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1.
J Clin Transl Sci ; 7(1): e134, 2023.
Article in English | MEDLINE | ID: mdl-37396816

ABSTRACT

[This corrects the article DOI: 10.1017/cts.2023.503.].

2.
Sci Rep ; 10(1): 17724, 2020 10 20.
Article in English | MEDLINE | ID: mdl-33082360

ABSTRACT

Pyrosomes are tunicates in the phylum Chordata, which also contains vertebrates. Their gigantic blooms play important ecological and biogeochemical roles in oceans. Pyrosoma, meaning "fire-body", derives from their brilliant bioluminescence. The biochemistry of this light production is unknown, but has been hypothesized to be bacterial in origin. We found that mixing coelenterazine-a eukaryote-specific luciferin-with Pyrosoma atlanticum homogenate produced light. To identify the bioluminescent machinery, we sequenced P. atlanticum transcriptomes and found a sequence match to a cnidarian luciferase (RLuc). We expressed this novel luciferase (PyroLuc) and, combined with coelenterazine, it produced light. A similar gene was recently predicted from a bioluminescent brittle star, indicating that RLuc-like luciferases may have evolved convergently from homologous dehalogenases across phyla (Cnidaria, Echinodermata, and Chordata). This report indicates that a widespread gene may be able to functionally converge, resulting in bioluminescence across animal phyla, and describes and characterizes the first putative chordate luciferase.


Subject(s)
Luciferases/genetics , Urochordata , Animals , Biological Evolution , Chordata , Computational Biology , Evolution, Molecular , Gene Expression Profiling , Imidazoles , Luminescence , Luminescent Measurements , Models, Molecular , Phylogeny , Pyrazines , Sequence Alignment , Sequence Analysis, DNA , Species Specificity
3.
Protein J ; 39(2): 145-151, 2020 04.
Article in English | MEDLINE | ID: mdl-32096074

ABSTRACT

Biofluorescence has been found to be an increasingly widespread phenomenon in the ocean. The reclusive Caribbean chlopsid eel, Kaupichthys hyoproroides displays bright green fluorescence in its native marine environment. We have previously shown the fluorescence to be attributed to a fluorescent fatty acid-binding protein, Chlopsid FP, part of a larger family of fluorescent fatty acid-binding proteins, including the homologous UnaG. All require the addition of exogenous bilirubin for fluorescence. Here, we report the generation of a series of point mutants, and deletions that result in the quenching of fluorescence in Chlopsid FP. In addition, we report the binding constants of bilirubin to Chlopsid FP and mutants, measured by fluorescence titration. This study provides key insights into the potential mechanism of fluorescence in this class of fluorescent fatty acid-binding proteins.


Subject(s)
Bilirubin/metabolism , Eels , Fatty Acid-Binding Proteins/genetics , Fluorescence , Luminescent Proteins/genetics , Animals , Fatty Acid-Binding Proteins/metabolism , Protein Binding , Sequence Deletion
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