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1.
Mol Genet Genomic Med ; 12(4): e2438, 2024 Apr.
Article En | MEDLINE | ID: mdl-38666495

There is no evidence evaluating the IL10 epigenetic upregulation among mestizo children in a high-altitude Andean city in Latin America. OBJECTIVE: To identify polymorphisms and methylation profiles in the IL10 gene associated with asthma in children aged 5 to 11. METHODS: A case-control study was conducted with asthmatic and non-asthmatic children aged 5 to 11 years in Cuenca-Ecuador. Data on allergic diseases and risk factors were collected through a questionnaire for parents. Atopy was measured by skin prick test (SPT) to relevant aeroallergens. Three IL10 single nucleotide polymorphisms were evaluated in all participants, and methylation analysis was performed in 54 participants. Association between risk factors, allergic diseases and genetic factors were estimated using multivariate logistic regression. RESULTS: The results of polymorphisms showed no differences between cases and controls when comparing the SNPs rs3024495, rs3024496, rs1800896 allelic and genotypic frequencies. In the methylation analysis, no differences in the IL10 methylation profile were found between cases and controls; however, the multivariate analysis showed an association between the mother's smoking habits and the IL10 methylation profile. CONCLUSION: Smoking habit could be essential as an environmental exposure factor in regulating gene expression in children with asthma.


Asthma , DNA Methylation , Interleukin-10 , Polymorphism, Single Nucleotide , Humans , Asthma/genetics , Asthma/epidemiology , Interleukin-10/genetics , Female , Male , Child , Child, Preschool , Ecuador/epidemiology , Smoking , Mothers , Case-Control Studies
2.
Lancet Glob Health ; 11(5): e740-e748, 2023 05.
Article En | MEDLINE | ID: mdl-36972722

BACKGROUND: WHO recommends the implementation of control programmes for strongyloidiasis, a neglected tropical disease caused by Strongyloides stercoralis. Specific recommendations on the diagnostic test or tests to be used for such programmes have yet to be defined. The primary objective of this study was to estimate the accuracy of five tests for strongyloidiasis. Secondary objectives were to evaluate acceptability and feasibility of use in an endemic area. METHODS: The ESTRELLA study was a cross-sectional study for which we enrolled school-age children living in remote villages of Ecuador. Recruitment took place in two periods (Sept 9-19, 2021, and April 18-June 11, 2022). Children supplied one fresh stool sample and underwent blood collection via finger prick. Faecal tests were a modified Baermann method and an in-house real-time PCR test. Antibody assays were a recombinant antigen rapid diagnostic test; a crude antigen-based ELISA (Bordier ELISA); and an ELISA based on two recombinant antigens (Strongy Detect ELISA). A Bayesian latent class model was used to analyse the data. FINDINGS: 778 children were enrolled in the study and provided the required samples. Strongy Detect ELISA had the highest sensitivity at 83·5% (95% credible interval 73·8-91·8), while Bordier ELISA had the highest specificity (100%, 99·8-100). Bordier ELISA plus either PCR or Baermann had the best performance in terms of positive and negative predictive values. The procedures were well accepted by the target population. However, study staff found the Baermann method cumbersome and time-consuming and were concerned about the amount of plastic waste produced. INTERPRETATION: The combination of Bordier ELISA with either faecal test performed best in this study. Practical aspects (including costs, logistics, and local expertise) should, however, also be taken into consideration when selecting tests in different contexts. Acceptability might differ in other settings. FUNDING: Italian Ministry of Health. TRANSLATION: For the Spanish translation of the abstract see Supplementary Materials section.


Strongyloides stercoralis , Strongyloidiasis , Child , Animals , Humans , Strongyloides stercoralis/genetics , Strongyloidiasis/diagnosis , Strongyloidiasis/epidemiology , Cross-Sectional Studies , Ecuador , Bayes Theorem , Feasibility Studies , Real-Time Polymerase Chain Reaction , Feces , Diagnostic Tests, Routine , Sensitivity and Specificity
3.
PLoS Negl Trop Dis ; 16(5): e0010173, 2022 05.
Article En | MEDLINE | ID: mdl-35613083

BACKGROUND: The WHO roadmap for neglected tropical diseases includes yaws eradication requiring certification of elimination of transmission in all endemic and formerly endemic countries worldwide. A community-based programme for yaws control was considered to have achieved elimination of the infection in the endemic focus in Ecuador after 1993. We did a serosurvey of children in this focus to provide evidence for interruption of transmission. METHODS: Survey of serum samples collected from children aged 2 to 15 years living in the formerly endemic and in geographically contiguous areas. A convenience sample of sera collected between 2005 were 2017 from non-yaws studies, were analyzed using immunochromatic rapid tests to screen (OnSite Syphilis Ab Combo Rapid Test) for Treponema pallidum-specific antibodies and confirm (DPP Syphilis Screen and Confirm) seroreactivity based on the presence antibodies to treponemal and non-treponemal antigens. RESULTS: Seroreactivity was confirmed in 6 (0.14%, 95% CI 0.06-0.30) of 4,432 sera analyzed and was similar in formerly endemic (0.11%, (95% CI 0.01-0.75) and non-endemic (0.14%, 95% CI 0.06-0.34) communities. All seroreactors were of Afro-Ecuadorian ethnicity and most were male (4/6) and aged 10 or more years (5/6), the latter possibly indicating venereal syphilis. Only 1 seroreactor lived in a community in the Rio Santiago, that was formerly hyperendemic for yaws. CONCLUSION: We observed very low levels of treponemal transmission in both formerly endemic and non-endemic communities which might be indicative of congenital or venereal syphilis and, if yaws, would likely be insufficient to maintain transmission of this endemic childhood infection. Additional surveys of children aged 1 to 5 years are planned in Rio Santiago communities to exclude yaws transmission.


Syphilis , Yaws , Antibodies, Bacterial , Child , Ecuador/epidemiology , Female , Humans , Male , Neglected Diseases , Syphilis/epidemiology , Treponema , Treponema pallidum , Yaws/epidemiology
4.
Am J Trop Med Hyg ; 103(4): 1569-1571, 2020 10.
Article En | MEDLINE | ID: mdl-32840200

Onchocerciasis is a blinding disease caused by the filarial parasite Onchocerca volvulus, with a worldwide distribution. Onchocerciasis has been targeted for regional elimination based on annual and semiannual mass drug administration (MDA) with ivermectin in endemic communities over several years. This strategy in Ecuador led to the interruption of transmission and suspension of ivermectin MDA in 2009 with certification of elimination in 2014. In the present study, we analyzed sera collected in 2018 from 123 children aged 5-9 years from formerly hyperendemic communities in the Esmeraldas focus, Ecuador, for the presence of antibodies to Ov16 antigen. All samples were negative, indicating no evidence of transmission since MDA was stopped. Ov16-based serology offers an economic and practical alternative for measuring vector infectivity for post-certification surveillance in formerly endemic countries where expertise and capacity to reliably measure fly infectivity rates are costly to maintain.


Onchocerca volvulus/immunology , Onchocerciasis/epidemiology , Animals , Child , Child, Preschool , Disease Eradication , Ecuador/epidemiology , Endemic Diseases , Epidemiological Monitoring , Female , Humans , Male , Onchocerca volvulus/isolation & purification , Onchocerciasis/parasitology , Onchocerciasis/prevention & control
5.
Appl Clin Genet ; 13: 25-35, 2020.
Article En | MEDLINE | ID: mdl-32021381

BACKGROUND AND PURPOSE: Metabolic syndrome (MetS) is a disorder associated with an increased risk of cardiovascular disease. The frequency of each component of MetS in Turner syndrome (TS) subjects is high. An elevated incidence of hearing loss has also been reported in TS. Sensorineural hearing loss (SNHL) affects at least half of young women with TS. The association between MetS and SNHL has not been previously considered in TS. The aim of this study is to evaluate the association between these two conditions. PATIENTS AND METHODS: Cross-sectional anthropometric, cardio-metabolic and audiological data were obtained from a cohort consisting of unrelated TS subjects (>20 years of age; n = 93). Metabolic syndrome was defined according to the International Diabetes Federation criteria. Types and severity of hearing loss were based on the American Speech Hearing Association guidelines. RESULTS: Hearing loss was detected in 74% of ears from adult TS subjects and SNHL was observed in half of our TS subjects. The prevalence of MetS in TS subjects with or without SNHL was 64% and 11%, respectively (P < 0.05). After adjusting for age, MetS was related to a ninefold increase in the odds of SNHL. This odds increased in a stepwise manner as the number of MetS components increased. CONCLUSION: MetS and its individual components were associated factors for SNHL in TS subjects. A reduction in the number and severity of the components of MetS might potentially contribute to decreasing the progression of SNHL at younger ages, but further studies will be needed to explain the underlying pathological mechanism connecting MetS and SNHL.

6.
BMC Infect Dis ; 20(1): 143, 2020 Feb 14.
Article En | MEDLINE | ID: mdl-32059706

BACKGROUND: Chagas disease is caused by the haemoflagellate protozoan Trypanosoma cruzi. Currently, T. cruzi recognizes seven discrete typing units (DTUs): TcI to TcVI and Tcbat. The genetic diversity of T. cruzi is suspected to influence the clinical outcome. Acute clinical manifestations, which include myocarditis and meningoencephalitis, are sometimes fatal; occur most frequently in children and in immunocompromised individuals. Acute disease is often overlooked, leading to a poor prognosis. CASE PRESENTATION: A 38-year-old man from a subtropical area of the Andes mountains of Ecuador was hospitalized after 3 weeks of evolution with high fever, chills, an enlarged liver, spleen, and lymph nodes, as well as facial edema. ECG changes were also observed. T. cruzi was identified in blood smears, culture and amplification of DNA by PCR. Tests for anti-T. cruzi IgG and IgM and HIV were negative. Molecular typing by restriction fragment length polymorphism (PCR-RFLP) determined the parasite to DTU TcI. In the absence of a timely anti-T. cruzi medication, the patient died. CONCLUSIONS: This is a case of severe pathogenicity and the virulence of a DTU TcI strain in an adult patient. The severe acute Chagas disease was probably overlooked due to limited awareness and its low incidence. Our findings suggest that T. cruzi DTU TcI strains circulating in Ecuador are capable of causing fatal acute disease. Early diagnosis and prompt treatment is of paramount importance to avoid fatalities in acute infections.


Chagas Disease/etiology , Trypanosoma cruzi/genetics , Trypanosoma cruzi/pathogenicity , Adult , Chagas Disease/parasitology , Ecuador , Genetic Variation , Humans , Male , Molecular Typing , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Trypanosoma cruzi/classification
7.
Horm Mol Biol Clin Investig ; 42(2): 159-165, 2020 Dec 22.
Article En | MEDLINE | ID: mdl-34332520

OBJECTIVES: Reduced gene expression of PPARGC1A in subjects with insulin resistance (IR) has been reported. Insulin resistance occurs early on the course of Turner syndrome (TS). The main objective of this study was to evaluate the relationship between PPARGC1A promoter DNA methylation status in lymphocytes and insulin sensitivity and secretion in Ecuadorian females with TS. METHODS: We examined a cohort of 34 Ecuadorian patients with TS along with a sex-, age- and BMI-matched reference group. All subjects received a standard 75 g oral glucose tolerance test. Insulin resistance and secretion indices were calculated. The PPARGC1A methylated DNA/unmethylated DNA ratio and mitochondrial content (mtDNA/nDNA ratio) were further determined. RESULTS: Notably, the PPARGC1A DNA methylation level was significantly higher in TS subjects than the reference group and correlated with IR indices. Conversely, mitochondrial content was significantly lower in the study group than healthy controls and negatively correlated with the PPARGC1A methylated DNA/unmethylated DNA ratio in TS individuals. PPARGC1A promoter DNA methylation status contributed to 20% of the total variability in Homeostasis Model Assessment for Insulin Resistance (HOMA-IR) independently of BMI or age in TS subjects. CONCLUSIONS: Our collective findings suggest that expression of PPARGC1A and lower mitochondrial number affect the metabolic phenotype in TS subjects.


DNA Methylation , Gene Expression Regulation , Glucose/metabolism , Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha/genetics , Promoter Regions, Genetic , Turner Syndrome/genetics , Turner Syndrome/metabolism , Biomarkers , Cross-Sectional Studies , DNA, Mitochondrial/genetics , Disease Susceptibility , Ecuador/epidemiology , Female , Genetic Predisposition to Disease , Humans , Insulin Resistance/genetics , Insulin-Secreting Cells/metabolism , Peroxisome Proliferator-Activated Receptor Gamma Coactivator 1-alpha/metabolism , Turner Syndrome/epidemiology
8.
Am J Trop Med Hyg ; 102(2): 346-349, 2020 02.
Article En | MEDLINE | ID: mdl-31833465

Data on the prevalence of strongyloidiasis in Ecuador are patchy. The aim of this study was to document the presence of Strongyloides stercoralis infection in rural communities of different provinces of Ecuador. We tested 1,418 serum samples stored at the biobank of the Central University of Ecuador, Quito, with an ELISA test for Strongyloides. The samples had been collected in eight different provinces of Ecuador. Two hundred ninety-four samples (20.7%) were positive, and Jipijapa, Manabí Province, was the site with the largest proportion of positive samples (66.7%). Further surveys aimed at estimating the prevalence of the infection should be carried out in areas where the infection seems highly prevalent, and ad hoc control measures should be adopted.


Seroepidemiologic Studies , Strongyloides stercoralis , Strongyloidiasis/epidemiology , Strongyloidiasis/parasitology , Adult , Animals , Child , Cross-Sectional Studies , Ecuador/epidemiology , Female , Humans , Male
9.
Am J Trop Med Hyg ; 101(3): 650-653, 2019 09.
Article En | MEDLINE | ID: mdl-31333160

The Awa indigenous people of Ecuador live in remote areas and were included in health programs only recently. The first screening for parasitic infections in the Awa communities was implemented in the context of community epidemiology. During the site visits in each community, the health-care staff collected the samples for stool microscopy and serology for Strongyloides. A total of 705 individuals consented for the study, representing 40% of the Awa population living in the targeted communities; 184 (26%) participants supplied a stool sample. Giardia intestinalis was found in about 11% of samples. Prevalence of Ascaris lumbricoides and Trichuris trichiura was 54.9% and 36.9%, respectively. No hookworm eggs were found. In addition, Strongyloides stercoralis larvae were found in eight individuals (4.3%), whereas serology was positive in 22.7% of the individuals tested. The community-based approach resulted in an impressive participation. There was a high prevalence of parasites associated with relevant morbidity.


Intestinal Diseases, Parasitic/diagnosis , Intestinal Diseases, Parasitic/epidemiology , Mass Screening , Public Health/methods , Child , Ecuador , Feces/parasitology , Female , Humans , Indigenous Peoples , Intestinal Diseases, Parasitic/ethnology , Male , Prevalence , Rural Population
10.
Rev. argent. cardiol ; 87(2): 98-102, abr. 2019. tab
Article Es | LILACS-Express | LILACS | ID: biblio-1057323

RESUMEN: Introducción: En los últimos años se ha evidenciado que los procesos inflamatorios están directamente relacionados con la formación de la placa ateroesclerótica, causante de la cardiopatía isquémica (CI). Por esta razón, toda molécula relacionada con aquellos procesos es de vital importancia. Las interleucinas (IL) son citoquinas proinflamatorias y sus polimorfismos aparentemente incrementan el proceso inflamatorio. Los más asociados con la cardiopatía isquémica son algunos polimorfismos de las interleucinas 1 (IL-1) y 6 (IL-6). Objetivos: Establecer la relación de los polimorfismos G-174C y G-572C de la interleucina-6 y C-511T y C+3953T de la interleucina-1 con la cardiopatía isquémica. Material y métodos: Se desarrolló un estudio de tipo analítico retrospectivo, de 76 casos y 76 controles, de pacientes atendidos en el servicio de hemodinámica del Hospital Carlos Andrade Marín (HCAM), de Quito. La genotipificación se hizo mediante la reacción en cadena de la polimerasa con enzimas de restricción (PCR-RFLP). Resultados: De los cuatro polimorfismos estudiados, únicamente el IL-6 174 GG tuvo una asociación estadísticamente significativa con la cardiopatía isquémica. La regresión logística usada para determinar los predictores más importantes de cardiopatía isquémica mostró que el genotipo IL-6 174 GG (OR 4,065, p = < 0,001) se asoció con un incremento del riesgo de presentar cardiopatía isquémica de forma independiente. Conclusiones: El genotipo GG del polimorfismo IL-6 G-174C confiere un riesgo 4 veces superior de desarrollar cardiopatía isquémica, mientras que los tres polimorfismos restantes no confieren riesgos.


ABSTRACT: Background: It has been recently found that inflammatory processes are directly related to the development of atherosclerotic plaque, causing ischemic heart disease. For this reason, every molecule related to these processes is critically important. Interleukins (IL) are proinflammatory cytokines, and their polymorphisms seem to increase the inflammatory progress. IL-1 and IL-6 polymorphisms are the ones most significantly associated with ischemic heart disease. Objectives: The aim of this study was to establish the relationship of IL-6 G-174C and G-572 C and IL-1 C-511T and C+3953T polymorphisms with ischemic heart disease. Methods: A retrospective study of 76 cases and 76 controls was carried out in patients attending the hemodynamics service of Carlos Andrade Marín Hospital (HCAM) of Quito, Ecuador. Genotyping was done on the basis of polymerase chain reaction with restriction enzymes (PCR-RFLP). Results: Among the four polymorphisms studied, only IL-6 -174 GG was significantly associated with ischemic heart disease. The logistic regression analysis used to determine the most important predictors of ischemic heart disease showed that the IL-6 -174 GG genotype was associated with an increased risk of independently presenting ischemic heart disease (OR 4.065, p ≤ 0.001). Conclusions: The GG genotype of IL-6 G-174C polymorphism confers a fourfold higher risk of developing ischemic heart disease, while the remaining three polymorphisms do not pose risks in this human population.

11.
Am J Trop Med Hyg ; 100(1): 81-82, 2019 01.
Article En | MEDLINE | ID: mdl-30398142

Microscopic examination of stool samples has been considered to be the "gold standard" for diagnosis of intestinal parasites. Recently, polymerase chain reaction (PCR) has been approved by the World Health Organization as the method of choice for the diagnosis of Entamoeba histolytica. Of the 106 stool samples collected from the Esmeraldas and Pichincha provinces of Ecuador, all (100%) were positive for E. histolytica/Entamoeba dispar by light microscopy, whereas using real-time PCR (RT-PCR) DNA amplification, 74 (69.8%) were positive for E. dispar and only three (2.8%) were positive for E. histolytica. Some 29 (27.4%) samples were negative for the presence of either E. histolytica or E. dispar, this may be due the presence of Entamoeba mosksvskii, which is morphologically identical to E. histolytica/E. dispar and not specifically targeted by the RT-PCR used. These results indicate the necessity of reevaluating the epidemiology of amebiasis in Ecuador as the prominent species found are nonpathogenic.


Entamoeba histolytica/isolation & purification , Entamoeba/isolation & purification , Entamoebiasis/diagnosis , Intestinal Diseases, Parasitic/diagnosis , Molecular Diagnostic Techniques , Real-Time Polymerase Chain Reaction , Antigens, Protozoan/analysis , DNA, Protozoan/genetics , Ecuador/epidemiology , Entamoeba/classification , Entamoeba histolytica/pathogenicity , Entamoebiasis/epidemiology , Entamoebiasis/parasitology , Enzyme-Linked Immunosorbent Assay , Feces/parasitology , Humans , Intestinal Diseases, Parasitic/epidemiology , Microscopy
12.
Front Microbiol ; 7: 1778, 2016.
Article En | MEDLINE | ID: mdl-27877170

Background: Dried blood spots (DBS) are used for epidemiological surveys on infectious diseases in settings where limited resources are available. In fact, DBS can help to overcome logistic difficulties for the collection, transport and storage of biological specimens. Objective: To evaluate the accuracy of Strongyloides stercoralis serology performed on DBS. Methods: A survey was proposed to children attending a school in the village of Borbon, Ecuador, and to their parents/guardians. Each participant gave consent to the collection of both serum and DBS specimens. DBS absorbed on filter papers were analyzed with a commercially available ELISA test for S. stercoralis antibodies, as well as with standard serology. The agreement between the two methods was assessed through the Cohen's kappa coefficient. Results: The study sample was composed of 174 children and 61 adults, for a total of 235 serum and 235 DBS samples. The serology was positive in 31/235 (13%) serum samples, and in 27/235 (11%) DBS: 4 samples resulted discordant (positive at standard serology). Cohen's kappa coefficient was 0.921 (95% CI 0.845 - 0.998), indicating a high rate of concordance. Conclusion: DBS are suitable for in field-surveys requiring serological testing for S. stercoralis.

13.
Infect Genet Evol ; 41: 32-35, 2016 07.
Article En | MEDLINE | ID: mdl-27034056

Blastocystis is a cosmopolitan enteric protist colonizing probably more than 1 billion people. This protozoan exhibits genetic diversity and is subdivided into subtypes (STs). The aim of this study was to determine the distribution of Blastocystis STs in symptomatic and asymptomatic human samples from different countries of South America. A total of 346 fecal samples were genotyped by SSU rDNA showing ST1 (28.3%), ST2 (22.2%), ST3 (36.7%), ST4 (2%), ST5 (2.3%), ST6 (2%), ST7 (2.3%), ST8 (0.6%), ST12 (0.9%) and a novel ST (2.7%). These findings update the epidemiology of Blastocystis in South America and expand our knowledge of the phylogeographic differences exhibited by this stramenopile.


Blastocystis Infections/epidemiology , Blastocystis/genetics , DNA, Protozoan/genetics , Phylogeny , Asymptomatic Diseases , Blastocystis/classification , Blastocystis/isolation & purification , Blastocystis Infections/parasitology , Blastocystis Infections/transmission , Feces/parasitology , Female , Genotype , Humans , Male , Molecular Epidemiology , Phylogeography , Severity of Illness Index , South America/epidemiology
14.
Pediatr Infect Dis J ; 34(9): 1031-3, 2015 Sep.
Article En | MEDLINE | ID: mdl-26090575

We studied the transmission of norovirus infection in households in Quininde, Ecuador. Among household contacts of norovirus positive children with diarrhea, norovirus negative children with diarrhea and asymptomatic controls, infection attack rates were 33%, 8% and 18%, respectively (N = 45, 36, 83). Infection attack rates were higher when index children had a higher viral load.


Caliciviridae Infections/epidemiology , Caliciviridae Infections/transmission , Family Characteristics , Gastroenteritis/epidemiology , Gastroenteritis/virology , Norovirus/isolation & purification , Adolescent , Child , Child, Preschool , Ecuador/epidemiology , Female , Humans , Infant , Infant, Newborn , Male , Viral Load
15.
J Infect Dis ; 211(11): 1813-21, 2015 Jun 01.
Article En | MEDLINE | ID: mdl-25505295

BACKGROUND: Although norovirus is the most common cause of gastroenteritis, there are few data on the community incidence of infection/disease or the patterns of acquired immunity or innate resistance to norovirus. METHODS: We followed a community-based birth cohort of 194 children in Ecuador with the aim to estimate (1) the incidence of norovirus gastroenteritis from birth to age 3 years, (2) the protective effect of norovirus infection against subsequent infection/disease, and (3) the association of infection and disease with FUT2 secretor status. RESULTS: Over the 3-year period, we detected a mean of 2.26 diarrheal episodes per child (range, 0-12 episodes). Norovirus was detected in 260 samples (18%) but was not found more frequently in diarrheal samples (79 of 438 [18%]), compared with diarrhea-free samples (181 of 1016 [18%]; P = .919). A total of 66% of children had at least 1 norovirus infection during the first 3 years of life, and 40% of children had 2 infections. Previous norovirus infections were not associated with the risk of subsequent infection. All genogroup II, genotype 4 (GII.4) infections were among secretor-positive children (P < .001), but higher rates of non-GII.4 infections were found in secretor-negative children (relative risk, 0.56; P = .029). CONCLUSIONS: GII.4 infections were uniquely detected in secretor-positive children, while non-GII.4 infections were more often found in secretor-negative children.


Caliciviridae Infections/genetics , Caliciviridae Infections/virology , Fucosyltransferases/genetics , Gastroenteritis/genetics , Gastroenteritis/virology , Norovirus/genetics , Caliciviridae Infections/epidemiology , Child, Preschool , Cohort Studies , Diarrhea/epidemiology , Diarrhea/virology , Ecuador/epidemiology , Feces/virology , Gastroenteritis/epidemiology , Genetic Predisposition to Disease/genetics , Genotype , Humans , Incidence , Infant , Infant, Newborn , Male , Norovirus/immunology , Norovirus/isolation & purification , Saliva/chemistry , Galactoside 2-alpha-L-fucosyltransferase
16.
Mem Inst Oswaldo Cruz ; 108(4): 512-5, 2013 Jun.
Article En | MEDLINE | ID: mdl-23827993

The aim of this study was to determine the genetic diversity of Giardia duodenalis present in a human population living in a northern Ecuadorian rain forest. All Giardia positive samples (based on an ELISA assay) were analysed using a semi-nested polymerase chain reaction-restriction fragment length polymorphism assay that targets the glutamate dehydrogenase (gdh) gene; those amplified were subsequently genotyped using NlaIV and RsaI enzymes. The gdh gene was successfully amplified in 74 of 154 ELISA positive samples; 69 of the 74 samples were subsequently genotyped. Of these 69 samples, 42 (61%) were classified as assemblage B (26 as BIII and 16 as BIV), 22 (32%) as assemblage A (3 as AI and 19 as AII) and five (7%) as mixed AII and BIII types. In this study site we observe similar diversity in genotypes to other regions in Latin America, though in contrast to some previous studies, we found similar levels of diarrheal symptoms in those individuals infected with assemblage B compared with those infected with assemblage A.


Giardia/genetics , Giardiasis/parasitology , Glutamate Dehydrogenase/genetics , Ecuador , Feces/parasitology , Genotype , Giardia/enzymology , Giardia/isolation & purification , Humans , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Rural Population
17.
PLoS One ; 8(7): e67763, 2013.
Article En | MEDLINE | ID: mdl-23874443

BACKGROUND: We studied the transmission of rotavirus infection in households in peri-urban Ecuador in the vaccination era. METHODS: Stool samples were collected from household contacts of child rotavirus cases, diarrhea controls and healthy controls following presentation of the index child to health facilities. Rotavirus infection status of contacts was determined by RT-qPCR. We examined factors associated with transmissibility (index-case characteristics) and susceptibility (household-contact characteristics). RESULTS: Amongst cases, diarrhea controls and healthy control household contacts, infection attack rates (iAR) were 55%, 8% and 2%, (n = 137, 130, 137) respectively. iARs were higher from index cases with vomiting, and amongst siblings. Disease ARs were higher when the index child was <18 months and had vomiting, with household contact <10 years and those sharing a room with the index case being more susceptible. We found no evidence of asymptomatic infections leading to disease transmission. CONCLUSION: Transmission rates of rotavirus are high in households with an infected child, while background infections are rare. We have identified factors associated with transmission (vomiting/young age of index case) and susceptibility (young age/sharing a room/being a sibling of the index case). Vaccination may lead to indirect benefits by averting episodes or reducing symptoms in vaccinees.


Family Characteristics , Rotavirus Infections/prevention & control , Rotavirus Infections/transmission , Rotavirus Vaccines/immunology , Rotavirus/immunology , Adolescent , Adult , Case-Control Studies , Child , Child, Preschool , Diarrhea/prevention & control , Diarrhea/virology , Ecuador , Female , Genotype , Humans , Infant , Infant, Newborn , Male , Middle Aged , Molecular Sequence Data , Odds Ratio , Rotavirus/genetics , Rotavirus Infections/epidemiology , Seasons , Vaccination , Young Adult
18.
Mem. Inst. Oswaldo Cruz ; 108(4): 512-515, jun. 2013. tab, graf
Article En | LILACS | ID: lil-678280

The aim of this study was to determine the genetic diversity of Giardia duodenalis present in a human population living in a northern Ecuadorian rain forest. All Giardia positive samples (based on an ELISA assay) were analysed using a semi-nested polymerase chain reaction-restriction fragment length polymorphism assay that targets the glutamate dehydrogenase (gdh) gene; those amplified were subsequently genotyped using NlaIV and RsaI enzymes. The gdh gene was successfully amplified in 74 of 154 ELISA positive samples; 69 of the 74 samples were subsequently genotyped. Of these 69 samples, 42 (61%) were classified as assemblage B (26 as BIII and 16 as BIV), 22 (32%) as assemblage A (3 as AI and 19 as AII) and five (7%) as mixed AII and BIII types. In this study site we observe similar diversity in genotypes to other regions in Latin America, though in contrast to some previous studies, we found similar levels of diarrheal symptoms in those individuals infected with assemblage B compared with those infected with assemblage A.


Humans , Giardia/genetics , Giardiasis/parasitology , Glutamate Dehydrogenase/genetics , Ecuador , Feces/parasitology , Genotype , Giardia/enzymology , Giardia/isolation & purification , Polymerase Chain Reaction , Polymorphism, Restriction Fragment Length , Rural Population
19.
Am J Trop Med Hyg ; 88(6): 1041-7, 2013 Jun.
Article En | MEDLINE | ID: mdl-23509117

Diagnosis of gastrointestinal parasites has traditionally relied on stool microscopy, which has low diagnostic sensitivity and specificity. We have developed a novel, rapid, high-throughput quantitative multi-parallel real-time polymerase chain reaction (qPCR) platform. Species-specific primers/probes were used for eight common gastrointestinal parasite pathogens: Ascaris lumbricoides, Necator americanus, Ancylostoma duodenale, Giardia lamblia, Cryptosporidium spp., Entamoeba histolytica, Trichuris trichiura, and Strongyloides stercoralis. Stool samples from 400 13-month-old children in rural Ecuador were analyzed and the qPCR was compared with a standard direct wet mount slide for stool microscopy, as were 125 8-14-year-old children before and after anthelmintic treatment. The qPCR showed higher detection rates for all parasites compared with direct microscopy, Ascaris (7.0% versus 5.5%) and for Giardia (31.5% versus 5.8%). Using an enhanced DNA extraction method, we were able to detect T. trichiura DNA. These assays will be useful to refine treatment options for affected populations, ultimately leading to better health outcomes.


DNA, Helminth/isolation & purification , Intestinal Diseases, Parasitic/diagnosis , Intestinal Diseases, Parasitic/epidemiology , Real-Time Polymerase Chain Reaction/methods , Adolescent , Ancylostoma/isolation & purification , Animals , Anthelmintics/therapeutic use , Ascaris lumbricoides/isolation & purification , Child , Cryptosporidium/isolation & purification , DNA Primers , Ecuador , Empirical Research , Entamoeba histolytica/isolation & purification , Feces/parasitology , Giardia lamblia/isolation & purification , High-Throughput Screening Assays/methods , Humans , India , Infant , Intestinal Diseases, Parasitic/drug therapy , Intestinal Diseases, Parasitic/parasitology , Mali , Microscopy/methods , Necator americanus/isolation & purification , North America , Prevalence , Reproducibility of Results , Rural Population , Sensitivity and Specificity , Species Specificity , Strongyloides stercoralis/isolation & purification , Trichuris/isolation & purification
20.
Trop Med Health ; 41(1): 21-5, 2013 Mar.
Article En | MEDLINE | ID: mdl-23532947

To determine the extent of Trypanosoma cruzi infection and/or transmission in the southern Amazon region of Ecuador, three indigenous communities in the provinces of Pastaza and Morona Santiago were serosurveyed. Chagatest(TM), Immunocomb(®)II and immunofluorescent (IF) assays were used. Among the 385 inhabitants examined, nine (2.34%) were seropositive for T. cruzi infection. Of the nine positive sera, four (44.4%) fall in the 10-19, one each in the 20-29, 30-39 and 40-49, and two in the 50-59 age groups. These results suggested the possible existence of an autochthonous active T. cruzi transmission in the region and provide the first serological evidence for T. cruzi infection in the southern province of Morona Santiago bordering Peru. Further studies are needed in these Amazonian provinces to ascertain the spread of T. cruzi infection in the area.

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