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1.
Genes (Basel) ; 15(8)2024 Jul 27.
Article in English | MEDLINE | ID: mdl-39202352

ABSTRACT

Atypical porcine pestivirus (APPV) can cause congenital tremor type A-II in neonatal piglets, posing a significant threat to swine herd health globally. Our previous study demonstrated that the Mut domains, comprising 112 amino acids at the N-terminus, are the primary functional regions of the E2 protein of APPV. This study identified 14 host cellular proteins that exhibit potential interactions with the Mut domains of the E2 protein using yeast two-hybrid screening. Using bioinformatics analysis, we discovered that the Mut domains of the E2 protein might exert regulatory effects on apoptosis by modulating energy metabolism within the mitochondria. We also conducted co-immunoprecipitation, glutathione S-transferase pull-down, and immunofluorescence assays to confirm the interaction between the Mut domains of the E2 protein and cathepsin H and signal sequence receptor subunit 4 (SSR4). Ultimately, SSR4 enhanced APPV replication in vitro. In summary, our study successfully elucidated the interactions between the Mut domains of the E2 protein and host cell protein, predicted the potential pathways implicated in these interactions, and demonstrated SSR4 involvement in APPV infection. These significant findings contribute valuable knowledge toward a deeper understanding of APPV pathogenesis and the role of the Mut domains of the E2 protein in this intricate process.


Subject(s)
Pestivirus Infections , Pestivirus , Animals , Pestivirus/genetics , Pestivirus/metabolism , Swine , Pestivirus Infections/veterinary , Pestivirus Infections/virology , Pestivirus Infections/genetics , Swine Diseases/virology , Swine Diseases/genetics , Swine Diseases/metabolism , Host-Pathogen Interactions/genetics , Protein Domains , Virus Replication/genetics , Viral Envelope Proteins/genetics , Viral Envelope Proteins/metabolism , Humans , Protein Interaction Maps/genetics
2.
Virol J ; 21(1): 205, 2024 Aug 30.
Article in English | MEDLINE | ID: mdl-39215313

ABSTRACT

Lateral-shaking inducing neuro-degenerative agent virus (LindaV) is a novel member of the highly diverse genus Pestivirus within the family Flaviviridae. LindaV was first detected in Austria in 2015 and was associated with congenital tremor in piglets. Since then, the virus or specific antibodies have been found in a few further pig farms in Austria. However, the actual spatial distribution and the existence of reservoir hosts is largely unknown. Since other pestiviruses of pigs such as classical swine fever virus or atypical porcine pestivirus can also infect wild boar, the question arises whether LindaV is likewise present in the wild boar population. Therefore, we investigated the presence of neutralizing antibodies against LindaV in 200 wild boar samples collected in Southern Germany, which borders Austria. To establish a serological test system, we made use of the interchangeability of the surface glycoproteins and created a chimeric pestivirus using Bungowannah virus (species Pestivirus australiaense) as synthetic backbone. The E1 and E2 glycoproteins were replaced by the heterologous E1 and E2 of LindaV resulting in the chimera BV_E1E2_LV. Viable virus could be rescued and was subsequently applied in a neutralization test. A specific positive control serum generated against the E2 protein of LindaV gave a strong positive result, thereby confirming the functionality of the test system. All wild boar samples, however, tested negative. Hence, there is no evidence that LindaV has become highly prevalent in the wild boar population in Southern Germany.


Subject(s)
Antibodies, Neutralizing , Antibodies, Viral , Pestivirus Infections , Pestivirus , Sus scrofa , Swine Diseases , Animals , Germany/epidemiology , Pestivirus Infections/veterinary , Pestivirus Infections/epidemiology , Pestivirus Infections/virology , Sus scrofa/virology , Antibodies, Viral/blood , Swine , Pestivirus/genetics , Pestivirus/isolation & purification , Swine Diseases/virology , Swine Diseases/epidemiology , Antibodies, Neutralizing/blood , Neutralization Tests
3.
Virus Res ; 348: 199443, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39094475

ABSTRACT

Atypical porcine pestivirus (APPV) is a novel member of the Pestivirus genus detected in association with congenital tremor (CT) type A-II outbreaks and from apparently healthy pigs, both as singular infection and as part of multi-pathogen infections. 'Classical' pestiviruses are known to cause immunosuppression of their host, which can increase susceptibility to secondary infections, severely impacting health, welfare, and production. To investigate APPV's effect on the host's immune system and characterise disease outcomes, 12 piglets from a natural APPV CT type A-II outbreak were experimentally infected with porcine reproductive and respiratory syndrome virus (PRRSV), a significant porcine pathogen. Rectal temperatures indicating febrile responses, viremia and viral-specific humoral and cellular responses were assessed throughout the study. Pathological assessment of the lungs and APPV-PRRSV co-localisation within the lungs was performed at necropsy. Viral co-localisation and pathological assessment of the lungs (Immunohistochemistry, BaseScope in situ hybridisation) were performed post-mortem. APPV status did not impact virological or immunological differences in PRRSV-infected groups. However, significantly higher rectal temperatures were observed in the APPV+ve/PRRSV+ve group over four days, indicating APPV increased the febrile response. Significant differences in the lung consolidation of the apical and intermediate lobes were also present, suggesting that APPV co-infection may augment lung pathology.


Subject(s)
Coinfection , Lung , Pestivirus Infections , Pestivirus , Porcine Reproductive and Respiratory Syndrome , Porcine respiratory and reproductive syndrome virus , Animals , Swine , Pestivirus Infections/veterinary , Pestivirus Infections/virology , Pestivirus Infections/pathology , Pestivirus/pathogenicity , Pestivirus/genetics , Coinfection/virology , Coinfection/veterinary , Porcine Reproductive and Respiratory Syndrome/virology , Porcine Reproductive and Respiratory Syndrome/pathology , Porcine Reproductive and Respiratory Syndrome/immunology , Porcine respiratory and reproductive syndrome virus/pathogenicity , Lung/virology , Lung/pathology , Viremia , Swine Diseases/virology , Swine Diseases/pathology , Swine Diseases/immunology , Antibodies, Viral/blood
4.
Viruses ; 16(8)2024 Aug 15.
Article in English | MEDLINE | ID: mdl-39205275

ABSTRACT

Since the start of the mandatory nationwide bovine viral diarrhea (BVD) eradication program in Germany in 2011, the number of persistently infected (PI) animals has decreased considerably, resulting in a continuous decrease in seroprevalence. The increasingly BVD-naive cattle population could facilitate spillover infections with non-BVDV ruminant pestiviruses. Here, we report two cases in which novel pestiviruses were isolated from cattle; in both cases, the whole genome sequence showed the highest level of identity to strain "Pestivirus reindeer-1". Both novel viruses gave positive results in BVDV diagnostic test systems, confirming that cross-reactivity is an important issue in pestivirus diagnostics. In the first case, the pestivirus was probably transmitted from sheep kept with the affected cattle, suggesting that the co-housing of small ruminants and cattle is a risk factor. The source of infection could not be determined in the second case. The occurrence of these two cases in independent cattle holdings within a relatively short time frame suggests that it would be useful to determine the presence of pestiviruses in small ruminants or even wild ruminants to better assess risk factors, especially for BVDV-free populations.


Subject(s)
Bovine Virus Diarrhea-Mucosal Disease , Diarrhea Viruses, Bovine Viral , Pestivirus , Animals , Cattle , Bovine Virus Diarrhea-Mucosal Disease/diagnosis , Bovine Virus Diarrhea-Mucosal Disease/virology , Diarrhea Viruses, Bovine Viral/genetics , Diarrhea Viruses, Bovine Viral/isolation & purification , Pestivirus/genetics , Pestivirus/isolation & purification , Pestivirus/classification , Germany/epidemiology , Phylogeny , Seroepidemiologic Studies , Antibodies, Viral/blood , Pestivirus Infections/veterinary , Pestivirus Infections/virology , Pestivirus Infections/diagnosis , Genome, Viral , Sheep , Cross Reactions
5.
Vet Microbiol ; 296: 110155, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38996750

ABSTRACT

Bovine Pestivirus typically involves one or more organ systems, with clinical manifestations ranging from mild to severe fatal systemic illness that lead to significant reproductive, productive, and economic losses. Vaccines face the challenge of addressing the significant variability of pestiviruses, which affects the interaction between viral antigens and the immune system's ability to provide protection. This study aimed to evaluate the serological responses against bovine viral diarrhea virus 1 (Pestivirus A) and Pestivirus B induced by 10 commercial vaccines, including one recombinant (vaccine E), two modified live (MLV multivalent, vaccine I, and MLV monovalent, vaccine J), and seven killed vaccines (KLV, vaccines A to H). Additionally, we evaluated the cross-reactivity between Pestivirus A and B from vaccines and HoBi-like pestivirus (Pestivirus H). In Phase 1, guinea pigs were used to screen for non-MLVs. They were divided into nine groups (n=6 each) and received two doses (⅕ of bovine dose) of eight different non-MLV on Days 0 and 21. Serum samples were collected on Days 0 and 30 for serological analyse. In Phase 2, Holstein × Gir heifers (n= 45) were divided into five groups, comprising 6-9 animals. They were vaccinated either once with MLVs or twice with the top non-MLVs screened in Phase 1. Serum samples were harvested on d0 (vaccination day) and d60 (60 days after the first dose) for MLV and non-MLV. Specific antibody titers were assessed virus neutralization (VN) and transformed in log2 for statistical analysis using PROC-MIXED. Significant effects were observed for vaccine groups, time points, and their interactions concerning neutralizing antibodies against Pestivirus A and B in both Guinea pigs and heifers. The Phase 1 study revealed serological responses against Pestivirus A exclusively in non-MLV D (85.33±13.49) and E (72.00±19.26). In the bovine study, the KLD vaccine D (72.00±15.10), recombinant vaccine E (90.66±25.85), and MLV I (170.66±28.22) resulted in an average of neutralizing antibodies against Pestivirus A that exceeded the protective threshold (≥ 60). However,individual analysis of heifers showed a higher frequency of animals presenting titers of Pestivirus A Ab surpassing 32 following vaccination with MLV I and J. None of the vaccine formulations in either study elicited a protective immune response against Pestivirus B or demonstrated cross-reactivity against Pestivirus H.


Subject(s)
Antibodies, Viral , Diarrhea Virus 1, Bovine Viral , Viral Vaccines , Animals , Cattle , Viral Vaccines/immunology , Viral Vaccines/administration & dosage , Antibodies, Viral/blood , Guinea Pigs , Female , Diarrhea Virus 1, Bovine Viral/immunology , Bovine Virus Diarrhea-Mucosal Disease/prevention & control , Bovine Virus Diarrhea-Mucosal Disease/immunology , Bovine Virus Diarrhea-Mucosal Disease/virology , Antibodies, Neutralizing/blood , Cross Reactions , Vaccination/veterinary , Diarrhea Viruses, Bovine Viral/immunology , Vaccines, Inactivated/immunology , Vaccines, Inactivated/administration & dosage , Pestivirus/immunology , Pestivirus Infections/veterinary , Pestivirus Infections/prevention & control , Pestivirus Infections/immunology , Pestivirus Infections/virology , Vaccines, Synthetic/immunology , Vaccines, Synthetic/administration & dosage
6.
Viruses ; 16(6)2024 May 21.
Article in English | MEDLINE | ID: mdl-38932108

ABSTRACT

Over the last few decades, several pestiviruses have been discovered in ruminants, pigs, and, more recently, in non-ungulate hosts. Consequently, the nomenclature and taxonomy of pestiviruses have been updated. The Tunisian sheep-like pestivirus (TSV, Pestivirus N) is an additional ovine pestivirus genetically closely related to classical swine fever virus (CSFV). In this study, during a survey of pestivirus infections in ovine farms in the Lombardy region of Northern Italy, we identified and isolated a pestivirus strain from a sheep that was found to belong to Pestivirus N species based on its genomic nucleotide identity. The sheep itself and its lamb were found to be persistently infected. We performed molecular characterization and phylogenetic analysis of three viral genomic regions (a fragment of 5'-UTR, partial Npro, and the whole E2 region). In conclusion, these results confirmed circulating TSV in Northern Italy after notification in Sicily, Italy, and France. Correlation with Italian, Tunisian, and French strains showed that detection might have resulted from the trading of live animals between countries, which supports the need for health control measures.


Subject(s)
Genome, Viral , Pestivirus Infections , Pestivirus , Phylogeny , Sheep Diseases , Animals , Sheep/virology , Italy/epidemiology , Pestivirus/genetics , Pestivirus/classification , Pestivirus/isolation & purification , Sheep Diseases/virology , Sheep Diseases/epidemiology , Pestivirus Infections/veterinary , Pestivirus Infections/virology , Tunisia/epidemiology
7.
Viruses ; 14(2)2022 02 05.
Article in English | MEDLINE | ID: mdl-35215920

ABSTRACT

Linda virus (LindaV) was first identified in a pig farm in Styria, Austria in 2015 and associated with congenital tremor (CT) type A-II in newborn piglets. Since then, only one more LindaV affected farm was retrospectively discovered 10 km away from the initially affected farm. Here, we report the recent outbreak of a novel LindaV strain in a farrow-to-finish farm in the federal state Carinthia, Austria. No connection between this farm and the previously affected farms could be discovered. The outbreak was characterized by severe CT cases in several litters and high preweaning mortality. A herd visit two months after the onset of clinical symptoms followed by a diagnostic workup revealed the presence of several viremic six-week-old nursery pigs. These animals shed large amounts of virus via feces and saliva, implying an important epidemiological role for within- and between-herd virus transmission. The novel LindaV strain was isolated and genetically characterized. The findings underline a low prevalence of LindaV in the Austrian pig population and highlight the threat when introduced into a pig herd. Furthermore, the results urge the need to better understand the routes of persistence and transmission of this enigmatic pestivirus in the pig population.


Subject(s)
Communicable Diseases, Emerging/veterinary , Pestivirus Infections/veterinary , Pestivirus/isolation & purification , Swine Diseases/virology , Animals , Austria/epidemiology , Communicable Diseases, Emerging/epidemiology , Communicable Diseases, Emerging/virology , Disease Outbreaks , Farms , Feces/virology , Pestivirus/classification , Pestivirus/genetics , Pestivirus/physiology , Pestivirus Infections/epidemiology , Pestivirus Infections/virology , Phylogeny , Retrospective Studies , Swine , Swine Diseases/epidemiology
8.
Viruses ; 13(8)2021 08 04.
Article in English | MEDLINE | ID: mdl-34452404

ABSTRACT

Apart from the established pestivirus species Pestivirus A to Pestivirus K novel species emerged. Pigs represent not only hosts for porcine pestiviruses, but are also susceptible to bovine viral diarrhea virus, border disease virus (BDV) and other ruminant pestiviruses. The present study focused on the characterization of the ovine Tunisian sheep-like virus (TSV) as well as Bungowannah virus (BuPV) and BDV strain Frijters, which were isolated from pigs. For this purpose, we performed genetic characterization based on complete coding sequences, studies on virus replication in cell culture and in domestic pigs, and cross-neutralization assays using experimentally derived sera. TSV forms a distinct phylogenetic group more closely related to Pestivirus C (classical swine fever virus, CSFV) than to Pestivirus D (BDV). In contrast to BDV and BuPV, TSV replicates by far more efficiently on ovine than on porcine cells. Nevertheless, pigs were susceptible to TSV. As a consequence of close antigenic relatedness of TSV to CSFV, cross-reactivity was detected in CSFV-specific antibody assays. In conclusion, TSV is genetically closely related to CSFV and can replicate in domestic pigs. Due to close antigenic relatedness, field infections of pigs with TSV and other ruminant pestiviruses can interfere with serological diagnosis of classical swine fever.


Subject(s)
Border disease virus/genetics , Pestivirus Infections/virology , Pestivirus/classification , Pestivirus/genetics , Virus Replication , Animals , Border disease virus/immunology , Cross Reactions/immunology , Host Specificity , Pestivirus/immunology , Pestivirus Infections/diagnosis , Pestivirus Infections/immunology , Phylogeny , Serologic Tests , Sheep , Swine
9.
Viruses ; 13(8)2021 08 04.
Article in English | MEDLINE | ID: mdl-34452407

ABSTRACT

Pestiviruses are plus-stranded RNA viruses belonging to the family Flaviviridae. They comprise several important pathogens like classical swine fever virus and bovine viral diarrhea virus that induce economically important animal diseases. In 2017, the last update of pestivirus taxonomy resulted in demarcation of 11 species designated Pestivirus A through Pestivirus K. Since then, multiple new pestiviruses have been reported including pathogens associated with disease in pigs or small ruminants. In addition, pestivirus sequences have been found during metagenomics analysis of different non-ungulate hosts (bats, rodents, whale, and pangolin), but the consequences of this pestivirus diversity for animal health still need to be established. To provide a systematic classification of the newly discovered viruses, we analyzed the genetic relationship based on complete coding sequences (cds) and deduced polyprotein sequences and calculated pairwise distances that allow species demarcation. In addition, phylogenetic analysis was performed based on a highly conserved region within the non-structural protein NS5B. Taking into account the genetic relationships observed together with available information about antigenic properties, host origin, and characteristics of disease, we propose to expand the number of pestivirus species to 19 by adding eight additional species designated Pestivirus L through Pestivirus S.


Subject(s)
Flaviviridae/classification , Pestivirus Infections/veterinary , Pestivirus/classification , Phylogeny , Animals , Flaviviridae/genetics , Pestivirus/genetics , Pestivirus Infections/virology , Ruminants/virology , Swine/virology , Viral Proteins/genetics
10.
Arch Virol ; 166(10): 2733-2741, 2021 Oct.
Article in English | MEDLINE | ID: mdl-34322722

ABSTRACT

Congenital tremor (CT) type A-II in piglets is a worldwide disease caused by an emerging atypical porcine pestivirus (APPV). Preparation and evaluation of vaccines in laboratory animals is an important preliminary step toward prevention and control of the disease. Here, virus-like particles (VLPs) of APPV were prepared and VLPs vaccine was evaluated in BALB/c mice. Purified Erns and E2 proteins expressed in E. coli were allowed to self-assemble into VLPs, which had the appearance of hollow spherical particles with a diameter of about 100 nm by transmission electron microscopy (TEM). The VLPs induced strong antibody responses and reduced the viral load in tissues of BALB/c mice. The data from animal challenge experiments, RT-PCR, and immunohistochemical analysis demonstrated that BALB/c mice are an appropriate laboratory model for APPV. These results suggest the feasibility of using VLPs as a vaccine for the prevention and control of APPV and provide useful information for further study of APPV in laboratory animals.


Subject(s)
Pestivirus Infections/prevention & control , Pestivirus/immunology , Vaccination/veterinary , Virus Replication/drug effects , Animals , Antibodies, Viral/blood , Disease Models, Animal , Mice , Mice, Inbred BALB C , Pestivirus Infections/virology , Recombinant Proteins/genetics , Recombinant Proteins/immunology , Swine , Swine Diseases/prevention & control , Swine Diseases/virology , Vaccines, Virus-Like Particle/genetics , Vaccines, Virus-Like Particle/immunology , Viral Envelope Proteins/genetics , Viral Envelope Proteins/immunology , Viral Load , Viral Vaccines/genetics , Viral Vaccines/immunology
11.
Viruses ; 13(7)2021 06 23.
Article in English | MEDLINE | ID: mdl-34201636

ABSTRACT

Pestiviruses express the unique essential envelope protein Erns, which exhibits RNase activity, is attached to membranes by a long amphipathic helix, and is partially secreted from infected cells. The RNase activity of Erns is directly connected with pestivirus virulence. Formation of homodimers and secretion of the protein are hypothesized to be important for its role as a virulence factor, which impairs the host's innate immune response to pestivirus infection. The unusual membrane anchor of Erns raises questions with regard to proteolytic processing of the viral polyprotein at the Erns carboxy-terminus. Moreover, the membrane anchor is crucial for establishing the critical equilibrium between retention and secretion and ensures intracellular accumulation of the protein at the site of virus budding so that it is available to serve both as structural component of the virion and factor controlling host immune reactions. In the present manuscript, we summarize published as well as new data on the molecular features of Erns including aspects of its interplay with the other two envelope proteins with a special focus on the biochemistry of the Erns membrane anchor.


Subject(s)
Cell Membrane/metabolism , Ribonucleases/metabolism , Viral Envelope Proteins/metabolism , Animals , Cell Line , Endoplasmic Reticulum/metabolism , Extracellular Vesicles/metabolism , Helix-Loop-Helix Motifs , Microbial Viability , Mutation , Pestivirus/chemistry , Pestivirus/metabolism , Pestivirus Infections/immunology , Pestivirus Infections/virology , Polyproteins/chemistry , Polyproteins/metabolism , Protein Multimerization , Proteolysis , Ribonucleases/chemistry , Ribonucleases/genetics , Viral Envelope Proteins/chemistry , Viral Envelope Proteins/genetics , Virus Assembly , Virus Release
12.
Braz J Microbiol ; 52(2): 1037-1042, 2021 Jun.
Article in English | MEDLINE | ID: mdl-33638128

ABSTRACT

Bovine viral diarrhea virus (BVDV) is a major pathogen in cattle herds. Considering the epidemiological importance of pestiviruses and the process of wild boar invasion in Brazil, this study aimed to investigate the presence of BVDV in free-living boars. Forty-nine free-living wild boars were collected by exotic wildlife controller agents in 2017 and 2018. The presence of BVDV antibodies was evaluated in 42 serum samples using the virus neutralization test, and the detection of BVDV RNA was performed from the 5'UTR genomic region by RT-PCR assay in 49 lung tissue samples followed by sequencing of amplicons. BVDV neutralizing antibodies in serum were not identified in any of the evaluated samples. However, 3/49 (6.12%) lung samples were positive for BVDV RNA and classified one as BVDV-1a and two as 1d subgenotype. This report identified BVDV RNA in free-living wild boars and these results should be considered in BVDV control programs, especially in extensive beef cattle rearing systems.


Subject(s)
Animals, Wild/virology , Diarrhea Virus 1, Bovine Viral/isolation & purification , Sus scrofa/virology , 5' Untranslated Regions/genetics , Animals , Antibodies, Viral/blood , Brazil , Diarrhea Virus 1, Bovine Viral/classification , Diarrhea Virus 1, Bovine Viral/genetics , Diarrhea Virus 1, Bovine Viral/immunology , Genotype , Lung/virology , Pestivirus Infections/veterinary , Pestivirus Infections/virology , Phylogeny , RNA, Viral/genetics , Swine , Swine Diseases/virology
13.
Vet Med Sci ; 7(3): 714-723, 2021 05.
Article in English | MEDLINE | ID: mdl-33314734

ABSTRACT

Atypical porcine pestivirus (APPV) was identified and associated with congenital tremor (CT) type A-II in new born piglets and has been reported in many countries. In China, the first APPV identification in swine herds was reported in Guangdong province in 2016. To investigate the genetic characteristics of APPV in Guangxi province, 53 tissue samples from neonatal piglets with CT were collected and detected from October 2017 to May 2019. Five APPV strains which were named as GX04/2017, GX01-2018, GX02-2018, GX01-2019 and GX02-2019 were obtained. Sequence analysis revealed that all six APPV strains from Guangxi province, including five strains from this study and one from a previous report, shared 83.3%-97.5% nucleotide identity of complete genome and 91.7%-99.1% amino acid identity of the open reading frame (ORF), and shared 77.7%-97.7% nucleotide identity of complete genome and 90.6%-99.3% amino acid identity of ORF with reference strains. Phylogenetic analysis indicated that all APPV strains could be divided into three clades based on the complete genome, Npro , Erns and E2 gene sequences, respectively; and the APPV strains from Guangxi province distributed in two clades (clades I and II). No sign of recombination was observed from Guangxi strains. Evolution analysis performed on the complete genome of 58 APPV strains showed that America, Europe and Asia strains during 2006-2019 evolved at a mean rate of 1.37 × 10-4 substitutions/site/year, and the most recent common ancestor (tMRCA) of them was estimated as 1,700.5 years ago. The findings of this study indicated that there existed a high degree of genetic diversity of APPV from Guangxi province, Southern China, which provided important information on the epidemiological features and evolutionary relationships of APPV.


Subject(s)
Evolution, Molecular , Genetic Variation , Pestivirus Infections/veterinary , Pestivirus/genetics , Swine Diseases/virology , Animals , China , Pestivirus Infections/virology , Phylogeny , Sus scrofa , Swine , Swine Diseases/congenital , Tremor/congenital , Tremor/veterinary , Tremor/virology
14.
Transbound Emerg Dis ; 68(2): 417-426, 2021 Mar.
Article in English | MEDLINE | ID: mdl-32564510

ABSTRACT

This study was carried out to investigate the frequency and genetic diversity of pestiviruses in abortion cases in cattle and small ruminants in Turkey. During January 2012 and December 2017, a total of 2029 aborted foetuses (553 bovine foetuses, 1,388 sheep foetuses and 88 goat foetuses) were collected from different regions of Turkey. Real-time RT-PCR (RRT-PCR) assays were used to detect pestiviral RNA in aborted foetuses. To confirm the cause of abortion, pestivirus-positive foetuses were also examined for the presence of Brucella spp., Campylobacter spp., Chlamydophila abortus (C. abortus), akabane virus, bluetongue virus and Schmallenberg virus by molecular detection methods. Pestiviral RNA was detected in 61 (11%) of the 553 bovine foetuses, 124 (8.9%) of the 1,388 sheep foetuses and 3 (3.4%) of the 88 goat foetuses. Furthermore, C. abortus DNA was detected in 3 pestivirus-positive sheep foetuses, whereas other infectious agents were not detected in pestivirus-positive foetuses. Genetic characterization of the pestivirus RRT-PCR positive samples was conducted by sequencing 5' untranslated (5' UTR) and non-structural autoprotease (Npro ) genomic regions. A total of 68 sequences were obtained, and phylogenetic analyses revealed that all sequences belonged to BVDV-1, including 1b (8/68), 1f (2/68), 1l (4/68), 1r (10/68), Aydin-like pestivirus (20/68) and one unknown genotype (24/68). The 5' UTR and Npro sequences of this unknown genotype differed from pestiviruses previously described, providing evidence for the presence of an emerging genotype within the species Pestivirus I, tentatively named as 'Konya-like' pestivirus. 'Konya-like' pestivirus was the dominant genotype in sheep foetuses, whereas Aydin-like pestivirus was found to be the predominant genotype in bovine foetuses. To the best my knowledge, this is the first report of Aydin-like pestivirus infection in cattle. The information provided in this study contributes to the understanding the dissemination and evolution of pestiviruses and could be beneficial for developing more effective vaccines.


Subject(s)
Abortion, Veterinary/virology , Fetal Diseases/veterinary , Genome, Viral , Pestivirus Infections/veterinary , Pestivirus/classification , Pestivirus/genetics , 5' Untranslated Regions , Animals , Cattle , Cattle Diseases/virology , Fetal Diseases/virology , Fetus/virology , Genomics , Genotype , Goat Diseases/virology , Goats , Pestivirus/isolation & purification , Pestivirus Infections/virology , Phylogeny , Sheep , Sheep Diseases/virology , Turkey
15.
Transbound Emerg Dis ; 68(3): 1069-1074, 2021 May.
Article in English | MEDLINE | ID: mdl-32926568

ABSTRACT

HoBi-like pestivirus is an emerging atypical pestivirus in cattle and small ruminants, causing clinical signs similar to those observed in bovine viral diarrhoea virus infections. Natural infection of HoBi-like pestivirus has been reported in cattle herds and small ruminants in multiple countries in South America, Europe and Asia. However, HoBi-like pestiviruses were only identified from contaminated bovine serum and small ruminants in China. So far, no clinical cases induced by HoBi-like pestivirus infection were reported in Chinese cattle herds. Here, for the first time, we reported natural infection of HoBi-like pestivirus in a cattle herd in China. Sick cattle with severe respiratory and diarrhoea and high fatality rate were found in a beef cattle herd in Shandong province in November 2017. RT-PCR, viral isolation, sequencing and phylogenetic analysis showed that the primary causative agent was HoBi-like pestivirus. The isolated HoBi-like pestivirus strain, SDJN-China-2019, shared 94.1%-97.5% homology with the LV168-20_16RN strain from Brazil in nucleotide of 5'UTR, Npro and E2 while it shared only 88.5%-92.1% homology with Asian HoBi-like virus strain Th/04-Khonkaen. Multiple unique mutations of amino acid were observed in Npro and E2 proteins of SDJN-China-2019, which were different from that of other reference strains. In summary, this study provides the first evidence of HoBi-like pestivirus infection in Chinese cattle herds, raising potential threat to the cattle industry in China.


Subject(s)
Cattle Diseases/virology , Pestivirus Infections/veterinary , Pestivirus/isolation & purification , Respiratory Tract Infections/veterinary , Animals , Cattle , China , Pestivirus/classification , Pestivirus Infections/virology , Respiratory Tract Infections/virology
16.
Prev Vet Med ; 184: 105156, 2020 Nov.
Article in English | MEDLINE | ID: mdl-33007610

ABSTRACT

Ruminant pestiviruses are widely distributed worldwide, causing congenital disease and massive economic losses. Although ruminant production is an important economic sector in North Africa, the knowledge about pestiviruses is scarce. The present study aimed at assessing the presence of Pestivirus in cattle in Algeria, and to review the data available on ruminant pestiviruses in North Africa. A cross-sectional study was conducted on dairy farms from North-Western Algeria. Blood samples from 234 dairy cattle from 31 herds were collected. All sera were analysed for the presence of antibodies using a commercial iELISA. The presence of Pestivirus RNA was also assessed by using a Reverse Transcription-PCR, and PCR-positive samples were sequenced. Risk factors related to Pestivirus infection were also analysed. The review of the presence of ruminant pestiviruses in North Africa was performed using a systematic search and compilation methodology of the peer-reviewed literature available in order to identify gaps of knowledge for future research. The seroprevalence at population and farm levels obtained in the present study (59.9% and 93.5%, respectively) concur with data reported in neighbouring countries. Risk factors associated with Pestivirus infection in cattle were the presence of sheep in the herd and the animal category (cow vs heifer). Furthermore, we confirmed the presence of BVDV-1a in Algeria. The scarce data suggest an endemic epidemiological scenario of pestivirus in livestock. The lack of studies about the epidemiology and molecular variability of ruminant pestiviruses in livestock and wildlife in North Africa is of concern for animal health and wildlife conservation, and needs to be addressed.


Subject(s)
Cattle Diseases/epidemiology , Pestivirus Infections/veterinary , Pestivirus/isolation & purification , Africa, Northern/epidemiology , Algeria/epidemiology , Animals , Antibodies, Bacterial/analysis , Cattle , Cattle Diseases/virology , Cross-Sectional Studies , Dairying , Enzyme-Linked Immunosorbent Assay/veterinary , Female , Pestivirus Infections/epidemiology , Pestivirus Infections/virology , Prevalence , RNA, Viral/analysis , Reverse Transcriptase Polymerase Chain Reaction/veterinary , Risk Factors , Ruminants , Seroepidemiologic Studies , Sheep, Domestic
17.
Viruses ; 12(10)2020 09 25.
Article in English | MEDLINE | ID: mdl-32992946

ABSTRACT

Atypical porcine pestivirus (APPV) is a single-stranded RNA virus from the family Flaviviridae, which is linked to congenital tremor (CT) type A-II in newborn piglets. Here, we retrospectively investigated the molecular evolution of APPV on an affected herd between 2013 and 2019. Monitoring was done at regular intervals, and the same genotype of APPV was found during the entire study period, suggesting no introductions from outside the farm. The nucleotide substitutions over time did not show substantial amino acid variation in the structural glycoproteins. Furthermore, the evolution of the virus showed mainly purifying selection, and no positive selection. The limited pressure on the virus to change at immune-dominant regions suggested that the immune pressure at the farm might be low. In conclusion, farms can have circulation of APPV for years, and massive testing and removal of infected animals are not sufficient to clear the virus from affected farms.


Subject(s)
Evolution, Molecular , Pestivirus Infections/veterinary , Pestivirus/genetics , Swine Diseases/virology , Animals , Animals, Newborn , Disease Outbreaks/veterinary , Genetic Variation , Genome, Viral/genetics , Pestivirus/isolation & purification , Pestivirus Infections/congenital , Pestivirus Infections/epidemiology , Pestivirus Infections/virology , Phylogeny , Retrospective Studies , Selection, Genetic , Swine , Swine Diseases/congenital , Swine Diseases/epidemiology , Tremor/congenital , Tremor/epidemiology , Tremor/veterinary , Tremor/virology , Viral Proteins/genetics
18.
J Vet Diagn Invest ; 32(5): 695-699, 2020 Sep.
Article in English | MEDLINE | ID: mdl-32667260

ABSTRACT

Atypical porcine pestivirus (APPV) had been detected in many countries. However, to date, a commercial detection kit is not available because of a lack of specific monoclonal antibodies (mAbs) to APPV. We generated 7 mAbs targeting the NS3 protein of APPV. Isotyping results indicated that all of these mAbs are IgG1 with a kappa light chain. We analyzed the epitopes recognized by mAbs 2B6, 6G11, 8D1, 8D3, and 8F12, which recognized the same linear epitope (GRIKSAYSDE); the 6H3 and 7E10 mAbs recognized 2 different conformational epitopes. Applications of these antibodies were verified by ELISA, western blot, indirect immunofluorescence assay, and flow cytometry. The antibodies were functionally workable for these immunoassays except for 8F12, which could not be used in flow cytometry.


Subject(s)
Antibodies, Monoclonal/isolation & purification , Antibodies, Viral/isolation & purification , Pestivirus Infections/veterinary , Pestivirus/immunology , Swine Diseases/immunology , Viral Nonstructural Proteins/isolation & purification , Animals , Pestivirus Infections/immunology , Pestivirus Infections/virology , RNA Helicases/isolation & purification , Serine Endopeptidases/isolation & purification , Sus scrofa , Swine , Swine Diseases/virology
19.
Viruses ; 12(7)2020 07 17.
Article in English | MEDLINE | ID: mdl-32709168

ABSTRACT

This study shows the origin and the pathogenic role of a novel ovine pestivirus (OVPV) isolated in 2017 in Italy, as a pathogenic agent causing severe abortions after infection in pregnant ewes and high capacity for virus trans-placental transmission as well as the birth of lambs suffering OVPV-persistent infection. The OVPV infection induced early antibody response detected by the specific ELISA against classical swine fever virus (CSFV), another important virus affecting swine. The neutralizing antibody response were similar against CSFV strains from genotype 2 and the OVPV. These viruses showed high identity in the B/C domain of the E2-glycoprotein. Close molecular diagnostics cross-reactivity between CSFV and OVPV was found and a new OVPV molecular assay was developed. The phylodynamic analysis showed that CSFV seems to have emerged as the result of an inter-species jump of Tunisian sheep virus (TSV) from sheep to pigs. The OVPV and the CSFV share the TSV as a common ancestor, emerging around 300 years ago. This suggests that the differentiation of TSV into two dangerous new viruses for animal health (CSFV and OVPV) was likely favored by human intervention for the close housing of multiple species for intensive livestock production.


Subject(s)
Classical Swine Fever Virus/immunology , Pestivirus Infections/veterinary , Pestivirus , Sheep Diseases/virology , Abortion, Veterinary/virology , Animals , Antibodies, Neutralizing/immunology , Antibody Formation/immunology , Cross Reactions/immunology , Enzyme-Linked Immunosorbent Assay/veterinary , Female , Italy , Pestivirus/genetics , Pestivirus/immunology , Pestivirus/pathogenicity , Pestivirus Infections/virology , Phylogeny , Pregnancy , RNA, Viral/genetics , Real-Time Polymerase Chain Reaction , Sheep/virology
20.
J Virol ; 94(14)2020 07 01.
Article in English | MEDLINE | ID: mdl-32404522

ABSTRACT

Autonomously replicating subgenomic Bungowannah virus (BuPV) RNAs (BuPV replicons) with deletions of the genome regions encoding the structural proteins C, ERNS, E1, and E2 were constructed on the basis of an infectious cDNA clone of BuPV. Nanoluciferase (Nluc) insertion was used to compare the replication efficiencies of all constructs after electroporation of in vitro-transcribed RNA from the different clones. Deletion of C, E1, E2, or the complete structural protein genome region (C-ERNS-E1-E2) prevented the production of infectious progeny virus, whereas deletion of ERNS still allowed the generation of infectious particles. However, those ΔERNS viral particles were defective in virus assembly and/or egress and could not be further propagated for more than three additional passages in porcine SK-6 cells. These "defective-in-third-cycle" BuPV ΔERNS mutants were subsequently used to express the classical swine fever virus envelope protein E2, the N-terminal domain of the Schmallenberg virus Gc protein, and the receptor binding domain of the Middle East respiratory syndrome coronavirus spike protein. The constructs could be efficiently complemented and further passaged in SK-6 cells constitutively expressing the BuPV ERNS protein. Importantly, BuPVs are able to infect a wide variety of target cell lines, allowing expression in a very wide host spectrum. Therefore, we suggest that packaged BuPV ΔERNS replicon particles have potential as broad-spectrum viral vectors.IMPORTANCE The proteins NPRO and ERNS are unique for the genus Pestivirus, but only NPRO has been demonstrated to be nonessential for in vitro growth. While this was also speculated for ERNS, it has always been previously shown that pestivirus replicons with deletions of the structural proteins ERNS, E1, or E2 did not produce any infectious progeny virus in susceptible host cells. Here, we demonstrated for the first time that BuPV ERNS is dispensable for the generation of infectious virus particles but still important for efficient passaging. The ERNS-defective BuPV particles showed clearly limited growth in cell culture but were capable of several rounds of infection, expression of foreign genes, and highly efficient trans-complementation to rescue virus replicon particles (VRPs). The noncytopathic characteristics and the absence of preexisting immunity to BuPV in human populations and livestock also provide a significant benefit for a possible use, e.g., as a vector vaccine platform.


Subject(s)
Pestivirus Infections/virology , Pestivirus/physiology , RNA, Viral , Viral Envelope Proteins/metabolism , Virus Replication , Gene Deletion , Gene Expression , Genes, Reporter , Genetic Engineering , Host-Pathogen Interactions , Pestivirus Infections/immunology , Replicon , Viral Envelope Proteins/genetics , Virion , Virus Assembly
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