ABSTRACT
Introduction: Spillover events of Mycoplasma ovipneumoniae have devastating effects on the wild sheep populations. Multilocus sequence typing (MLST) is used to monitor spillover events and the spread of M. ovipneumoniae between the sheep populations. Most studies involving the typing of M. ovipneumoniae have used Sanger sequencing. However, this technology is time-consuming, expensive, and is not well suited to efficient batch sample processing. Methods: Our study aimed to develop and validate an MLST workflow for typing of M. ovipneumoniae using Nanopore Rapid Barcoding sequencing and multiplex polymerase chain reaction (PCR). We compare the workflow with Nanopore Native Barcoding library preparation and Illumina MiSeq amplicon protocols to determine the most accurate and cost-effective method for sequencing multiplex amplicons. A multiplex PCR was optimized for four housekeeping genes of M. ovipneumoniae using archived DNA samples (N = 68) from nasal swabs. Results: Sequences recovered from Nanopore Rapid Barcoding correctly identified all MLST types with the shortest total workflow time and lowest cost per sample when compared with Nanopore Native Barcoding and Illumina MiSeq methods. Discussion: Our proposed workflow is a convenient and effective method for strain typing of M. ovipneumoniae and can be applied to other bacterial MLST schemes. The workflow is suitable for diagnostic settings, where reduced hands-on time, cost, and multiplexing capabilities are important.
ABSTRACT
Mycoplasma cynos is a primary agent of pneumonia in dogs, and Mycoplasma felis is associated with upper respiratory tract disease in cats. We present complete genome sequences of 26 isolates from clinically affected dogs and cats. These genome sequences will facilitate new molecular and epidemiological analyses.
ABSTRACT
The aim of this study was to determine the differences in the antimicrobial susceptibility profiles of Moraxella bovis, M. bovoculi and M. ovis. Thirty-two strains of Moraxella spp. isolated from cattle and sheep with infectious keratoconjunctivitis were tested via broth microdilution method to determine their susceptibility to ampicillin, cefoperazone, ceftiofur, cloxacillin, enrofloxacin, florfenicol, gentamicin, neomycin, oxytetracycline and penicillin. The results demonstrated that Moraxella spp. strains could be considered sensitive for most of the antimicrobials tested in this study, but differences between the antimicrobial susceptibility profiles of these three Moraxella species were found. M. bovis might differ from other species due to the higher MIC and MBC values it presented.
Subject(s)
Animals , Cattle , Anti-Bacterial Agents/pharmacology , Cattle Diseases/microbiology , Keratoconjunctivitis, Infectious/microbiology , Moraxella/drug effects , Moraxellaceae Infections/veterinary , Sheep Diseases/microbiology , Microbial Sensitivity Tests , Microbial Viability/drug effects , Moraxella/isolation & purification , Moraxellaceae Infections/microbiology , SheepABSTRACT
Records of in vitro susceptibility tests performed between 1992 and 2011 were retrospectively reviewed in order to evaluate the dynamic profiles of possible changes in antimicrobial resistance of Staphylococcus spp. isolated from milk samples of cows with mastitis during two decades. The results of 2,430 isolates tested by disk diffusion technique for susceptibility to oxacillin, penicillin, ampicillin, cephalexin, norfloxacin, tetracycline, sulfazotrim, gentamicin, and neomycin were analysed. Comparisons were performed between the percentages of resistance to antimicrobials and their classes and also between the decades studied. Additionally, the possible tendency or changes in the behaviour of these pathogens against the major drugs used in the last two decades were evaluated using regression analysis. The highest rates of resistance (P<0.0001) were observed for the beta-lactams (34.3%), with exception of cephalexin (6.9%), and for the tetracyclines (28%). Similar resistance rates (7.6% to 15.7%) were observed among the other drugs. Regression analysis showed a reduction in resistance to penicillin and ampicillin throughout the period, whilst for oxacillin and neomycin a decrease in the resistance was observed during the first decade, followed by an increase. A trend towards decreased resistance was found for sulfazotrim, whereas for the other antimicrobials no decrease was observed. The results indicated no trend towards increased resistance for most antimicrobials tested. Nevertheless, it is necessary to monitor the resistance patterns of these pathogens in order to save these drugs as a therapeutic reserve.
Os registros de resultados de testes de suscetibilidade in vitro realizados no período de 1992 a 2011 foram revisados, retrospectivamente, a fim de avaliar a dinâmica de possíveis mudanças dos perfis de resistência de isolados de Staphylococcus spp., oriundos de amostras de leite de vacas com mastite ao longo do tempo. Os resultados de 2430 isolados testados pela técnica de difusão em disco para oxacilina, penicilina, ampicilina, cefalexina, norfloxacina, tetraciclina, sulfazotrim, gentamicina e neomicina foram analisados. Comparações entre as médias de resistência para os antimicrobianos e suas respectivas classes e em relação ao período analisado foram estabelecidas. O comportamento da resistência para cada antimicrobiano foi avaliado por meio de análise de regressão. As maiores taxas de resistência (P<0,0001) foram observadas para os betalactâmicos (34,3%), com exceção da cefalexina (6,9%), e tetraciclina (28%). Frente aos demais fármacos, os isolados apresentaram médias de resistência semelhantes entre si (de 7,6% a 15,7%). A análise de regressão demonstrou redução da resistência para penicilina e ampicilina ao longo do período analisado. Para a oxacilina e a neomicina, houve um decréscimo da resistência dos micro-organismos testados durante a primeira década; entretanto, houve um aumento no segundo período. Em relação ao sulfazotrim, foi verificada uma tendência à diminuição da resistência dos isolados, ao passo que, para os demais antimicrobianos, nenhum comportamento foi destacado. Os resultados não indicaram tendência de aumento da resistência dos isolados de Staphylococcus spp. para a maioria dos antimicrobianos testados. Contudo, é necessário monitorar os padrões de resistência destes patógenos, a fim de que estes fármacos sejam preservados para garantir uma reserva terapêutica.
ABSTRACT
Foram obtidas 154 amostras de lesões cutâneas de cães com pioderma superficial atendidos no Serviço de Dermatologia Veterinária do Hospital Veterinário Universitário (HVU) da Universidade Federal de Santa Maria (UFSM), com o objetivo de determinar a suscetibilidade antimicrobiana de isolados de Staphylococcus spp. e avaliar a presença de multirresistência. Após isolamento e identificação, as cepas foram submetidas ao teste de sensibilidade aos antimicrobianos, cujos resultados evidenciaram menores percentuais de resistência à associação amoxicilina e ácido clavulânico (1,9 por cento), cefadroxil (1,9 por cento), cefalexina (1,9 por cento) e vancomicina (0,6 por cento). Os maiores percentuais de resistência foram frente à amoxicilina (60,4 por cento) e penicilina G (60,4 por cento). A multirresistência foi detectada em 23,4 por cento e a resistência à meticilina em 5,8 por cento das amostras. Pode-se concluir que os isolados de Staphylococcus spp. apresentam elevada suscetibilidade aos antimicrobianos comumente utilizados no tratamento dos piodermas superficiais em cães atendidos no HVU-UFSM, como a cefalexina e a amoxicilina associada ao ácido clavulânico, confirmando a eleição desses fármacos para o tratamento de cães com esta afecção. A suscetibilidade diminuída das cepas frente às fluoroquinolonas, também recomendadas pela literatura para o tratamento de pioderma, permite sugerir que estes fármacos não devem mais ser considerados na seleção empírica. A identificação de Staphylococcus spp. multirresistentes na população canina estudada justifica análises bacteriológicas periódicas e regionais de lesões cutâneas de cães com pioderma superficial, a fim de minimizar a seleção de bactérias resistentes, possíveis falhas terapêuticas e também motiva a antimicrobianoterapia prudente.
A total of 154 samples of skin lesions were obtained from dogs with superficial pyoderma that were assisted by the Veterinary Dermatology Service at the University Veterinary Hospital (HVU), Universidade Federal de Santa Maria (UFSM), aiming to determine the antimicrobial susceptibility of Staphylococcus spp. isolates and evaluate the presence of multidrug resistance profile. After bacterial isolation and identification, the strains were tested for antimicrobial susceptibility, and the results showed lower percentages of resistance to the amoxicillin and clavulanic acid association (1.9 percent), cefadroxil (1.9 percent), cephalexin (1.9 percent) and vancomycin (0.6 percent). The highest percentages were towards amoxicillin (60.4 percent) and penicillin G (60.4 percent). The multidrug resistance was detected in 23.4 percent and the methicillin resistance in 5.8 percent of the samples. It may be concluded that the Staphylococcus spp. isolates present high susceptibility to key antimicrobials used in the treatment of superficial pyodermas in dogs at the HVU-UFSM, such as cephalexin and the amoxicillin and clavulanic acid association, confirming the preference for these drugs when treating dogs with this disorder. The susceptibility of the strains to fluoroquinolones, also recommended in the literature for the treatment of pyodermas, allows suggesting that such drugs should not be considered in the empirical selection. The identification of multidrug-resistant Staphylococcus spp. in the studied canine population justifies periodic and regional bacteriological tests of skin lesions in dogs with superficial pyoderma, possible therapeutic failures and also motivates wise use of antimicrobial therapy.
Subject(s)
Animals , Dogs , Dogs/microbiology , Drug Resistance, Microbial , Staphylococcal Skin Infections/veterinary , Pyoderma/veterinary , Staphylococcus , Staphylococcus/isolation & purification , Microbial Sensitivity Tests/veterinary , Cefadroxil , Cephalexin , Amoxicillin-Potassium Clavulanate Combination , Penicillin G , VancomycinABSTRACT
A discutida questão da substituição do uso de antibacterianos em rações (promotores de crescimento) requer urgentes alternativas. Face às necessidades de inibidores microbianos nesses alimentos, os óleos essenciais (OES) se constituem em alternativa, sob avaliação. Neste estudo, avaliou-se a atividade antimicrobiana dos OES de Origanum vulgare (orégano), Thymus vulgaris (tomilho), Cinnamomum zeylanicum (canela), Lippia graveolens (orégano mexicano), Zingiber officinale (gengibre), Salvia officinalis (sálvia), Rosmarinus officinalis (alecrim) e Ocimum basilicum (manjericão) frente a amostras de Escherichia coli isoladas de fezes de aves (n=43) e de bovinos (n=36). A concentração inibitória mínima (CIM) e a concentração bactericida mínima (CBM) foram determinadas para cada isolado através da técnica de microdiluição em caldo, a partir da máxima concentração de 6400µg mL-1 de cada OE testado. Observou-se atividade antimicrobiana para os OES de orégano, orégano mexicano, tomilho, canela. Para todas as amostras testadas, independente de sua origem, os OES mais e menos efetivos quanto à atividade antimicrobiana foram o orégano e a canela, respectivamente. Esses resultados confirmaram o potencial antibacteriano de alguns OES, os quais merecem novas investigações abordando sua adição na alimentação de aves e bovinos.
The discussed issue about replacing the use of antibiotics in animal feed (growth promoters) requires emerging alternatives. To meet the needs of microbial inhibitors in these foods, the essentials oils (EOS) constitute potential alternatives under evaluation. In this study it was evaluated the antimicrobial activities of EOs from Oreganum vulgare (oregano), Thymus vulgaris (thyme), Lippia graveolens (Mexican oregano), Cinnamomum zeylanicum (cinnamon), Zingiber officinale (ginger), Salvia officinalis (sage), Rosmarinus officinalis (rosemary) and Ocimum basilicum (basil) against Escherichia coli strains isolated from poultry (n=43) and cattle faeces (n=36). The minimum inhibitory concentration (MIC) and minimum bactericidal concentration (MBC) were determined for each isolate by using the broth microdilution technique, from the maximum concentration of 6400µg mL-1 of each OE tested. Antimicrobial activity was observed on the essential oils of oregano, mexican oregano, thymus and cinnamon. For all strains tested, regardless of their origin, the OES more and less effective as antimicrobial activity were oregano and cinnamon, respectively. These results confirm the antimicrobial potential of some EOs, which deserve further research, addressing the addition of essential oils in poultry and cattle feeding.