Terahertz Spectroscopic Molecular Sensor for Rapid and Highly Specific Quantitative Analytical Gas Sensing.

Quantitative analytical gas sampling is of great importance in a range of environmental, safety, and scientific applications. In this article, we present the design, operation, and performance of a recently developed tabletop terahertz (THz) spectroscopic molecular sensor capable of rapid (minutes) and sensitive detection of polar gaseous analytes with near "absolute" specificity. A novel double-coil absorption cell design and an array of room-temperature sorbent-based preconcentration modules facilitate quantitative THz detection of light polar volatile compounds, which often challenge the capabilities of established gas sensing techniques. Acetone, ethanol, methanol, acetaldehyde, formaldehyde, and isoprene are detected at low parts-per-billion to high parts-per-trillion levels. This work evaluates performance-limiting factors for THz spectroscopy-based chemical identification: (1) spectral signal to noise and (2) preconcentrator efficiency.

Widespread convergent evolution of alpha-neurotoxin resistance in African mammals.

Convergent evolution is central to the study of adaptation and has been used to understand both the limits of evolution and the diverse patterns and processes which result in adaptive change. Resistance to snake venom alpha-neurotoxins (αNTXs) is a case of widespread convergence having evolved several times in snakes, lizards and mammals. Despite extreme toxicity of αNTXs, substitutions in its target, the nicotinic acetylcholine receptor (nAChR), prevent αNTX binding and render species resistant. Recently, the published meerkat (Herpestidae) genome revealed that meerkats have the same substitutions in nAChR as the venom-resistant Egyptian mongoose (Herpestidae), suggesting that venom-resistant nAChRs may be ancestral to Herpestids. Like the mongoose, many other species of feliform carnivores prey on venomous snakes, though their venom resistance has never been explored. To evaluate the prevalence and ancestry of αNTX resistance in mammals, we generate a dataset of mammalian nAChR using museum specimens and public datasets. We find five instances of convergent evolution within feliform carnivores, and an additional eight instances across all mammals sampled. Tests of selection show that these substitutions are evolving under positive selection. Repeated convergence suggests that this adaptation played an important role in the evolution of mammalian physiology and potentially venom evolution.

Range resolved mode mixing in a large volume for the mitigation of speckle and strategic target orientation requirements in active millimeter-wave imaging.

In spite of many reports of active millimeter-wave imaging in the literature, speckle and requirements for cooperative target orientation significantly reduce its practical usefulness. Here we report a new technique, range resolved mode mixing (RRMM), which significantly mitigates both of these issues. It also provides a three-dimensional (3D) image. RRMM accomplishes this by combining multimode illumination (which eliminates the requirement for cooperative target orientation) with range resolution (which provides statistical independence of speckle patterns for averaging and the 3D image). The use of a 5W extended interaction klystron amplifier results in large signal margins in the 50 m scale atrium of the Physics Department at Ohio State University. It appears that there are a number of scenarios out to a range of 1 km for which this approach is useful to provide 3D images, with minimal speckle, and no requirement for cooperative target orientation.

Use of FTA technology for detection of Trichomonas gallinae.

Trichomonas gallinae is the causative agent for avian trichomonosis, which can have important population implications for domestic turkeys, columbids, raptors, and various passeriformes. Continued population surveillance and genotype distribution is needed to elucidate transmission dynamics and prevalence of T. gallinae among free-ranging birds. However, obtaining live cultures for laboratory testing is logistically challenging, limiting the ability to perform surveillance and genotype investigations. In this study, we evaluated non-indicating FTA Elute cards as a potential sampling storage substrate for downstream use in molecular identification of two T. gallinae isolates. Isolate concentrations of 10 or 100 trichomonads/40 µl were inoculated onto a FTA Elute card in triplicate. At each time point (48 h, 2 weeks, and 3 weeks), DNA elution procedures were performed on the cards, and the eluents were analyzed by conventional polymerase chain reaction (PCR) using trichomonad-specific primers. Three PCR-positive samples were detected at 48 h from one isolate; however, all eluents from cards held for 2 and 3 weeks were PCR-negative. Our results suggest that use of FTA Elute cards for nucleic acid storage can lead to low PCR sensitivity of T. gallinae in low concentrations, such as those found in non-clinical birds; however, more research is needed to fully evaluate the efficacy of FTA Elute cards as a diagnostic tool for T. gallinae.

Elimination of speckle and target orientation requirements in millimeter-wave active imaging by modulated multimode mixing illumination.

Active imaging can provide significantly larger signal margins in the millimeter-wave spectral region than passive imaging, especially indoors-an important application for which there is no cold sky illumination. However, coherent effects, such as speckle, negate much of this advantage by destroying image clarity and target recognition. Moreover, active imaging demonstrations often use strategically chosen target orientations to optimally reflect power from the active illuminator back to the imaging receiver. In this paper we will discuss and show experimental results for a new active imaging approach that largely eliminates coherent effects and the need for optimized target orientation. The work described uses a synthesized harmonic multiplier chain to drive a 5 W extended interaction klystron at 218.4 GHz, a mechanical mode mixer to illuminate and modulate many modes, and a heterodyne receiver coupled into a 60 cm scanning mirror. Large signal margins were obtained in this ~50 m range work, showing paths to imaging at ~1 km, imaging with considerably less powerful illuminators, and the use of focal plane arrays.

Infrared spectroscopy of solid hydrogen sulfide and deuterium sulfide.

The infrared spectra of solid hydrogen sulfide (H2S) and deuterium sulfide (D2S) were collected at very low temperatures. Vapor deposition of thin films at the lowest temperature of 10 K produced amorphous solids while deposition at 70 K yielded the crystalline phase III. Infrared interference fringe patterns produced by the films during deposition were used to determine the film thickness. Careful measurement of the integrated absorbance peaks, along with the film thickness, allowed determination of the integrated band intensities. This report represents the first complete presentation of the infrared spectra of the amorphous solids. Observations of peaks near 3.915 and 1.982 microm (ca. 2554 and 5045 cm(-1), respectively) may be helpful in the conclusive identification of solid hydrogen sulfide on the surface of Io, a moon of Jupiter.

Infrared spectroscopy of the solid phases of ammonia.

Thin films of solid ammonia (NH(3) and ND(3)) have been characterized using low temperature (25-110 K) Fourier-transform infrared (FTIR) spectroscopy, and the three solid phase (amorphous, metastable, and crystalline) spectra are reported. This work has been motivated by confusion in the literature about the metastable and crystalline phases as a result of an early erroneous report by Staats and Morgan [(J. Chem. Phys. 31, 553 (1959)]. Although the crystalline phase has subsequently been reported correctly, the metastable phase has not been described in the literature in detail. The unique characteristics of the metastable phase, reported here for the first time, include multiple peaks in the nu(2) and nu(3) regions and peak intensities that are dependent on the deposition temperature. This behavior may be the result of (a) preferential molecular orientations in the solid, or (b) exciton splitting due to different crystal shapes in the solid. The amorphous and metastable phases of deuterated ammonia are also reported for the first time.

Origin of the acidity enhancement of formic acid over methanol: resonance versus inductive effects.

Density functional theory calculations were employed to study the relative contribution of resonance versus inductive effects toward the 37 kcal/mol enhanced gas-phase acidity (DeltaH degrees (acid)) of formic acid (1) over methanol (2). The gas-phase acidities of formic acid, methanol, vinyl alcohol (5), and their vinylogues (6, 8, and 9) were calculated at the B3LYP/6-31+G level of theory. Additionally, acidities were calculated for the formic acid and vinyl alcohol vinylogues in which the formyl group and the vinyl group, respectively, were perpendicular to the rest of the conjugated system. Comparisons among these calculated acidities suggest that inductive effects are the predominant effects responsible for the enhanced acidity of formic acid over methanol, accounting for between roughly 62% and 65% of the total enhanced acidity; the remaining 38% to 35% of the acidity enhancement appears to be due to resonance effects. Further comparisons suggest that resonance effects are between roughly 58% and 65% of the 26 kcal/mol calculated acidity enhancement of vinyl alcohol over methanol, and the remaining 42% to 35% are due to inductive effects.