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FEBS Lett ; 579(11): 2451-7, 2005 Apr 25.
Article in English | MEDLINE | ID: mdl-15848187

ABSTRACT

Southern analysis showed that Gr-EXPB1, a functional expansin from the potato cyst nematode Globodera rostochiensis, is member of a multigene family, and EST data suggest expansins to be present in other plant parasitic nematodes as well. Homology modeling predicted that Gr-EXPB1 domain 1 (D1) has a flat beta-barrel structure with surface-exposed aromatic rings, whereas the 3D structure of Gr-EXPB1-D2 was remarkably similar to plant expansins. Gr-EXPB1 shows highest sequence similarity to two extracellular proteins from saprophytic soil-inhabiting Actinobacteria, and includes a bacterial type II carbohydrate-binding module. These results support the hypothesis that a number of pathogenicity factors of cyst nematodes is of procaryotic origin and were acquired by horizontal gene transfer.


Subject(s)
Helminth Proteins/chemistry , Helminth Proteins/metabolism , Models, Molecular , Solanum tuberosum/parasitology , Tylenchida/chemistry , Tylenchida/genetics , Amino Acid Sequence , Animals , Blotting, Southern , DNA, Complementary/genetics , Evolution, Molecular , Genome , Helminth Proteins/genetics , Molecular Sequence Data , Protein Structure, Tertiary , Sequence Alignment , Nicotiana/genetics
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