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1.
Methods Mol Biol ; 2557: 583-594, 2023.
Article En | MEDLINE | ID: mdl-36512239

With one-third of all newly synthesized proteins entering the secretory pathway, correct protein sorting is essential for cellular homeostasis. In the last three decades, researchers have developed numerous biochemical, genetic, and cell biological approaches to study protein export and sorting from the trans-Golgi network (TGN). However, accurately quantifying protein transport from one compartment to the next in the secretory pathway has been challenging. The Retention Using Selective Hooks (RUSH) system is a method that allows monitoring trafficking of a protein of interest in real time, similar to a pulse-chase experiment but without the need of radiolabeling. Accurate calculations, however, are necessary and currently lacking. Here, we combine the RUSH system with live cell imaging to quantify and calculate half lives. We exemplify our approach using a soluble secreted protein (LyzC). This system will benefit membrane trafficking researchers by adding numbers to protein export and comparing the export kinetics of different cargoes and variating conditions.


Secretory Pathway , trans-Golgi Network , trans-Golgi Network/metabolism , Protein Transport , Proteins/metabolism , Homeostasis , Golgi Apparatus/metabolism
2.
Traffic ; 24(1): 4-19, 2023 01.
Article En | MEDLINE | ID: mdl-36398980

The trans-Golgi Network (TGN) sorts molecular "addresses" and sends newly synthesized proteins to their destination via vesicular transport carriers. Despite the functional significance of packaging processes at the TGN, the sorting of soluble proteins remains poorly understood. Recent research has shown that the Golgi resident protein Cab45 is a significant regulator of secretory cargo sorting at the TGN. Cab45 oligomerizes upon transient Ca2+ influx, recruits soluble cargo molecules (clients), and packs them in sphingomyelin-rich transport carriers. However, the identity of client molecules packed into Cab45 vesicles is scarce. Therefore, we used a precise and highly efficient secretome analysis technology called hiSPECs. Intriguingly, we observed that Cab45 deficient cells manifest hypersecretion of lysosomal hydrolases. Specifically, Cab45 deficient cells secrete the unprocessed precursors of prosaposin (PSAP) and progranulin (PGRN). In addition, lysosomes in these cells show an aberrant perinuclear accumulation suggesting a new role of Cab45 in lysosomal positioning. This work uncovers a yet unknown function of Cab45 in regulating lysosomal function.


Proteins , Saposins , Humans , Biological Transport , Lysosomes/metabolism , Progranulins/metabolism , Protein Transport/physiology , Proteins/metabolism , Saposins/genetics , Saposins/metabolism , trans-Golgi Network/metabolism
3.
Curr Opin Cell Biol ; 71: 55-62, 2021 08.
Article En | MEDLINE | ID: mdl-33706234

The sorting of secreted cargo proteins and their export from the trans-Golgi network (TGN) remains an enigma in the field of membrane trafficking; although the sorting mechanisms of many transmembrane proteins have been well described. The sorting of secreted proteins at the TGN is crucial for the release of signaling factors, as well as extracellular matrix proteins. These proteins are required for cell-cell communication and integrity of an organism. Missecretion of these factors can cause diseases such as neurological disorders, autoimmune disease, or cancer. The major open question is how soluble proteins that are not associated with the membrane are packed into TGN derived transport carriers to facilitate their transport to the plasma membrane. Recent investigations have identified novel types of protein and lipid machinery that facilitate the packing of these molecules into a TGN derived vesicle. In addition, novel research has uncovered an exciting link between cargo sorting and export in which TGN structure and dynamics, as well as TGN/endoplasmic reticulum contact sites, play a significant role. Here, we have reviewed the progress made in our understanding of these processes.


Endoplasmic Reticulum , trans-Golgi Network , Cell Membrane/metabolism , Endoplasmic Reticulum/metabolism , Membrane Proteins/metabolism , Protein Transport , trans-Golgi Network/metabolism
4.
J Cell Biol ; 219(8)2020 08 03.
Article En | MEDLINE | ID: mdl-32479594

Matrix metalloproteinases (MMPs) degrade several ECM components and are crucial modulators of cell invasion and tissue organization. Although much has been reported about their function in remodeling ECM in health and disease, their trafficking across the Golgi apparatus remains poorly understood. Here we report that the cis-Golgi protein nucleobindin-1 (NUCB1) is critical for MMP2 and MT1-MMP trafficking along the Golgi apparatus. This process is Ca2+-dependent and is required for invasive MDA-MB-231 cell migration as well as for gelatin degradation in primary human macrophages. Our findings emphasize the importance of NUCB1 as an essential component of MMP transport and its overall impact on ECM remodeling.


Breast Neoplasms/enzymology , Extracellular Matrix/enzymology , Golgi Apparatus/enzymology , Macrophages/enzymology , Matrix Metalloproteinase 14/metabolism , Matrix Metalloproteinase 2/metabolism , Nucleobindins/metabolism , Breast Neoplasms/genetics , Breast Neoplasms/pathology , Calcium/metabolism , Calcium Signaling , Cell Movement , Extracellular Matrix/pathology , Female , Gelatin/metabolism , HEK293 Cells , HeLa Cells , Humans , Matrix Metalloproteinase 14/genetics , Matrix Metalloproteinase 2/genetics , Nucleobindins/genetics , Protein Transport , Proteolysis , Time Factors
5.
EMBO J ; 39(15): e103457, 2020 08 03.
Article En | MEDLINE | ID: mdl-32567721

Seizure protein 6 (SEZ6) is required for the development and maintenance of the nervous system, is a major substrate of the protease BACE1 and is linked to Alzheimer's disease (AD) and psychiatric disorders, but its molecular functions are not well understood. Here, we demonstrate that SEZ6 controls glycosylation and cell surface localization of kainate receptors composed of GluK2/3 subunits. Loss of SEZ6 reduced surface levels of GluK2/3 in primary neurons and reduced kainate-evoked currents in CA1 pyramidal neurons in acute hippocampal slices. Mechanistically, loss of SEZ6 in vitro and in vivo prevented modification of GluK2/3 with the human natural killer-1 (HNK-1) glycan, a modulator of GluK2/3 function. SEZ6 interacted with GluK2 through its ectodomain and promoted post-endoplasmic reticulum transport of GluK2 in the secretory pathway in heterologous cells and primary neurons. Taken together, SEZ6 acts as a new trafficking factor for GluK2/3. This novel function may help to better understand the role of SEZ6 in neurologic and psychiatric diseases.


CA1 Region, Hippocampal/metabolism , Nerve Tissue Proteins/metabolism , Pyramidal Cells/metabolism , Receptors, Kainic Acid/metabolism , Animals , Glycosylation , Mice , Mice, Knockout , Nerve Tissue Proteins/genetics , Protein Transport , Receptors, Kainic Acid/genetics , GluK2 Kainate Receptor , GluK3 Kainate Receptor
6.
Nucleic Acids Res ; 45(1): 244-254, 2017 Jan 09.
Article En | MEDLINE | ID: mdl-28069995

ADP-ribosylation is a dynamic post-translation modification that regulates the early phase of various DNA repair pathways by recruiting repair factors to chromatin. ADP-ribosylation levels are defined by the activities of specific transferases and hydrolases. However, except for the transferase PARP1/ARDT1 little is known about regulation of these enzymes. We found that MacroD2, a mono-ADP-ribosylhydrolase, is exported from the nucleus upon DNA damage, and that this nuclear export is induced by ATM activity. We show that the export is dependent on the phosphorylation of two SQ/TQ motifs, suggesting a novel direct interaction between ATM and ADP-ribosylation. Lastly, we show that MacroD2 nuclear export temporally restricts its recruitment to DNA lesions, which may decrease the net ADP-ribosylhydrolase activity at the site of DNA damage. Together, our results identify a novel feedback regulation between two crucial DNA damage-induced signaling pathways: ADP-ribosylation and ATM activation.


Adenosine Diphosphate/metabolism , Ataxia Telangiectasia Mutated Proteins/genetics , DNA Damage , DNA Repair Enzymes/genetics , Hydrolases/genetics , Poly(ADP-ribose) Polymerases/genetics , Protein Processing, Post-Translational , Active Transport, Cell Nucleus , Amino Acid Motifs , Ataxia Telangiectasia Mutated Proteins/metabolism , Cell Line, Tumor , Cell Nucleus/metabolism , DNA Repair Enzymes/metabolism , Feedback, Physiological , HeLa Cells , Humans , Hydrolases/metabolism , Osteoblasts , Phosphorylation , Poly(ADP-ribose) Polymerases/metabolism , Signal Transduction
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