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1.
Stem Cells ; 2024 Aug 21.
Article in English | MEDLINE | ID: mdl-39167061

ABSTRACT

BACKGROUND: This study aims to address challenges in dental pulp regeneration therapy. The heterogeneity of DPSCs poses challenges, especially in stem cell transplantation for clinical use, particularly when sourced from donors of different ages and conditions. METHODS: Pseudotime analysis was employed to analyze single-cell sequencing data, and immunohistochemical studies were conducted to investigate the expression of fibronectin 1 (FN1). We performed in vitro sorting of PDGFRß+ DPSCs using flow cytometry. A series of functional assays, including cell proliferation, scratch, and tube formation assays, were performed to experimentally validate the vasculogenic capabilities of the identified PDGFRß+ DPSC subset. Furthermore, gene-edited mouse models were utilized to demonstrate the importance of PDGFRß+ DPSCs. Transcriptomic sequencing was conducted to compare the differences between PDGFRß+ DPSCs and P1-DPSCs. RESULTS: Single-cell sequencing analysis unveiled a distinct subset, PDGFRß+ DPSCs, characterized by significantly elevated FN1 expression during dental pulp development. Subsequent cell experiments demonstrated that this subset possesses remarkable abilities to promote HUVEC proliferation, migration, and tube formation. Gene-edited mouse models confirmed the vital role of PDGFRß+ DPSCs in dental pulp development. Transcriptomic sequencing and in vitro experiments demonstrated that the PDGFR/PI3K/AKT signaling pathway is a crucial factor mediating the proliferation rate and pro-angiogenic properties of PDGFRß+ DPSCs. CONCLUSION: We defined a new subset, PDGFRß+ DPSCs, characterized by strong proliferative activity and pro-angiogenic capabilities, demonstrating significant clinical translational potential.

2.
Sci Total Environ ; 948: 174674, 2024 Oct 20.
Article in English | MEDLINE | ID: mdl-39002594

ABSTRACT

Nanoplastics (NPs) are a common type of degraded plastic material associated with adverse health effects such as pulmonary injury. However, the molecular mechanism(s) underlying lung injury as caused by NPs remains uncertain. Thus, we herein investigated the pulmonary toxicity of NPs on RAW264.7 cells and C57BL/6 mice. Our in vitro study indicated that NPs induced oxidative stress, cell death, inflammation, and the activation of the cyclic GMP-AMP synthase (cGAS)-stimulator of interferon genes (STING)-signaling pathway. Mice in our in vivo study displayed significant pulmonary fibrosis, inflammation, apoptosis, necrosis, and excessive double-stranded DNA release into serum and bronchoalveolar lavage fluid. Our mechanistic exploration uncovered cGAS-STING-signaling activation as the leading cause of NPs-induced pulmonary fibrosis. The current study opens an avenue toward elucidating the role of the cGAS-STING-signaling pathway in NPs-induced pulmonary injury.


Subject(s)
DNA, Mitochondrial , Lung Injury , Nucleotidyltransferases , Signal Transduction , Animals , Mice , Lung Injury/chemically induced , Membrane Proteins/metabolism , Membrane Proteins/genetics , Mice, Inbred C57BL , Nanoparticles/toxicity , Nucleotidyltransferases/metabolism , Nucleotidyltransferases/genetics , RAW 264.7 Cells , Signal Transduction/drug effects
3.
Foods ; 13(9)2024 Apr 23.
Article in English | MEDLINE | ID: mdl-38731655

ABSTRACT

Litopenaeus vannamei protein (LVP) is a high-quality protein. However, its functional properties do not fully meet the needs of food processing. In this study, LVP-xylose conjugates were prepared by conventional wet heat method (GLVP) and ball-milling-assisted wet heat method (GBLVP), respectively. The changes in structure and functional properties of the glycosylated LVP were explored. The findings revealed that ball-milling pretreatment increased the grafting degree to 35.21%. GBLVP had a sparser surface structure and lower particle size than GLVP. FTIR spectra showed that xylose was grafted onto LVP successfully and GBLVP had the lowest α-helix content. Compared with GLVP, GBLVP had a decrease in intrinsic fluorescence intensity and surface hydrophobicity, and an increase in UV absorption intensity. Moreover, GBLVP had higher foaming capacity, solubility and water-holding capacity, and lower allergenicity than GLVP. However, ball-milling pretreatment had a negative impact on the vitro digestibility and oil-holding capacity of GBLVP. In conclusion, ball-milling-assisted treatment of glycosylation could effectively improve the functional properties of LVP, benefiting the broader application of LVP in the food industry.

4.
Int J Biol Macromol ; 265(Pt 2): 130521, 2024 Apr.
Article in English | MEDLINE | ID: mdl-38553396

ABSTRACT

Obesity was considered as a rapidly growing chronic disease that influences human health worldwide. In this study, we investigated the primary structure characteristics of Chinese yam polysaccharide (CYP) and its role in regulating lipid metabolism in a high-fat diet (HFD)-fed obese mice. The molecular weight of CYP was determined to be 3.16 × 103 kDa. Periodic acid oxidation & smith degradation and nuclear magnetic resonance results suggested that CYP consists of 1 → 2, 1 â†’ 2, 6, 1 â†’ 4, 1 â†’ 4, 6, 1→, or 1 â†’ 6 glycoside bonds. The in vivo experiment results suggested that the biochemical indices, tissue sections, and protein regulation associated with lipid metabolism were changed after administering CYP in obese mice. In addition, the abundances of short-chain fatty acid (SCFA)-producing bacteria Lachnospiraceae, Lachnospiraceae_NK4A136_group, and Ruminococcaceae_UCG-014 were increased, and the abundances of bacteria Desulfovibrionaceae and Ruminococcus and metabolites of arginine, propionylcarnitine, and alloisoleucine were decreased after CYP intervention in obese mice. Spearman's correlation analysis of intestinal flora, metabolites, and lipid metabolism parameters showed that CYP may affect lipid metabolism in obese mice by regulating the intestinal environment. Therefore, CYP may be used as a promising nutritional intervention agent for lipid metabolism.


Subject(s)
Diet, High-Fat , Dioscorea , Mice , Humans , Animals , Diet, High-Fat/adverse effects , Mice, Obese , Mice, Inbred C57BL , Obesity/drug therapy , Obesity/etiology , Obesity/metabolism , Lipid Metabolism , Polysaccharides/pharmacology
5.
Dev Biol ; 510: 8-16, 2024 Jun.
Article in English | MEDLINE | ID: mdl-38403101

ABSTRACT

Physiological root resorption is a common occurrence during the development of deciduous teeth in children. Previous research has shown that the regulation of the inflammatory microenvironment through autophagy in DDPSCs is a significant factor in this process. However, it remains unclear why there are variations in the autophagic status of DDPSCs at different stages of physiological root resorption. To address this gap in knowledge, this study examines the relationship between the circadian clock of DDPSCs, the autophagic status, and the periodicity of masticatory behavior. Samples were collected from deciduous teeth at various stages of physiological root resorption, and DDPSCs were isolated and cultured for analysis. The results indicate that the circadian rhythm of important autophagy genes, such as Beclin-1 and LC3, and the clock gene REV-ERBα in DDPSCs, disappears under mechanical stress. Additionally, the study found that REV-ERBα can regulate Beclin-1 and LC3. Evidence suggests that mechanical stress is a trigger for the regulation of autophagy via REV-ERBα. Overall, this study highlights the importance of mechanical stress in regulating autophagy of DDPSCs via REV-ERBα, which affects the formation of the inflammatory microenvironment and plays a critical role in physiological root resorption in deciduous teeth.


Subject(s)
Circadian Clocks , Root Resorption , Child , Humans , Root Resorption/genetics , Beclin-1/genetics , Circadian Rhythm/genetics , Stem Cells , Tooth, Deciduous
6.
Exp Eye Res ; 239: 109769, 2024 Feb.
Article in English | MEDLINE | ID: mdl-38154732

ABSTRACT

Genetic and environmental factors can independently or coordinatively drive ocular axis growth. Mutations in FRIZZLED5 (FZD5) have been associated with microphthalmia, coloboma, and, more recently, high myopia. The molecular mechanism of how Fzd5 participates in ocular growth remains unknown. In this study, we compiled a list of human genes associated with ocular growth abnormalities based on public databases and a literature search. We identified a set of ocular growth-related genes from the list that was altered in the Fzd5 mutant mice by RNAseq analysis at different time points. The Fzd5 regulation of this set of genes appeared to be impacted by age and light damage. Further bioinformatical analysis indicated that these genes are extracellular matrix (ECM)-related; and meanwhile an altered Wnt signaling was detected. Altogether, the data suggest that Fzd5 may regulate ocular growth through regulating ECM remodeling, hinting at a genetic-environmental interaction in gene regulation of ocular axis control.


Subject(s)
Frizzled Receptors , Microphthalmos , Animals , Humans , Mice , Frizzled Receptors/genetics , Frizzled Receptors/metabolism , Gene Expression Regulation , Wnt Signaling Pathway
7.
Sci Total Environ ; 904: 166295, 2023 Dec 15.
Article in English | MEDLINE | ID: mdl-37586540

ABSTRACT

The biological nitrogen removal (BNR) process in wastewater treatment plants generates a substantial volume of nitrous oxide (N2O), which possesses a potent greenhouse gas effect. A limited number of studies have systematically investigated the N2O emissions of anammox-based systems with different BNR processes under mainstream conditions. Based on extensive big data statistical analysis, it had been revealed that simultaneous nitritation, anammox and denitrification (SNAD), partial nitritation anammox (PNA) and partial denitrification anammox (PDA), exhibit significantly lower N2O emission factors when compared to traditional BNR processes. The median values for N2O emission factors were determined to be 1.01 %, 1.15 % and 1.43 % for SNAD, PNA and PDA, respectively. Based on nitrogen removal data and N2O emission factors, the N2O emissions from PNA, SNAD and PDA processes were calculated to be 0.016 g·d-1, 0.037 g·d-1 and 0.008 g·d-1, respectively. Furthermore, the machine learning models (SVM and ANN) exhibited excellent predictive performance for N2O emissions in the BNR processes. However, after removing environmental factors, the R2 value of the SVM model sharply decreased. The SHAP feature analysis demonstrated the significant impact of environmental factors on the accuracy of predictive performance in machine learning models. Spearman correlation analysis was employed to investigate the relationship between N2O emissions and operational factors as well as microbial communities. The results demonstrated a negative correlation between HRT, temperature and C/N with N2O emissions. Moreover, strong associations were observed between Nitrosomonas, Nitrospira, Denitratisoma, Thauera species and N2O emissions. The contribution of N2O production via AOB pathways played a key role that was quantitatively calculated to be 93 %, 80 % and 48 % in the PNA, SNAD and PDA processes, respectively. These findings highlight the potential of these innovative BNR processes in mitigating N2O emissions.


Subject(s)
Nitrogen , Nitrous Oxide , Nitrous Oxide/analysis , Nitrogen/metabolism , Denitrification , Anaerobic Ammonia Oxidation , Data Mining , Bioreactors , Sewage , Oxidation-Reduction
8.
Front Microbiol ; 14: 1128668, 2023.
Article in English | MEDLINE | ID: mdl-37089575

ABSTRACT

Introduction: Streptococcus mutans is the most prevalent biofilm-forming pathogen in dental caries, while Candida albicans is often detected in the presence of S. mutans. Methods: We aimed to evaluate the anti-caries effect of stevioside in medium trypticase soy broth (TSB) with or without sucrose supplementation compared with the same sweetness sucrose and xylitol in a dual-species model of S. mutans and C. albicans, based on planktonic growth, crystal violet assay, acid production, biofilm structural imaging, confocal laser scanning microscopy, and RNA sequencing. Results: Our results showed that compared with sucrose, stevioside significantly inhibited planktonic growth and acid production, changed the structure of the mixed biofilm, and reduced the viability of biofilm and the production of extracellular polysaccharides in dual-species biofilm. Through RNA-seq, Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway impact analysis showed that stevioside decreased sucrose metabolism and increased galactose and intracellular polysaccharide metabolism in S. mutans, and decreased genes related to GPI-modified proteins and secreted aspartyl proteinase (SAP) family in C. albicans. In contrast to xylitol, stevioside also inhibited the transformation of fungal morphology of C. albicans, which did not form mycelia and thus had reduced pathogenicity. Stevioside revealed a superior suppression of dual-species biofilm formation compared to sucrose and a similar anti-caries effect with xylitol. However, sucrose supplementation diminished the suppression of stevioside on S. mutans and C. albicans. Conclusions: Our study is the first to confirm that stevioside has anticariogenic effects on S. mutans and C. albicans in a dual-species biofilm. As a substitute for sucrose, it may help reduce the risk of developing dental caries.

9.
Heliyon ; 9(2): e13246, 2023 Feb.
Article in English | MEDLINE | ID: mdl-36755604

ABSTRACT

In this paper, the relationship between black liquor and microbial growth, enzymatic secretion and humus formation in composting was studied. The results showed that black liquor inoculation is an effective way to promote fermentation process. After black liquor inoculation, the abundance of Corynebacterium, Aequorivita, and Pedobacter, which have the catalase and oxidase activity, has been significantly increased. The enzymatic activity of alkaline phosphatase, catalase, peroxidase and invertase was 40 mg/(g·24h), 6.5 mg/(g·20 min), 13 100 mg/(g·24h), and 6100 mg/(g·24h) respectively at day 18. Humic acid and fulvic acid concentration was 12 g/kg and 11 g/kg which is higher than that of the treatments of no black liquor inoculation. The results suggested that black liquor inoculation was beneficial to indigenous microorganisms reproduce efficiently, then the secretion of enzymes related to cellulose, hemicellulose, and lipid hydrolysis, and the formation of humic substances.

10.
Dalton Trans ; 51(45): 17441-17453, 2022 Nov 21.
Article in English | MEDLINE | ID: mdl-36326162

ABSTRACT

One-pot conversion of furfural, a biomass-derived platform chemical, to gamma-valerolactone (GVL), a fuel additive and green solvent, involves multiple steps of hydrogenation. Among these reactions, the deep hydrogenation of the furan ring in furfural interrupts GVL formation over Ni or Co-based catalysts. In this study, a method of alloying Ni and Co with Fe over a ZSM-5 support was proposed for tackling excessive activity of the catalyst for hydrogenation. The results indicated that the formation of binary NiFe and CoFe alloys in Ni-Co-Fe/ZSM-5 enhanced the dispersion of metallic species, reduction of metal oxides, formation of more Lewis acidic sites, and the adsorption of the C-O functionality of the furan ring, while lowering the capability for adsorption/activation of H2 and the adsorption of the CC group of the furan ring. These factors together reduced the activity for the hydrogenation of the furan ring in furfural, but enhanced the hydrogenation of the CO in ethyl levulinate (EL). The kinetic study confirmed that the hydrogenation of EL was the rate-determining step. The coordination of the dual alloys, NiFe and CoFe, in the bifunctional Ni-Co-Fe/ZSM-5 catalyst rendered superior activity for selective one-pot conversion of furfural to GVL with a yield of 85.7%.


Subject(s)
Furaldehyde , Nickel , Hydrogenation , Cobalt , Alloys , Iron , Furans
11.
Front Nutr ; 9: 1017431, 2022.
Article in English | MEDLINE | ID: mdl-36424922

ABSTRACT

In this study, we investigated the structural features of the polysaccharide obtained from Craterellus cornucopioides (CCP2) by high-performance liquid chromatography, Fourier transform infrared spectroscopy and ion chromatography. The results showed that CCP2 was a catenarian pyranose that principally comprised of mannose, galactose, glucose, and xylose in the ratio of 1.86: 1.57: 1.00: 1.14, with a molecular weight of 8.28 × 104 Da. Moreover, the immunoregulation effect of CCP2 was evaluated both in vitro and in vivo. It displayed a remarkable immunological activity and activation in RAW264.7 cells by enhancing the phagocytosis of macrophages in a dose-dependent manner without showing cytotoxicity at the concentrations of 10-200 µg/mL in vitro. Additionally, Histopathological analysis indicated the protective function of CCP2 against immunosuppression induced by cyclophosphamide (Cy). Meanwhile, the intake of CCP2 had better immunoregulatory activity for immunosuppression BALB/c mice model. After prevention by CCP2, the spleen and thymus weight indexes of BALB/c mice model were significantly increased. The RT-qPCR and Western Blot results provided comprehensive evidence that the CCP2 could activate macrophages by enhancing the production of cytokines (IL-2, IL-6, and IL-8) and upregulating the protein expression of cell membrane receptor TLR4 and its downstream protein kinase (TRAF6, TRIF, and NF-κB p65) production of immunosuppressive mice through TLR4-NFκB p65 pathway. The results demonstrated that CCP2 could be a potential prebiotic and might provide meaningful information for further research on the immune mechanism.

12.
Food Funct ; 12(12): 5563-5575, 2021 Jun 21.
Article in English | MEDLINE | ID: mdl-34008607

ABSTRACT

Antibiotic treatment causes antibiotic-associated diarrhea (AAD), which is usually accompanied by disorders of the intestinal flora, aggravating the patient's condition. Recently, more attention has been devoted to the ability of plant polysaccharides to improve the body's flora and enhance immunity. However, reports on whether purple sweet potato polysaccharides (PSPPs) can improve AAD are scarce. This study aimed to extract a non-starch polysaccharide from purple sweet potato and analyze its structure and ability to regulate the intestinal flora of mice with AAD. The diarrhea model was established via intragastric administration of lincomycin and different concentrations of PSPPs (0.1 g kg-1, 0.2 g kg-1, and 0.4 g kg-1) to Balb/C mice. The results showed that PSPP was a pyran polysaccharide with 1 → 2, 1 → 2, 6, 1 → 4, 1 → 4, 6 glycosidic bonds in an α-configuration. In vivo experiments showed that PSPP could relieve diarrhea and improve the structural damage in the ileum caused by lincomycin hydrochloride. In addition, treatment with PSPPs decreased the levels of IL-1ß, IL-6 and TNF-α but increased the level of IL-10 in the intestines of mice (p < 0.01). The results of 16S rRNA sequencing showed that PSPPs changed the composition and diversity of the intestinal flora of mice with AAD. In addition, PSPP treatment increased the content of short-chain fatty acids (p < 0.01). These results revealed that PSPPs regulated the intestinal flora, balanced fatty acid metabolism, and relieved the symptoms of diarrhea to a certain extent in mice.


Subject(s)
Anti-Bacterial Agents/pharmacology , Diarrhea/drug therapy , Gastrointestinal Microbiome/drug effects , Ipomoea batatas/chemistry , Polysaccharides/pharmacology , Animals , Bacteria/classification , Bacteria/genetics , Cytokines/metabolism , Diarrhea/microbiology , Fatty Acids, Volatile , Gastrointestinal Microbiome/genetics , Ileum/pathology , Intestines/pathology , Male , Mice , Mice, Inbred BALB C , RNA, Ribosomal, 16S
13.
Food Funct ; 11(7): 6054-6065, 2020 Jul 01.
Article in English | MEDLINE | ID: mdl-32558848

ABSTRACT

In this study, a triple-helix Chinese Iron Yam polysaccharide (CIYP) with a molecular weight of 1.67 × 103 kDa was obtained. The CIYP was extracted with deionized water followed by deproteination, decoloration and purification using anion-exchange chromatography and size exclusion chromatography. Its structural characteristics and micromorphology were investigated by GC-MS, periodate oxidation and Smith degradation, FT-IR, NMR spectroscopy, SEM and AFM. The results showed that CIYP is a catenarian polysaccharide composed of rhamnose, arabinose, mannose, glucose, galactose and galacturonic acid in the ratio of 1 : 1.33 : 8.31 : 2.83 : 1.12 : 2.62. Meanwhile, the gastric mucosa protective effect of CIYP on an ethanol-injured BALB/c mouse model was investigated. It was found that the preventive CIYP-treatment groups (200 and 400 mg kg-1 d-1) showed gastric mucosa protective effects on the BALB/c mouse model. The lesion index and lesion inhibition rate of the CIYP and cimetidine treatment groups were significantly altered compared with the ethanol-induced gastric mucosal lesion (GML) group. Moreover, the administration of CIYP showed definite effects of increasing the NO, PGE2 and EGF levels, and SOD activities, and reducing the MDA levels of gastric mucosa tissues to prevent gastric oxidative stress. Histopathological analysis indicated that the microscopic morphology of gastric mucosal tissues was changed after being damaged by ethanol and the damage was significantly reduced after CIYP administration. Finally, the western blot and quantitative real-time polymerase chain reaction (qRT-PCR) results provided comprehensive evidence that the CIYP could repress gastric inflammation through the reduction of IL-1ß, TNF-α and IL-6, prevent gastric oxidative stress through the inhibition of lipid peroxides, and favor cell survival via downregulating the TAK1, MKK3, P-p38 and Bax levels and upregulating the protein expression levels, compared with the CIM group.


Subject(s)
Dioscorea/chemistry , Ethanol/adverse effects , Gastric Mucosa/drug effects , Oxidative Stress/drug effects , Plant Extracts/pharmacology , Polysaccharides/pharmacology , Stomach Ulcer/metabolism , Animals , Cytokines/metabolism , Dinoprostone/metabolism , Disease Models, Animal , Gastric Mucosa/metabolism , Gastric Mucosa/pathology , Gastrointestinal Agents/pharmacology , Gastrointestinal Agents/therapeutic use , Humans , Intracellular Signaling Peptides and Proteins/metabolism , MAP Kinase Kinase 3/metabolism , Male , Malondialdehyde/metabolism , Mice, Inbred BALB C , Molecular Structure , Nitric Oxide/metabolism , Plant Extracts/therapeutic use , Plant Tubers/chemistry , Polysaccharides/chemistry , Polysaccharides/therapeutic use , Protective Agents/pharmacology , Protective Agents/therapeutic use , Stomach Ulcer/etiology , Stomach Ulcer/prevention & control , Superoxide Dismutase/metabolism , bcl-2-Associated X Protein/metabolism
14.
Int J Biol Macromol ; 160: 871-879, 2020 Oct 01.
Article in English | MEDLINE | ID: mdl-32504709

ABSTRACT

The immunoregulatory effect and immunologic response mechanism of Craterellus cornucopioides (L.) Pers. polysaccharide (CCP) with a triple-helix structure on peritoneal macrophages was investigated in vitro for the first time. These studies demonstrated that treatment of peritoneal macrophages with 80 µg/mL CCP for 48 h significantly strengthened their phagocytic function as well as increases the activities of lysozyme (LZM), acid phosphatase (ACP) and succinodehydrogenase (SDH) when compared with the untreated group. Furthermore, Western Blot and quantitative real-time polymerase chain reaction (qRT-PCR) assays demonstrated that 80 µg/mL CCP activated macrophages, significantly increased mRNA expression of cytokines (IL-8, IL-1ß, IFN-α and TNF-α) and upregulated the protein expression of cell membrane receptor TLR4, as well as its downstream protein kinase products (MyD88, TAK1, P-IKKα/ß and P-MEK) through activation of the TLR4-NFκB pathway in peritoneal macrophages. In conclusion, these results showed that the immunomodulatory mechanism of CCP in peritoneal macrophages was associated with the release of NO, related enzymes and cytokines by stimulating the NF-κB p50 pathway via TLR4-MyD88-TAK1 signaling.


Subject(s)
Basidiomycota/chemistry , Fungal Polysaccharides/chemistry , Fungal Polysaccharides/pharmacology , Immunologic Factors/chemistry , Immunologic Factors/pharmacology , NF-kappa B/metabolism , Signal Transduction/drug effects , Toll-Like Receptor 4/metabolism , Animals , Cytokines/metabolism , Female , Inflammation Mediators/metabolism , Macrophages, Peritoneal/drug effects , Macrophages, Peritoneal/metabolism , Mice , Mice, Inbred BALB C , Models, Biological , Phagocytosis/genetics , Phagocytosis/immunology
15.
DNA Cell Biol ; 39(4): 709-723, 2020 Apr.
Article in English | MEDLINE | ID: mdl-32045271

ABSTRACT

Head and neck squamous cell carcinoma (HNSCC) is the sixth malignancy, which is characterized by poor prognosis or high mortality because of the lack of predicting markers. Aberrant cancer pseudogenes have been found predictive for prognosis. We aim to identify a pseudogene-based prognosis signature for HNSCC by machine learning. RNA-seq data were downloaded from The Cancer Genome Atlas, and 700 differentially-expressed pseudogenes were identified. The survival-related pseudogenes were screened through COX-regression analysis, which includes univariate regression, least absolute shrinkage and selection operator regression, and multivariate regression, and a five-pseudogene signature was constructed. The value of prediction for the signature was validated in multiple subgroups in terms of survival. Gene set enrichment analysis (GSEA) and coexpression analysis were used to determine the underlying biological functions. Seven hundred dysregulated pseudogenes were identified, and the five-pseudogene signature can distinguish the low-risk and high-risk patients for both training and testing sets and predicted prognosis with high sensitivity and specificity. Furthermore, the signature was applicable to patients of different genders, ages, stages, and grades. Coexpression analysis revealed that the five-pseudogene is associated with immune system. GSEA showed cancer-related biological process and pathways the five-pseudogene involved in. The five-pseudogene signature is not only a novel marker for prognosis but also a promising signature for monitoring therapeutic schedule. Therefore, our findings may have potential clinical significance.


Subject(s)
Biomarkers, Tumor/genetics , Machine Learning , Pseudogenes/genetics , RNA, Untranslated/genetics , Squamous Cell Carcinoma of Head and Neck/genetics , Transcriptome/genetics , Databases, Genetic , Female , Gene Expression Regulation, Neoplastic/genetics , Humans , Male , Prognosis , Squamous Cell Carcinoma of Head and Neck/mortality , Squamous Cell Carcinoma of Head and Neck/pathology
16.
J Cancer Res Clin Oncol ; 146(3): 621-630, 2020 Mar.
Article in English | MEDLINE | ID: mdl-32067104

ABSTRACT

PURPOSE: Head and neck squamous cell carcinoma (HNSCC) is a common cancer with high mortality and poor prognosis partially owing to lack of application of predictive markers. Increasing evidence has suggested that metabolic dysregulation plays an important part in tumorigenesis. We aim to identify a prognostic metabolic pathway (MP) signature in HNSCC. METHODS: Single sample gene-set enrichment analysis (ssGSEA) was used in metabolic gene sets to develop a metabolism-based prognostic risk score (MPRS) for HNSCC using Cox regression analysis (univariate, LASSO, and stepwise multiple cox analysis), which was then validated in different subgroups, and association with clinical and mutational features was analyzed. RESULTS: Seventy-two dysregulated metabolic pathways were identified, and a six-MP signature (6MPS) was constructed which can effectively distinguish between the high- and low-risk patients in both training and testing sets, accompanied with high sensitivity and specificity (AUC = 0.7) in prognosis prediction. 6MPS was also applicable to patients of different subgroups. Furthermore, 6MPS is not only an independent prognostic predictor but also associated with clinicopathological and mutational features. Higher tumor stage and tumor mutation burden (TMB) have a higher MPRS. CONCLUSION: 6MPS functions not only as a promising predictor of prognosis and survival but also as potential marker for therapeutic schedule monitoring.


Subject(s)
Biomarkers, Tumor/metabolism , Squamous Cell Carcinoma of Head and Neck/metabolism , Adult , Aged , Female , Gene Expression Profiling , Humans , Kaplan-Meier Estimate , Male , Middle Aged , Prognosis , Risk Factors , Sensitivity and Specificity , Squamous Cell Carcinoma of Head and Neck/genetics , Squamous Cell Carcinoma of Head and Neck/mortality , Transcriptome
17.
Food Funct ; 10(8): 4998-5007, 2019 Aug 01.
Article in English | MEDLINE | ID: mdl-31355400

ABSTRACT

Grifola Frondosa, the king of mushrooms, is one of the most valued traditional medicines and has been used as a health food for a long time in China, Japan, and other Asian countries. The present study was designed to evaluate the immune-modulating effects of water-soluble polysaccharides from the Grifola Frondosa fruiting body (GFP) by using mouse peritoneal macrophage and cytoxan (CTX) induced immunosuppression models. Compared with CTX-induced immunosuppressive mice, the spleen and thymus indexes in mice with GFP orally administrated were significantly increased, body weight loss was alleviated, and the natural killer (NK) cytotoxicity and the proliferative activities of lymphocytes were elevated. Furthermore, levels of interleukin-2 (IL-2), interferon-6 (IL-6) and tumor necrosis factor-α (TNF-α) were notably reduced by CTX, while GFP abolished these effects. GFP also effectively increased total antioxidant capacity and superoxidase dismutase, catalase and glutathione peroxidase activities, and inhibited an increase in the malondialdehyde level. Histopathological analysis of spleens revealed the protective effect of GFP against CTX-induced immunosuppression. Western blotting results showed that GFP possessed immunomodulatory activity by up-regulating transcription factors (p-JAK2/JAK2, p-STAT3/STAT3 and SOCS3) in JAK2/STAT3/SOCS signaling pathways. This study suggested that GFP may provide an alternative strategy for lessening chemotherapy-induced immunosuppression.


Subject(s)
Antineoplastic Agents, Alkylating/adverse effects , Cyclophosphamide/adverse effects , Grifola/chemistry , Immune System Diseases/drug therapy , Janus Kinase 2/immunology , Polysaccharides/administration & dosage , Protective Agents/administration & dosage , STAT3 Transcription Factor/immunology , Suppressor of Cytokine Signaling 3 Protein/immunology , Animals , Female , Humans , Immune System Diseases/etiology , Immune System Diseases/genetics , Immune System Diseases/immunology , Immunosuppression Therapy , Interleukin-2/genetics , Interleukin-2/immunology , Janus Kinase 2/genetics , Killer Cells, Natural/drug effects , Killer Cells, Natural/immunology , Mice , Mice, Inbred BALB C , STAT3 Transcription Factor/genetics , Signal Transduction/drug effects , Suppressor of Cytokine Signaling 3 Protein/genetics
18.
Food Funct ; 10(6): 3262-3271, 2019 Jun 19.
Article in English | MEDLINE | ID: mdl-31089650

ABSTRACT

Polysaccharides are closely associated with immune regulation. In this study, the aim was to investigate the effect of polysaccharides from Cordyceps gunnii mycelia (PPS) in cyclophosphamide (CTX)-induced immunodeficient mice. Compared with the CTX-induced immunosuppressed mice, the spleen and thymus indexes in mice with orally administered PPS were significantly increased, body weight loss was alleviated, and the natural killer (NK) cytotoxicity and proliferative activities of the lymphocytes were elevated. The recovery of peripheral white blood cells, red blood cells, hemoglobins and platelets was accelerated. Furthermore, the results from ELISA showed that PPS could up-regulate the serum levels of IL-2, IL-12, IFN-γ and IgG, and reduce the level of TGF-ß. Histopathological analysis of the spleen revealed the protective effect of PPS against CTX-induced immunosuppression. Western blotting results showed that PPS possessed immunomodulatory activity via TLR4/TRAF6/NF-κB signalling pathways. Finally, the intestinal absorption of PPS was poor, as detected in the Caco-2 transwell system. Taken together, these findings suggest that PPS plays a crucial role in protection against immunosuppression in cyclophosphamide-treated mice and could be a potential candidate for use in immune therapy regimens.


Subject(s)
Cordyceps/chemistry , Immune System Diseases/prevention & control , Immunologic Factors/administration & dosage , Polysaccharides/administration & dosage , TNF Receptor-Associated Factor 6/immunology , Toll-Like Receptor 4/immunology , Animals , Cyclophosphamide/adverse effects , Female , Humans , Immune System Diseases/chemically induced , Immune System Diseases/immunology , Immunologic Factors/chemistry , Immunologic Factors/isolation & purification , Immunosuppression Therapy , Mice , Mice, Inbred BALB C , Mycelium/chemistry , NF-kappa B/genetics , NF-kappa B/immunology , Polysaccharides/chemistry , Polysaccharides/isolation & purification , TNF Receptor-Associated Factor 6/genetics , Toll-Like Receptor 4/genetics
19.
Food Funct ; 10(1): 304-314, 2019 Jan 22.
Article in English | MEDLINE | ID: mdl-30574978

ABSTRACT

A water-soluble polysaccharide (BP-1) was extracted and purified from highland barley (Hordeum vulgare L.) and its average molecular weight was about 6.7 × 104 Da. In this study, the immunomodulatory activity of BP-1 on the immunosuppressive BALB/c mice model and its molecular mechanism were elucidated. It was found that the weight indexes of spleen and thymus were significantly increased by BP-1 (80 mg kg-1 and 160 mg kg-1) treatment in the immunosuppressive mice model. The results showed that BP-1 (80 mg kg-1 and 160 mg kg-1) could significantly increase the number of bone marrow cells (BMC) and peripheral blood white blood cells (WBC) in the immunosuppressive mice model. In addition, the result further confirmed that BP-1 could increase the serum levels of IL-2, TNF-α and IFN-γ, so as to improve the immune function of immunosuppressive mice. The results showed that BP-1 (80 mg kg-1 and 160 mg kg-1) could promote the proliferation of spleen cells and the natural killer (NK) cell activity in vivo. The quantitative real-time polymerase chain reaction (qRT-PCR) and ELISA results revealed that BP-1 (80 mg kg-1 and 160 mg kg-1) could enhance the production of IL-2, TNF-α, IFN-γ, IgG and IgM in the spleen of immunosuppressive mice. The HE (hematoxylin and eosin) stained histopathological images showed that BP-1 (80 mg kg-1 and 160 mg kg-1) could repair the damage induced by CTX in the spleen cells of immunosuppressive mice. The result of macrophages showed that BP-1 (80 mg kg-1 and 160 mg kg-1) could promote the proliferation and phagocytosis activity of macrophages in immunosuppressive mice. Furthermore, BP-1 could activate macrophages by the TLR-4, TRAF6, TAK1 and nuclear factor κB (NF-κB) p65 pathways in vivo. These results suggested that BP-1 has a remarkable immunomodulatory activity on the immunosuppressive mice model.


Subject(s)
Hordeum/chemistry , Immunologic Factors/pharmacology , Plant Extracts/pharmacology , Polysaccharides/pharmacology , Animals , Female , Immunologic Factors/isolation & purification , Immunosuppression Therapy , Macrophages/drug effects , Macrophages/immunology , Mice , Mice, Inbred BALB C , NF-kappa B/genetics , NF-kappa B/immunology , Phagocytosis/drug effects , Plant Extracts/isolation & purification , Polysaccharides/isolation & purification , Tumor Necrosis Factor-alpha/genetics , Tumor Necrosis Factor-alpha/immunology
20.
RSC Adv ; 9(58): 33684-33692, 2019 Oct 18.
Article in English | MEDLINE | ID: mdl-35528887

ABSTRACT

The TGF-ß1/Smad signaling pathway has been linked to hepatic fibrosis. Previous studies have shown that yellow polysaccharide can prevent the development of hepatic fibrosis. However, it is unclear whether the polysaccharide affects the TGF-ß1/Smad signaling pathway. In this experiment, 50 experimental rats were randomly divided into a normal control group, model group, low GFP dose group (50 mg kg-1), medium GFP dose group (100 mg kg-1), and high GFP dose group (200 mg kg-1). A cirrhotic portal hypertension rat model was established by a CCl4 compound method. After 12 weeks of intragastric administration, the liver index of the medium dose and high dose group was significantly lower than that of the model group. The hepatic fibrosis lesions of rats in each dose group were improved to different extents, and the effect was most significant in the high dose group. The contents of ALT, AST, TBIL and CIV, PCIII, LN and HA in serum were significantly decreased. The activity of SOD and GSH-Px in the liver tissue of GFP medium and high dose groups was significantly increased and the content of MDA was significantly decreased. The contents of TNF-α, IL-1ß and IL-6 were significantly decreased. The western blot results showed that the expressions of p-Smad 2/3, Smad4, PAI-1, Imp7 and Imp8 in medium dose and high dose groups were significantly lower than those in the model group, while the expression of Smad7 was significantly higher than that of the model group. The GFP-treated group was able to reduce the expression level of mi R-154 in liver tissue and increase the expression level of miR-146a. GFP has a significant intervention effect on rat hepatic fibrosis, and its mechanism may inhibit the progression of hepatic fibrosis by inhibiting oxidative stress and inflammatory response and regulating TGF-ß1/Smad signaling pathway and mi RNA expression.

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