Coastal dunes as drivers of genetic differentiation in the honeypot ant Myrmecocystus baja (Formicidae: Formicinae).

Coastal dunes are unique habitats, threatened by human activities. In biogeographical terms, coastal dunes are habitat islands, being discrete and distinct patches of similar habitat among themselves, separated from each other by a different type of habitat. Furthermore, coastal dunes harbor endemic species, adapted to living solely in the habitats found on specific dune systems. For example, the honeypot ant Myrmecocystus baja is endemic and restricted to coastal dunes of Mexico's Baja California Pacific coast. This ecological and biogeographical scenario led to the questions whether their geographical isolation is reflected in their genetic diversity and structuring, and how their demographic history is related with the formation of the dune system habitats. To answer these questions, population genetic, isolation-with-migration, and phylogeographical analyses were carried out, based on mitochondrial and five nuclear intronic markers. Minimal gene flow was detected only between two of the dune systems sampled; otherwise, the M. baja populations were found to be isolated and genetically structured, and their divergence generally pre-dated the modern-day dune systems. It is therefore highly likely that these ants were already present in paleodunes and that each of the populations was established from founder populations as the dunes formed. These findings highlight the importance of coastal dunes for species such as the honeypot ant from Baja California, in promoting genetic differentiation.

Tracing the genealogy origin of geographic populations based on genomic variation and deep learning.

Assigning a query individual animal or plant to its derived population is a prime task in diverse applications related to organismal genealogy. Such endeavors have conventionally relied on short DNA sequences under a phylogenetic framework. These methods naturally show constraints when the inferred population sources are ambiguously phylogenetically structured, a scenario demanding substantially more informative genetic signals. Recent advances in cost-effective production of whole-genome sequences and artificial intelligence have created an unprecedented opportunity to trace the population origin for essentially any given individual, as long as the genome reference data are comprehensive and standardized. Here, we developed a convolutional neural network method to identify population origins using genomic SNPs. Three empirical datasets (an Asian honeybee, a red fire ant, and a chicken datasets) and two simulated populations are used for the proof of concepts. The performance tests indicate that our method can accurately identify the genealogy origin of query individuals, with success rates ranging from  93 % to 100 %. We further showed that the accuracy of the model can be significantly increased by refining the informative sites through FST filtering. Our method is robust to configurations related to batch sizes and epochs, whereas model learning benefits from the setting of a proper preset learning rate. Moreover, we explained the importance score of key sites for algorithm interpretability and credibility, which has been largely ignored. We anticipate that by coupling genomics and deep learning, our method will see broad potential in conservation and management applications that involve natural resources, invasive pests and weeds, and illegal trades of wildlife products.

Draft genome assemblies of the ponerine ant Odontoponera transversa and the carpenter ant Camponotus friedae (Hymenoptera: Formicidae).

OBJECTIVES: Ants are ecologically dominant insects in most terrestrial ecosystems, with more than 14,000 extant species in about 340 genera recorded to date. However, genomic resources are still scarce for most species, especially for species endemic in East or Southeast Asia, limiting the study of phylogeny, speciation and adaptation of this evolutionarily successful animal lineage. Here, we assemble and annotate the genomes of Odontoponera transversa and Camponotus friedae, two ant species with a natural distribution in China, to facilitate future study of ant evolution. DATA DESCRIPTION: We obtained a total of 16 Gb and 51 Gb PacBio HiFi data for O. transversa and C. friedae, respectively, which were assembled into the draft genomes of 339 Mb for O. transversa and 233 Mb for C. friedae. Genome assessments by multiple metrics showed good completeness and high accuracy of the two assemblies. Gene annotations assisted by RNA-seq data yielded a comparable number of protein-coding genes in the two genomes (10,892 for O. transversa and 11,296 for C. friedae), while repeat annotations revealed a remarkable difference of repeat content between these two ant species (149.4 Mb for O. transversa versus 49.7 Mb for C. friedae). Besides, complete mitochondrial genomes for the two species were assembled and annotated.

Development of a lexicon for the sensory description of edible insects commercially available in Australia.

Sensory lexicons provide an important tool for describing the sensory properties of emerging, unfamiliar foods such as edible insects. This study sought to establish and validate a sensory lexicon for the description and differentiation of edible insects commercially available in Australia and prepared using common preservation and cooking methods (freeze-drying, hot-air drying, roasting, sautéing and deep-frying). Five species were evaluated, including house crickets (Acheta domesticus), yellow mealworm larvae (Tenebrio molitor), king mealworm larvae (Zophobas morio), tyrant ants (Iridomyrmex spp.) and green tree ants (Oecophylla smaragdina). Following generic descriptive sensory analysis methods, a trained panel (n=8) developed a sensory lexicon of 29 aroma and flavour descriptors, and 16 texture descriptors. Vocabulary were then categorised and ordered to generate a sensory wheel. Due to a lack of cross-over in sensory attributes between species, sub-categories of species-specific vocabulary were also generated for each insect. The lexicon enabled sensory profiling of commercially available edible insect samples which revealed large variation in aroma, flavour, and texture attributes due to both species and preparation method. This work provides a platform for development of a globally relevant edible insect sensory lexicon. International collaboration will enable expansion of the lexicon for use with other insect species and preparation methods, insect-derived ingredients (such as insect powder, defatted insect powder and textured insect protein) and in different cultural settings. As the industry grows, the applicability of vocabulary for differentiating within species and between competitive products should also be assessed.

Taxon-dependent diversity response along a temperate elevation gradient covered by grassland.

Elevational gradients constitute excellent systems for understanding the mechanisms that generate and maintain global biodiversity patterns. Climatic gradients associated with elevation show strong influence on species distribution in mountains. The study of mountains covered by the same habitat type is an ideal scenario to compare alternatives to the energy hypotheses. Our aim was to investigate how changes in climatic conditions along the elevational gradient drive α- and ß-diversity of four taxa in a mountain system located within a grassland biome. We sampled ants, spiders, birds and plants, and measured climatic variables at six elevational bands (with 10 sampling sites each) established between 470 and 1,000 masl on a mountain from the Ventania Mountain System, Argentina. Species richness per site and ß-diversity (turnover and nestedness) between the lowest band and upper sites were estimated. For most taxa, species richness declined at high elevations and energy, through temperature, was the major driver of species richness for ants, plants and birds, prevailing over productivity and water availability. The major ß-diversity component was turnover for plants, spiders and birds, and nestedness for ants. The unique environmental conditions of the upper bands could favour the occurrence of specialist and endemic species.

Prolonged faunal turnover in earliest ants revealed by North American Cretaceous amber.

All ∼14,000 extant ant species descended from the same common ancestor, which lived ∼140-120 million years ago (Ma).1,2 While modern ants began to diversify in the Cretaceous, recent fossil evidence has demonstrated that older lineages concomitantly occupied the same ancient ecosystems.3 These early-diverging ant lineages, or stem ants, left no modern descendants; however, they dominated the fossil record throughout the Cretaceous until their ultimate extinction sometime around the K-Pg boundary. Even as stem ant lineages appear to be diverse and abundant throughout the Cretaceous, the extent of their longevity in the fossil record and circumstances contributing to their extinction remain unknown.3 Here we report the youngest stem ants, preserved in ∼77 Ma Cretaceous amber from North Carolina, which illustrate unexpected morphological stability and lineage persistence in this enigmatic group, rivaling the longevity of contemporary ants. Through phylogenetic reconstruction and morphometric analyses, we find evidence that total taxic turnover in ants was not accompanied by a fundamental morphological shift, in contrast to other analogous stem extinctions such as theropod dinosaurs. While stem taxa showed broad morphological variation, high-density ant morphospace remained relatively constant through the last 100 million years, detailing a parallel, but temporally staggered, evolutionary history of modern and stem ants.

Riqueza y diversidad de hormigas (Hymenoptera: Formicidae) según uso de suelo en dos paisajes agroforestales de Colombia / Richness and diversity of ants (Hymenoptera: Formicidae) according to land use in two agroforestry landscapes of Colombia

Introducción: Las hormigas cumplen funciones ecológicas importantes en muchos ecosistemas, y son altamente sensibles a los cambios en el uso del suelo. Sin embargo, la respuesta ante estos cambios está poco documentada, a grandes escalas espaciales y en distintos usos de suelo, en ecosistemas poco estudiados como la Serranía del Perijá. Objetivo: Analizar la riqueza, diversidad y composición de las comunidades de hormigas en cuatro usos de suelo de dos paisajes agroforestales de la Serranía del Perijá, Cesar, Colombia. Métodos: En dos paisajes agroforestales (compensación y no compensación) se delimitaron dos ventanas de muestreo de 4 × 4 km. Dentro de cada ventana y paisaje se escogieron cuatro usos de suelo: bosques, sistemas agroforestales de café, regeneración natural y pastizales, en los cuales se aplicaron dos métodos de captura: trampas Pitfall y sacos Winkler. Se midieron seis variables ambientales: cobertura de dosel, altura de la hojarasca, densidad aparente, temperatura, humedad y dureza del suelo. El esfuerzo de muestreo fueron 384 trampas Pitfall y 192 m2 de extracción de hojarasca. El trabajo de campo se realizó entre febrero y marzo de 2021. Resultados: Las hormigas mostraron alta sensibilidad a los cambios en el uso del suelo. La diversidad y riqueza de especies disminuyó en los usos de suelo con menor cobertura vegetal natural, como los pastizales; mientras que los bosques, en ambos paisajes, conservaron la mayor riqueza de especies. La cobertura de dosel y la disponibilidad de hojarasca fueron los parámetros ambientales que favorecieron la diversidad y riqueza de las comunidades de hormigas en todos los usos de suelo. No se encontraron diferencias entre la composición de hormigas de los dos paisajes estudiados. Conclusiones: Las hormigas responden a los cambios de uso de suelo y en particular a la cobertura vegetal. Se confirmó nuestra hipótesis puesto que los usos de suelo con alta cobertura vegetal fueron los hábitats con mayor riqueza y diversidad de hormigas. La heterogeneidad ambiental, producto de la dinámica de transformación de los paisajes es un elemento que debe considerarse en futuras investigaciones.

Introduction: Ants fulfill important ecological functions in many ecosystems and are highly sensitive to changes in land use. However, the response to these changes is poorly documented, at large spatial scales and in different land uses, in poorly studied ecosystems such as the Serranía del Perijá. Objective: To analyze the richness, diversity, and composition of ant communities in four land uses of two agroforestry landscapes of the Serranía del Perijá, Cesar, Colombia. Methods: Two sampling windows of 4 × 4 km were delimited in two agroforestry landscapes (compensation and non-compensation). In each window and landscape four land uses were chosen: forests, coffee agroforestry systems, natural regeneration and pastures, in which two trapping methods were applied: Pitfall traps and Winkler bags. Six environmental variables were measured: canopy cover, leaf litter height, bulk density, temperature, humidity and soil hardness. The sampling effort was 384 Pitfall traps and 192 m2 of leaf litter extraction. The fieldwork was conducted between February and March 2021. Results: Ants showed high sensitivity to changes in land use. Species diversity and richness decreased in land uses with less natural vegetation cover, such as pastures; while forests, in both landscapes, retained the highest species richness. Canopy cover and leaf litter availability were the environmental parameters that favored the diversity and richness of ant communities in all land uses. No differences were found between the ant composition of the two landscapes studied. Conclusions: Ants respond to changes in land use, particularly to vegetation cover. Our hypothesis was confirmed since land uses with high vegetation cover were the habitats with the greatest richness and diversity of ants. Environmental heterogeneity, a product of the dynamics of landscape transformation, is an element that should be considered in future research.

Cold comfort: metabolic rate and tolerance to low temperatures predict latitudinal distribution in ants.

Metabolic compensation has been proposed as a mean for ectotherms to cope with colder climates. For example, under the metabolic cold adaptation and the metabolic homeostasis hypotheses (MCA and MHH), it has been formulated that cold-adapted ectotherms should display both higher (MCA) and more thermally sensitive (MHH) metabolic rates (MRs) at lower temperatures. However, whether such compensation can truly be associated with distribution, and whether it interplays with cold tolerance to predict species' climatic niches, remains largely unclear despite broad ecological implications thereof. Here, we teased apart the relationship between MRs, cold tolerance and distribution, to test the MCA/MHH among 13 European ant species. We report clear metabolic compensation effects, consistent with the MCA and MHH, where MR parameters strongly correlated with latitude and climatic factors across species' distributions. The combination of both cold tolerance and MRs further upheld the best predictions of species' environmental temperatures and limits of northernmost distribution. To our knowledge, this is the first study showing that the association of metabolic data with cold tolerance supports better predictive models of species' climate and distribution in social insects than models including cold tolerance alone. These results also highlight that adaptation to higher latitudes in ants involved adjustments of both cold tolerance and MRs, to allow this extremely successful group of insects to thrive under colder climates.

Ant diversity (Hymenoptera: Formicidae) in Turvo State Park, municipality of Derrubadas, state of Rio Grande do Sul, Brazil / Diversidade de formigas (Hymenoptera: Formicidae) no Parque Estadual do Turvo, Derrubadas, Rio Grande do Sul, Brasil

The knowledge of ant assemblages that occurs in Conservation Units in the Atlantic Forest domain is a priority, considering the number of endemic species and the impacts that this biome has been suffering. The aim of this study was to evaluate ant assemblages in the Turvo State Park, which is the largest conservation unit in the State of Rio Grande do Sul and presents an important role on biodiversity protection. Two samplings were conducted in 2019, one in the summer (January) and the other in the spring (November and December), at five sites 2 km apart, with pitfall traps (soil and canopy), sardine baits, glucose, beating net, sweeping net and manual collection. We sampled 121 species in the summer and 120 in the spring, totaling 163 ant species. A total of 78 species (47.8%) occurred in both sampling seasons. The richest genera in the study were Camponotus (S = 30), Pheidole (S = 23) and Linepithema (S = 11). Seventeen species were recorded for the first time for Rio Grande do Sul state. The results indicate that this is one of the most species-rich assemblages of ants ever surveyed in a conservation unit in southern Brazil. The study highlights the importance of Conservation Units as protected environments against habitat loss for ant biodiversity. The results of this study contribute to myrmecofauna knowledge and serve as a basis for environmental impact studies, management plans and conservation of Atlantic Forest remnants.

O conhecimento das assembleias de formigas que ocorrem em Unidades de Conservação no domínio Mata Atlântica é prioritário, considerando-se o número de espécies endêmicas e os impactos que este bioma vem sofrendo. O objetivo desse trabalho foi caracterizar a assembleia de formigas que ocorre no Parque Estadual do Turvo, a maior unidade de conservação do Rio Grande do Sul que se destaca pelo seu papel na proteção da biodiversidade da Mata Atlântica austral. Foram realizadas duas amostragens no ano de 2019, uma no verão (janeiro) e a outra na primavera (novembro e dezembro), em cinco pontos distantes 2 km entre si, com armadilhas pitfall (solo e dossel), iscas de sardinha, iscas de glicose, guarda-chuva entomológico, rede de varredura e coleta manual. A riqueza amostrada no verão foi de 121 e na primavera de 120, totalizando 163 espécies. Ao todo, 78 espécies (47,8%) ocorreram concomitantemente nas duas amostragens. Os gêneros mais ricos foram Camponotus (S=30), Pheidole (S=23) e Linepithema (S=11). Dezessete espécies foram registradas pela primeira vez para o estado do Rio Grande do Sul. Os resultados se constituem em uma das mais ricas assembleias de formigas já inventariadas em uma unidade de conservação na região sul do Brasil. O estudo destaca a importância das Unidades de Conservação como ambientes protegidos contra a perda de habitat para a biodiversidade de formigas. Os resultados deste estudo contribuem para o conhecimento da mirmecofauna e servem como base para estudos de impacto ambiental, planos de manejo e conservação de remanescentes da Mata Atlântica.

Nest architecture and colony composition in two populations of Ectatomma ruidum sp. 2 (E. ruidum species complex) in southwestern Colombia.

Nest architecture plays a fundamental role in the adaptation of ants to their habitat, favoring the action of economically important species. Ectatomma ruidum sp. 2 (ruidum species complex) is a biological control agent in Neotropical agroecosystems, exhibiting high bioturbation impact due to high nest densities. The architecture and composition of 152 nests were studied in two Andean populations of southwestern Colombia, 24 of them being cast using the paraffin wax technique. Nest entrance was a single, circular, 4 mm hole at ground level, without any special external structure, connected to a single vertical tunnel communicating with successive half ellipsoidal chambers. Nests were extremely shallow (depth range: 28.7-35.4 cm), with an average of six chambers and an overall volume of 92.2 cm3 per nest. The deeper the chamber, the smaller its volume. Nest building was independent of plants or roots, and no surface or underground physical connections were found between neighboring nests. Few nests possessed a queen, and neither ergatoids nor microgynes were recorded. Despite significant interactions between localities and the number of both males and workers, queen presence had an overall highly positive effect on the number of workers and larvae and a negative one on the number of gynes. Overall, the studied Colombian populations of E. ruidum sp. 2 retained the simple nest structure described for other species of this species complex and for colonies of the same species from other geographical areas, though they constrasted in their extreme shallowness. Our data suggest that E. ruidum sp. 2, at the local level, does not follow the usual monodomic pattern of this species with facultative polygyny but, rather, has a polydomic pattern with monogyny, perhaps related to the extreme shallowness of the nests due to soil structure, which could significantly enhance the queen's reproductive inhibition previously reported for this species.

Ants of the State of Par, Brazil: a historical and comprehensive dataset of a key biodiversity hotspot in the Amazon Basin.

The state of Par in northern Brazil is located entirely within the Amazon Basin and harbors a great diversity of landscape and vegetation types that support high levels of biodiversity. Here, we provide a comprehensive inventory of ant species and their distribution in Par. This regional list is based on an extensive review of species records from published and unpublished sources covering a period of 134 years (18862020) and includes the five most representative ant collections in Brazil. In total, we documented 12 subfamilies, 90 genera and 753 ant species, including 97 species recorded for the first time in Par and 12 species newly reported in Brazil. Sampling effort across the state is highly uneven, and most records may be associated with research areas near the state capital, mining areas, hydroelectric dams, and research field stations run by the state or universities. In addition, our results suggest a strong bias in ant collection in Par in terms of proximity of sampled sites to access routes, such as roads and rivers. We also found that species records were highly unevenly distributed based on areas of endemism within the Amazon, vegetation type, and protected areas within the state. Ant surveys are still lacking from most protected areas of Par, and further sampling is urgently needed in view of the current trend of expansion of major infrastructure projects and natural resource harvesting within protected areas of Par. Our database represents an extremely valuable and rich source of information for further studies on ant biodiversity and conservation in the Amazon Basin.

Possible impacts of the predominant Bacillus bacteria on the Ophiocordyceps unilateralis s. l. in its infected ant cadavers.

Animal hosts infected and killed by parasitoid fungi become nutrient-rich cadavers for saprophytes. Bacteria adapted to colonization of parasitoid fungi can be selected and can predominate in the cadavers, actions that consequently impact the fitness of the parasitoid fungi. In Taiwan, the zombie fungus, Ophiocordyceps unilateralis sensu lato (Clavicipitaceae: Hypocreales), was found to parasitize eight ant species, with preference for a principal host, Polyrhachis moesta. In this study, ant cadavers grew a fungal stroma that was predominated by Bacillus cereus/thuringiensis. The bacterial diversity in the principal ant host was found to be lower than the bacterial diversity in alternative hosts, a situation that might enhance the impact of B. cereus/thuringiensis on the sympatric fungus. The B. cereus/thuringiensis isolates from fungal stroma displayed higher resistance to a specific naphthoquinone (plumbagin) than sympatric bacteria from the environment. Naphthoquinones are known to be produced by O. unilateralis s. l., and hence the resistance displayed by B. cereus/thuringiensis isolates to these compounds suggests an advantage to B. cereus/thuringiensis to grow in the ant cadaver. Bacteria proliferating in the ant cadaver inevitably compete for resources with the fungus. However, the B. cereus/thuringiensis isolates displayed in vitro capabilities of hemolysis, production of hydrolytic enzymes, and antagonistic effects to co-cultured nematodes and entomopathogenic fungi. Thus, co-infection with B. cereus/thuringiensis offers potential benefits to the zombie fungus in killing the host under favorable conditions for reproduction, digesting the host tissue, and protecting the cadaver from being taken over by other consumers. With these potential benefits, the synergistic effect of B. cereus/thuringiensis on O. unilateralis infection is noteworthy given the competitive relationship of these two organisms sharing the same resource.

Functional composition of ant assemblages in habitat islands is driven by habitat factors and landscape composition.

Fragmented natural habitats within human-transformed landscapes play a key role in preserving biodiversity. Ants as keystone species are essential elements of terrestrial ecosystems; thus, it is important to understand the factors influencing their presence. In a large-scale multi-site study, we surveyed ant assemblages using sweep netting and D-vac sampling on 158 ancient burial mounds preserving grassland habitats in agricultural landscapes in East-Hungary. We asked the following questions: (1) How do habitat factors and landscape composition affect species richness and functional diversity of ants? (2) Which ant traits are affected by habitat factors and landscape composition? Despite their small sizes, mounds as permanent and relatively undisturbed landscape elements could provide safe havens for diverse ant assemblages even in transformed agricultural landscapes. The complex habitat structure of wooded mounds supported high species and functional diversity of ant assemblages. Ant species on wooded mounds had small or medium-sized colonies, enabling the co-existence of more species. The effect of landscape composition on ant assemblages was mediated by habitat factors: steep slopes buffered the negative effect of the cropland matrix and enabled higher ant diversity.

Patterns of Ant Diversity in the Natural Grasslands of Southern Brazil.

In the south of Brazil, grasslands are naturally widespread over two different biomes, the Pampa in the southernmost region and within the Atlantic Forest in the northern portions. The natural grasslands of the state of Paraná comprise a very particular physiognomy composed of two distinct formations: the Campos Gerais and the grasslands of the southwest. The first is located in the edge of the second plateau of Paraná state, comprising a great diversity of environments. The grasslands of the southwest are more homogeneous, with a continuous herbaceous stratum dominating the landscape. In this context, the aim of this study was to evaluate the patterns of species richness and composition of ants, an ecologically prominent group, along the natural grasslands of Paraná. We also intended to compare the faunal similarity between the two different grassland formations. For that, four different Conservation Unities were sampled along a latitudinal gradient. A remarkable total of 245 ant species was recorded, and the results indicate that species richness decreases as latitude increases along the grasslands of Paraná. There were clear differences in species composition between these two grasslands formations, given the significative number of endemic species in each of these two grassland formations. Ten species were recorded for the first time in the state of Paraná, of which three also for the first time in the Southern Region of Brazil. Overall, our study contributes to a better understanding about the diversity and composition of ant communities in subtropical grasslands.

Description of two new species of ants of the genus Myrmecina Curtis, 1829 (Hymenoptera: Formicidae: Myrmicinae) from the Eastern Himalayas.

Two new species of the ant genus Myrmecina Curtis, 1829, M. bawai sp. nov. and M. reticulata sp. nov., are described and illustrated based on the worker caste from Mizoram, Northeast India. The genus is reported for the first time from Mizoram, the Indian state with the highest percentage of forest cover. A key to the Indian fauna of Myrmecina is also provided based on the worker caste.

First record of the myrmicine ant genus Syllophopsis Santschi, 1915 (Hymenoptera: Formicidae) from India with description of a new species.

Here we describe and illustrate Syllophopsis peetersi sp. nov. from Silent Valley National Park, a biodiversity hotspot region of the Western Ghats of India. The discovery also marks a first native report of the genus from the Indian subcontinent. Scanning Electron Microscopy (SEM) analysis was carried out to elucidate the general morphology and sensilla of the new species. The new species is similar to congeners from Madagascar, but with larger differences from species that occur elsewhere.

Myrmecotypus haddadi sp. nov.-a new species of ant resembling sac spider from the Bolivian orocline (Araneae: Corinnidae: Castianeirinae).

A new species of ant resembling sac spider of the subfamily Castianeirinae, Myrmecotypus haddadi sp. nov. is described from the Sub-Andean area at the Bolivian orocline. The species was collected from low herbaceous vegetation along the edges of the Chiquitano and Cerradao forest.