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1.
J Am Med Inform Assoc ; 28(4): 832-838, 2021 03 18.
Article in English | MEDLINE | ID: mdl-33517389

ABSTRACT

OBJECTIVE: IBM(R) Watson for Oncology (WfO) is a clinical decision-support system (CDSS) that provides evidence-informed therapeutic options to cancer-treating clinicians. A panel of experienced oncologists compared CDSS treatment options to treatment decisions made by clinicians to characterize the quality of CDSS therapeutic options and decisions made in practice. METHODS: This study included patients treated between 1/2017 and 7/2018 for breast, colon, lung, and rectal cancers at Bumrungrad International Hospital (BIH), Thailand. Treatments selected by clinicians were paired with therapeutic options presented by the CDSS and coded to mask the origin of options presented. The panel rated the acceptability of each treatment in the pair by consensus, with acceptability defined as compliant with BIH's institutional practices. Descriptive statistics characterized the study population and treatment-decision evaluations by cancer type and stage. RESULTS: Nearly 60% (187) of 313 treatment pairs for breast, lung, colon, and rectal cancers were identical or equally acceptable, with 70% (219) of WfO therapeutic options identical to, or acceptable alternatives to, BIH therapy. In 30% of cases (94), 1 or both treatment options were rated as unacceptable. Of 32 cases where both WfO and BIH options were acceptable, WfO was preferred in 18 cases and BIH in 14 cases. Colorectal cancers exhibited the highest proportion of identical or equally acceptable treatments; stage IV cancers demonstrated the lowest. CONCLUSION: This study demonstrates that a system designed in the US to support, rather than replace, cancer-treating clinicians provides therapeutic options which are generally consistent with recommendations from oncologists outside the US.


Subject(s)
Clinical Decision-Making , Decision Support Systems, Clinical , Medical Oncology , Neoplasms/therapy , Artificial Intelligence , Humans , Neoplasm Staging , Thailand , Therapy, Computer-Assisted
2.
Int J Oncol ; 40(2): 577-82, 2012 Feb.
Article in English | MEDLINE | ID: mdl-22076560

ABSTRACT

Initiation of protein translation by the 5' mRNA cap is a tightly regulated step in cell growth and proliferation. Aberrant activation of cap-dependent translation is a hallmark of many cancers including non-small cell lung cancer. The canonical signaling mechanisms leading to translation initiation include activation of the Akt/mTOR pathway in response to the presence of nutrients and growth factors. We have previously observed that inhibition of c-jun N-terminal kinase (JNK) leads to inactivation of cap-dependent translation in mesothelioma cells. Since JNK is involved in the genesis of non-small cell lung cancer (NSCLC), we hypothesized that JNK could also be involved in activating cap-dependent translation in NSCLC cells and could represent an alternative pathway regulating translation. In a series of NSCLC cell lines, inhibition of JNK using SP600125 resulted in inhibition of 4E-BP1 phosphorylation and a decrease in formation of the cap-dependent translation complex, eIF4F. Furthermore, we show that JNK-mediated inhibition of translation is independent of mTOR. Our data provide evidence that JNK is involved in the regulation of translation and has potential as a therapeutic target in NSCLC.


Subject(s)
JNK Mitogen-Activated Protein Kinases/physiology , Protein Biosynthesis , RNA Caps/genetics , Adaptor Proteins, Signal Transducing/metabolism , Anthracenes/pharmacology , Apoptosis , Apoptosis Regulatory Proteins/metabolism , Carcinoma, Non-Small-Cell Lung/genetics , Carcinoma, Non-Small-Cell Lung/metabolism , Cell Cycle Proteins , Cell Line, Tumor , Cell Proliferation , Eukaryotic Initiation Factor-4G/metabolism , Humans , JNK Mitogen-Activated Protein Kinases/antagonists & inhibitors , JNK Mitogen-Activated Protein Kinases/metabolism , Nucleocytoplasmic Transport Proteins/metabolism , Phosphoproteins/metabolism , Phosphorylation , Protein Binding , RNA Caps/metabolism , Sirolimus/pharmacology , TOR Serine-Threonine Kinases/antagonists & inhibitors , TOR Serine-Threonine Kinases/metabolism
3.
Clin Transplant ; 25(4): 541-8, 2011.
Article in English | MEDLINE | ID: mdl-21050273

ABSTRACT

Skin cancers are the most common malignancies in solid organ transplant recipients (SOTR). A case-observational, retrospective study was performed to determine the efficacy of low-dose capecitabine in the secondary prevention of skin cancers in SOTRs treated at a single institution. SOTRs with recurrent squamous cell carcinoma (SCC) and/or basal cell carcinoma (BCC) were given low-dose capecitabine 1 g/m(2) daily, days 1-14 of a 21-d treatment cycle. Skin surveillance was performed by dermatologists every 1-3 months. Cumulative incidence rates of SCC, BCC, and actinic keratosis (AK) before and after treatment were scored and statistically compared for each patient using a non-parametric Wilcoxon signed rank test. Fifteen patients (13 men and two women) with a median age of 57 yr (range 40-73) were treated. Incidence rates as measured by mean number of events per month declined by 0.33 for SCC, 0.04 for BCC, and 2.45 for AK (p < 0.05). The most common grade 3 and 4 toxicities included fatigue (40.0%), hand-foot syndrome (20.0%), and diarrhea (20.0%). The discontinuation rate at one yr was approximately 33.3%. We conclude that oral capecitabine significantly decreases the incidence rates of recurrent SCC, BCC, and AK in SOTRs and is associated with manageable toxicity.


Subject(s)
Antimetabolites, Antineoplastic/therapeutic use , Carcinoma, Basal Cell/prevention & control , Carcinoma, Squamous Cell/prevention & control , Deoxycytidine/analogs & derivatives , Fluorouracil/analogs & derivatives , Organ Transplantation/adverse effects , Skin Neoplasms/prevention & control , Adult , Aged , Capecitabine , Carcinoma, Basal Cell/etiology , Carcinoma, Squamous Cell/etiology , Cohort Studies , Deoxycytidine/therapeutic use , Female , Fluorouracil/therapeutic use , Follow-Up Studies , Humans , Immunocompromised Host , Keratosis, Actinic/etiology , Keratosis, Actinic/prevention & control , Kidney Function Tests , Male , Middle Aged , Retrospective Studies , Risk Factors , Skin Neoplasms/etiology , Treatment Outcome
4.
J Clin Microbiol ; 45(7): 2330-3, 2007 Jul.
Article in English | MEDLINE | ID: mdl-17507517

ABSTRACT

Nocardia asteroides was isolated after prolonged culture from the pericardial fluid of a human immunodeficiency virus-infected patient. The lengthy duration required for culture growth and identification of this N. asteroides isolate affected both initial therapeutic decisions and patient management. A proposed algorithm for the microbiological workup of pericardial fluid for possible Nocardia spp. is described in an effort to improve the timeliness of results.


Subject(s)
HIV Infections/complications , Nocardia Infections/etiology , Nocardia asteroides/isolation & purification , Pericarditis/microbiology , AIDS-Related Opportunistic Infections/diagnosis , AIDS-Related Opportunistic Infections/microbiology , Adult , Anti-Bacterial Agents/therapeutic use , Humans , Male , Nocardia Infections/diagnosis , Nocardia Infections/pathology , Pericarditis/diagnosis , Pericarditis/pathology , Trimethoprim, Sulfamethoxazole Drug Combination/therapeutic use
5.
J Biol Chem ; 279(26): 27807-15, 2004 Jun 25.
Article in English | MEDLINE | ID: mdl-15096503

ABSTRACT

The Ras-extracellular signal-regulated kinase (ERK) cascade is a critical intracellular signaling pathway that regulates growth, survival, and differentiation. Previous work established that Ras-GTP binds to, and facilitates the activation of, the protein kinase Raf-1. Recently, it was demonstrated that the cation diffusion facilitator (CDF) proteins are involved in Ras-ERK signaling by use of a Caenorhabditis elegans genetic screen that identified suppressors of activated Ras. In the current work, we demonstrate that CDF proteins may function downstream of Ras, but upstream of Raf-1 in Xenopus oocytes. We also show that the C. elegans protein CDF-1 and its mammalian homologue ZnT-1 bind to the amino-terminal regulatory portion of Raf-1 and promote the biological and enzymatic activity of Raf-1. Furthermore, we show that Zn(2+) inhibits Raf-1 binding to ZnT-1. We propose a model in which CDF protein binding facilitates Raf-1 activation.


Subject(s)
Caenorhabditis elegans Proteins/physiology , Cation Transport Proteins/physiology , Membrane Proteins/physiology , Proto-Oncogene Proteins c-raf/metabolism , 14-3-3 Proteins , Animals , Caenorhabditis elegans Proteins/chemistry , Caenorhabditis elegans Proteins/genetics , Caenorhabditis elegans Proteins/metabolism , Cation Transport Proteins/chemistry , Cation Transport Proteins/genetics , Cation Transport Proteins/metabolism , Extracellular Space/chemistry , Extracellular Space/metabolism , MAP Kinase Signaling System/physiology , Meiosis/physiology , Membrane Proteins/chemistry , Membrane Proteins/genetics , Membrane Proteins/metabolism , Proto-Oncogene Proteins c-raf/chemistry , Proto-Oncogene Proteins c-raf/genetics , Recombinant Fusion Proteins/chemistry , Recombinant Fusion Proteins/genetics , Recombinant Fusion Proteins/metabolism , Recombinant Fusion Proteins/pharmacology , Tyrosine 3-Monooxygenase/metabolism , Xenopus , Zinc/chemistry , Zinc/pharmacology , ras Proteins/genetics , ras Proteins/metabolism
6.
Dev Cell ; 2(5): 567-78, 2002 May.
Article in English | MEDLINE | ID: mdl-12015965

ABSTRACT

C. elegans cdf-1 was identified in a genetic screen for regulators of Ras-mediated signaling. CDF-1 is a cation diffusion facilitator protein that is structurally and functionally similar to vertebrate ZnT-1. These proteins have an evolutionarily conserved function as positive regulators of the Ras pathway, and the Ras pathway has an evolutionarily conserved ability to respond to CDF proteins. CDF proteins regulate Ras-mediated signaling by promoting Zn(2+) efflux and reducing the concentration of cytosolic Zn(2+), and cytosolic Zn(2+) negatively regulates Ras-mediated signaling. Physiological concentrations of Zn(2+) cause a significant inhibition of Ras-mediated signaling. These findings suggest that Zn(2+) negatively regulates a conserved element of the signaling pathway and that Zn(2+) regulation is important for maintaining the inactive state of the Ras pathway.


Subject(s)
Caenorhabditis elegans Proteins/metabolism , Membrane Proteins/metabolism , Zinc/metabolism , ras Proteins/metabolism , Amino Acid Sequence , Animals , Caenorhabditis elegans/genetics , Caenorhabditis elegans/growth & development , Caenorhabditis elegans/metabolism , Caenorhabditis elegans Proteins/genetics , Conserved Sequence , Female , Gene Expression , Ion Transport , Membrane Proteins/genetics , Molecular Sequence Data , Mutation , Phenotype , Sequence Homology, Amino Acid , Signal Transduction/drug effects , Vulva/growth & development , Zinc/pharmacology
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