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1.
J Bacteriol ; 206(5): e0004824, 2024 05 23.
Article in English | MEDLINE | ID: mdl-38712944

ABSTRACT

Whole genome sequencing has revealed that the genome of Staphylococcus aureus possesses an uncharacterized 5-gene operon (SAOUHSC_00088-00092 in strain 8325 genome) that encodes factors with functions related to polysaccharide biosynthesis and export, indicating the existence of a new extracellular polysaccharide species. We designate this locus as ssc for staphylococcal surface carbohydrate. We found that the ssc genes were weakly expressed and highly repressed by the global regulator MgrA. To characterize Ssc, Ssc was heterologously expressed in Escherichia coli and extracted by heat treatment. Ssc was also conjugated to AcrA from Campylobacter jejuni in E. coli using protein glycan coupling technology (PGCT). Analysis of the heat-extracted Ssc and the purified Ssc-AcrA glycoconjugate by tandem mass spectrometry revealed that Ssc is likely a polymer consisting of N-acetylgalactosamine. We further demonstrated that the expression of the ssc genes in S. aureus affected phage adsorption and susceptibility, suggesting that Ssc is surface-exposed. IMPORTANCE: Surface polysaccharides play crucial roles in the biology and virulence of bacterial pathogens. Staphylococcus aureus produces four major types of polysaccharides that have been well-characterized. In this study, we identified a new surface polysaccharide containing N-acetylgalactosamine (GalNAc). This marks the first report of GalNAc-containing polysaccharide in S. aureus. Our discovery lays the groundwork for further investigations into the chemical structure, surface location, and role in pathogenesis of this new polysaccharide.


Subject(s)
Polysaccharides, Bacterial , Staphylococcus aureus , Staphylococcus aureus/enzymology , Staphylococcus aureus/genetics , Staphylococcus aureus/metabolism , Polysaccharides, Bacterial/chemistry , Polysaccharides, Bacterial/metabolism , Acetylgalactosamine/analysis , Operon , Escherichia coli/genetics , Gene Expression , Cell Wall/chemistry
2.
Nucleic Acids Res ; 49(1): 1-14, 2021 01 11.
Article in English | MEDLINE | ID: mdl-33275144

ABSTRACT

Nucleic acid therapeutics (NATs) have proven useful in promoting the degradation of specific transcripts, modifying gene expression, and regulating mRNA splicing. In each situation, efficient delivery of nucleic acids to cells, tissues and intracellular compartments is crucial-both for optimizing efficacy and reducing side effects. Despite successes in NATs, our understanding of their cellular uptake and distribution in tissues is limited. Current methods have yielded insights into distribution of NATs within cells and tissues, but the sensitivity and resolution of these approaches are limited. Here, we show that nanoscale secondary ion mass spectrometry (NanoSIMS) imaging can be used to define the distribution of 5-bromo-2'-deoxythymidine (5-BrdT) modified antisense oligonucleotides (ASO) in cells and tissues with high sensitivity and spatial resolution. This approach makes it possible to define ASO uptake and distribution in different subcellular compartments and to quantify the impact of targeting ligands designed to promote ASO uptake by cells. Our studies showed that phosphorothioate ASOs are associated with filopodia and the inner nuclear membrane in cultured cells, and also revealed substantial cellular and subcellular heterogeneity of ASO uptake in mouse tissues. NanoSIMS imaging represents a significant advance in visualizing uptake and distribution of NATs; this approach will be useful in optimizing efficacy and delivery of NATs for treating human disease.


Subject(s)
Oligonucleotides, Antisense/analysis , Phosphorothioate Oligonucleotides/analysis , Spectrometry, Mass, Secondary Ion/methods , 3T3-L1 Cells , Acetylgalactosamine/administration & dosage , Acetylgalactosamine/analysis , Animals , Asialoglycoprotein Receptor/analysis , Cesium , HEK293 Cells , HeLa Cells , Humans , Kidney/chemistry , Kidney/ultrastructure , Liver/chemistry , Liver/ultrastructure , Male , Mice , Mice, Inbred C57BL , Microscopy, Electron , Myocardium/chemistry , Myocardium/ultrastructure , Oligonucleotides, Antisense/pharmacokinetics , Phosphorothioate Oligonucleotides/pharmacokinetics , Pseudopodia/chemistry , Pseudopodia/ultrastructure , RNA, Long Noncoding/antagonists & inhibitors , RNA, Long Noncoding/biosynthesis , RNA, Long Noncoding/genetics , Subcellular Fractions/chemistry , Sulfur/analysis , Sulfur Isotopes/analysis , Tissue Distribution
3.
J Dairy Sci ; 104(2): 1433-1444, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33246621

ABSTRACT

Bovine glycomacropeptide (GMP) is a 7,000-Da glycopolypeptide released from κ-casein during cheese making. The O-glycan chains linked to GMP have many biological activities, but their utilization for nutraceutical products is limited due to their low content. To concentrate the functional glycan chains of GMP, we prepared sialylglycopeptide concentrate (SGC) from GMP-containing whey protein concentrate via proteolytic digestion of peptide chains and concentration of sialylglycopeptide by ultrafiltration using membranes with a molecular weight cut-off of 1,000 Da. The abundant saccharides detected in the prepared SGC were N-acetylneuraminic acid (Neu5Ac: 32.3% wt/wt), N-acetylgalactosamine (11.3%), and galactose (10.2%), which constitute O-glycans attached to GMP. The Neu5Ac content in SGC was found concentrated at approximately 4.8-fold of its content in GMP-containing whey protein concentrate (6.8%). Structural analysis of O-glycopeptides by liquid chromatography tandem mass spectrometry identified 88 O-glycopeptides. Moreover, O-acetylated or O-diacetylated Neu5Ac was detected in addition to the previously characterized O-glycans of GMP. Quantitative analysis of O-glycan in SGC by fluorescence labeling of chemically released O-glycan revealed that a disialylated tetrasaccharide was the most abundant glycan (76.6% of the total O-glycan). We further examined bifidogenic properties of SGC in vitro, which revealed that SGC served as a more potent carbon source than GMP and contributes to the growth-promoting effects on certain species of bifidobacteria. Overall, our study findings indicate that SGC contains abundant O-glycans and has a bifidogenic activity. Moreover, the protocol for the preparation of SGC described herein is relatively simple, providing a high yield of glycan, and can be used for large-scale preparation.


Subject(s)
Caseins/chemistry , Glycopeptides/chemistry , Milk/chemistry , Peptide Fragments/chemistry , Polysaccharides/chemistry , Acetylgalactosamine/analysis , Animals , Bifidobacterium/drug effects , Bifidobacterium/growth & development , Cattle , Galactose/analysis , N-Acetylneuraminic Acid/analysis , Oligosaccharides/metabolism , Polysaccharides/isolation & purification , Polysaccharides/pharmacology , Whey Proteins/analysis
4.
Transplant Proc ; 51(5): 1481-1487, 2019 Jun.
Article in English | MEDLINE | ID: mdl-31084922

ABSTRACT

BACKGROUND: Glomerular deposition of IgA1 is a common feature of Henoch-Schönlein purpura nephritis (HSPN) and is indistinguishable from that seen in IgA nephropathy (IgAN). Serum IgA1 is abnormally O-glycosylated in IgA nephropathy, which may contribute to the development of glomerular injury. Abnormal O-glycosylated IgA1 was also detected in HSPN using lectin enzyme-linked immunosorbent assay; however, this method cannot provide the exact structural information of O-glycans. Mass spectrometry is an effective means of quantification of O-glycans, and there is no report to evaluate IgA1 O-glycans in HSPN using mass spectrometry. MATERIALS AND METHODS: We investigated O-glycosylation profile in serum IgA1 from 7 HSPN recipients, 26 IgAN recipients, 25 recipients with other kidney diseases (OKDs), and 26 normal healthy donors using mass spectrometry. RESULTS: Of the 14 GalNac-Gal combinations detected using mass spectrometry, the percentage of the only 6GalNAc-2Gal combination was significantly different between HSPN and IgAN. The percentage of GalNAc 3 in HSPN recipients was significantly higher than that in OKDs recipients and healthy donors (P = .0027 and P < .0001, respectively). Inversely, the percentage of GalNAc 5 in HSPN recipients was significantly lower than that in OKDs recipients and healthy donors (P = .0008, P < .0001, respectively). Moreover, the Gal content and the Gal/GalNAc ratio of HSPN recipients were significantly lower than OKDs recipients and healthy donors. CONCLUSIONS: Examination of Henoch-Schönlein purpura recipients revealed that the number of GalNAc fell and the Gal attachment to GalNAc was reduced compared to other kidney diseases and healthy donors. The IgA1 O-glycosylation profile of HSPN was very similar to that of IgAN.


Subject(s)
IgA Vasculitis/metabolism , Immunoglobulin A/chemistry , Immunoglobulin A/metabolism , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Acetylgalactosamine/analysis , Acetylgalactosamine/metabolism , Female , Glomerulonephritis, IGA/metabolism , Glomerulonephritis, IGA/pathology , Glycosylation , Humans , IgA Vasculitis/pathology , Male
5.
J Am Soc Mass Spectrom ; 29(6): 1242-1249, 2018 06.
Article in English | MEDLINE | ID: mdl-29700727

ABSTRACT

We report distinctive spectroscopic fingerprints of the monosaccharide standards GalNAc4S and GalNAc6S by coupling mass spectrometry and ion spectroscopy in the 3-µm range. The disaccharide standards CSA and CSC are used to demonstrate the applicability of a novel approach for the analysis of sulfate position in GalNAc-containing glycosaminoglycans. This approach was then used for the analysis of a sample containing CSA and CSC disaccharides. Finally, we discuss the generalization of the coupling of mass spectrometry with ion spectroscopy for the structural analysis of glycosaminoglycans on a tetrasaccharide from dermatan sulfate source. Graphical abstract ᅟ.


Subject(s)
Acetylgalactosamine/analogs & derivatives , Glycosaminoglycans/chemistry , Mass Spectrometry/methods , Oligosaccharides/chemistry , Spectrophotometry, Infrared/methods , Acetylgalactosamine/analysis , Chondroitin Sulfates/analysis , Dermatan Sulfate/analysis , Sulfates/analysis
6.
Neural Plast ; 2016: 6021428, 2016.
Article in English | MEDLINE | ID: mdl-26881119

ABSTRACT

Perineuronal nets (PNNs) are extracellular molecules that form around neurons near the end of critical periods during development. They surround neuronal cell bodies and proximal dendrites. PNNs inhibit the formation of new connections and may concentrate around rapidly firing inhibitory interneurons. Previous work characterized the important role of perineuronal nets in plasticity in the visual system, amygdala, and spinal cord of rats. In this study, we use immunohistochemistry to survey the distribution of perineuronal nets in representative areas of the primate brain. We also document changes in PNN prevalence in these areas in animals of different ages. We found that PNNs are most prevalent in the cerebellar nuclei, surrounding >90% of the neurons there. They are much less prevalent in cerebral cortex, surrounding less than 10% of neurons in every area that we examined. The incidence of perineuronal nets around parvalbumin-positive neurons (putative fast-spiking interneurons) varies considerably between different areas in the brain. Our survey indicates that the presence of PNNs may not have a simple relationship with neural plasticity and may serve multiple functions in the central nervous system.


Subject(s)
Acetylgalactosamine/analysis , Brain/metabolism , Extracellular Matrix/metabolism , Neuronal Plasticity , Neurons/metabolism , Animals , Brain/cytology , Extracellular Matrix Proteins/metabolism , Female , Macaca mulatta , Male , Neurons/cytology , Rats , Spinal Cord/cytology , Spinal Cord/metabolism , Synapses/metabolism
7.
Carbohydr Res ; 388: 81-6, 2014 Mar 31.
Article in English | MEDLINE | ID: mdl-24632213

ABSTRACT

Moraxella bovis is a Gram-negative microorganism that causes Infectious Bovine Keratoconjunctivitis (IBK), colloquially known as 'Pink eye' in cattle worldwide. Lipopolysaccharides/lipooligosaccharides are the predominant glycans on the surface of Gram-negative microorganisms. Structural elucidation of the oligosaccharide structure of the rough phenotype of Moraxella bovis strain Epp63 was determined using GC-MS, methylation analysis, and NMR spectroscopy. The oligosaccharide is a branched structure that comprises 10 sugars in addition to KDO. The unusual features of this oligosaccharide include the fact that the oligosaccharide is devoid of heptose. The KDO residue is directly attached to a (→4,6)-branched glucose and additionally contains a terminal open chain acetal-linked N-acetylgalactosamine, (1S)-GalaNAc residue →4,6-linked to a sub-terminal galactose residue.


Subject(s)
Lipopolysaccharides/chemistry , Moraxella bovis/chemistry , Polysaccharides, Bacterial/chemistry , Acetylgalactosamine/analysis , Carbohydrate Sequence , Galactose/analysis , Glucose/analysis , Lipopolysaccharides/isolation & purification , Molecular Sequence Data , Polysaccharides, Bacterial/isolation & purification
8.
Surg Today ; 43(12): 1439-47, 2013 Dec.
Article in English | MEDLINE | ID: mdl-23549931

ABSTRACT

PURPOSE: We performed lectin microarray analyses of islets from wild-type (WT) pigs and α1-3galactosyltransferase gene knockout (GKO) pigs and compared the results with the corresponding values for islets from healthy humans. METHODS: Islets were isolated from the pancreas. After sonication and centrifugation, the proteins in the supernatant from each islet were labeled with Cy3 and applied to a lectin array. RESULTS: Despite negligible expression of the Gal antigen on the adult pig islets (APIs), GKO-islets showed weaker signals, not only for GS-I-B4 but also for PNA, WFA, PTL-I, and GS-I-A4, than the WT islets, indicating reduced contents of α-linked GalNAc and Galß1-3GalNAc. In comparing the islets of pigs vs. humans, human islets showed stronger signals for UEA-I, AAL, TJA-II, EEL, WFA, HPA, DBA, SBA and PTL-I, indicating that besides ABO blood type antigens, high levels of fucose and α-linked GalNAc are present. On the other hand, the high mannose form was very rich in the APIs. CONCLUSION: GKO reduced alpha-linked GalNAc, despite negligible expression of the Gal antigen on WT-API. On the other hand, the high-mannose form was richer in both APIs than in healthy human islets. These results provide useful information for future studies.


Subject(s)
Acetylgalactosamine/analysis , Disaccharides/analysis , Galactans/analysis , Galactosyltransferases/genetics , Islets of Langerhans/metabolism , Lectins , Protein Array Analysis/methods , Animals , Antigens , Cells, Cultured , Gene Knockout Techniques , Humans , Islets of Langerhans/immunology , Mannose , Polysaccharides/immunology , Swine , Transplantation, Heterologous
9.
Biochem Biophys Res Commun ; 428(3): 339-42, 2012 Nov 23.
Article in English | MEDLINE | ID: mdl-23098908

ABSTRACT

Aberrant O-glycosylation in the hinge region of serum IgA is suggested to be involved in the pathogenesis of IgA nephropathy (IgAN), because the hypoglycosylation including N-acetylneuraminic acid or galactose has been reported in the mucin-type O-glycan of the hinge portion (HP) of IgA deposited in the IgAN patients' kidney. These aberrant glycosylation has been assessed in most of the previous reports by qualitative but not quantitative methods. In the present study, the molar ratios of GalNAc or Gal to HP were analyzed for serum IgA from IgAN patients. The GalNAc/HP ratio was increased in the patients who achieved remission after a combination therapy of tonsillectomy and intravenous corticosteroid, suggesting any non-innate factors to affect the IgA O-glycosylation in IgAN that is thought to be inherently determined. Furthermore, the O-glycosylation status was different among three groups: IgAN patients in the pretreatment stage, IgAN patients in the remission stage after treatment and healthy controls. These results indicated that aberrant O-glycosylation of serum IgA in the IgAN patients would be inherently present and, to some extent, affected by therapeutic intervention. Finally, the quantitative change of O-glycan composition is a novel marker of therapeutic response of IgAN.


Subject(s)
Glomerulonephritis, IGA/therapy , Immunoglobulin A/chemistry , Acetylgalactosamine/analysis , Administration, Intravenous , Adolescent , Adrenal Cortex Hormones/administration & dosage , Adult , Biomarkers/blood , Biomarkers/chemistry , Female , Glomerulonephritis, IGA/blood , Glomerulonephritis, IGA/surgery , Glycosylation , Humans , Immunoglobulin A/blood , Male , Polysaccharides/analysis , Tonsillectomy , Young Adult
10.
Eur J Contracept Reprod Health Care ; 16(6): 488-97, 2011 Dec.
Article in English | MEDLINE | ID: mdl-22066892

ABSTRACT

OBJECTIVES: The effects of Anethum graveolens seed extract on fertility of male rats were investigated. METHODS: Male Wistar rats were divided into five groups according to the treatment they received during 42 days: control, low dose (0.5 g/kg) and high dose (5 g/kg) of aqueous extracts, and low dose (0.045 g/kg) and high dose (0.45 g/kg) of ethanol extracts of Anethum graveolens seed. Sperm count and motility and testosterone concentration were measured. Sections of the testes, epididymis, and seminal vesicles were stained with peroxidase-conjugated lectins of Ulex europaeus agglutinin, peanut agglutinin, Dolichos biflorus agglutinin, soy bean agglutinin and concanavalin A. The treated male rats were mated with females and the crown-rump lengths and weights of their newborn pups were measured. RESULTS: No significant differences in sperm count, sperm motility or testosterone concentration were observed in the experimental groups. However, female rats did not become pregnant after mating with rats given the high dose of the ethanol extract. The distribution of terminal sugars on the epithelial surface of the reproductive structures decreased in the experimental groups. CONCLUSION: Anethum graveolens extract decreased fertility rate by modifying some terminal sugars on the cell surface of male reproductive organs involved in sperm maturation, capacitation and oocyte recognition.


Subject(s)
Anethum graveolens , Epididymis/chemistry , Fertility/drug effects , Plant Extracts/pharmacology , Seminal Vesicles/drug effects , Testis/drug effects , Acetylgalactosamine/analysis , Analysis of Variance , Animals , Epididymis/anatomy & histology , Epididymis/drug effects , Female , Fucose/analysis , Galactose/analysis , Litter Size/drug effects , Male , Mannose/analysis , Organ Size/drug effects , Plant Extracts/administration & dosage , Pregnancy , Rats , Rats, Wistar , Seeds , Seminal Vesicles/anatomy & histology , Seminal Vesicles/chemistry , Sperm Count , Sperm Motility/drug effects , Testis/anatomy & histology , Testis/chemistry , Testosterone/blood
11.
Acta Histochem ; 113(8): 815-25, 2011 Dec.
Article in English | MEDLINE | ID: mdl-21774970

ABSTRACT

The aim of the study was to investigate the content and distribution of sugar residues in placentas from pregnancies complicated by hypertensive disorders. Placentas from women with uncomplicated pregnancies (group 1), pregnancies complicated by gestational hypertension (group 2), pregnancies complicated by pre-eclampsia (group 3), pregnancies complicated by pre-eclampsia with HELLP syndrome (hemolysis, elevated liver enzymes and low platelets) (group 4) were collected. Lectins: ConA, WGA, PNA, SBA, DBA, UEA I, GNA, DSA, MAA, SNA, in combination with chemical and enzymatic treatments, were used. Data showed a decrease and/or lack of α-d-mannose, α-d-glucose and d-galactose-(ß1-4)-N-acetyl-d-glucosamine in placentas from pre-eclampsia and pre-eclampsia with HELLP syndrome compared with control and hypertension cases. N-acetyl-d-galactosamine appeared and/or increased in placentas from hypertensive disorders. A different distribution of various types of sialic acid was observed in placentas from hypertensive disorders compared with the controls. In particular, placentas from pre-eclampsia, with and without HELLP syndrome, lacked the acetylated sialic acid side-chain. These findings demonstrate various alterations of the carbohydrate metabolism in the placentas from pregnancies complicated by different types of hypertensive disorders. This indicates correlation with the placental morpho-functional changes characteristic of these complications and with the degree of clinical severity.


Subject(s)
Carbohydrates/analysis , HELLP Syndrome/metabolism , Placenta/metabolism , Pre-Eclampsia/metabolism , Pregnancy/metabolism , Acetylgalactosamine/analysis , Acetylgalactosamine/metabolism , Acetylglucosamine/analysis , Acetylglucosamine/metabolism , Adult , Carbohydrates/chemistry , Disease Progression , Female , Galactose/analysis , Galactose/metabolism , Glucose/analysis , Glucose/metabolism , HELLP Syndrome/pathology , HELLP Syndrome/physiopathology , Humans , Lectins , Mannose/analysis , Mannose/metabolism , Placenta/physiopathology , Pre-Eclampsia/pathology , Pre-Eclampsia/physiopathology
12.
Anat Rec (Hoboken) ; 294(2): 363-71, 2011 Feb.
Article in English | MEDLINE | ID: mdl-21235011

ABSTRACT

Identification of glycans in amphibian testis has shown the existence of N-acetylgalactosamine (GalNAc)-containing carbohydrates. Labeling of the sperm acrosome with GalNAc-binding lectins has allowed the identification of GalNAc-containing glycans in this organelle. Futhermore, this specific labeling of the acrosome has allowed the study of acrosomal biogenesis by lectin histochemistry. However, the testis of Xenopus laevis has never been analyzed by lectin histochemistry to locate GalNAc-containing glycoconjugates. The aim of this work was to elucidate the expression of GalNAc in glycoconjugates of Xenopus testis using five specific lectins. The results showed that most of the lectins labeled the interstitium with variable intensity. However, labeling of the different spermatogenetic germ cell types showed different labeling patterns. Some lectins produced weak or very weak staining in germ cells, for example, horse gram Dolichos biflorus agglutinin, which labeled most of the germ cell types, and lima bean Phaseolus lunatus agglutinin, which weakly labeled only spermatogonia, but did not stain other germ cells. By contrast, Maclura pomifera lectin (MPL) moderately labeled all germ cell types, except mature sperm. Labeling with other lectins was seen only at later stages, suggesting variations involved in the spermatogenetic development. Thus, snail Helix pomatia agglutinin labeled spermatids, but neither spermatogonia nor spermatocytes, while soybean Glycine max agglutinin (SBA) labeled from preleptotene spermatocytes to later stages. The periphery of the acrosome was labeled with MPL and SBA, but no specific labeling of the acrosomal content was seen with any lectin. Thus, the GalNAc-binding lectins that have been used as acrosomal markers in some amphibians cannot be used in Xenopus testis, suggesting that acrosomal glycoconjugates in amphibians are species specific.


Subject(s)
Acetylgalactosamine/metabolism , Glycoconjugates/metabolism , Testis/metabolism , Xenopus laevis/metabolism , Acetylgalactosamine/analysis , Acrosome/metabolism , Animals , Carbohydrate Metabolism , Glycoconjugates/chemistry , Histocytochemistry/methods , Lectins , Male , Spermatozoa/metabolism
13.
J Bacteriol ; 192(16): 4103-10, 2010 Aug.
Article in English | MEDLINE | ID: mdl-20562309

ABSTRACT

We recently reported that the oral mucosal pathogen Porphyromonas gingivalis, through its 67-kDa Mfa1 (minor) fimbria, targets the C-type lectin receptor DC-SIGN for invasion and persistence within human monocyte-derived dendritic cells (DCs). The DCs respond by inducing an immunosuppressive and Th2-biased CD4(+) T-cell response. We have now purified the native minor fimbria by ion-exchange chromatography and sequenced the fimbria by tandem mass spectrometry (MS/MS), confirming its identity and revealing two putative N-glycosylation motifs as well as numerous putative O-glycosylation sites. We further show that the minor fimbria is glycosylated by ProQ staining and that glycosylation is partially removed by treatment with beta(1-4)-galactosidase, but not by classic N- and O-linked deglycosidases. Further monosaccharide analysis by gas chromatography-mass spectrometry (GC-MS) confirmed that the minor fimbria contains the DC-SIGN-targeting carbohydrates fucose (1.35 nmol/mg), mannose (2.68 nmol/mg), N-acetylglucosamine (2.27 nmol/mg), and N-acetylgalactosamine (0.652 nmol/mg). Analysis by transmission electron microscopy revealed that the minor fimbria forms fibers approximately 200 nm in length that could be involved in targeting or cross-linking DC-SIGN. These findings shed further light on molecular mechanisms of invasion and immunosuppression by this unique mucosal pathogen.


Subject(s)
Bacterial Proteins/chemistry , Cell Adhesion Molecules/metabolism , Fimbriae Proteins/chemistry , Glycoproteins/chemistry , Lectins, C-Type/metabolism , Porphyromonas gingivalis/chemistry , Receptors, Cell Surface/metabolism , Virulence Factors/chemistry , Acetylgalactosamine/analysis , Acetylglucosamine/analysis , Amino Acid Sequence , Bacterial Proteins/genetics , Bacterial Proteins/isolation & purification , Bacterial Proteins/metabolism , Fimbriae Proteins/genetics , Fimbriae Proteins/isolation & purification , Fimbriae Proteins/metabolism , Fimbriae, Bacterial/ultrastructure , Fucose/analysis , Gas Chromatography-Mass Spectrometry , Glycoproteins/genetics , Glycoproteins/isolation & purification , Glycoproteins/metabolism , Mannose/analysis , Microscopy, Electron, Transmission , Molecular Sequence Data , Molecular Weight , Porphyromonas gingivalis/genetics , Porphyromonas gingivalis/ultrastructure , Protein Binding , Sequence Analysis, Protein , Tandem Mass Spectrometry , Virulence Factors/genetics , Virulence Factors/isolation & purification , Virulence Factors/metabolism
14.
Article in English | MEDLINE | ID: mdl-20530845

ABSTRACT

Complex mixtures containing O-linked glycopeptides bearing SA(1-0)GalGalNAc structures, or single GalNAc units were subjected to collision-induced dissociation (CID) and electron transfer dissociation (ETD) analysis on a linear ion trap-Orbitrap mass spectrometer and the resulting data was analyzed using the Protein Prospector software. An overview of the structural information provided by the different fragmentation techniques, as well as their limitations, is presented. We illustrate the importance of the complementary information in the mass spectrometry survey scans as well as the different tandem mass spectrometry techniques. We also present some unique features offered by Protein Prospector that are advantageous in glycopeptide analysis: (i) considering a modification that will produce a neutral loss, without "labeling" the original modification site; (ii) merging CID and ETD search results; (iii) permitting the comparison of different modification site-assignments. Although these data were obtained from secreted glycopeptides, the observations and conclusions are also valid for the intracellular regulatory O-GlcNAc modification.


Subject(s)
Glycopeptides/analysis , Mass Spectrometry/methods , Acetylgalactosamine/analysis , Asparagine/analysis , Automation , Chromatography, Liquid/methods , Galactose/analysis , Glycopeptides/chemistry , Glycosylation , Serine/analysis , Threonine/analysis , Tryptophan/analysis
15.
Electrophoresis ; 30(15): 2632-9, 2009 Aug.
Article in English | MEDLINE | ID: mdl-19621375

ABSTRACT

N-linked or O-linked glycans derived from glycoprotein processing carry, an N-acetylglucosamine or an N-acetylgalactosamine respectively, at their reducing termini. The presence of the N-acetylamino group on C-2 of reducing sugar residues has been reported to hamper the derivatization reaction with a chromophore at the anomeric centre. In this paper N-acetyllactosamine, N-acetylglucosamine, N-acetylgalactosamine and several other neutral monosaccharides are coupled to three different dyes (4-aminobenzonitrile, 2-aminopyridine, 2-aminobenzoic acid (2-AA)) by reductive amination and analysed by CE with UV detection. The 2-AA derivatives showed the lowest concentration detection limits, varying approximately in the 2-3 muM range for the saccharides tested including the N-acetamido ones. The possibility to separate and detect with the same sensitivity ten 2-AA-labelled monosaccharides mainly found in mammalian or plant glycoproteins in a single CE run is highlighted. The analysis has been carried out in less than 25 min using the borate-complexation method in CZE mode. The influence of the strength of the acid used as catalyst in the chemical modification of the sugars with 2-AA is also shortly addressed.


Subject(s)
Amino Sugars/analysis , Chromatography, Micellar Electrokinetic Capillary/methods , Electrophoresis, Capillary/methods , Acetylgalactosamine/analysis , Acetylglucosamine/analysis , Aminopyridines/chemistry , Hydrogen-Ion Concentration , Nitriles/chemistry , Reproducibility of Results , Sensitivity and Specificity , ortho-Aminobenzoates/chemistry
16.
J Agric Food Chem ; 57(14): 6029-35, 2009 Jul 22.
Article in English | MEDLINE | ID: mdl-19610201

ABSTRACT

The aim was to compare five techniques commonly used to quantify mucin concentrations in ileal digesta collected from three growing pigs that had been fed a diet in which the sole protein was casein. Ileal mucin output was estimated by the periodic acid-Schiff, ethanol precipitation, and phenol-sulfuric acid methods as 25.1, 19.3, and 20.7 g kg-1 of dry matter intake (DMI), respectively. The mucin concentration estimated from sialic acid was only 5.9 g kg-1 of DMI. On the basis of the concentrations of the hexosamines N-acetylglucosamine and N-acetylgalactosamine, mucin output was estimated as 44.9 g kg-1 pf DMI. Of the five assays studied, the ethanol precipitation, periodic acid-Schiff, phenol-sulfuric acid, and sialic acid methods may considerably underestimate mucin in the digesta, which calls into question the accuracy of all of these approaches. In contrast, the gas chromatography method for the determination of hexosamines gave more information on the type and state of the mucin present.


Subject(s)
Mucins/analysis , Acetylgalactosamine/analysis , Acetylglucosamine/analysis , Amino Acids/analysis , Animals , Caseins/administration & dosage , Caseins/metabolism , Chromatography, Gas , Colorimetry , Diet , Dietary Proteins/administration & dosage , Digestion , False Negative Reactions , Ileum/metabolism , Mucins/metabolism , Sialic Acids/analysis , Swine
17.
Parasitol Int ; 58(2): 171-7, 2009 Jun.
Article in English | MEDLINE | ID: mdl-19269346

ABSTRACT

The human large intestine can harbor two morphologically similar amoebae; the invasive Entamoeba histolytica and the non-invasive Entamoeba dispar. Whereas E. histolytica can produce intestinal and extra-intestinal lesions, E. dispar is present in non-symptomatic carriers. Although biochemical, genetic and proteomic studies have identified clear differences between these Entamoebae, it has become clear that several molecules, once assumed to be involved in tissue destruction, exist in both the virulent and the avirulent species. As surface molecules may play a role in invasion and could therefore determine which amoebae are invasive, we analyzed the glycoconjugate composition of E. histolytica and E. dispar using lectins. There was a significant difference between E. histolytica and E. dispar in the expression of glycoconjugates containing d-mannose and N-acetyl-alpha-D-galactosamine residues, but not between virulent and avirulent strains of E. histolytica. N-glycoconjugates with terminal alpha (1-3)-linked mannose residues participate in the adhesion and subsequent cytotoxicity of E. histolytica to cultured hamster hepatocytes. One of them probably is the Gal/GalNAc lectin.


Subject(s)
Entamoeba histolytica/metabolism , Entamoeba/metabolism , Glycoconjugates/metabolism , Acetylgalactosamine/analysis , Animals , Cell Adhesion , Cells, Cultured , Cricetinae , Entamoeba/classification , Entamoeba/growth & development , Entamoeba/pathogenicity , Entamoeba histolytica/growth & development , Entamoeba histolytica/pathogenicity , Entamoebiasis/parasitology , Entamoebiasis/pathology , Glycoconjugates/chemistry , Hepatocytes/parasitology , Hepatocytes/pathology , Liver Abscess, Amebic/parasitology , Liver Abscess, Amebic/pathology , Mannose/analysis , Virulence
18.
Reprod Domest Anim ; 44(2): 284-94, 2009 Apr.
Article in English | MEDLINE | ID: mdl-18992100

ABSTRACT

Our objective was to characterize epithelial cells lining the epididymal duct (caput, corpus, cauda) of the alpaca using AE1/AE3 cytokeratin antibodies and a battery of different lectins: Con-A, UEA-I, LTA WGA, GSA-II, GSA-IB4, SBA, PNA, ECA, DBA, MAL-II and SNA. Sialidase digestion and deglycosylation pre-treatments were also employed. The principal cells (PCs) along the epididymis showed differences in immunostaining patterns toward keratin antibodies. Lectin histochemistry demonstrated variations in the content and distribution of glycosidic residues of glycoconjugates in different epididymal regions. In particular, staining of the Golgi zone in the epithelial PCs was interpreted as evidence for synthesis and secretion of O- and N-linked oligosaccharides. In the caput, the apical mitochondria-rich cells contained mainly beta-GalNAc, subterminal alpha-GalNAc, alpha-Gal and Neu5Ac alpha2,3Gal residues. Conversely, in the corpus they were particularly rich in alpha-GalNac and beta-Gal-(1-3)-d-GalNAc linked to sialic acid moieties. Basal cells mainly expressed beta-GalNAc and alpha-Gal in the caput, alpha-Gal in the corpus and alpha-Fuc and beta-GalNAc in the cauda. The differences in immunostaining patterns and in lectin histochemistry in the alpaca epididymis reported in this investigation seem to be related to regional differences in function.


Subject(s)
Camelids, New World/anatomy & histology , Epididymis/cytology , Histocytochemistry/veterinary , Immunohistochemistry/veterinary , Lectins , Acetylgalactosamine/analysis , Acetylglucosamine/analysis , Animals , Antibodies , Biotinylation , Carbohydrate Conformation , Carbohydrates/analysis , Epididymis/chemistry , Fucose/analysis , Galactose/analysis , Glucose/analysis , Glycosylation/drug effects , Keratins/analysis , Keratins/immunology , Lectins/metabolism , Male , Mannose/analysis , N-Acetylneuraminic Acid/analysis , Neuraminidase/metabolism
19.
Parasitol Res ; 102(6): 1257-67, 2008 May.
Article in English | MEDLINE | ID: mdl-18311571

ABSTRACT

The existence and localisation of carbohydrate terminals in Enteromyxum scophthalmi stages was investigated at light (LM) and transmission electron microscopes (TEM) using lectin histochemistry techniques, with the aim of contributing to elucidate the participation of carbohydrate-lectin interactions in the parasite invasion and relationships with the fish host. The presence of abundant mannose and/or glucose residues was demonstrated by the intense staining by concanavalin A at both LM and TEM. The staining pattern obtained with soybean agglutinin and Bandeiraea simplicifolia I (BSI) indicated the abundance of N-acetyl-galactosamine and D-galactose at a lesser extent. The lectins wheat germ agglutinin, BSI and Ulex europaeus agglutinin produced weaker marks. Most lectins recognised structures present in both pre-sporogonic and sporogonic stages, though the glycosidic pattern and/or staining intensity varied between developmental stages. No staining was obtained with Sambucus nigra agglutinin. The TEM studies demonstrated glucose-mannose, N-acetyl-glucosamine, N-acetyl-galactosamine and alpha-D-galactose as dominant structures at the parasite membrane and host-parasite interface, suggesting a role in host-parasite interactions. All these terminals were also detected in the mitochondria of P cells and were scant in the S cells and nuclei. In turbot intestine, mannose-glucose terminals and N-acetyl-glucosamine were labelled on the epithelial brush border and in the mucous cells and rodlet cells. The relevance of these findings in relation to the host-parasite interaction is discussed.


Subject(s)
Carbohydrates/analysis , Cnidaria/chemistry , Flatfishes/parasitology , Acetylgalactosamine/analysis , Acetylglucosamine/analysis , Animals , Cell Membrane/chemistry , Cnidaria/cytology , Cnidaria/ultrastructure , Epithelial Cells/chemistry , Galactose/analysis , Glucose/analysis , Host-Parasite Interactions , Intestinal Mucosa/chemistry , Lectins/metabolism , Mannose/analysis , Microscopy , Microscopy, Electron, Transmission , Staining and Labeling/methods
20.
Dig Dis Sci ; 53(8): 2189-94, 2008 Aug.
Article in English | MEDLINE | ID: mdl-18299983

ABSTRACT

PURPOSE: Several investigators, including ourselves, have demonstrated by immunohistochemistry that in malignancy of colon, the tumor cells or cells adjacent to the tumor become reactive with anti-STn monoclonal antibodies, while in normal individuals the colonic cells do not react with anti-STn monoclonal antibodies. In the present study, an anti-STn monoclonal antibody LLU9B4 was generated in the laboratory by immunization of mice with STn extracted from LS174T, along with commercially available B72.3 and B35.5 anti-STn monoclonal antibodies for their sensitivity in staining colon cancer sections. RESULT: The results showed that 83.3% stained positive with 9B4 and 66.6% with B72.3, and there was no staining with B35.5 monoclonal antibody. The positive staining was mainly in the cells adjacent to colon cancer. It was also observed that the staining with LLU9B4 was much more pronounced than with B72.3. CONCLUSION: Our study indicates that these antibodies may at least be more sensitive and specific for colon cancers than the current standard of care, FOBT.


Subject(s)
Acetylgalactosamine/analysis , Antibodies, Monoclonal , Antibodies, Neoplasm , Antigens, Tumor-Associated, Carbohydrate/analysis , Colonic Neoplasms/chemistry , Colonic Polyps/chemistry , Immunohistochemistry/methods , Acetylgalactosamine/immunology , Animals , Antigens, Tumor-Associated, Carbohydrate/immunology , Cell Line, Tumor , Colonic Neoplasms/pathology , Colonic Polyps/pathology , Humans , Mice , Predictive Value of Tests , Sensitivity and Specificity
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