomena , Body Composition/physiology , Dietary Fats, Unsaturated/administration & dosage , Fatty Acids, Monounsaturated/administration & dosage , Fatty Acids, Unsaturated/analysis , Swine/metabolism , Animals , Biopsy/veterinary , Cohort Studies , Dietary Fats, Unsaturated/classification , Fatty Acids, Monounsaturated/chemistry , Fatty Acids, Monounsaturated/classification , Fatty Acids, Omega-3/analysis , Fatty Acids, Omega-3/metabolism , Fatty Acids, Omega-6 , Fatty Acids, Unsaturated/metabolism , Male , Stereoisomerism , Time Factors
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