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Genet Mol Res ; 12(2): 1061-73, 2013 Apr 10.
Article in English | MEDLINE | ID: mdl-23661432

ABSTRACT

Expansins are cell wall-associated proteins that induce wall extension and relax stress by disrupting noncovalent bonds between cellulose microfibrils and cross-linking glycan chains, thereby promoting wall creep. Anthocephalus chinensis is a very fast-growing economically important tree found mainly in South Asia. Sixteen cDNAs, designated AcEXPA1 to AcEXPA16 (GenBank accession Nos. FJ417847, JF922686-JF922700) with corresponding genomic DNA sequences (GenBank accession Nos. GQ228823, JF922701-JF922715), were isolated by amplifying conserved domain binding with genomic walking and RACE techniques from four differential growth tissues in A. chinensis. These α-expansin homologues were highly conserved in size and sequence; they had the same sequence structures as an N-terminal signal peptide, three exons and two introns. Their amino acid alignment showed that A. chinensis expansin genes are divided into three subgroups: A, B and C. This study is the first report on expansin genes from A. chinensis. It will be used for a tissue-specific expression model and for studying the relationship between expansin genes, growth rate and wood quality of the xylem in this fast-growing tree.


Subject(s)
Pregnancy Proteins/genetics , Rubiaceae/genetics , Trees/genetics , Amino Acid Sequence , Base Sequence , DNA, Complementary/chemistry , DNA, Complementary/genetics , Gene Order , Molecular Sequence Data , Open Reading Frames , Phylogeny , Pregnancy Proteins/chemistry , Pregnancy Proteins/classification , Sequence Alignment
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