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1.
Phys Rev E ; 99(2-1): 022604, 2019 Feb.
Article in English | MEDLINE | ID: mdl-30934321

ABSTRACT

We study the regimes of a diluted dipolar system through Monte Carlo numerical simulations in the NVT ensemble. To accelerate the dynamics, several approximations and speed-up algorithms are proposed and tested. In particular, it turns out that "cluster move Monte Carlo" algorithm speeds-up to two decades faster than the traditional Monte Carlo, depending on temperature and density. We find simple-fluid, chain-fluid, ring-fluid, gel, and antiparallel columnar regimes, which are studied and characterized through positional, orientational, and thermodynamical observables.

2.
Biomicrofluidics ; 9(2): 024122, 2015 Mar.
Article in English | MEDLINE | ID: mdl-26015834

ABSTRACT

Many self-propelled microorganisms are attracted to surfaces. This makes their dynamics in restricted geometries very different from that observed in the bulk. Swimming along walls is beneficial for directing and sorting cells, but may be detrimental if homogeneous populations are desired, such as in counting microchambers. In this work, we characterize the motion of human sperm cells ∼60 µm long, strongly confined to ∼25 µm shallow chambers. We investigate the nature of the cell trajectories between the confining surfaces and their accumulation near the borders. Observed cell trajectories are composed of a succession of quasi-circular and quasi-linear segments. This suggests that the cells follow a path of intermittent trappings near the top and bottom surfaces separated by stretches of quasi-free motion in between the two surfaces, as confirmed by depth resolved confocal microscopy studies. We show that the introduction of artificial petal-shaped corrugation in the lateral boundaries removes the tendency of cells to accumulate near the borders, an effect which we hypothesize may be valuable for microfluidic applications in biomedicine.

3.
Article in English | MEDLINE | ID: mdl-24730887

ABSTRACT

The guidance of human sperm cells under confinement in quasi-2D microchambers is investigated using a purely physical method to control their distribution. Transport property measurements and simulations are performed with diluted sperm populations, for which effects of geometrical guidance and concentration are studied in detail. In particular, a trapping transition at convex angular wall features is identified and analyzed. We also show that highly efficient microratchets can be fabricated by using curved asymmetric obstacles to take advantage of the spermatozoa specific swimming strategy.


Subject(s)
Cell Aggregation/physiology , Cell Separation/methods , Models, Biological , Sperm Motility/physiology , Spermatozoa/cytology , Spermatozoa/physiology , Cells, Cultured , Computer Simulation , Humans , Male
4.
Article in English | MEDLINE | ID: mdl-23767561

ABSTRACT

It has been shown that a nanoliter chamber separated by a wall of asymmetric obstacles can lead to an inhomogeneous distribution of self-propelled microorganisms. Although it is well established that this rectification effect arises from the interaction between the swimmers and the noncentrosymmetric pillars, here we demonstrate numerically that its efficiency is strongly dependent on the detailed dynamics of the individual microorganism. In particular, for the case of run-and-tumble dynamics, the distribution of run lengths, the rotational diffusion, and the partial preservation of run orientation memory through a tumble are important factors when computing the rectification efficiency. In addition, we optimize the geometrical dimensions of the asymmetric pillars in order to maximize the swimmer concentration and we illustrate how it can be used for sorting by swimming strategy in a long array of parallel obstacles.


Subject(s)
Cell Communication/physiology , Cell Movement/physiology , Escherichia coli/physiology , Models, Biological , Computer Simulation
5.
Phys Rev Lett ; 87(1): 017004, 2001 Jul 02.
Article in English | MEDLINE | ID: mdl-11461488

ABSTRACT

We study the effect of thermal fluctuations in a fully frustrated Josephson junction array driven by a current I larger than the apparent critical current I(c)(T). We calculate numerically the behavior of the chiral order parameter of Z2 symmetry and the transverse helicity modulus [related to the U(1) symmetry] as a function of temperature. We find that the Z2 transition occurs at a temperature T(Z2)(I) which is lower than the temperature T(U(1))(I) for the U(1) transition. Both transitions could be observed experimentally from measurements of the longitudinal and transverse voltages.

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