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1.
Microb Cell Fact ; 20(1): 128, 2021 Jul 05.
Article En | MEDLINE | ID: mdl-34225717

BACKGROUND: The development of multiple gene expression systems, especially those based on the physical signals, such as multiple color light irradiations, is challenging. Complementary chromatic acclimation (CCA), a photoreversible process that facilitates the control of cellular expression using light of different wavelengths in cyanobacteria, is one example. In this study, an artificial CCA systems, inspired by type III CCA light-regulated gene expression, was designed by employing a single photosensor system, the CcaS/CcaR green light gene expression system derived from Synechocystis sp. PCC6803, combined with G-box (the regulator recognized by activated CcaR), the cognate cpcG2 promoter, and the constitutively transcribed promoter, the PtrcΔLacO promoter. RESULTS: One G-box was inserted upstream of the cpcG2 promoter and a reporter gene, the rfp gene (green light-induced gene expression), and the other G-box was inserted between the PtrcΔLacO promoter and a reporter gene, the bfp gene (red light-induced gene expression). The Escherichia coli transformants with plasmid-encoded genes were evaluated at the transcriptional and translational levels under red or green light illumination. Under green light illumination, the transcription and translation of the rfp gene were observed, whereas the expression of the bfp gene was repressed. Under red light illumination, the transcription and translation of the bfp gene were observed, whereas the expression of the rfp gene was repressed. During the red and green light exposure cycles at every 6 h, BFP expression increased under red light exposure while RFP expression was repressed, and RFP expression increased under green light exposure while BFP expression was repressed. CONCLUSION: An artificial CCA system was developed to realize a multiple gene expression system, which was regulated by two colors, red and green lights, using a single photosensor system, the CcaS/CcaR system derived from Synechocystis sp. PCC6803, in E. coli. The artificial CCA system functioned repeatedly during red and green light exposure cycles. These results demonstrate the potential application of this CCA gene expression system for the production of multiple metabolites in a variety of microorganisms, such as cyanobacteria.


Escherichia coli/genetics , Gene Expression Regulation, Bacterial , Gene Expression , Light , Escherichia coli/metabolism , Genes, Reporter , Luminescent Proteins/genetics , Phycobilins/biosynthesis , Phycobilins/genetics , Phycocyanin/biosynthesis , Phycocyanin/genetics , Promoter Regions, Genetic , Synechocystis/genetics , Synechocystis/metabolism , Transcription, Genetic , Transformation, Bacterial , Red Fluorescent Protein
2.
Proc Natl Acad Sci U S A ; 118(9)2021 03 02.
Article En | MEDLINE | ID: mdl-33627406

Marine Synechococcus cyanobacteria owe their ubiquity in part to the wide pigment diversity of their light-harvesting complexes. In open ocean waters, cells predominantly possess sophisticated antennae with rods composed of phycocyanin and two types of phycoerythrins (PEI and PEII). Some strains are specialized for harvesting either green or blue light, while others can dynamically modify their light absorption spectrum to match the dominant ambient color. This process, called type IV chromatic acclimation (CA4), has been linked to the presence of a small genomic island occurring in two configurations (CA4-A and CA4-B). While the CA4-A process has been partially characterized, the CA4-B process has remained an enigma. Here we characterize the function of two members of the phycobilin lyase E/F clan, MpeW and MpeQ, in Synechococcus sp. strain A15-62 and demonstrate their critical role in CA4-B. While MpeW, encoded in the CA4-B island and up-regulated in green light, attaches the green light-absorbing chromophore phycoerythrobilin to cysteine-83 of the PEII α-subunit in green light, MpeQ binds phycoerythrobilin and isomerizes it into the blue light-absorbing phycourobilin at the same site in blue light, reversing the relationship of MpeZ and MpeY in the CA4-A strain RS9916. Our data thus reveal key molecular differences between the two types of chromatic acclimaters, both highly abundant but occupying distinct complementary ecological niches in the ocean. They also support an evolutionary scenario whereby CA4-B island acquisition allowed former blue light specialists to become chromatic acclimaters, while former green light specialists would have acquired this capacity by gaining a CA4-A island.


Bacterial Proteins/metabolism , Light-Harvesting Protein Complexes/metabolism , Lyases/metabolism , Phycocyanin/biosynthesis , Phycoerythrin/biosynthesis , Pigments, Biological/biosynthesis , Synechococcus/metabolism , Acclimatization , Aquatic Organisms , Bacterial Proteins/genetics , Cloning, Molecular , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression Regulation, Bacterial , Genetic Complementation Test , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Genomic Islands , Light , Light-Harvesting Protein Complexes/genetics , Lyases/genetics , Phycobilins/biosynthesis , Phycobilins/genetics , Phycocyanin/genetics , Phycoerythrin/genetics , Phylogeny , Pigments, Biological/genetics , Protein Subunits/genetics , Protein Subunits/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Synechococcus/classification , Synechococcus/genetics , Synechococcus/radiation effects , Urobilin/analogs & derivatives , Urobilin/biosynthesis , Urobilin/genetics
3.
Mar Drugs ; 18(12)2020 Dec 04.
Article En | MEDLINE | ID: mdl-33291783

Cyanobacteria are essential for the vast number of compounds they produce and the possible applications in the pharmaceutical, cosmetical, and food industries. As Lyngbya species' characterization is limited in the literature, we characterize this cyanobacterium's growth and biomass. L. purpureum was grown and analyzed under different salinities, culture media, and incubation times to determine the best conditions that favor its cell growth and the general production of proteins, carbohydrates, lipids, and some pigments as phycocyanin and chlorophyll a. In this study, each analyzed biomolecule's highest content was proteins 431.69 mg g-1, carbohydrates 301.45 mg g-1, lipids 131.5 mg g-1, chlorophyll a 4.09 mg g-1, and phycocyanin 40.4 mg g-1. These results can provide a general context of the possible uses that can be given to biomass and give an opening to investigate possible biocompounds or bio metabolites that can be obtained from it.


Biomass , Lyngbya/drug effects , Lyngbya/genetics , Bacterial Proteins/biosynthesis , Carbohydrates/biosynthesis , Chlorophyll A/biosynthesis , Culture Media , Lipids/biosynthesis , Lyngbya/metabolism , Phycocyanin/biosynthesis , Saline Solution
4.
J Gen Appl Microbiol ; 66(2): 106-115, 2020 Jun 17.
Article En | MEDLINE | ID: mdl-32147625

The cyanobacterium Acaryochloris marina MBIC 11017 (A. marina 11017) possesses chlorophyll d (Chl. d) peaking at 698 nm as photosystem reaction center pigments, instead of chlorophyll a (Chl. a) peaking at 665 nm. About 95% of the total chlorophylls is Chl. d in A. marina 11017. In addition, A. marina 11017 possesses phycobilisome (PBS) supercomplex to harvest orange light and to transfer the absorbing energy to the photosystems. In this context, A. marina 11017 utilizes both far-red and orange light as the photosynthetic energy source. In the present study, we incubated A. marina 11017 cells under monochromatic orange and far-red light conditions and performed transcriptional and morphological studies by RNA-seq analysis and electron microscopy. Cellular absorption spectra, transcriptomic profiles, and microscopic observations demonstrated that PBS was highly accumulated under an orange light condition relative to a far-red light condition. Notably, transcription of one cpcBA operon encoding the phycobiliprotein of the phycocyanin was up-regulated under the orange light condition, but another operon was constitutively expressed under both conditions, indicating functional diversification of these two operons for light harvesting. Taking the other observations into consideration, we could illustrate the photoacclimation processes of A. marina 11017 in response to orange and far-red light conditions in detail.


Acclimatization , Chlorophyll/analysis , Cyanobacteria/physiology , Cyanobacteria/radiation effects , Phycocyanin/biosynthesis , Cyanobacteria/ultrastructure , Gene Expression Regulation, Bacterial , Light , Microscopy, Electron , Operon , RNA-Seq , Real-Time Polymerase Chain Reaction , Transcriptome
5.
Appl Microbiol Biotechnol ; 104(7): 3109-3119, 2020 Apr.
Article En | MEDLINE | ID: mdl-32060692

The extremophile red alga Galdieria sulphuraria was successfully grown immobilized in a twin-layer porous substrate bioreactor (TL-PSBR). A maximal biomass growth rate of 10 g dry weight m-2 day-1 was measured at a photon fluence rate of 200 µmol photons m-2 s-1 with addition of 1% CO2 and a temperature of 34 °C. Under these conditions, a maximal biomass value of 232 g m-2 was attained after 33 days of growth. Phycobilin productivity, however, was highest at a lower photon fluence rate of 100 µmol photons m-2 s-1 and reached a phycobilin value of 14 g m-2, a phycobilin content in the biomass of 63 mg g-1 and a phycobilin growth rate of 0.28 g m-2 day-1 for phycocyanin and 0.23 g m-2 day-1 for allophycocyanin. Addition of CO2 was essential to enhance growth and phycobilin production in G. sulphuraria and further optimization of the cultivation process in the TL-PSBR appears possible using a multi-phase approach, higher growth temperatures and optimization of nutrient supply. It is concluded that autotrophic cultivation of G. sulphuraria in a TL-PSBR is an attractive alternative to suspension cultivation for phycobilin production and applications in bioremediation.


Biomass , Photobioreactors , Phycobiliproteins/biosynthesis , Rhodophyta/growth & development , Rhodophyta/metabolism , Carbon Dioxide/metabolism , Cells, Immobilized , Culture Media/chemistry , Industrial Microbiology , Photons , Phycocyanin/biosynthesis , Phycocyanin/chemistry , Porosity , Temperature
6.
Microbiologyopen ; 9(3): e989, 2020 03.
Article En | MEDLINE | ID: mdl-31970933

Phycobiliproteins (PBPs) are colored fluorescent proteins present in cyanobacteria, red alga, and cryptophyta. These proteins have many potential uses in biotechnology going from food colorants to medical applications. Allophycocyanin, the simplest PBP, is a heterodimer of αß subunits that oligomerizes as a trimer (αß)3 . Each subunit contains a phycocyanobilin, bound to a cysteine residue, which is responsible for its spectroscopic properties. In this article, we are reporting the expression of recombinant allophycocyanin (rAPC) from the eukaryotic red algae Agarophyton chilensis in Escherichia coli, using prokaryotic accessory enzymes to obtain a fully functional rAPC. Three duet vectors were used to include coding sequences of α and ß subunits from A. chilensis and accessorial enzymes (heterodimeric lyase cpc S/U, heme oxygenase 1, phycocyanobilin oxidoreductase) from cyanobacteria Arthrospira maxima. rAPC was purified using several chromatographic steps. The characterization of the pure rAPC indicates very similar spectroscopic properties, λmaxAbs , λmaxEm , fluorescence lifetime, and chromophorylation degree, with native allophycocyanin (nAPC) from A. chilensis. This method, to produce high-quality recombinant allophycocyanin, can be used to express and characterize other macroalga phycobiliproteins, to be used for biotechnological or biomedical purposes.


Eukaryota/genetics , Phycocyanin/biosynthesis , Phycocyanin/genetics , Prokaryotic Cells/enzymology , Recombinant Proteins , Electrophoresis, Polyacrylamide Gel , Gene Expression , Genetic Vectors/genetics , Molecular Weight , Phycocyanin/isolation & purification , Spectrum Analysis
7.
Methods Mol Biol ; 1980: 173-179, 2020.
Article En | MEDLINE | ID: mdl-30484147

Phycocyanin is a blue-colored pigment-protein complex that exhibits numerous biofunctions such as anti-inflammation, antioxidation, antitumor, neuroprotective effect, and immunological enhancement. Purified phycocyanin has pharmaceutical and nutraceutical applications. In addition, as a nontoxic and non-carcinogenic natural coloring agent, phycocyanin has many applications in the food and cosmetic industries. This chapter describes a protocol for extraction and analytical grade purification of phycocyanin from cyanobacteria. The purification steps include (1) extraction of phycocyanin from biomass, (2) ammonium sulfate precipitation of phycocyanin and dialysis, and (3) purification of phycocyanin by gel filtration and ion-exchange chromatography.


Cyanobacteria/metabolism , Phycocyanin/biosynthesis , Phycocyanin/isolation & purification , Ammonium Sulfate , Chromatography, Gel , Chromatography, Ion Exchange , Fractional Precipitation , Liquid-Liquid Extraction , Phycocyanin/analysis
8.
Appl Biochem Biotechnol ; 191(2): 763-771, 2020 Jun.
Article En | MEDLINE | ID: mdl-31853878

Recombinant phycobiliprotein can be used as fluorescent label in immunofluorescence assay. In this study, pathway for phycocyanin beta subunit (CpcB) carrying noncognate chromophore phycoerythrobilin (PEB) and phycourobilin (PUB) was constructed in Escherichia coli. Lyase CpcS and CpcT could catalyze attachment of PEB to Cys84-CpcB and Cys155-CpcB, respectively. However, PEB was attached only to Cys84-CpcB when both CpcS and CpcT were present in E. coli. A dual plasmid expression system was used to control the expression of lyases and the attachment order of PEB to CpcB. The production of PEB-Cys155-CpcB was achieved by L-arabinose-induced expression of CpcS, CpcB, Ho1, and PebS, and then the attachment of PEB to Cys84-CpcB was achieved by IPTG-induced expression of CpcS. The doubly chromophorylated CpcB absorbed light maximally at 497.5 nm and 557.0 nm and fluoresced maximally at 507.5 nm and 566.5 nm. An amount of light energy absorbed by PUB-Cys155-CpcB is transferred to PEB-Cys84-CpcB in doubly chromophorylated CpcB, conferring a large stokes shift of 69 nm for this fluorescent protein. There are interactions between chromophores of CpcB which possibly together with the help of lyases lead to isomerization of PEB-Cys155-CpcB to PUB-Cys155-CpcB.


Escherichia coli/genetics , Escherichia coli/metabolism , Phycocyanin/biosynthesis , Phycocyanin/genetics , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial , Genes, Bacterial/genetics , Lyases/genetics , Phycobilins/genetics , Phycobiliproteins/genetics , Phycoerythrin/genetics , Plasmids , Urobilin/analogs & derivatives , Urobilin/genetics
9.
Curr Drug Metab ; 20(12): 967-976, 2019.
Article En | MEDLINE | ID: mdl-31775595

BACKGROUND: Cancer and other disorders such as inflammation, autoimmune diseases and diabetes are the major health problems observed all over the world. Therefore, identifying a therapeutic target molecule for the treatment of these diseases is urgently needed to benefit public health. C-Phycocyanin (C-PC) is an important light yielding pigment intermittently systematized in the cyanobacterial species along with other algal species. It has numerous applications in the field of biotechnology and drug industry and also possesses antioxidant, anticancer, antiinflammatory, enhanced immune function, including liver and kidney protection properties. The molecular mechanism of action of C-PC for its anticancer activity could be the blockage of cell cycle progression, inducing apoptosis and autophagy in cancer cells. OBJECTIVES: The current review summarizes an update on therapeutic applications of C-PC, its mechanism of action and mainly focuses on the recent development in the field of C-PC as a drug that exhibits beneficial effects against various human diseases including cancer and inflammation. CONCLUSION: The data from various studies suggest the therapeutic applications of C-PC such as anti-cancer activity, anti-inflammation, anti-angiogenic activity and healing capacity of certain autoimmune disorders. Mechanism of action of C-PC for its anticancer activity is the blockage of cell cycle progression, inducing apoptosis and autophagy in cancer cells. The future perspective of C-PC is to identify and define the molecular mechanism of its anti-cancer, anti-inflammatory and antioxidant activities, which would shed light on our knowledge on therapeutic applications of C-PC and may contribute significant benefits to global public health.


Phycocyanin/therapeutic use , Antineoplastic Agents/pharmacology , Cyanobacteria , Humans , Phycobilisomes , Phycocyanin/biosynthesis , Phycocyanin/chemistry
10.
Nat Commun ; 10(1): 3099, 2019 07 15.
Article En | MEDLINE | ID: mdl-31308373

The Gram-positive bacterium Bacillus subtilis exhibits complex spatial and temporal gene expression signals. Although optogenetic tools are ideal for studying such processes, none has been engineered for this organism. Here, we port a cyanobacterial light sensor pathway comprising the green/red photoreversible two-component system CcaSR, two metabolic enzymes for production of the chromophore phycocyanobilin (PCB), and an output promoter to control transcription of a gene of interest into B. subtilis. Following an initial non-functional design, we optimize expression of pathway genes, enhance PCB production via a translational fusion of the biosynthetic enzymes, engineer a strong chimeric output promoter, and increase dynamic range with a miniaturized photosensor kinase. Our final design exhibits over 70-fold activation and rapid response dynamics, making it well-suited to studying a wide range of gene regulatory processes. In addition, the synthetic biology methods we develop to port this pathway should make B. subtilis easier to engineer in the future.


Bacillus subtilis/enzymology , Bacterial Proteins/genetics , Gene Expression Regulation, Bacterial/radiation effects , Metabolic Engineering/methods , Optogenetics/methods , Phytochrome/genetics , Protein Kinases/genetics , Bacillus subtilis/genetics , Bacterial Proteins/metabolism , Light , Photoreceptors, Microbial , Phycobilins/biosynthesis , Phycocyanin/biosynthesis , Phytochrome/metabolism , Promoter Regions, Genetic/radiation effects , Protein Kinases/metabolism
11.
Int J Biol Macromol ; 137: 647-656, 2019 Sep 15.
Article En | MEDLINE | ID: mdl-31265852

In our study, we focused on the optimization; antioxidant and hepatoprotective potentials of novel pigment-protein complex(C-PC) isolated from Phormidium versicolor against cadmium induced liver injury in rats. From analysis, the C-PC extraction parameters were optimized using the response surface methodology (RSM) for optimal recoveries of C-PC extraction. For analysis, the optimum operational conditions for maximizing phycocyanins concentration (67.45mg/g DM) were found to be water/solid 2, temperature 32.5°C and pH7.2.This pigment was identified using HPLC and FTIR analysis. In addition, the molecular masses of α and ß subunits were 17 and 19kDa. Scavenging activity of superoxide anion, hydroxyl, nitric oxide radicals and metal chelating in vitro results indicated that C-PC has an excellent capacity as antioxidant. In vivo study, C-PC significantly prevented cadmium-induced elevation of ALAT, ASAT and bilirubin levels in rats. The histopathological observations supported the results serum enzymes assays. The results of this study revealed that C-PC has significant hepatoprotective potential. C-PC (50mgkg-1 body weight) significantly enhanced the levels of antioxidant enzymes. It can be concluded that C-PC possesses prevention action against hepatotoxicity caused by cadmium.


Biotechnology/methods , Cytoprotection/drug effects , Liver/drug effects , Microalgae/metabolism , Phycocyanin/biosynthesis , Phycocyanin/pharmacology , Animals , Antioxidants/isolation & purification , Antioxidants/metabolism , Antioxidants/pharmacology , Cadmium/toxicity , Glycosylation/drug effects , Hydrogen-Ion Concentration , Liver/cytology , Liver/injuries , Liver/metabolism , Phycocyanin/isolation & purification , Rats , Temperature
12.
Bioresour Technol ; 291: 121801, 2019 Nov.
Article En | MEDLINE | ID: mdl-31326685

Achieving high biomass productivity is critical for establishing a successful large-scale algal facility. Microalgae cultures in raceway ponds are normally light limited. To achieve high biomass productivity, there is a need to develop a system to deliver light into the depth of microalgal cultures in raceway ponds. We investigated red and blue luminescent solar concentrators (LSCs) in outdoor raceway ponds to downgrade the sunlight, re-emit and, deliver it into the depth of Arthrospira platensis culture operated at 21 cm depth. When red LSCs were used, the biomass productivity (12.2 g m-2 d-1) and phycocyanin productivity (8.5 mg L-1 d-1) of A. platensis increased 26% and 44%, respectively. However, using blue LSCs resulted in no significant increase in A. platensis biomass productivity. Therefore, for generating same phycocyanin productivity using red LSCs, 44% less cultivation area would be required. This can lead to a significant reduction in the cost of phycocyanin production.


Biomass , Phycocyanin/biosynthesis , Ponds/microbiology , Spirulina/metabolism , Color , Luminescence , Microalgae/metabolism , Sunlight
13.
Appl Biochem Biotechnol ; 187(1): 129-139, 2019 Jan.
Article En | MEDLINE | ID: mdl-29911264

This study focused on the evaluation of mixotrophic and heterotrophic production of phycocyanin by A. microscopica, analysis of kinetic parameters, the effect of freezing and thawing on phycocyanin yield, and nutrient removal during heterotrophic growth. During mixotrophic growth, maximum phycocyanin yield (1.50 mgphycocyanin g-1biomass) was obtained after 12 h, while the heterotrophic cultivation yielded 1.39 mgphycocyanin g-1biomass. The mixotrophic cultivation of A. microscopica showed maximum specific growth rate of 0.025 h-1, against 0.010 h-1 for the photoautotrophic cultivation, and 0.08 h-1 in heterotrophic conditions. The mixotrophic cultivation had a specific rate of phycocyanin production of 9.86 mgphycocyanin mgbiomass-1 h-1, while the photoautotrophic had 2.81 mgphycocyanin mgbiomass-1 h-1, and the heterotrophic, 49.18 mgphycocyanin mgbiomass-1 h-1. Carbon and nitrogen contents present in sugarcane vinasse were decreased in 16.69 and 15.97%, respectively, after 6 h of heterotrophic growth. Thus, it was shown that the mixotrophic production of phycocyanin by Aphanothece microscopica Nägeli in BG11 medium supplemented with vinasse is feasible.


Culture Media/chemistry , Cyanobacteria/growth & development , Phycocyanin/biosynthesis , Saccharum/chemistry
14.
Ecotoxicol Environ Saf ; 157: 369-379, 2018 Aug 15.
Article En | MEDLINE | ID: mdl-29631092

The present study deals with impact of varied doses of arsenite (AsIII; 50, 100 and 150 µM) and arsenate (AsV; 50, 100 and 150 mM) on growth, photosynthetic pigments, photochemistry of photosystem II, oxidative biomarkers, (O2•¯, H2O2 and MDA equivalents contents) and activity of antioxidant enzymes in diazotrophic cyanobacterium Nostoc muscorum after 48 and 96 h of the treatments. The reduction in growth, pigment contents (Chl a, Phy and Car) and PS II photochemistry was found to increase with enhanced accumulation of test metal in cells, and the damaging effect on photosynthetic pigments showed the order (Phy > chl a> Car). The negative effect on PS II photochemistry was due to significant decrease in the value of JIP kinetics ϕP0, FV/F0, ϕE0,Ψ0 and PIABS except F0/FV and significant rise in values of energy flux parameters such as ABS/RC, TR0/RC, ET0/RC and DI0/RC. Both the species of arsenic caused significant rise in oxidative biomarkers as evident by in vitro and in vivo analysis of (O2•¯, H2O2 and MDA equivalents contents) despite of appreciable rise in the activity antioxidative enzymes such as SOD, POD, CAT and GST. The study concludes that in among both forms of arsenic, arsenite effect was more dominant on growth, photosynthetic pigments; oxidative stress biomarkers as evident by weak induction of anti-oxidative defense system to overcome the stress as compared to arsenate.


Antioxidants/analysis , Arsenates/toxicity , Arsenites/toxicity , Chlorophyll/biosynthesis , Nostoc muscorum/drug effects , Toxicity Tests , Carotenoids/biosynthesis , Chlorophyll A , Dose-Response Relationship, Drug , Fluorescence , Hydrogen Peroxide , Nostoc muscorum/metabolism , Oxidative Stress/drug effects , Photochemistry , Photosynthesis , Photosystem II Protein Complex , Phycocyanin/biosynthesis , Reactive Oxygen Species/metabolism
15.
Proc Natl Acad Sci U S A ; 114(45): 11962-11967, 2017 11 07.
Article En | MEDLINE | ID: mdl-29078307

Optogenetics is a powerful tool to precisely manipulate cell signaling in space and time. For example, protein activity can be regulated by several light-induced dimerization (LID) systems. Among them, the phytochrome B (PhyB)-phytochrome-interacting factor (PIF) system is the only available LID system controlled by red and far-red lights. However, the PhyB-PIF system requires phycocyanobilin (PCB) or phytochromobilin as a chromophore, which must be artificially added to mammalian cells. Here, we report an expression vector that coexpresses HO1 and PcyA with Ferredoxin and Ferredoxin-NADP+ reductase for the efficient synthesis of PCB in the mitochondria of mammalian cells. An even higher intracellular PCB concentration was achieved by the depletion of biliverdin reductase A, which degrades PCB. The PCB synthesis and PhyB-PIF systems allowed us to optogenetically regulate intracellular signaling without any external supply of chromophores. Thus, we have provided a practical method for developing a fully genetically encoded PhyB-PIF system, which paves the way for its application to a living animal.


Ferredoxin-NADP Reductase/biosynthesis , Ferredoxins/biosynthesis , Heme Oxygenase (Decyclizing)/biosynthesis , Optogenetics , Oxidoreductases Acting on CH-CH Group Donors/genetics , Oxidoreductases/biosynthesis , Phycobilins/biosynthesis , Phycocyanin/biosynthesis , Cell Line, Tumor , Genetic Vectors/genetics , HeLa Cells , Humans , Light , Phycobilins/genetics , Phycocyanin/genetics , Signal Transduction/genetics
16.
Nucleic Acids Res ; 45(15): 9193-9205, 2017 Sep 06.
Article En | MEDLINE | ID: mdl-28911120

Highly regulated induction systems enabling dose-dependent and reversible fine-tuning of protein expression output are beneficial for engineering complex biosynthetic pathways. To address this, we developed PhiReX, a novel red/far-red light-regulated protein expression system for use in Saccharomyces cerevisiae. PhiReX is based on the combination of a customizable synTALE DNA-binding domain, the VP64 activation domain and the light-sensitive dimerization of the photoreceptor PhyB and its interacting partner PIF3 from Arabidopsis thaliana. Robust gene expression and high protein levels are achieved by combining genome integrated red light-sensing components with an episomal high-copy reporter construct. The gene of interest as well as the synTALE DNA-binding domain can be easily exchanged, allowing the flexible regulation of any desired gene by targeting endogenous or heterologous promoter regions. To allow low-cost induction of gene expression for industrial fermentation processes, we engineered yeast to endogenously produce the chromophore required for the effective dimerization of PhyB and PIF3. Time course experiments demonstrate high-level induction over a period of at least 48 h.


Arabidopsis Proteins/genetics , Basic Helix-Loop-Helix Transcription Factors/genetics , DNA-Binding Proteins/genetics , Genetic Engineering/methods , Homeodomain Proteins/genetics , Phytochrome B/genetics , Saccharomyces cerevisiae/genetics , Arabidopsis/chemistry , Arabidopsis/genetics , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Basic Helix-Loop-Helix Transcription Factors/metabolism , DNA-Binding Proteins/metabolism , Gene Expression , Genetic Vectors/chemistry , Genetic Vectors/metabolism , Green Fluorescent Proteins/genetics , Green Fluorescent Proteins/metabolism , Homeodomain Proteins/metabolism , Light , Light Signal Transduction , Phycobilins/biosynthesis , Phycobilins/genetics , Phycocyanin/biosynthesis , Phycocyanin/genetics , Phytochrome B/metabolism , Plasmids/chemistry , Plasmids/metabolism , Promoter Regions, Genetic , Protein Multimerization , Saccharomyces cerevisiae/metabolism , Saccharomyces cerevisiae/radiation effects
17.
New Phytol ; 214(3): 1145-1157, 2017 May.
Article En | MEDLINE | ID: mdl-28106912

Land plant phytochromes perceive red and far-red light to control growth and development, using the linear tetrapyrrole (bilin) chromophore phytochromobilin (PΦB). Phytochromes from streptophyte algae, sister species to land plants, instead use phycocyanobilin (PCB). PCB and PΦB are synthesized by different ferredoxin-dependent bilin reductases (FDBRs): PΦB is synthesized by HY2, whereas PCB is synthesized by PcyA. The pathway for PCB biosynthesis in streptophyte algae is unknown. We used phylogenetic analysis and heterologous reconstitution of bilin biosynthesis to investigate bilin biosynthesis in streptophyte algae. Phylogenetic results suggest that PcyA is present in chlorophytes and prasinophytes but absent in streptophytes. A system reconstituting bilin biosynthesis in Escherichia coli was modified to utilize HY2 from the streptophyte alga Klebsormidium flaccidum (KflaHY2). The resulting bilin was incorporated into model cyanobacterial photoreceptors and into phytochrome from the early-diverging streptophyte alga Mesostigma viride (MvirPHY1). All photoreceptors tested incorporate PCB rather than PΦB, indicating that KflaHY2 is sufficient for PCB synthesis without any other algal protein. MvirPHY1 exhibits a red-far-red photocycle similar to those seen in other streptophyte algal phytochromes. These results demonstrate that streptophyte algae use HY2 to synthesize PCB, consistent with the hypothesis that PΦB synthesis arose late in HY2 evolution.


Algal Proteins/metabolism , Chlorophyta/metabolism , Phycobilins/biosynthesis , Phycocyanin/biosynthesis , Phytochrome/metabolism , Escherichia coli/metabolism , Ferredoxins/metabolism , Oxidoreductases/metabolism , Phycobilins/chemistry , Phycobilins/metabolism , Phycocyanin/chemistry , Phycocyanin/metabolism , Phylogeny , Protein Denaturation
18.
Bioresour Technol ; 227: 164-170, 2017 Mar.
Article En | MEDLINE | ID: mdl-28024193

Nostoc sp. NK (KCTC 12772BP) was isolated and cultivated in a BG11 medium and a nitrate-free BG11 medium (BG110). To enhance C-phycocyanin (C-PC) content in the cells, different fluorescent lamps (white, plant, and red) were used as light sources for complementary chromatic adaptation (CCA). The maximum biomass productivity was 0.42g/L/d and 0.32g/L/d under BG11 and BG110 conditions, respectively. The maximum C-PC contents were 8.4% (w/w) under white lamps, 13.6% (w/w) under plant lamps, and 18% (w/w) under BG110 and the red light condition. The maximum C-PC productivity was 57.4mg/L/d in BG110 under the red lamp condition. These results indicate that a higher C-PC content could be obtained under a diazotrophic condition and a CCA reaction. The C-PC could be released naturally from cells without any extraction processes, when Nostoc sp. NK was cultivated in the BG110 medium with CO2 aeration and put in dark conditions at 5°C.


Chemical Fractionation/methods , Industrial Microbiology/methods , Nostoc/metabolism , Phycocyanin/biosynthesis , Adaptation, Physiological , Biomass , Culture Media , Lighting , Nitrogen/metabolism , Nitrogen Fixation , Phycocyanin/isolation & purification
19.
Bioresour Technol ; 218: 272-8, 2016 Oct.
Article En | MEDLINE | ID: mdl-27372006

A novel cultivation strategy called "Sequential Heterotrophy-Dilution-Photoinduction" was successfully applied in the cultivation of Galdieria sulphuraria for efficient production of phycocyanin (PC). Algae cells were firstly cultivated heterotrophically to achieve high cell density. The maximal dry cell weight of 17.8gL(-1) and maximal biomass productivity of 103.1mgL(-1)h(-1) were obtained. Then, a dilution step was applied to obtain a suitable cell concentration and finally these cells were transferred to high light condition for phycocyanin accumulation. During the photoinduction step, cells could accumulate phycocyanin up to 13.88% of dry cell weight in a cultivation period of 8days. By this technology, total PC productivity far surpassed those reported in all literatures of Galdieria sulphuraria, and was 147-fold and 12-fold of those in photoautotrophic and heterotrophic technologies, respectively. Therefore, this strategy provides a promising approach for high-efficient phycocyanin production from Galdieria sulphuraria to meet its mass cultivation and commercialization application.


Phycocyanin/biosynthesis , Rhodophyta/metabolism , Biomass , Heterotrophic Processes , Rhodophyta/growth & development
20.
Int J Biol Macromol ; 88: 88-92, 2016 Jul.
Article En | MEDLINE | ID: mdl-27018231

Allophycocyanin (APC) is generally used as fluorescent labels. In this study, apcA genes from a mesophilic cyanobacterium Synechocystis sp. PCC 6803 and a thermophilic cyanobacterium Thermosynechococcus elongatus BP-1 were cloned into expression vectors to construct pathway for biosynthesis of allophycocyanin holo-α subunits (named as holo-ApcAS for Synechocystis sp. PCC 6803 and holo-ApcAT for T. elongatus BP-1) in Escherichia coli. The two holo-ApcAs were successfully reconstituted in E. coli and purified by metal affinity chromatography. Spectral analysis showed that the two proteins have similar spectroscopic properties, with absorbance maximum both at 614nm and emission maximum at 639nm for holo-ApcAS and 638nm for holo-ApcAT. At high temperature, the recombinant holo-ApcAT was much more stable than the recombinant holo-ApcAS. Holo-ApcAS was most fluorescent at pH 8.5 and stable in pH range of 6.0-9.0 while holo-ApcAT was most fluorescent at pH 6.0 and stable in pH range of 5.0-7.0, with residual fluorescence intensity no less than 90% of the maximum fluorescence. These findings will pave the way for further protein engineering to achieve high stable APC from extremophiles.


Cyanobacteria/chemistry , Phycocyanin/biosynthesis , Protein Subunits/biosynthesis , Synechocystis/chemistry , Chromatography, Affinity , Cloning, Molecular , Escherichia coli/genetics , Escherichia coli/metabolism , Fluorescence , Gene Expression , Hot Temperature , Hydrogen-Ion Concentration , Phycocyanin/chemistry , Phycocyanin/genetics , Phycocyanin/isolation & purification , Protein Stability , Protein Subunits/chemistry , Protein Subunits/genetics , Protein Subunits/isolation & purification , Recombinant Proteins/biosynthesis , Recombinant Proteins/chemistry , Recombinant Proteins/genetics , Recombinant Proteins/isolation & purification
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