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2.
BMC Med Res Methodol ; 22(1): 229, 2022 08 16.
Article En | MEDLINE | ID: mdl-35971088

An increasing number of large-scale multi-modal research initiatives has been conducted in the typically developing population, e.g. Dev. Cogn. Neur. 32:43-54, 2018; PLoS Med. 12(3):e1001779, 2015; Elam and Van Essen, Enc. Comp. Neur., 2013, as well as in psychiatric cohorts, e.g. Trans. Psych. 10(1):100, 2020; Mol. Psych. 19:659-667, 2014; Mol. Aut. 8:24, 2017; Eur. Child and Adol. Psych. 24(3):265-281, 2015. Missing data is a common problem in such datasets due to the difficulty of assessing multiple measures on a large number of participants. The consequences of missing data accumulate when researchers aim to integrate relationships across multiple measures. Here we aim to evaluate different imputation strategies to fill in missing values in clinical data from a large (total N = 764) and deeply phenotyped (i.e. range of clinical and cognitive instruments administered) sample of N = 453 autistic individuals and N = 311 control individuals recruited as part of the EU-AIMS Longitudinal European Autism Project (LEAP) consortium. In particular, we consider a total of 160 clinical measures divided in 15 overlapping subsets of participants. We use two simple but common univariate strategies-mean and median imputation-as well as a Round Robin regression approach involving four independent multivariate regression models including Bayesian Ridge regression, as well as several non-linear models: Decision Trees (Extra Trees., and Nearest Neighbours regression. We evaluate the models using the traditional mean square error towards removed available data, and also consider the Kullback-Leibler divergence between the observed and the imputed distributions. We show that all of the multivariate approaches tested provide a substantial improvement compared to typical univariate approaches. Further, our analyses reveal that across all 15 data-subsets tested, an Extra Trees regression approach provided the best global results. This not only allows the selection of a unique model to impute missing data for the LEAP project and delivers a fixed set of imputed clinical data to be used by researchers working with the LEAP dataset in the future, but provides more general guidelines for data imputation in large scale epidemiological studies.


Autistic Disorder , Autistic Disorder/genetics , Bayes Theorem , Child , Data Collection/methods , Humans
3.
Front Genet ; 13: 852165, 2022.
Article En | MEDLINE | ID: mdl-35677560

This study examined the impact of rearing temperature (10.5, 13.5 or 16.5°C) on the hepatic transcriptome of AquAdvantage Salmon (growth hormone transgenic female triploid Atlantic salmon) at an average weight of 800 g. Six stranded PE libraries were Illumina-sequenced from each temperature group, resulting in an average of over 100 M raw reads per individual fish. RNA-sequencing (RNA-seq) results showed the greatest difference in the number of differentially expressed transcripts (1750 DETs), as revealed by both DESeq2 and edgeR (q < 0.05; fold-change > |1.5|), was between the 10.5 and 16.5°C temperature groups. In contrast, 172 and 52 DETs were found in the 10.5 vs. 13.5°C and the 13.5 vs. 16.5°C comparisons, respectively. Considering the DETs between the 10.5 and 16.5°C groups, 282 enriched gene ontology (GO) terms were identified (q < 0.05), including "response to stress", "immune system process", "lipid metabolic process", "oxidation-reduction process", and "cholesterol metabolic process", suggesting elevated temperature elicited broad effects on multiple biological systems. Pathway analysis using ClueGO showed additional impacts on amino acid and lipid metabolism. There was a significant positive correlation between RNA-seq and real-time quantitative polymerase chain reaction (RT-qPCR) results for 8 of 9 metabolic-related transcripts tested. RT-qPCR results also correlated to changes in fillet tissue composition previously reported in these salmon (e.g., methionine and lysine concentrations positively correlated with hsp90ab1 transcript expression), suggesting that rearing temperature played a significant role in mediating metabolic/biosynthetic pathways of AquAdvantage Salmon. Many transcripts related to lipid/fatty acid metabolism (e.g., elovl2, fabpi, hacd2, mgll, s27a2, thrsp) were downregulated at 16.5°C compared to both other temperature groups. Additionally, enrichment of stress-, apoptosis- and catabolism-relevant GO terms at 16.5°C suggests that this temperature may not be ideal for commercial production when using freshwater recirculating aquaculture systems (RAS). This study relates phenotypic responses to transcript-specific findings and therefore aids in the determination of an optimal rearing temperature for AquAdvantage Salmon. With approval to grow and sell AquAdvantage Salmon in the United States and Canada, the novel insights provided by this research can help industry expansion by promoting optimal physiological performance and health.

4.
Res Dev Disabil ; 122: 104167, 2022 Mar.
Article En | MEDLINE | ID: mdl-34998116

BACKGROUND: There is a lack of autism screening instruments for deaf or hard of hearing (DHH) adults with intellectual disability. AIMS: This study examined the diagnostic validity of the Pervasive Developmental Disorder in Mental Retardation Scale and the Diagnostic Behavioral Assessment for autism spectrum disorder - Revised in this rare population. METHODS AND PARTICIPANTS: 56 DHH adults with intellectual disability living in three specialized therapeutic communities were examined, 9 of whom met criteria for autism. OUTCOMES AND RESULTS: With minimal adaptions regarding item interpretation, both tools showed good diagnostic and high convergent validity. Items probing for difficulties in reciprocal social interaction and restricted interests were discriminant between individuals with and without autism. CONCLUSION: These data suggest that both autism screening tools are feasible and psychometrically sound when used with appropriate adaptations for DHH adults with intellectual disability.


Autism Spectrum Disorder , Autistic Disorder , Intellectual Disability , Adult , Autism Spectrum Disorder/complications , Autism Spectrum Disorder/diagnosis , Autistic Disorder/complications , Autistic Disorder/diagnosis , Feasibility Studies , Humans , Intellectual Disability/complications , Intellectual Disability/diagnosis , Mass Screening
5.
Article En | MEDLINE | ID: mdl-34995773

Atlantic salmon is an important aquaculture species farmed in ocean net-pens and therefore subjected to changing environmental conditions, including rising temperatures. This creates a need for research on the thermal tolerance of this species for the future of sustainable aquaculture. We investigated the thermal tolerance of individually tagged Atlantic salmon post-smolts subjected sequentially to two common high-temperature challenges: critical thermal maximum (CTmax) followed by incremental thermal maximum (ITmax). Our goals were (1) to determine whether CTmax can predict ITmax for individual fish, and (2) to examine connections between various body size (mass, length, condition factor), cardiac (absolute and relative ventricle mass) and blood (hematocrit) metrics and thermal tolerance. We found no relationship between CTmax and ITmax. This is of concern because CTmax, which is a quick and easy test, is often used to predict upper lethal limits in fish despite not using real-world rates of temperature increase and not using death as the experimental endpoint (unlike ITmax). Also, some metrics which correlated in one direction with CTmax had the opposite correlation with ITmax. For instance, smaller fish or fish with smaller ventricles had a higher CTmax but a lower ITmax than larger fish or fish with larger ventricles. Taken together, these results highlight the need to take care when using acute thermal tolerance tests to predict real-world responses to rising temperatures.


Salmo salar , Animals , Aquaculture , Body Size , Hot Temperature , Temperature
6.
Article En | MEDLINE | ID: mdl-34718146

Rising temperature leads to reduced oxygen solubility and therefore increases the risk of exposure to harmful hypoxic condition for fish in their natural aquatic environments and in aquaculture. The goal of this study was to determine whether acclimation to warmer temperature can improve high-temperature hypoxia tolerance in fish, using sibling diploid and triploid brook charr as the experimental model. Triploid fish are used for aquaculture and fisheries management because they are sterile, but they are known to have reduced thermal and hypoxia tolerance compared to conventional diploids. Fish were pre-acclimated to either 15 °C (optimum temperature for diploids) or 18 °C and then assessed for high-temperature hypoxia tolerance by rapidly increasing temperature to pre-determined levels (up to 30 °C), holding fish at these temperatures for one hour, and then using compressed nitrogen to drive oxygen out of the water. Hypoxia tolerance was expressed as both the oxygen tension at loss of equilibrium and the time taken to reach this endpoint following the start of the trial. Acclimation to 18 °C improved hypoxia tolerance at high temperatures but this advantage was lost after reacclimation to 15 °C. Although 18 °C acclimation improved the hypoxia tolerance of triploids, it remained inferior to that of diploids under identical test conditions. Somatic energy reserves (estimated as condition factor and hepatosomatic index), cardiac output (relative ventricular mass) and oxygen carrying capacity of the blood (hemoglobin concentration and hematocrit) did not markedly affect high-temperature hypoxia tolerance.


Acclimatization/genetics , Acclimatization/physiology , Fish Diseases/genetics , Fish Diseases/physiopathology , Hypoxia/veterinary , Trout/genetics , Trout/physiology , Animals , Aquaculture , Diploidy , Female , Fish Diseases/blood , Fisheries , Hypoxia/genetics , Hypoxia/physiopathology , Linear Models , Male , Models, Biological , Temperature , Triploidy , Trout/blood
7.
Mol Autism ; 12(1): 74, 2021 12 15.
Article En | MEDLINE | ID: mdl-34911565

BACKGROUND: The neurocognitive mechanisms underlying autism spectrum disorder (ASD) remain unclear. Progress has been largely hampered by small sample sizes, variable age ranges and resulting inconsistent findings. There is a pressing need for large definitive studies to delineate the nature and extent of key case/control differences to direct research towards fruitful areas for future investigation. Here we focus on perception of biological motion, a promising index of social brain function which may be altered in ASD. In a large sample ranging from childhood to adulthood, we assess whether biological motion preference differs in ASD compared to neurotypical participants (NT), how differences are modulated by age and sex and whether they are associated with dimensional variation in concurrent or later symptomatology. METHODS: Eye-tracking data were collected from 486 6-to-30-year-old autistic (N = 282) and non-autistic control (N = 204) participants whilst they viewed 28 trials pairing biological (BM) and control (non-biological, CTRL) motion. Preference for the biological motion stimulus was calculated as (1) proportion looking time difference (BM-CTRL) and (2) peak look duration difference (BM-CTRL). RESULTS: The ASD group showed a present but weaker preference for biological motion than the NT group. The nature of the control stimulus modulated preference for biological motion in both groups. Biological motion preference did not vary with age, gender, or concurrent or prospective social communicative skill within the ASD group, although a lack of clear preference for either stimulus was associated with higher social-communicative symptoms at baseline. LIMITATIONS: The paired visual preference we used may underestimate preference for a stimulus in younger and lower IQ individuals. Our ASD group had a lower average IQ by approximately seven points. 18% of our sample was not analysed for various technical and behavioural reasons. CONCLUSIONS: Biological motion preference elicits small-to-medium-sized case-control effects, but individual differences do not strongly relate to core social autism associated symptomatology. We interpret this as an autistic difference (as opposed to a deficit) likely manifest in social brain regions. The extent to which this is an innate difference present from birth and central to the autistic phenotype, or the consequence of a life lived with ASD, is unclear.


Autism Spectrum Disorder , Autistic Disorder , Adolescent , Biomarkers , Case-Control Studies , Child , Humans , Severity of Illness Index , Young Adult
8.
J Exp Zool B Mol Dev Evol ; 336(6): 496-510, 2021 09.
Article En | MEDLINE | ID: mdl-34254444

Ploidy transitions through whole genome duplication have shaped evolution by allowing the sub- and neo-functionalization of redundant copies of highly conserved genes to express novel traits. The nuclear:cytoplasmic (n:c) ratio is maintained in polyploid vertebrates resulting in larger cells, but body size is maintained by a concomitant reduction in cell number. Ploidy can be manipulated easily in most teleosts, and the zebrafish, already well established as a model system for biomedical research, is therefore an excellent system in which to study the effects of increased cell size and reduced cell numbers in polyploids on development and physiology. Here we describe a novel technique using confocal microscopy to measure genome size and determine ploidy non-lethally at 48 h post-fertilization (hpf) in transgenic zebrafish expressing fluorescent histones. Volumetric analysis of myofiber nuclei using open-source software can reliably distinguish diploids and triploids from a mixed-ploidy pool of embryos for subsequent experimentation. We present an example of this by comparing heart rate between confirmed diploid and triploid embryos at 54 hpf.


Ploidies , Zebrafish/embryology , Zebrafish/genetics , Animals , Animals, Genetically Modified , Cell Size , Genome Size , Microscopy, Confocal , Muscles/cytology
9.
Mol Autism ; 11(1): 67, 2020 08 31.
Article En | MEDLINE | ID: mdl-32867850

BACKGROUND: Heterogeneity in the phenotypic presentation of autism spectrum disorder (ASD) is apparent in the profile and the severity of sensory features. Here, we applied factor mixture modelling (FMM) to test a multidimensional factor model of sensory processing in ASD. We aimed to identify homogeneous sensory subgroups in ASD that differ intrinsically in their severity along continuous factor scores. We also investigated sensory subgroups in relation to clinical variables: sex, age, IQ, social-communication symptoms, restricted and repetitive behaviours, adaptive functioning and symptoms of anxiety and attention-deficit/hyperactivity disorder. METHODS: Three hundred thirty-two children and adults with ASD between the ages of 6 and 30 years with IQs varying between 40 and 148 were included. First, three different confirmatory factor models were fit to the 38 items of the Short Sensory Profile (SSP). Then, latent class models (with two-to-six subgroups) were evaluated. The best performing factor model, the 7-factor structure, was subsequently used in two FMMs that varied in the number of subgroups: a two-subgroup, seven-factor model and a three-subgroup and seven-factor model. RESULTS: The 'three-subgroup/seven-factor' FMM was superior to all other models based on different fit criteria. Identified subgroups differed in sensory severity from severe, moderate to low. Accounting for the potential confounding effects of age and IQ, participants in these sensory subgroups had different levels of social-communicative symptoms, restricted and repetitive behaviours, adaptive functioning skills and symptoms of inattention and anxiety. LIMITATIONS: Results were derived using a single parent-report measure of sensory features, the SSP, which limits the generalisability of findings. CONCLUSION: Sensory features can be best described by three homogeneous sensory subgroups that differ in sensory severity gradients along seven continuous factor scores. Identified sensory subgroups were further differentiated by the severity of core and co-occurring symptoms, and level of adaptive functioning, providing novel evidence on the associated clinical correlates of sensory subgroups. These sensory subgroups provide a platform to further interrogate the neurobiological and genetic correlates of altered sensory processing in ASD.


Autism Spectrum Disorder/pathology , Autism Spectrum Disorder/physiopathology , Models, Biological , Sensation , Adolescent , Adult , Child , Female , Humans , Male , Multivariate Analysis , Phenotype , Regression Analysis , Young Adult
10.
J Dev Biol ; 8(1)2020 Jan 31.
Article En | MEDLINE | ID: mdl-32023839

Hypoxia induces precocious hatching in zebrafish, but we do not have a clear understanding of the molecular mechanisms regulating the activation of the hatching enzyme or how these mechanisms trigger precocious hatching under unfavorable environmental conditions. Using immunohistochemistry, pharmacological inhibition of matrix metalloproteinase 13 (Mmp13), and in vivo zymography, we show that Mmp13a is present in the hatching gland just as embryos become hatching competent and that Mmp13a activity is required for both normal hatching and hypoxia-induced precocious hatching. We conclude that Mmp13a likely functions in activating the hatching enzyme zymogen and that Mmp13a activity is necessary but not sufficient for hatching in zebrafish. This study highlights the broad nature of MMP function in development and provides a non-mammalian example of extra-embryonic processes mediated by MMP activity.

11.
Fish Shellfish Immunol ; 97: 656-668, 2020 Feb.
Article En | MEDLINE | ID: mdl-31891812

AquAdvantage Salmon (growth hormone transgenic female triploid Atlantic salmon) are a faster-growing alternative to conventional farmed diploid Atlantic salmon. To investigate optimal rearing conditions for their commercial production, a laboratory study was conducted in a freshwater recirculating aquaculture system (RAS) to examine the effect of rearing temperature (10.5 °C, 13.5 °C, 16.5 °C) on their antiviral immune and stress responses. When each temperature treatment group reached an average weight of 800 g, a subset of fish were intraperitoneally injected with either polyriboinosinic polyribocytidylic acid (pIC, a viral mimic) or an equal volume of sterile phosphate-buffered saline (PBS). Blood and head kidney samples were collected before injection and 6, 24 and 48 h post-injection (hpi). Transcript abundance of 7 antiviral biomarker genes (tlr3, lgp2, stat1b, isg15a, rsad2, mxb, ifng) was measured by real-time quantitative polymerase chain reaction (qPCR) on head kidney RNA samples. Plasma cortisol levels from blood samples collected pre-injection and from pIC and PBS groups at 24 hpi were quantified by ELISA. While rearing temperature and treatment did not significantly affect circulating cortisol, all genes tested were significantly upregulated by pIC at all three temperatures (except for tlr3, which was only upregulated in the 10.5 °C treatment). Target gene activation was generally observed at 24 hpi, with most transcript levels decreasing by 48 hpi in pIC-injected fish. Although a high amount of biological variability in response to pIC was evident across all treatments, rearing temperature significantly influenced transcript abundance and/or fold-changes comparing time- and temperature-matched pIC- and PBS-injected fish for several genes (tlr3, lgp2, stat1b, isg15a, rsad2 and ifng) at 24 hpi. As an example, significantly higher fold-changes of rsad2, isg15a and ifng were found in fish reared at 10.5 °C when compared to 16.5 °C. Multivariate analysis confirmed that rearing temperature modulated antiviral immune response. The present experiment provides novel insight into the relationship between rearing temperature and innate antiviral immune response in AquAdvantage Salmon.


Growth Hormone/immunology , Immunity, Innate , Salmo salar/immunology , Temperature , Triploidy , Animals , Animals, Genetically Modified/genetics , Animals, Genetically Modified/immunology , Aquaculture/methods , Female , Gene Expression/immunology , Growth Hormone/genetics , Interferon Inducers/administration & dosage , Interferon Inducers/immunology , Poly I-C/administration & dosage , Poly I-C/immunology , Salmo salar/genetics , Stress, Physiological/drug effects , Virus Diseases/immunology , Virus Diseases/veterinary
13.
Physiol Biochem Zool ; 91(6): 1091-1101, 2018.
Article En | MEDLINE | ID: mdl-30285539

Polyploidy is an important driver of evolutionary change (generally via tetraploidy) and also serves a practical role in aquaculture and fisheries management (via triploidy). Fundamental changes in cell size and number that accompany polyploidy are predicted to affect cellular and whole-animal physiology due to constraints placed on surface-mediated processes at the cellular level, potentially altering environmental tolerances and optima. The aim of this study was to determine whether the documented reduction in thermal tolerance of aquatic polyploids is a result of their being less hypoxia tolerant. This was assessed by holding diploid and triploid rainbow trout for 1 h above their thermal optima in separate trials at eight temperatures between 20° and 27°C and then rapidly reducing the oxygen tension (Po2) of the water and determining the nonlethal Po2 at which fish lost equilibrium. As expected, there was a highly significant ([Formula: see text]) effect of temperature on Po2 at loss of equilibrium. Although there was also a significant ([Formula: see text]) effect of ploidy on Po2 at loss of equilibrium, with triploid values higher than diploid, post hoc analyses showed no significant effect of ploidy at any specific temperature. Oxygen availability alone therefore does not appear to play a major role in determining the thermal tolerance of polyploids.


Hot Temperature , Oncorhynchus mykiss/physiology , Oxygen/metabolism , Ploidies , Anaerobiosis , Animals , Fisheries , Oncorhynchus mykiss/genetics
14.
J Autism Dev Disord ; 48(7): 2490-2505, 2018 07.
Article En | MEDLINE | ID: mdl-29468576

Research on sex-related differences in Autism Spectrum Disorder (ASD) has been impeded by small samples. We pooled 28 datasets from 18 sites across nine European countries to examine sex differences in the ASD phenotype on the ADI-R (376 females, 1763 males) and ADOS (233 females, 1187 males). On the ADI-R, early childhood restricted and repetitive behaviours were lower in females than males, alongside comparable levels of social interaction and communication difficulties in females and males. Current ADI-R and ADOS scores showed no sex differences for ASD severity. There were lower socio-communicative symptoms in older compared to younger individuals. This large European ASD sample adds to the literature on sex and age variations of ASD symptomatology.


Autism Spectrum Disorder/epidemiology , Adolescent , Adult , Age Factors , Autism Spectrum Disorder/diagnosis , Child , Child, Preschool , Female , Humans , Infant , Interpersonal Relations , Male , Phenotype , Sex Characteristics
15.
Autism Res ; 11(2): 270-283, 2018 02.
Article En | MEDLINE | ID: mdl-28941213

Autism Spectrum Disorder (ASD) is associated with persistent impairments in adaptive abilities across multiple domains. These social, personal, and communicative impairments become increasingly pronounced with development, and are present regardless of IQ. The Vineland Adaptive Behavior Scales, Second Edition (Vineland-II) is the most commonly used instrument for quantifying these impairments, but minimal clinically important differences (MCIDs) on Vineland-II scores have not been rigorously established in ASD. We pooled data from several consortia/registries (EU-AIMS LEAP study, ABIDE-I, ABIDE-II, INFOR, Simons Simplex Collection and Autism Treatment Network [ATN]) and clinical investigations and trials (Stanford, Yale, Roche) resulting in a data set of over 9,000 individuals with ASD. Two approaches were used to estimate MCIDs: distribution-based methods and anchor-based methods. Distribution-based MCID [d-MCID] estimates included the standard error of the measurement, as well as one-fifth and one-half of the covariate-adjusted standard deviation (both cross-sectionally and longitudinally). Anchor-based MCID [a-MCID] estimates include the slope of linear regression of clinician ratings of severity on the Vineland-II score, the slope of linear regression of clinician ratings of longitudinal improvement category on Vineland-II change, the Vineland-II change score maximally differentiating clinical impressions of minimal versus no improvement, and equipercentile equating. Across strata, the Vineland-II Adaptive Behavior Composite standardized score MCID estimates range from 2.01 to 3.2 for distribution-based methods, and from 2.42 to 3.75 for sample-size-weighted anchor-based methods. Lower Vineland-II standardized score MCID estimates were observed for younger and more cognitively impaired populations. These MCID estimates enable users of Vineland-II to assess both the statistical and clinical significance of any observed change. Autism Res 2018, 11: 270-283. © 2017 International Society for Autism Research, Wiley Periodicals, Inc. LAY SUMMARY: The Vineland Adaptive Behavior Scales (2nd edition; Vineland-II) is the most widely used scale for assessing day-to-day "adaptive" skills. Yet, it is unknown how much Vineland-II scores must change for those changes to be regarded as clinically significant. We pooled data from over 9,000 individuals with ASD to show that changes of 2-3.75 points on the Vineland-II Composite score represent the "minimal clinically-important difference." These estimates will help evaluate the benefits of potential new treatments for ASD.


Adaptation, Psychological , Autism Spectrum Disorder/diagnosis , Minimal Clinically Important Difference , Psychiatric Status Rating Scales/statistics & numerical data , Activities of Daily Living/classification , Activities of Daily Living/psychology , Adolescent , Adult , Autism Spectrum Disorder/psychology , Child , Child, Preschool , Communication , Female , Humans , Infant , Male , Middle Aged , Models, Psychological , Motor Skills , Socialization , Young Adult
16.
Article En | MEDLINE | ID: mdl-28089856

This research investigated how ploidy level (diploid versus triploid) affects the heat shock protein (HSP) response in erythrocytes under different thermal stress regimes, both in vivo and in vitro, in Atlantic salmon (Salmo salar) and brook charr (Salvelinus fontinalis) in order to address the question of why triploids typically have reduced thermal tolerance. A preliminary study confirmed that identical volumes of diploid and triploid erythrocytes (which equates to a smaller number of larger cells for triploids compared to diploids) did not differ in total protein synthesis rates. After chronic (100d) acclimation of fish to 5, 15 and 25°C, triploid erythrocytes had lower HSP70, HSP90, heat shock factor 1 (HSF1) and ubiquitin (free and total) levels than diploids in both species. Furthermore, Atlantic salmon erythrocytes showed significantly higher protein breakdown (based on conjugated ubiquitin levels) in triploids than diploids after acute heat stress in vitro, but no significant difference was detected between ploidies after acute cold stress. These results indicate that: 1) triploid erythrocytes synthesize more total protein per cell than diploids as a result of increased cell size; 2) triploids have sufficient total HSP levels for survival under low stress conditions; and 3) the lower basal titres of HSPs in triploids may be a handicap when combating acute stress. Taken together, this suggests that triploids are limited in their ability to withstand thermal stress because of a reduced ability to maintain proteostasis under stressful conditions.


Acclimatization , Diploidy , Erythrocytes/metabolism , Heat-Shock Proteins/biosynthesis , Salmon/physiology , Triploidy , Trout/physiology , Animals , Aquaculture , Cell Size , Cold Temperature/adverse effects , DNA-Binding Proteins/biosynthesis , DNA-Binding Proteins/blood , DNA-Binding Proteins/metabolism , Erythrocytes/cytology , Fish Proteins/biosynthesis , Fish Proteins/blood , Fish Proteins/metabolism , Gene Expression Regulation , HSP70 Heat-Shock Proteins/biosynthesis , HSP70 Heat-Shock Proteins/blood , HSP70 Heat-Shock Proteins/metabolism , HSP90 Heat-Shock Proteins/biosynthesis , HSP90 Heat-Shock Proteins/blood , HSP90 Heat-Shock Proteins/metabolism , Heat Shock Transcription Factors , Heat-Shock Proteins/blood , Heat-Shock Proteins/metabolism , In Vitro Techniques/veterinary , Male , Protein Stability , Salmon/genetics , Salmon/metabolism , Species Specificity , Stress, Physiological , Transcription Factors/biosynthesis , Transcription Factors/blood , Transcription Factors/metabolism , Trout/genetics , Trout/metabolism , Ubiquitin/biosynthesis , Ubiquitin/blood , Ubiquitin/metabolism
17.
Article En | MEDLINE | ID: mdl-23911981

This study examined the effect of dissolved oxygen (DO) level on critical thermal maximum (CTMax) in diploid and triploid brook charr (Salvelinus fontinalis) exposed to a temperature increase of 3°C/h. Because gas solubility is inversely proportional to temperature, DO declines during standard CTMax tests. With this treatment as a baseline, oxygen or nitrogen injection was used to provide three other DO conditions during CTMax tests: two hyperoxic (maintenance at initial 10mg/L and increase from 10mg/L at 2mg/L/h) and one hypoxic (decrease from 10mg/L at 2mg/L/h). Hyperoxia had no effect on temperature at CTMax or time taken to reach CTMax. Hypoxia, on the other hand, resulted in a significantly lower CTMax and shorter time to CTMax than under standard or hyperoxic conditions, with both indices affected by triploidy but not in a consistent fashion: in one experiment triploids had a lower CTMax and shorter time to CTMax than diploids and in a second experiment they had a higher CTMax and longer time to CTMax than diploids. Indices of the secondary stress response (plasma glucose and ions) during CTMax tests under hypoxia responded as would be predicted for an acute stress, with no difference between triploids and diploids.


Heat-Shock Response , Oxygen/metabolism , Trout/metabolism , Animals , Blood Glucose , Female , Male , Potassium/blood , Sodium/blood , Triploidy , Trout/genetics
18.
Fish Physiol Biochem ; 37(2): 307-15, 2011 Jun.
Article En | MEDLINE | ID: mdl-21559796

Several measures have been developed to quantify swimming performance to understand various aspects of ecology and behaviour, as well as to help design functional applications for fishways and aquaculture. One of those measures, the optimal swimming speed, is the speed at which the cost of transport (COT) is minimal, where COT is defined as the cost of moving unit mass over unit distance. The experimental protocol to determine the optimal swimming speed involves forced-swimming in a flume or respirometer. In this study, a 4.5-m-long tilted raceway with gradually increasing upstream water speed is used to determine a novel, behaviourally based swimming parameter: the preferred swimming speed. The optimal swimming speed and the preferred swimming speed of brook charr were determined and a comparison of the two reveals that the optimal swimming speed (25.9 ± 4.5 cm s⁻¹ or 1.02 ± 0.47 bl s⁻¹) reflected the preferred swimming speed (between 20 cm s⁻¹ or 0.78 ± 0.02 bl s⁻¹ and 25 cm s⁻¹ or 0.95 ± 0.03 bl s⁻¹). The preferred swimming speed can be advantageous for the determination of swimming speeds for the use in aquaculture studies.


Swimming/physiology , Trout/physiology , Animals , Energy Metabolism/physiology , Fisheries , Models, Biological , Oxygen Consumption/physiology , Rheology
19.
Article En | MEDLINE | ID: mdl-18155947

The objective of this research was to determine whether triploid fish differ from diploids in their routine metabolic rates across a range of acclimation temperatures. Sibling diploids and triploids were acclimated to 12, 15 and 18 degrees C (Atlantic salmon; Salmo salar) and to 9, 12 and 15 degrees C (brook charr; Salvelinus fontinalis) prior to experimentation. Routine metabolic rates were then determined three times over a two-month period. Triploids of both species had higher metabolic rates than diploids at lower temperatures, and lower metabolic rates than diploids at higher temperatures, demonstrating that triploids have different (i.e., lower) thermal optima than diploids. This likely explains prior observations of high mortality of triploids at chronically elevated, but sub-lethal, rearing temperatures for sibling diploids.


Acclimatization/physiology , Adaptation, Physiological , Energy Metabolism/physiology , Polyploidy , Salmonidae/physiology , Animals , Climate , Fresh Water , Mortality , Salmonidae/genetics , Seawater , Species Specificity , Temperature , Time Factors
20.
J Exp Zool A Ecol Genet Physiol ; 307(9): 527-34, 2007 Sep 01.
Article En | MEDLINE | ID: mdl-17688249

The purpose of this study was to develop a practical protocol for the production of female populations of Arctic charr (Salvelinus alpinus). Achieving this required knowledge of the timing of gonadal differentiation. Undifferentiated gonads were observed microscopically to be present by 194 degrees C-days post-hatch and definitive germ cells by 346 degrees C-days post-hatch, where " degrees C-days" denote acquired thermal units calculated as the product of temperature and days. Some of the gonads had developed a lumen by 510 degrees C-days post-hatch, and by 681 degrees C-days post-hatch anatomical divergence into two types of gonads was clear. Two protocols (immersion and feeding) were tested for hormonal sex reversal of genotypic females using the synthetic androgen 17alpha-methyldihydrotestosterone (MDHT). Six-hour MDHT immersions (0.5, 1, 3, 5 and 10 mg/L) were carried out weekly from hatch to first feeding (140 degrees C-days post-hatch), whereas daily feeding treatments (0.5 mg/kg) went from 140 to 600 degrees C-days post-hatch. The sex ratios of all immersion experimental groups were significantly different from the control, with the proportion of presumptive males increasing as MDHT concentration increased. The highest immersion treatment, 10 mg/L, yielded a population of 90% presumptive males and 10% with atypical gonads. However, the most effective treatment, yielding a population of 90% presumptive males and no fish with atypical gonads, was the feeding treatment. Given that female salmonid fishes are homogametic, sex-reversed (masculinized) genotypic females produced in this way can serve as broodstock for the creation of all-female charr populations for aquaculture.


Cell Differentiation/physiology , Disorders of Sex Development , Gonads/physiology , Trout/physiology , Animals , Cell Differentiation/drug effects , Dihydrotestosterone/analogs & derivatives , Dihydrotestosterone/pharmacology , Feeding Methods , Female , Gonads/cytology , Gonads/drug effects , Immersion , Male , Phenotype , Sex Determination Analysis
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