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1.
Mikrochim Acta ; 191(10): 602, 2024 09 16.
Article in English | MEDLINE | ID: mdl-39284945

ABSTRACT

A fluorescent and photoelectrochemical (PEC) dual-mode biosensor based on target biorecognition-triggered cyclic amplification was constructed for Kana detection. With the assistance of the catalyzed reaction of exonuclease III, a Kana-aptamer DNA duplex was designed for conducting the cyclic release of G-rich DNA sequence as well as output DNA S2. The released G-rich sequence triggers the fluorescence (FL) of thioflavin T (ThT), the intensity of which is positively correlated with the Kana concentration. The linear range is 0.2 to 30 nM, and the detection limit reaches 0.07 nM. Simultaneously, the released output DNA S2 was captured by Fe3O4@CdTe-probe ssDNA and then combined with methylene blue to realize the transduction of polarity-reversed PEC signal, leading to the sensitive detection of Kana with a linear range of 0.2 to 40 nM and a calculated detection limit of 0.2 nM. The outstanding performance endows the dual-mode biosensor a promising prospect for practical application.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , Exodeoxyribonucleases , Kanamycin , Limit of Detection , Exodeoxyribonucleases/chemistry , Biosensing Techniques/methods , Kanamycin/analysis , Electrochemical Techniques/methods , Electrochemical Techniques/instrumentation , Aptamers, Nucleotide/chemistry , Spectrometry, Fluorescence/methods , Fluorescent Dyes/chemistry
2.
Talanta ; 279: 126676, 2024 Nov 01.
Article in English | MEDLINE | ID: mdl-39121550

ABSTRACT

The abuse of kanamycin (KAN) poses an increasing threat to human health by contaminating agricultural and animal husbandry products, drinking water, and more. Therefore, the sensitive detection of trace KAN residues in real samples is crucial for monitoring agricultural pollution, ensuring food safety, and diagnosing diseases. However, traditional assay techniques for KAN rely on bulky instruments and complicated operations with unsatisfactory detection limits. Herein, we developed a novel label-free aptasensor to achieve ultrasensitive detection of KAN by constructing mesoporous DNA-cobalt@carbon nanofibers (DNA-Co@C-NFs) as the recognizer. Leveraging the extended π-conjugation structure, prominent surface area, and abundant pores, the Co@C-NFs can effectively load aptamer strands via π-π stacking interactions, serving as KAN capturer and reporter. Due to the change in DNA configuration upon binding KAN, this aptasensor presented an ultralow detection limit and ultra-wide linear range, along with favorable precision and selectivity. Using real tap water, milk, and human serum samples, the aptasensor accurately reported trace KAN levels. As a result, this convenient and rapid autosensing technique holds promise for onsite testing of other antibiotic residues in agriculture, food safety, and clinical diagnosis.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Carbon , Cobalt , DNA , Kanamycin , Nanofibers , Nanofibers/chemistry , Kanamycin/analysis , Aptamers, Nucleotide/chemistry , DNA/chemistry , Humans , Porosity , Biosensing Techniques/methods , Cobalt/chemistry , Carbon/chemistry , Milk/chemistry , Limit of Detection , Animals , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Drinking Water/analysis , Drinking Water/chemistry
3.
Mikrochim Acta ; 191(9): 544, 2024 08 19.
Article in English | MEDLINE | ID: mdl-39158765

ABSTRACT

As a kind of aminoglycoside antibiotics, kanamycin (KAN) is widely applied to animal husbandry and aquaculture. However, the abuse of KAN causes the large-scale discharge of it into rivers, lakes and groundwater, which threatens environmental safety and human health. Therefore, it is imperative to develop a method that is applicable to detect KAN in an efficient and accurate way. The colorimetric method based on enzymes provides a feasible solution for the detection of organic pollutants. However, the extensive application of natural enzymes is constrained by high cost and low stability. Herein, a polyoxometalate-based nanozyme, namely [H7SiW9V3O40(DPA)3]·4H2O (SiW9V3/DPA) (DPA = dipyridylamine), is synthesized. As a low-cost nanozyme with high stability compared to natural enzymes, SiW9V3/DPA performs well in laccase-mimicking activity. It can be used to induce chromogenic reaction between 2,4-dichlorophenol (2,4-DP) and 4-aminoantipyrine (4-AP), which generates red products. With the addition of KAN, the color fades. That is to say, KAN can be detected with colorimetric assay in the concentration range 0.1 to 100 µM with high selectivity and low limit of detection (LOD) of 6.28 µM. Moreover, SiW9V3/DPA is applied to KAN detection in lake and river water and milk with satisfactory results. To sum up, polyoxometalate-based nanozyme is expected to provide a promising solution to the detection of organic pollutants in the aquatic environment.


Subject(s)
Colorimetry , Kanamycin , Laccase , Ampyrone/chemistry , Biomimetic Materials/chemistry , Colorimetry/methods , Kanamycin/analysis , Laccase/chemistry , Laccase/metabolism , Limit of Detection , Tungsten Compounds/chemistry , Water Pollutants, Chemical/analysis
4.
Mikrochim Acta ; 191(9): 561, 2024 08 24.
Article in English | MEDLINE | ID: mdl-39180707

ABSTRACT

A novel "turn-on" aptasensor for kanamycin (Kana) detection based on a new Förster resonance energy transfer (FRET) pair is reported. A new organic small molecule was employed as a high-efficiency quencher for fluorophore. Based on specific interactions between ssDNA and the quencher, an ingenious and amplified strategy was designed. In the absence of the target, the fluorescence of the fluorophore labeled at the end of the aptamer was quenched. After the binding of the aptamer to the target, the fluorescence was recovered and amplified. The proposed aptasensor showed high specificity, selectivity, and stability in complicated systems. With the P3-based strategy, the limit of detection for Kana is estimated to be 10 nM, which is much lower than the maximum allowable concentration in milk. The recoveries of spiked Kana in milk were in the range 99.8 ~ 105.3% (n = 3). Fortunately, this novel method can be easily extended to other antibiotics such as tobramycin by simply replacing the aptamer, showing great potential as a universal platform for selective, sensitive, and rapid detection of hazardous analytes in food samples.


Subject(s)
Anti-Bacterial Agents , Aptamers, Nucleotide , Biosensing Techniques , Fluorescence Resonance Energy Transfer , Fluorescent Dyes , Kanamycin , Limit of Detection , Milk , Aptamers, Nucleotide/chemistry , Fluorescence Resonance Energy Transfer/methods , Anti-Bacterial Agents/analysis , Kanamycin/analysis , Milk/chemistry , Animals , Fluorescent Dyes/chemistry , Biosensing Techniques/methods , Food Contamination/analysis , DNA, Single-Stranded/chemistry
5.
Anal Chim Acta ; 1320: 343015, 2024 Sep 01.
Article in English | MEDLINE | ID: mdl-39142786

ABSTRACT

Excessive use of antibiotics will enter the water environment and soil through the biological chain, and then transfer to the human body through food, resulting in drug resistance, kidney toxicity and other health problems, so it is urgent to develop highly sensitive detection methods of antibiotics. Here, we designed a dual-mode sensor platform based on closed bipolar electrode (cBPE) electroluminescence (ECL) and mobile phone imaging to detect kanamycin in seawater. The prepared CN-NV-550 displayed extremely intense ECL signal, allowing for convenient mobile phone imaging. The cBPE was combined with DNA cycle amplification technology to prevent the mutual interference between target and the luminescent material, and realized the amplification of signal. In the presence of target Kana, Co3O4 was introduced to the cBPE anode by DNA cycle amplification product, and accelerated the oxidation rate of uric acid (UA). Thus, the electroluminescence response of CN-NV-550 on cBPE cathode was much improved due to the charge balance of the cBPE, achieving both ECL detection and mobile phone imaging assay of Kana, which much improved the accuracy and efficiency of assay. The limit of detection (LOD) in this work is 0.23 pM, and LOD for mobile phone imaging is 0.39 pM. This study integrate ECL imaging visualization of CN-NV-550 and high electrocatalytic activity of Co3O4 into cBPE-ECL detection, providing a new perspective for antibiotic analysis, and has great potential for practical applications, especially in Marine environmental pollution monitoring.


Subject(s)
Electrochemical Techniques , Electrodes , Kanamycin , Luminescent Measurements , Kanamycin/analysis , Electrochemical Techniques/methods , Electrochemical Techniques/instrumentation , Anti-Bacterial Agents/analysis , Biosensing Techniques/methods , Cell Phone , Limit of Detection , Seawater/chemistry , Seawater/analysis
6.
Rapid Commun Mass Spectrom ; 38(20): e9888, 2024 Oct 30.
Article in English | MEDLINE | ID: mdl-39180459

ABSTRACT

RATIONALE: Rapid, accurate, and easy-to-perform diagnostic assays are required to address the current need for the diagnosis of resistant pathogens. That is particularly the case for mycobacteria, such as the human pathogen Mycobacterium tuberculosis, which requires up to 2 weeks for the determination of the drug susceptibility profile using the conventional broth microdilution method. To address this challenge, we investigated the incorporation of deuterium, the stable isotope of hydrogen, into lipids as a read out of the drug susceptibility profile. METHODS: Deuterium is incorporated into newly synthesized proteins or lipids in place of hydrogen as bacterial cells grow, increasing the mass of the macromolecules, which can then be observed via matrix-assisted laser desorption ionization time of flight mass spectrometry (MALDI-TOF MS). As proof-of-concept, we used the non-pathogenic Mycobacterium smegmatis mc2155 strain, which is susceptible to the aminoglycoside antibiotic kanamycin, and M. smegmatis mc2155 containing the empty vector pVV16, which is kanamycin-resistant. Bacteria were incubated in a culture medium containing 50% of deuterium oxide (D2O) and either 1 or 2 times the minimal inhibitory concentration (MIC50) of kanamycin. Lipids were then analyzed using the MBT lipid Xtract matrix combined with routine MALDI mass spectrometry in the positive ion mode to evaluate the changes in the lipid profile. RESULTS: Using this approach, we were able to distinguish susceptible from resistant bacteria in less than 5 h, a process that would take 72 h using the conventional broth microdilution method. CONCLUSIONS: We therefore propose a solution for the rapid determination of drug susceptibility profiles using a phenotypic assay combining D2O stable isotope labelling and lipid analysis by routine MALDI mass spectrometry.


Subject(s)
Lipidomics , Microbial Sensitivity Tests , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization , Spectrometry, Mass, Matrix-Assisted Laser Desorption-Ionization/methods , Lipidomics/methods , Mycobacterium smegmatis/drug effects , Mycobacterium smegmatis/chemistry , Deuterium/chemistry , Deuterium/analysis , Lipids/analysis , Lipids/chemistry , Anti-Bacterial Agents/pharmacology , Humans , Kanamycin/pharmacology , Kanamycin/analysis , Kanamycin/chemistry
7.
Mikrochim Acta ; 191(9): 569, 2024 08 30.
Article in English | MEDLINE | ID: mdl-39212834

ABSTRACT

An electrochemical aptasensor was developed by utilizing a DNA walker driven by catalytic hairpin assembly (CHA) with kanamycin as the model analyte. Kanamycin bound to the aptamer, causes the release of DNA walker, triggers the CHA reaction, leads to the cyclic movement of the walker's long arm, and results in cascade amplification of the signal. The guanine-rich sequences of the double-stranded products produced by CHA were folded to form G-quadruplex structures, with electrochemical active molecules Hemin embedded, forms G-quadruplex/Hemin complexes in situ on the electrode surface, thereby achieving sensitive, efficient, and label-free detection of kanamycin with a limit of detection (LOD) of 0.27 pM (S/N = 3). Meaningfully, the aptasensor demonstrated high sensitivity and reliability in the detection of kanamycin in milk and livestock wastewater samples, suggesting that it has great potential for application in detecting antibiotics in food products and water samples from the environment.


Subject(s)
Anti-Bacterial Agents , Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , G-Quadruplexes , Hemin , Kanamycin , Limit of Detection , Milk , Aptamers, Nucleotide/chemistry , Kanamycin/analysis , Anti-Bacterial Agents/analysis , Electrochemical Techniques/methods , Biosensing Techniques/methods , Milk/chemistry , Hemin/chemistry , Animals , Wastewater/analysis , DNA/chemistry , Catalysis , Electrodes
8.
Anal Methods ; 16(28): 4691-4699, 2024 Jul 18.
Article in English | MEDLINE | ID: mdl-38973362

ABSTRACT

Herein, a new dual-model photoelectrochemical (PEC)/electrochemical (EC) sensor based on Z-scheme titanium dioxide (TiO2) disk/methylene blue (MB) sensibilization for the detection of kanamycin (Kana) was developed. Metal-organic framework-derived porous TiO2 disks were synthesized and exhibited excellent anodic photocurrent under visible light excitation. Subsequently, amino-labeled double-stranded DNA (dsDNA) was introduced into the modified electrode. Photocurrent was enhanced with MB embedded in dsDNA to form Z-scheme TiO2/MB sensibilization. When the target, Kana, was present, it specifically bound to the aptamer in the dsDNA, leading to the disruption of the dsDNA structure and the release of MB. This release of MB and the increase in target spatial resistance resulted in a significant weakening of PEC signal and a decreased oxidation peak current of MB. The PEC sensor successfully detected Kana in the range of 2-1000 pM with an LOD of 0.17 pM. Meanwhile, the EC sensor for Kana detection showed a linear range of 5-500 pM with an LOD of 1.8 pM. Additionally, the sensor exhibited excellent selectivity, reproducibility, stability, and good recoveries when applied to milk and honey samples. As a result, this method has the potential for application in ensuring food safety through the rapid determination of antibiotics in food.


Subject(s)
Electrochemical Techniques , Kanamycin , Methylene Blue , Milk , Titanium , Titanium/chemistry , Kanamycin/analysis , Kanamycin/chemistry , Methylene Blue/chemistry , Electrochemical Techniques/methods , Electrochemical Techniques/instrumentation , Milk/chemistry , Animals , Limit of Detection , Biosensing Techniques/methods , Honey/analysis , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Photochemical Processes , Reproducibility of Results , Electrodes
9.
Anal Chim Acta ; 1316: 342867, 2024 Aug 08.
Article in English | MEDLINE | ID: mdl-38969430

ABSTRACT

BACKGROUND: Kanamycin (KAN) residues in animal-derived foods continuously enter the human body, which will pose serious threats to human health such as hearing loss, nephrotoxicity and other complications. Therefore, to sensitively detect KAN residues by a reliable technology is extremely urgent in food quality and safety. Compared with traditional methods being limited by cost and complexity, photoelectrochemical (PEC) biosensors benefit from some merits such as rapid response, excellent sensitivity and good stability. In this study, the construction of a highly efficient PEC platform to realize KAN residues detection is discussed. RESULTS: Herein, a novel p-n heterojunction consisting of flower-like BiOI microspheres and graphite carbon nitride (g-C3N4) nanoflakes was developed to establish a PEC aptasensor for KAN detection at 0 V. The prepared g-C3N4/BiOI heterostructure showed not only significantly enhanced PEC activity due to the larger specific surface area but also greatly increased charge separation efficiency owing to the strong internal electric field. Meanwhile, using g-C3N4/BiOI as a highly efficient photoactive material for binding amine-functionalized aptamers to capture KAN, the photocurrent signals showed a 'turn off' mode to achieve the sensitive detection of KAN. The proposed PEC aptasensor exhibited linear response for KAN from 5 × 10-9 to 3 × 10-7 mol L-1 with a low detection limit of 1.31 × 10-9 mol L-1, and satisfactory recoveries (97.44-107.38 %) were obtained in real food samples analysis. SIGNIFICANCE: This work presented a novel p-n heterojunction-based PEC aptasensor with strong selectivity and stability, rendering it allowed to detect KAN in animal-derived foods including milk, honey and pork. Additionally, the detection range satisfied the MRLs for KAN specified by the national standards, demonstrating the potential application for food analysis. The study provides a new insight into the development of efficient and practical biosensors for antibiotic residues detection.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , Graphite , Kanamycin , Aptamers, Nucleotide/chemistry , Electrochemical Techniques/methods , Graphite/chemistry , Biosensing Techniques/methods , Kanamycin/analysis , Photochemical Processes , Limit of Detection , Food Contamination/analysis , Nitrogen Compounds/chemistry , Animals , Nitriles/chemistry , Anti-Bacterial Agents/analysis , Bismuth
10.
Mikrochim Acta ; 191(8): 485, 2024 07 26.
Article in English | MEDLINE | ID: mdl-39060720

ABSTRACT

Rare earth (RE)-doped CaS phosphors have been widely used as light-emitting components in various fields. Nevertheless, the application of nanosized CaS particles is still significantly limited by their poor water resistance and weak luminescence. Herein, a lattice-matching strategy is developed by growing an inert shell of cubic NaYF4 phase on the CaS luminescent core. Due to their similarity in crystal structure, a uniform core-shell heterostructure (CaS:Ce3+@NaYF4) can be obtained, which effectively protects the CaS:Ce3+ core from degradation in aqueous environment and enhances its luminescence intensity. As a proof of concept, a label-free aptasensor is further constructed by combining core-shell CaS:Ce3+@NaYF4 and Au nanoparticles (AuNPs) for the ultrasensitive detection of kanamycin antibiotics. Based on the efficient FRET process, the detection linear range of kanamycin spans from 100 to 1000 nM with a detection limit of 7.8 nM. Besides, the aptasensor shows excellent selectivity towards kanamycin antibiotics, and has been successfully applied to the detection of kanamycin spiked in tap water and milk samples, demonstrating its high potential for sensing applications.


Subject(s)
Anti-Bacterial Agents , Fluorides , Gold , Kanamycin , Limit of Detection , Metal Nanoparticles , Milk , Yttrium , Fluorides/chemistry , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Milk/chemistry , Yttrium/chemistry , Gold/chemistry , Metal Nanoparticles/chemistry , Kanamycin/analysis , Kanamycin/chemistry , Aptamers, Nucleotide/chemistry , Animals , Water Pollutants, Chemical/analysis , Luminescence , Drinking Water/analysis , Biosensing Techniques/methods , Water/chemistry , Fluorescence Resonance Energy Transfer/methods
11.
Anal Methods ; 16(24): 3867-3877, 2024 Jun 20.
Article in English | MEDLINE | ID: mdl-38828675

ABSTRACT

A Ti3C2Tx/MoS2/MWCNT@rGONR nanocomposite was prepared for the first time for building a sensitive electrochemical aptasening platform to simultaneously detect kanamycin (Kana) and chloramphenicol (Cap). Owing to their accordion-like structure, rich surface groups, and high charge mobility, Ti3C2Tx/MoS2/MWCNT@rGONR composites provided a spacious covalent immobilization surface and a better electrochemical aptasensing platform. The aptamers of Kana and Cap used in sensors enhance the selectivity. Furthermore, TiP, an ion exchanger, was used for loading more different metal ions functioning as labels to form a sandwich-type sensor together with Ti3C2Tx/MoS2/MWCNT@rGONR, improving the electrochemical sensitivity and obtaining a highly distinguishable signal readout. Under the optimized conditions, the sensor has good detection limits of 0.135 nmol L-1 and 0.173 nmol L-1 for Kana and Cap, respectively, at the same linearity concentration of 0.5-2500 nmol L-1. Finally, it was successfully applied for detection in milk and fish meat, and the results were compared with the standard method HPLC, indicating its great potential for food safety monitoring.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Chloramphenicol , Electrochemical Techniques , Food Contamination , Kanamycin , Milk , Titanium , Chloramphenicol/analysis , Chloramphenicol/chemistry , Kanamycin/analysis , Kanamycin/chemistry , Electrochemical Techniques/methods , Aptamers, Nucleotide/chemistry , Titanium/chemistry , Animals , Milk/chemistry , Food Contamination/analysis , Biosensing Techniques/methods , Molybdenum/chemistry , Limit of Detection , Nanotubes, Carbon/chemistry , Graphite/chemistry , Nanocomposites/chemistry , Food Analysis/methods , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Fishes , Disulfides
12.
Mikrochim Acta ; 191(5): 293, 2024 05 01.
Article in English | MEDLINE | ID: mdl-38691169

ABSTRACT

To address the need for facile, rapid detection of pathogens in water supplies, a fluorescent sensing array platform based on antibiotic-stabilized metal nanoclusters was developed for the multiplex detection of pathogens. Using five common antibiotics, eight different nanoclusters (NCs) were synthesized including ampicillin stabilized copper NCs, cefepime stabilized gold and copper NCs, kanamycin stabilized gold and copper NCs, lysozyme stabilized gold NCs, and vancomycin stabilized gold/silver and copper NCs. Based on the different interaction of each NC with the bacteria strains, unique patterns were generated. Various machine learning algorithms were employed for pattern discernment, among which the artificial neural networks proved to have the highest performance, with an accuracy of 100%. The developed prediction model performed well on an independent test dataset and on real samples gathered from drinking water, tap water and the Anzali Lagoon water, with prediction accuracy of 96.88% and 95.14%, respectively. This work demonstrates how generic antibiotics can be implemented for NC synthesis and used as recognition elements for pathogen detection. Furthermore, it displays how merging machine learning techniques can elevate sensitivity of analytical devices.


Subject(s)
Anti-Bacterial Agents , Copper , Gold , Metal Nanoparticles , Silver , Metal Nanoparticles/chemistry , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Gold/chemistry , Copper/chemistry , Silver/chemistry , Drinking Water/microbiology , Drinking Water/analysis , Neural Networks, Computer , Spectrometry, Fluorescence/methods , Machine Learning , Bacteria/isolation & purification , Fluorescent Dyes/chemistry , Vancomycin/chemistry , Water Microbiology , Kanamycin/analysis
13.
Anal Chim Acta ; 1308: 342659, 2024 Jun 15.
Article in English | MEDLINE | ID: mdl-38740459

ABSTRACT

BACKGROUND: Kanamycin is an antibiotic that can easily cause adverse side effects if used improperly. Due to the extremely low concentrations of kanamycin in food, quantitative detection of kanamycin becomes a challenge. As one of the DNA self-assembly strategies, entropy-driven strand displacement reaction (EDSDR) does not require enzymes or hairpins to participate in the reaction, which greatly reduces the instability of detection results. Therefore, it is a very beneficial attempt to construct a highly sensitive and specific fluorescence detection method based on EDSDR that can detect kanamycin easily and quickly while ensuring that the results are effective and stable. RESULTS: We created an enzyme-free fluorescent aptamer sensor with high specificity and sensitivity for detecting kanamycin in milk by taking advantage of EDSDR and the high specific binding between the target and its aptamer. The specific binding can result in the release of the promoter chain, which then sets off the pre-planned EDSDR cycle. Fluorescent label modification on DNA combined with the fluorescence quenching-recovery mechanism gives the sensor impressive fluorescence response capabilities. The research results showed that within the concentration range of 0.1 nM-50 nM, there was a good relationship between the fluorescence intensity of the solution and the concentration of kanamycin. Specificity experiments and actual sample detection experiments confirmed that the biosensor could achieve highly sensitive and specific detection of trace amounts of kanamycin in food, with a detection limit of 0.053 nM (S/N = 3). SIGNIFICANCE: To our knowledge, this is the first strategy to combine EDSDR with fluorescence to detect kanamycin in food. Accurate results can be obtained in as little as 90 min with no enzymes or hairpins involved in the reaction. Furthermore, our enzyme-free biosensing method is straightforward, highly sensitive, and extremely specific. It has many possible applications, including monitoring antibiotic residues and food safety.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Entropy , Fluorescent Dyes , Kanamycin , Milk , Kanamycin/analysis , Kanamycin/chemistry , Aptamers, Nucleotide/chemistry , Milk/chemistry , Fluorescent Dyes/chemistry , Biosensing Techniques/methods , Spectrometry, Fluorescence , Limit of Detection , Animals , Anti-Bacterial Agents/analysis , Anti-Bacterial Agents/chemistry , Food Contamination/analysis
14.
Biosens Bioelectron ; 259: 116396, 2024 Sep 01.
Article in English | MEDLINE | ID: mdl-38772247

ABSTRACT

Electrochemical biosensors hold promise for advanced analytical applications in modern life analysis due to their miniaturization and cost-effectiveness. Nevertheless, their implementation in complex biological systems necessitates overcoming challenges related to timeliness, sensitivity, and interference resistance. Here, we developed a novel DNA hydrogel three-dimensional electron transporter through liquid-colloid-solid assembly, integrating electronic mediators and employing porous electrode covers with 3D printing technology. Our approach facilitated the fabrication of a high-performance electrochemical sensor for small molecule detection, leveraging target-specific aptamers and catalytic hairpin assembly (CHA) elements within the DNA hydrogel, which exhibited outstanding selectivity, sensitivity, and universality, achieving detection limits of 0.047 nM for kanamycin and 2.67 pM for ATP. Furthermore, this sensor could detect kanamycin in real samples, demonstrating good accuracy and robust anti-interference capabilities in human serum. Our work not only possesses substantial application value in clinical sample analysis but also represents a breakthrough in traditional strategies, thereby contributing to advancements in the application of electrochemical biosensors for life analysis.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , Electrochemical Techniques , Kanamycin , Limit of Detection , Biosensing Techniques/methods , Electrochemical Techniques/methods , Humans , Aptamers, Nucleotide/chemistry , Kanamycin/analysis , Hydrogels/chemistry , DNA/chemistry , Adenosine Triphosphate/analysis , Adenosine Triphosphate/blood , Colloids/chemistry , Printing, Three-Dimensional , Electrodes
15.
Spectrochim Acta A Mol Biomol Spectrosc ; 317: 124399, 2024 Sep 05.
Article in English | MEDLINE | ID: mdl-38718747

ABSTRACT

Herein, a novel sandwich electrochemiluminescence (ECL) aptasensor was developed based on the resonance energy transfer (RET) with iridium complex doped silicate nanoparticles (SiO2@Ir) as energy donor and gold nanoparticles modified TiVC MXene (AuNPs@TiVC) as energy acceptor. Strong anodic ECL signal of SiO2@Ir was obtained through both co-reactant pathway and annihilation pathway. Electrochemical results showed that SiO2@Ir has good electron transfer rate and large specific surface area to immobilize more aptamers. AuNPs@TiVC apparently quenched the ECL signal of SiO2@Ir due to the ECL resonance energy transfer between them. In the presence of kanamycin (KAN), a sandwich type sensor was formed with the aptamer probes as connecters between the donor and the acceptor, resulting in the decrease of ECL intensity. Under the optimal condition, KAN could be sensitively detected in the range of 0.1 pg/mL to 10 ng/mL with a low detection limit of 24.5 fg/mL. The proposed ECL system exhibited satisfactory analytical performance, which can realize the detection of various biological molecules by adopting suitable aptamer.


Subject(s)
Electrochemical Techniques , Gold , Iridium , Kanamycin , Limit of Detection , Metal Nanoparticles , Silicon Dioxide , Silicon Dioxide/chemistry , Gold/chemistry , Metal Nanoparticles/chemistry , Iridium/chemistry , Electrochemical Techniques/methods , Kanamycin/analysis , Luminescent Measurements/methods , Nanospheres/chemistry , Aptamers, Nucleotide/chemistry , Titanium/chemistry , Biosensing Techniques/methods , Energy Transfer
16.
Talanta ; 276: 126200, 2024 Aug 15.
Article in English | MEDLINE | ID: mdl-38735243

ABSTRACT

Herein, a dual-emission Eu metal-organic framework (Eu-MOF) is prepared and used as the ratiometric fluorescence probe for ultrasensitive detection of aminoglycoside antibiotics (AGs). Due to the strong hydrogen bond interactions between AGs and Eu-MOF, the blue emission is enhanced while the red emission has little fluctuation in Eu-MOF with the addition of AGs, thus a good linear relationship with the logarithm of AGs concentrations from 0.001 to 100 µg/mL can be established for quantitative analysis. Good sensitivity with the detection limit of 0.33 ng/mL for apramycin, 0.32 ng/mL for amikacin and 0.30 ng/mL for kanamycin is achieved. The proposed assay demonstrates good selectivity and applicability for determination of AGs in real milk and honey samples. The Eu-MOF materials are further fabricated as fluorescent test papers for facile visual detection. The as-established ratio fluorescence platform offers a portable and economical way for rapid monitoring AGs residues in complex food samples.


Subject(s)
Aminoglycosides , Fluorescent Dyes , Food Contamination , Honey , Metal-Organic Frameworks , Milk , Spectrometry, Fluorescence , Metal-Organic Frameworks/chemistry , Milk/chemistry , Honey/analysis , Fluorescent Dyes/chemistry , Aminoglycosides/analysis , Aminoglycosides/chemistry , Food Contamination/analysis , Spectrometry, Fluorescence/methods , Europium/chemistry , Animals , Anti-Bacterial Agents/analysis , Ligands , Limit of Detection , Food Analysis/methods , Kanamycin/analysis
17.
Anal Chim Acta ; 1304: 342524, 2024 May 22.
Article in English | MEDLINE | ID: mdl-38637033

ABSTRACT

The inappropriate use of antibiotics undoubtedly poses a potential threat to public health, creating an increasing need to develop highly sensitive tests. In this study, we designed a new type of porphyrin metal-organic frameworks (Fe TCPP(Zn) MOFs) with homogeneous catalytic sites. The ferric-based metal ligands of Fe TCPP(Zn) MOFs acted as co-reaction accelerators, which effectively improved the conversion efficiency of H2O2 on the surface of MOFs, then increased the concentration of •OH surrounding porphyrin molecules to achieve self-enhanced electrochemiluminescence (ECL). Based on this, an aptasensor for the specific detection of kanamycin (KAN) in food and environmental water samples was constructed in combination with resonance energy transform (RET), in which Fe TCPP(Zn) MOFs were used as luminescence donor and AuNPs were used as acceptor. Under the best conditions, there was a good linear relationship between the ECL intensity and the logarithm of KAN concentration with a detection limit of 0.28 fM in the range of 1.0 × 10-7-1.0 × 10-13 M, demonstrating satisfactory selectivity and stability. At the same time, the complexity of the detection environment was reduced, which further realized the reliable analysis of KAN in milk, honey and pond water. Overall, this innovative self-enhanced ECL strategy provides a novel approach for constructing efficient ECL systems in MOFs, and also extends the application of MOFs to the analysis and detection of trace antibiotics in food and the environment.


Subject(s)
Biosensing Techniques , Metal Nanoparticles , Metalloporphyrins , Kanamycin/analysis , Gold , Catalytic Domain , Hydrogen Peroxide , Luminescent Measurements , Anti-Bacterial Agents/analysis , Electrochemical Techniques , Water , Limit of Detection
18.
Sci Total Environ ; 928: 172499, 2024 Jun 10.
Article in English | MEDLINE | ID: mdl-38631645

ABSTRACT

In this work, a novel 3D-DNA walker signal amplification strategy was designed to construct a fluorescent aptasensor for the detection of kanamycin (KAN). The aptasensor utilizes split aptamers for the synergistic recognition of KAN. The presence of KAN induces the split aptamers recombination to form the Mg2+-DNAzyme structure, which is activated by Mg2+ to drive the 3D-DNA walker process for cascading signal amplification. Employing gold nanoflowers (AuNFs) as walking substrate material increases the local DNA concentration to enhance the walker efficiency. The prepared fluorescent aptasensor achieved efficient and sensitive detection of KAN with satisfactory results in the concentration range of 1 × 10-8 - 1 × 10-3 µg/kg and the detection limit of 5.63 fg/kg. Meanwhile, the designed fluorescent aptasensor exhibited favorable specificity, anti-interference, storage stability and reproducibility, and verified the feasibility of its application in milk samples. The present work provides an effective tool for the regulation of KAN contamination in animal-derived foods with promising prospects.


Subject(s)
Aptamers, Nucleotide , Biosensing Techniques , DNA, Catalytic , Kanamycin , Kanamycin/analysis , Aptamers, Nucleotide/chemistry , DNA, Catalytic/chemistry , Biosensing Techniques/methods , Gold/chemistry , Limit of Detection , Fluorescence , Magnesium/chemistry , Milk/chemistry
19.
ACS Sens ; 9(4): 1749-1755, 2024 04 26.
Article in English | MEDLINE | ID: mdl-38587118

ABSTRACT

Aggregation-induced emission (AIE) has offered a promising approach for developing low-background fluorescent methods; however, its applications often suffer from complex probe synthesis and poor biocompatibility. Herein, a novel AIE biosensing method for kanamycin antibiotic assays was developed by utilizing a DNA network nanostructure assembled from an aptamer recognition reaction to capture a large number of tetraphenylethylene fluorogen-labeled signal DNA (DTPE) probes. Due to the excellent hydrophilicity of the oligonucleotides, DTPE exhibited excellent water solubility without obvious background signal emission. Based on an ingenious nucleotide design, an abundance of G-quadruplex blocks neighboring the captured DTPE were formed on the DNA nanostructure. Because of the greatly restricted free motion of DTPE by this unique nanostructure, a strong AIE fluorescence signal response was produced to construct the signal transduction strategy. Together with target recycling and rolling circle amplification-based cascade nucleic acid amplification, this method exhibited a wide linear range from 75 fg mL-1 to 1 ng mL-1 and a detection limit down to 24 fg mL-1. The excellent analytical performance and effective manipulation improvement of the method over previous approaches determine its promising potential for various applications.


Subject(s)
Biosensing Techniques , DNA , G-Quadruplexes , Limit of Detection , Nanostructures , Biosensing Techniques/methods , Nanostructures/chemistry , DNA/chemistry , Fluorescent Dyes/chemistry , Aptamers, Nucleotide/chemistry , Spectrometry, Fluorescence , Kanamycin/analysis , Nucleic Acid Amplification Techniques/methods , Stilbenes/chemistry
20.
J Agric Food Chem ; 72(12): 6754-6761, 2024 Mar 27.
Article in English | MEDLINE | ID: mdl-38470333

ABSTRACT

Inappropriate use of veterinary drugs can result in the presence of antibiotic residues in animal-derived foods, which is a threat to human health. A simple yet efficient antibiotic-sensing method is highly desirable. Programmable DNA amplification circuits have supplemented robust toolkits for food contaminants monitoring. However, they currently face limitations in terms of their intricate design and low signal gain. Herein, we have engineered a robust reciprocal catalytic DNA (RCD) circuit for highly efficient bioanalysis. The trigger initiates the cascade hybridization reaction (CHR) to yield plenty of repeated initiators for activating the rolling circle amplification (RCA) circuit. Then the RCA-generated numerous reconstituted triggers can reversely stimulate the CHR circuit. This results in a self-sufficient supply of numerous initiators and triggers for the successive cross-invasion of CHR and RCA amplifiers, thus leading to exponential signal amplification for the highly efficient detection of analytes. With its flexible programmability and modular features, the RCD amplifier can serve as a universal toolbox for the high-performance and accurate sensing of kanamycin in buffer and food samples including milk, honey, and fish, highlighting its enormous promise for low-abundance contaminant analysis in foodstuffs.


Subject(s)
Biosensing Techniques , DNA, Catalytic , Animals , Humans , Kanamycin/analysis , Anti-Bacterial Agents/analysis , Nucleic Acid Hybridization/methods , Fishes/metabolism , Biosensing Techniques/methods , Nucleic Acid Amplification Techniques/methods , Limit of Detection
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