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1.
Genomics ; 116(4): 110876, 2024 Jul.
Article En | MEDLINE | ID: mdl-38849019

Timely accurate and cost-efficient detection of colorectal cancer (CRC) is of great clinical importance. This study aims to establish prediction models for detecting CRC using plasma cell-free DNA (cfDNA) fragmentomic features. Whole-genome sequencing (WGS) was performed on cfDNA from 620 participants, including healthy individuals, patients with benign colorectal diseases and CRC patients. Using WGS data, three machine learning methods were compared to build prediction models for the stratification of CRC patients. The optimal model to discriminate CRC patients of all stages from healthy individuals achieved a sensitivity of 92.31% and a specificity of 91.14%, while the model to separate early-stage CRC patients (stage 0-II) from healthy individuals achieved a sensitivity of 88.8% and a specificity of 96.2%. Additionally, the cfDNA fragmentation profiles reflected disease-specific genomic alterations in CRC. Overall, this study suggests that cfDNA fragmentation profiles may potentially become a noninvasive approach for the detection and stratification of CRC.


Colorectal Neoplasms , Early Detection of Cancer , Humans , Colorectal Neoplasms/genetics , Colorectal Neoplasms/blood , Colorectal Neoplasms/diagnosis , Male , Middle Aged , Female , Early Detection of Cancer/methods , Aged , Cell-Free Nucleic Acids/genetics , Cell-Free Nucleic Acids/blood , Biomarkers, Tumor/genetics , Biomarkers, Tumor/blood , Machine Learning , Adult , Whole Genome Sequencing/methods , DNA Fragmentation
2.
Int J Biol Macromol ; 267(Pt 2): 131461, 2024 May.
Article En | MEDLINE | ID: mdl-38599424

Recycling and high-value reutilization of waste cotton fabrics (WCFs) has attracted a widespread concern. One potential solution is to extract nanocellulose. Sulfuric acid hydrolysis is a conventional method for the production of nanocellulose with high negative charge from WCFs. However, the recycling and disposal of chemicals in nanocellulose production, along with low yields, remain significant challenges. Consequently, there is a pressing need for a sustainable method to produce nanocellulose at higher yield without the use of chemicals. Herein, we propose a green, sustainable and chemical-free method to extract nanocellulose from WCFs. The nanocellulose displayed a rod-like shape with a length of 50-300 nm, a large aspect ratio of 18.4 ± 2 and the highest yield of up to 89.9 %. The combined short-time and efficient two-step process, involving electron beam irradiation (EBI) and high-pressure homogenization (HPH), offers a simple and efficient alternative approach with a low environmental impact, to extract nanocellulose. EBI induced a noticeable degradation in WCFs and HPH exfoliated cellulose to nano-size with high uniformity via mechanical forces. The as-prepared nanocellulose exhibits excellent emulsifying ability as the Pickering emulsion emulsifier. This work provides a facile and efficient approach for nanocellulose fabrication as well as a sustainable way for recycle and reutilization of the waste cotton fabrics.


Cellulose , Cotton Fiber , Cellulose/chemistry , Electrons , Green Chemistry Technology/methods , Hydrolysis
3.
Cell Signal ; 119: 111185, 2024 Jul.
Article En | MEDLINE | ID: mdl-38643947

Colorectal cancer, the third most prevalent malignant cancer, is associated with poor prognosis. Recent studies have investigated the mechanisms underlying cuproptosis and disulfidptosis in colorectal cancer. However, whether genes linked to these processes impact the prognosis of colorectal cancer patients through analogous mechanisms remains unclear. In this study, we developed a model of cuproptosis and disulfidptosis in colorectal cancer and concurrently explored the role of the pivotal model gene HSPA8 in colorectal cancer cell lines. Our results revealed a positive correlation between cuproptosis and disulfidptosis, both of which are emerging as protective factors for the prognosis of CRC patients. Consequently, a prognostic model encompassing HSPA8, PDCL3, CBX3, ATP6V1G1, TAF1D, RPL4, and RPL14 was constructed. Notably, the key gene in our model, HSPA8, exhibited heightened expression and was validated as a protective prognostic factor in colorectal cancer, exerting inhibitory effects on colorectal cancer cell proliferation. This study offers novel insights into the interplay between cuproptosis and disulfidptosis. The application of the prognostic model holds promise for more effectively predicting the overall survival of colorectal cancer patients.


Colorectal Neoplasms , HSC70 Heat-Shock Proteins , Humans , Colorectal Neoplasms/genetics , Colorectal Neoplasms/pathology , HSC70 Heat-Shock Proteins/metabolism , HSC70 Heat-Shock Proteins/genetics , Cell Line, Tumor , Prognosis , Cell Proliferation , Gene Expression Regulation, Neoplastic , Apoptosis/genetics
4.
Discov Oncol ; 14(1): 69, 2023 May 17.
Article En | MEDLINE | ID: mdl-37198416

OBJECTIVE: This study aims to build a prognostic model of hepatocellular carcinoma (HCC) with ferroptosis-associated genes and explore their molecular function. METHODS: Gene expression data and clinical information were obtained from the Gene Expression Omnibus (GEO) and The Cancer Genome Atlas (TCGA) databases and the International Cancer Genome Consortium (ICGC). A ferroptosis-associated gene set was obtained from the FerrDb database to identify differentially expressed genes. Then, we performed pathway enrichment analysis and immune infiltration analysis. A combined model based on ferroptosis-associated genes for predicting the overall survival of HCC was built by univariate and multivariate Cox regression analyses. Quantitative real-time polymerase chain reaction, Western blotting, colony formation, CCK-8, and EdU incorporation assays were performed to clarify the function of CAPG in the regulation of cell proliferation in human HCC. Ferroptosis was evaluated by glutathione (GSH), malondialdehyde (MDA), and total iron detection. RESULTS: Forty-nine ferroptosis-related genes were significantly correlated with HCC, 19 of which had prognostic significance. CAPG, SLC7A11 and SQSTM1 were used to construct a novel risk model. The areas under the curves (AUCs) were 0.746 and 0.720 (1 year) in the training and validation groups, respectively. The survival analysis indicated that patients with high risk scores exhibited worse survival in the training and validation groups. The risk score was also identified as an independent prognostic factor of overall survival (OS), which established and validated the predictive abilities of the nomogram. The risk score was also significantly correlated with the expression of immune checkpoint genes. In vitro data showed that CAPG knockdown dramatically suppressed HCC cell proliferation, and the underlying molecular mechanisms might be that the silencing of CAPG reduced the expression of SLC7A11 and promoted ferroptosis. CONCLUSION: The established risk model can be used to predict the prognosis of HCC. At the mechanistic level, CAPG may drive HCC progression by regulating SLC7A11, and ferroptosis activation in HCC patients with high CAPG expression may serve as a potential therapeutic strategy.

5.
Food Res Int ; 164: 112410, 2023 02.
Article En | MEDLINE | ID: mdl-36737991

Pulp breakdown is the main reason for the reduction of fruit quality. However, there are relatively few studies on small molecule metabolites based on the pulp breakdown of dragon fruit. In this study, four dragon fruit cultivars were comparatively analyzed during pulp breakdown. According to five firmness-related and six quality-related indicators, the pulp breakdown rates from low to high were 'Baiyulong (WP, with white pulp)', 'Dahong (RP, with red pulp)', 'Hongshuijing (CRP, with red pulp)' and 'Baishuijing (CWP, with white pulp)'. Five secondary metabolites showed cultivar-specific accumulation, and the increase of their contents during postharvest storage might be related to delaying pulp breakdown. After multiple metabolomics analysis, a total of 186 metabolites were identified, among which 14 primary metabolites, 23 volatiles, 2 hydrolyzed amino acids and 12 free amino acids were considered as key metabolites. The contents of hydrocarbons in WP and RP were much higher than that in CWP and CRP, which was negatively correlated with pulp breakdown. White pulp were rich in amino acids, while red pulp had more soluble sugars, aldehydes and terpenes. The contents of 13 key metabolites increased during pulp breakdown in all four cultivars, mainly including amino acids and alkanes. The contents and changes of those key metabolites might directly or indirectly respond to the pulp quality and resistance of dragon fruit.


Fruit , Metabolomics , Fruit/chemistry , Sugars/analysis , Amino Acids/analysis
6.
Metabolites ; 10(3)2020 Mar 14.
Article En | MEDLINE | ID: mdl-32183356

Red light irradiation can effectively prolong the shelf-life of many fruit. However, little is known about red light-induced metabolite and enzyme activities. In this study, pitaya fruit was treated with 100 Lux red light for 24 h. Red light irradiation significantly attenuated the variation trend of senescence traits, such as the decrease of total soluble solid (TSS) and TSS/acidity (titratable acidity, TA) ratio, the increase of TA, and respiratory rate. In addition, the reactive oxygen species (ROS) related characters, primary metabolites profiling, and volatile compounds profiling were determined. A total of 71 primary metabolites and 67 volatile compounds were detected and successfully identified by using gas chromatography mass spectrometry (GC-MS). Red light irradiation enhanced glycolysis, tricarboxylic acid (TCA) cycle, aldehydes metabolism, and antioxidant enzymes activities at early stage of postharvest storage, leading to the reduction of H2O2, soluble sugars, organic acids, and C-6 and C-7 aldehydes. At a later stage of postharvest storage, a larger number of resistance-related metabolites and enzyme activities were induced in red light-treated pitaya peel, such as superoxide dismutase (SOD), ascorbate peroxidase (APX), 1,1-diphenyl-2-picryl-hydrazyl (DPPH) radical-scavenging, reducing power, fatty acids, and volatile aroma.

7.
Biomolecules ; 9(10)2019 09 23.
Article En | MEDLINE | ID: mdl-31548496

The banana is one of the most important fruits in the world. Bananas undergo a rapid ripening process after harvest, resulting in a short shelf. In this study, the mechanism underlying pulp ripening of harvested bananas was investigated using integrated transcriptomic, proteomic, and metabolomic analysis. Ribonucleic acid sequencing (RNA-Seq) revealed that a great number of genes related to transcriptional regulation, signal transduction, cell wall modification, and secondary metabolism were up-regulated during pulp ripening. At the protein level, 84 proteins were differentially expressed during pulp ripening, most of which were associated with energy metabolism, oxidation-reduction, cell wall metabolism, and starch degradation. According to partial least squares discriminant analysis, 33 proteins were identified as potential markers for separating different ripening stages of the fruit. In addition to ethylene's central role, auxin signal transduction might be involved in regulating pulp ripening. Moreover, secondary metabolism, energy metabolism, and the protein metabolic process also played an important role in pulp ripening. In all, this study provided a better understanding of pulp ripening of harvested bananas.


Gene Expression Profiling/methods , Metabolomics/methods , Musa/physiology , Proteomics/methods , Energy Metabolism , Ethylenes/chemistry , Gene Expression Regulation, Plant , Indoleacetic Acids/chemistry , Least-Squares Analysis , Mass Spectrometry , Plant Proteins/genetics , Plant Proteins/metabolism , Secondary Metabolism , Sequence Analysis, RNA
8.
J Sci Food Agric ; 99(15): 6868-6881, 2019 Dec.
Article En | MEDLINE | ID: mdl-31386200

BACKGROUND: Papaya, as one of the most important tropical fruits in the world, is easily subjected to chilling injury (CI). Research on the effect of chilling temperature storage on the metabolic changes of papaya peel is limited. RESULTS: Chilling temperature (4 °C) inhibited fruit ripening and induced CI on papaya fruit. Additionally, low temperature altered the concentrations of 45 primary metabolites and 52 aroma volatile compounds in the papaya peel. Papaya fruit stored at different temperatures could be separated using partial least squares-discriminant analysis (PLS-DA) with primary metabolites and volatile compounds as variables. In total, 18 primary metabolites and 22 volatiles with variable importance in projection (VIP) score higher than one might be considered as potential markers in papaya peel in response to chilling stress. Metabolites related to aroma, such as organic acid, amino acids, hexanal, carbonic acid, pentadecyl propyl ester and methyl geranate, caryophyllene accounted for major part of the metabolism changes of papaya peel and contributed a lot in response to cold stress. CONCLUSION: This study added new insights regarding effect of chilling stress on metabolites in papaya peel. Some important metabolites might be indicator for chilling stress and detection of these metabolites will guide us to regulate the storage temperature to avoid chilling and to prolong storage of papaya fruit. © 2019 Society of Chemical Industry.


Carica/metabolism , Fruit/chemistry , Carica/chemistry , Cold Temperature , Food Storage , Fruit/metabolism , Plant Proteins/metabolism , Volatile Organic Compounds/chemistry , Volatile Organic Compounds/metabolism
9.
BMC Plant Biol ; 19(1): 289, 2019 Jul 01.
Article En | MEDLINE | ID: mdl-31262259

BACKGROUND: Banana anthracnose, caused by Colletotrichum musae, is one of the most severe postharvest diseases in banana. Melatonin is widely known for its role in enhancing plant stress tolerance. However, little is known about the control of melatonin on anthracnose in postharvest banana fruit. RESULTS: In this study, exogenous melatonin treatment could significantly reduce the incidence of anthracnose in ripe yellow banana fruit and delay fruit senescence. However, melatonin treatment did not affect the growth of Colletotrichum musae in vitro. Transcriptomic analysis of banana peel showed that 339 genes were up-regulated and 241 were down-regulated in the peel after melatonin treatment, compared with the control. Based on GO terms and KEGG pathway, these up-regulated genes were mainly categorized into signal transduction, cell wall formation, secondary metabolism, volatile compounds synthesis and response to stress, which might be related to the anti-anthracnose of banana fruit induced by melatonin treatment. This view was also supported by the increase of volatile compounds, cell wall components and IAA content in the melatonin-treated fruit peel via the metabolomic analysis. After melatonin treatment, auxin, ethylene and mitogen-activated protein kinase (MAPK) signaling pathways were enhanced, which might be involved in the enhanced fruit resistance by regulating physiological characteristics, disease-resistant proteins and metabolites. CONCLUSIONS: Our results provide a better understanding of the molecular processes in melatonin treatment delaying banana fruit senescence and anthracnose incidence.


Colletotrichum/physiology , Genes, Plant , Melatonin/metabolism , Metabolome , Musa/microbiology , Plant Diseases/microbiology , Transcriptome , Colletotrichum/drug effects , Fruit/microbiology , Gene Expression Profiling , Melatonin/administration & dosage , Metabolomics , Musa/genetics
10.
Food Res Int ; 120: 339-351, 2019 06.
Article En | MEDLINE | ID: mdl-31000248

The pericarp browning is an important physiological index during the postharvest storage, which seriously shortens the shelf-life of litchi fruit. In this study, the browning index of four litchi cultivars were compared, and the shelf-life, from longer to shorter, was 'Feizixiao (FXZ)', 'Jingganghongnuo (JGHN)', 'Huaizhi (HZ)' and 'Nuomici (NMC)', respectively. Then, comparative metabolomics were performed in the pericarp of four litchi cultivars during browning. Finding results showed that a total of 119 kinds of metabolites were detected in litchi pericarp, including 30 kinds of primary metabolites, 44 kinds of volatile compounds, 29 kinds of free amino acids and 16 kinds of hydrolytic amino acids. After ANOVA and OPLS-DA, 52 kinds of metabolites were important with predictive VIP > 1 and p < 0.05. In FZX pericarp, the contents of many amino acids increased significantly, which might be related to the yellow-green pericarp and play an important role in delaying browning. In the pericarp of JGHN, NMC and HZ, a great number of soluble sugars and some free amino acids were induced during browning, which was negatively correlated with the browning speed of three red pericarp cultivars. The browning induced a large number of sesquiterpenes in the pericarp of FZX, NMC and HZ, which was positively correlated with the browning index. In addition, the correlation analysis showed that the amino acids were negatively correlated with the volatile compounds, suggesting that pericarp browning could induce the conversion of metabolic products from amino acids to terpenes.


Fruit/chemistry , Litchi/chemistry , Metabolome , Amino Acids/analysis , Food Storage , Plant Proteins/analysis , Sugars/analysis , Volatile Organic Compounds/analysis
11.
Biomolecules ; 9(4)2019 04 24.
Article En | MEDLINE | ID: mdl-31022937

Modification of cell wall polysaccharide in the plant plays an important role in response to fungi infection. However, the mechanism of fungi infection on cell wall modification need further clarification. In this study, the effects of Penicillium italicum inoculation on 'shatangju' mandarin disease development and the potential mechanism of cell wall polysaccharides modification caused by P. italicum were investigated. Compared to the control fruit, P. italicum infection modified the cell wall polysaccharides, indicated by water-soluble pectin (WSP), acid-soluble pectin (ASP), hemicellulose and lignin contents change. P. italicum infection enhanced the activities of polygalacturonase (PG), pectin methylesterase (PME), and the expression levels of xyloglucanendotransglucosylase/hydrolase (XTH) and expansin, which might contribute to cell wall disassembly and cellular integrity damage. Additionally, higher accumulation of reactive oxygen species (ROS) via decreasing antioxidant metabolites and the activities of antioxidant enzymes including superoxide dismutase (SOD), catalase (CAT), and ascorbate peroxidase (APX) also contributed to the cell wall polysaccharides modification. Meanwhile, the gene expression levels of hydroxyproline-rich glycoprotein (HRGP) and germin-like protein (GLP) were inhibited by pathogen infection. Altogether, these findings suggested that cell wall degradation/modification caused by non-enzymatic and enzymatic factors was an important strategy for P. italicum to infect 'shatangju' mandarin.


Cell Wall/metabolism , Citrus/metabolism , Lignin/metabolism , Pectins/metabolism , Penicillium/pathogenicity , Polysaccharides/metabolism , Cell Wall/microbiology , Citrus/microbiology , Glycosyltransferases/genetics , Glycosyltransferases/metabolism , Plant Proteins/genetics , Plant Proteins/metabolism , Polygalacturonase/genetics , Polygalacturonase/metabolism , Reactive Oxygen Species/metabolism
12.
Funct Integr Genomics ; 19(3): 467-486, 2019 May.
Article En | MEDLINE | ID: mdl-30806884

Banana, an important food, incurs significant economic losses due to high storage temperature. Integrative analysis of proteome and transcriptome profiles of the banana peel stored at 20 °C (control) and 30 °C (HT) was used to investigate the molecular mechanism in response to high temperature stress. Critical proteins and genes relating to the response of banana fruit to HT stress were evaluated using partial least squares-discriminant analysis (PLS-DA) and orthogonal signal correction partial least squares-discriminant analysis (OPLS-DA). HT stress influenced proteins/genes related to chlorophyll metabolism, fruit firmness, signal transduction, energy metabolism, and stress response and defense. Together with scanning electron microscopy (SEM) and real time quantitative PCR (RT-qPCR) results, it can be concluded that HT stress resulted in stay-green ripening of banana fruit. Additionally, HT stress accelerated firmness loss and senescence of banana peel, might mainly through regulating hormone signaling pathway, stress protective ability, and energy metabolism in the banana peel. Our study provided a clearer understanding of regulatory mechanisms of HT treatment on banana fruit and potential genetic resources for the improvement of high temperature-tolerant characteristics in banana fruit.


Food, Preserved/standards , Hot Temperature , Musa/metabolism , Proteome/genetics , Transcriptome , Energy Metabolism , Heat-Shock Proteins/genetics , Heat-Shock Proteins/metabolism , Musa/genetics , Plant Proteins/genetics , Plant Proteins/metabolism , Proteome/metabolism
13.
J Sci Food Agric ; 99(5): 2610-2621, 2019 Mar 30.
Article En | MEDLINE | ID: mdl-30417566

BACKGROUND: Ozone treatment can effectively inhibit fruit decay in many fruits during postharvest storage. However, little information is available for pitaya fruit. RESULTS: Ozone treatment significantly reduced the decay rate and induced the enzyme activities of peroxidase and polyphenol oxidase, and also reduced the levels of reactive oxygen species. In total, 103 metabolites were detected and changed the content after ozone treatment, including 54 primary metabolites and 49 aromatic compounds. After significance and importance analysis, 37 metabolites were important. Some metabolites were induced by peel senescence to respond to senescence stress, including d-fructose, d-glucose, mannose, inositol, galactonic acid, ethanedioic acid and stearic acid. Some metabolic products of peel senescence were reduced by ozone treatment, including d-arabinose, glucaric acid, galacturonic acid, 1-hexanol, 4-ethylcyclohexanol, ß-linalool, palmitoleic acid and 2-hydroxy-cyclopentadecanone. Some metabolites induced by ozone treatment might play a vital role in delaying the senescence and decay, including malic acid, succinic acid, pentenoic acid, eicosanoic acid, 2-hexenal, hexanal, 2-heptenal, 4-heptenal, 2-octenal and nitro m-xylene. CONCLUSION: Ozone treatment significantly reduced decay and prolonged shelf-life without reducing fruit quality. In total, 37 metabolites might play an important role in ozone delayed fruit decay. © 2018 Society of Chemical Industry.


Cactaceae/drug effects , Fruit/metabolism , Ozone/pharmacology , Volatile Organic Compounds/chemistry , Aldehydes/analysis , Aldehydes/metabolism , Cactaceae/chemistry , Cactaceae/growth & development , Cactaceae/metabolism , Fruit/chemistry , Fruit/drug effects , Fruit/growth & development , Volatile Organic Compounds/metabolism
14.
Food Chem ; 278: 552-559, 2019 Apr 25.
Article En | MEDLINE | ID: mdl-30583410

The effect of sodium para-aminosalicylate (PAS-Na) on litchi pericarp browning and the potential regulating mechanism was investigated in this study. Results showed that 0.3 g L-1 PAS-Na significantly inhibited the development of pericarp browning and reduced respiration rate of litchi fruit. PAS-Na inhibited the production of reactive oxygen species (ROS) and decreased the expression level of senescence-related genes. Additionally, PAS-Na treatment enhanced the activities of superoxide dismutase (SOD), catalase (CAT) and glutathione peroxidase (GPX), which might contribute to the scavenging of ROS. Meanwhile, PAS-Na treatment maintained membrane integrity as indicated by reduced relative membrane leakage rate and malondialdehyde (MDA) content, as well as lower activities of membrane lipids-degrading enzymes: lipase and lipoxygenase (LOX). Amino acids, especially GABA, Glu, Met contents were also significantly affected by PAS-Na treatment. Taken together, we postulated that PAS-Na treatment might be a promising method for controlling postharvest browning and prolonging shelf-life of harvested litchi fruit.


Aminosalicylic Acid , Food Handling/methods , Fruit , Litchi , Reactive Oxygen Species , Aminosalicylic Acid/chemistry , Aminosalicylic Acid/pharmacology , Fruit/chemistry , Fruit/drug effects , Litchi/chemistry , Litchi/drug effects , Reactive Oxygen Species/analysis , Reactive Oxygen Species/metabolism
15.
Chem Cent J ; 12(1): 131, 2018 Dec 05.
Article En | MEDLINE | ID: mdl-30519833

Banana as a typical climacteric fruit soften rapidly, resulting in a very short shelf life after harvest. Sodium dichloroisocyanurate (NaDCC) is reported to be an effectively antibacterial compound. Here, we investigated the effects of NaDCC on ripening and senescence of harvested banana fruit at physiological and molecular levels. Application of 200 mg L-1 NaDCC solution effectively inhibited the ripening and senescence of banana fruit after harvest. NaDCC treatment reduced greatly ethylene production rate and expressions of genes encoding 1-aminocyclopropane-1-carboxylate synthetase, 1-aminocyclopropane-1-carboxylate oxidase, ethylene-responsive transcription factor and EIN3-binding F-box protein. Meanwhile, NaDCC treatment down-regulated markedly the expressions of xyloglucan endotransglucosylase/hydrolase and pectinesterase genes. Furthermore, NaDCC treatment affected significantly the accumulation of ripening-related primary metabolites such as sugars and organic acids. Additionally, NaDCC treatment decreased the production of hydroxyl radical and increased 1,1-diphenyl-2-picrylhydrazyl (DPPH) scavenging activity, reducing power and hydroxyl radical scavenging activity. In conclusion, NaDCC delayed effectively the ripening and senescence of harvested banana fruit via the reduced ethylene effect and enhanced antioxidant activity.

16.
J Proteomics ; 187: 1-12, 2018 09 15.
Article En | MEDLINE | ID: mdl-29852298

The mechanism of 24-epibrassinolide (EBR)-induced chilling tolerance in harvested banana fruit was investigated. Results showed that EBR pretreatment remarkably suppressed the development of chilling injury (CI) in harvested banana fruit during 12 days of cold storage at 8 °C, as indicated by lower CI index in treated fruit. Physiological measurements exhibited that EBR treatment reduced the relative electrolyte leakage and malondialdehyde (MDA) content while increased the chlorophyll fluorescence (Fv/Fm), total soluble solids (TSS) and ratio of TSS and titratable acidity. Furthermore, the differentially accumulated proteins of banana fruit in response to EBR and cold treatment were investigated by employing gel-based proteomic in combination with MALDI-TOF-TOF MS and LC-ESI-MS/MS analyses. There were fifty five protein spots to be successfully identified. Notably, most of up-regulated proteins by EBR treatment were related to energy biosynthesis, stress response and cell wall modification. In contrast, proteins involved in protein degradation and energy consumption were down-regulated by EBR treatment. These results suggest that EBR treatment could enhance the defense ability, promote the synthesis and utilization of energy, as well as maintain the protein function via enhancing protein biosynthesis and inhibiting protein degradation, consequently contributing to improvement of cold tolerance in harvested banana fruit. SIGNIFICANCE: To extend our understanding of chilling injury (CI) of harvested banana fruit, we reported the effect of 24-epibrassinolide (EBR) on CI of banana fruit when stored at 8 °C. It was the first report on the comprehensive proteomic analysis of banana fruit in response to EBR treatment at low temperature. EBR pretreatment significantly reduced CI in harvested banana fruit. Fifty five protein spots were successfully identified. Notably, the most of up-regulated proteins by EBR treatment were related to energy biosynthesis, stress response and cell wall modification. In contrast, proteins involved in protein degradation and energy consumption were down-regulated. These results suggest that exogenous EBR treatment could enhance the defense ability and maintain high energy status. Meanwhile, EBR treatment maintained protein function via enhancing protein biosynthesis and inhibiting protein degradation. These results may help us to understand the molecular mechanism of the chilling tolerance induced by EBR treatment and broaden the current knowledge of the mechanism of CI of harvested banana fruit.


Adaptation, Physiological , Brassinosteroids/pharmacology , Cold Temperature , Musa , Plant Proteins/metabolism , Proteomics/methods , Steroids, Heterocyclic/pharmacology , Adaptation, Physiological/drug effects , Adaptation, Physiological/physiology , Brassinosteroids/metabolism , Food Handling , Food Storage , Fruit/drug effects , Fruit/metabolism , Musa/drug effects , Musa/metabolism , Steroids, Heterocyclic/metabolism
17.
Food Chem ; 242: 211-216, 2018 Mar 01.
Article En | MEDLINE | ID: mdl-29037680

Okra is a widely accepted vegetable in subtropical and tropical regions due to the good palatability. However, the polysaccharide compositions remain unclear. In this work, the water extract of okra pod was prepared and the leading polysaccharide fraction was purified. The precise structural characteristics were identified. It was a polysaccharide "rhamnogalacturonan" as shown below, and the structure was different to previously reported rhamnogalacturonans. The hypoglycemic effect of rhamnogalacturonan was determined in vivo. By comparing with streptozotocin-induced diabetic mice group, the high-dose group showed decreased blood glucose level and glucose tolerance. The body weight of all groups were not significantly different. The results indicated that the rhamnogalacturonan was responsible for the hypoglycemic effect of okra.


Abelmoschus/chemistry , Hypoglycemic Agents/chemistry , Hypoglycemic Agents/pharmacology , Polysaccharides/chemistry , Polysaccharides/pharmacology , Vegetables/chemistry , Animals , Blood Glucose/metabolism , Body Weight/drug effects , Carbohydrate Sequence , Diabetes Mellitus, Experimental/blood , Diabetes Mellitus, Experimental/drug therapy , Hypoglycemic Agents/therapeutic use , Male , Mice , Polysaccharides/therapeutic use
18.
Front Microbiol ; 8: 2327, 2017.
Article En | MEDLINE | ID: mdl-29250043

Fusarium proliferatum is an important pathogen and causes a great economic loss to fruit industry. Environmental pH-value plays a regulatory role in fungi pathogenicity, however, the mechanism needs further exploration. In this study, F. proliferatum was cultured under two initial pH conditions of 5 and 10. No obvious difference was observed in the growth rate of F. proliferatum between two pH-values. F. proliferatum cultured under both pH conditions infected banana fruit successfully, and smaller lesion diameter was presented on banana fruit inoculated with pH 10-cultured fungi. Proteomic approach based on two-dimensional electrophoresis (2-DE) was used to investigate the changes in secretome of this fungus between pH 5 and 10. A total of 39 differential spots were identified using matrix-assisted laser desorption/ionization tandem time-of-flight mass spectrometry (MALDI-TOF/TOF-MS) and liquid chromatography electrospray ionization tandem mass spectrometry (LC-ESI-MS/MS). Compared to pH 5 condition, proteins related to cell wall degrading enzymes (CWDEs) and proteolysis were significantly down-regulated at pH 10, while proteins related to oxidation-reduction process and transport were significantly up-regulated under pH 10 condition. Our results suggested that the downregulation of CWDEs and other virulence proteins in the pH 10-cultured F. proliferatum severely decreased its pathogenicity, compared to pH 5-cultured fungi. However, the alkaline environment did not cause a complete loss of the pathogenic ability of F. proliferatum, probably due to the upregulation of the oxidation-reduction related proteins at pH 10, which may partially compensate its pathogenic ability.

19.
Tob Induc Dis ; 15: 39, 2017.
Article En | MEDLINE | ID: mdl-29089863

BACKGROUND: Peripheral arterial stiffness gives rise to the high prevalence of peripheral arterial disease (PAD). It is necessary to conduct a large-scale study in Chinese community-dwelling population to clarify the relationships of alcohol and tobacco consumption with peripheral arterial stiffness. Most studies had a small sample size, and were not performed in Chinese community-dwelling population without symptomatic PAD. This analysis was designed to examine the relationships of alcohol and tobacco consumption with peripheral arterial stiffness in Chinese community-dwelling population without symptomatic PAD. METHODS: In a large health check-up program in Beijing (2007-2009), 2624 participants were involved in this analysis, and carotid-radial pulse wave velocity (crPWV) was measured following standard procedure. Physical examinations were performed by well-trained physicians. Blood samples were analyzed by qualified technicians in central laboratory. Initially, either alcohol drinking or cigarette smoking, and then both alcohol drinking and cigarette smoking, were put in one model of multivariate Logistic regression analyses. RESULTS: Median age was 54 years, and median value of crPWV was 9.4 m/s; 51.8% were males, 27.6% were smokers and 30.6% were drinkers. In Logistic regression analyses with either alcohol drinking or cigarette smoking, and both alcohol drinking and cigarette smoking, in one model, cigarette smoking was independently associated with crPWV (P < 0.05 for all), and alcohol drinking was not independently associated with crPWV (P > 0.05 for all). CONCLUSIONS: Cigarette smoking had an independent relationship with peripheral artery stiffness, and there was no independent relationship between alcohol drinking and peripheral arterial stiffness in Chinese community-dwelling population without symptomatic PAD.

20.
Food Res Int ; 78: 274-285, 2015 Dec.
Article En | MEDLINE | ID: mdl-28433293

Litchi fruit (Litchi chinensis Sonn.) is highly perishable after harvest. The shelf life is only 4-6days under ambient temperature storage conditions, which has restricted the development of the litchi industry to a considerable extent. To investigate the molecular mechanisms of litchi fruit senescence, comparative proteomic analysis was carried out on litchi pulp. After two-dimensional gel electrophoresis (2-DE), 64 spots were significantly differentially expressed, 61 of which were successfully identified using liquid chromatography-electrospray ionization-tandem mass spectrometry (LC-ESI-MS/MS). All of the identified proteins were classified according to biological process, molecular function, and cellular component using Blast2GO. Results showed that those proteins were mainly involved in signal transduction, cell wall metabolism, primary and secondary metabolism, energy metabolism. Specifically, many up-regulated proteins were involved in auxin/ethylene regulation, which suggested that auxin and ethylene might cooperate to regulate litchi pulp senescence. Histone deacetylase and DNA methyltransferase might involve the down-regulation of proteins related to reactive oxygen species (ROS) scavenging, glycolysis, tricarboxylic acid cycle, and ATP synthesis in litchi senescence. A higher proportion of differentially expressed proteins were up-regulated and these were involved in a range of processes including cell wall organization or biogenesis, anaerobic respiration, protein degradation, lipid degradation. All of those proteins might accelerate fruit softening, deterioration and senescence. This study is the first to carry out proteomic analysis of the regulation of litchi fruit senescence.

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