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1.
Biomed Pharmacother ; 145: 112457, 2022 Jan.
Article in English | MEDLINE | ID: mdl-34864611

ABSTRACT

Research on the bioactive components of herbal medicines have been conducted mainly on the secondary metabolites of herbal plants. Accordingly, limited information is available on primary metabolites (carbohydrates, amino acids, lipids, and nucleic acids) and their biological effects. Here, we focused on the heat-resistant RNA of a decoction of Glycyrrhizae Radix and showed its immunostimulatory effects. The RNA activated NF-κB/AP-1 and induced TNF-α production in murine macrophages. Further analysis revealed that the RNA was around 90 nucleotides long. RNA sequencing (RNA-Seq) by next generation sequencing (NGS) showed that approximately 30% of the NGS reads were mapped to the genome of Glycyrrhiza uralensis, which is plant material of Glycyrrhizae Radix. Further analysis of the other 70% of reads indicated that the RNA contained RNA sequences that could be mapped to various microorganisms. Together, these results propose nucleic acids as a new research field in the bioactive components of herbal medicines.


Subject(s)
Drugs, Chinese Herbal/pharmacology , Glycyrrhiza/genetics , Phytochemicals , Animals , Glycyrrhizic Acid/pharmacology , High-Throughput Nucleotide Sequencing/methods , Macrophages/metabolism , Mice , NF-kappa B/metabolism , Phytochemicals/genetics , Phytochemicals/pharmacology , Plant Extracts/pharmacology , Plants, Medicinal/chemistry , Tumor Necrosis Factor-alpha/metabolism
2.
Eur Rev Med Pharmacol Sci ; 25(1 Suppl): 43-48, 2021 12.
Article in English | MEDLINE | ID: mdl-34890033

ABSTRACT

OBJECTIVE: Lemna minor is a plant with a huge repertoire of secondary metabolites. The literature indicates that extracts of Lemna minor have antioxidant, antiradical, immunomodulatory and anti-inflammatory properties. The objective of the present study was to find a suitable technique to extract active compounds from this plant and verify whether these extracts have immunomodulatory activity. MATERIALS AND METHODS: We grew L. minor on a standard medium with Gamborg B5 and vitamins. We extracted compounds from the plant by maceration and decoction. The phytochemical profile of the extracts was characterized by chromatography, spectrophotometry, and spectroscopy. The extracts were tested on cultures of mononuclear cells from four human subjects. These cells were pulsed with carboxyfluorescein succinimidyl ester, grown in triplicate in standard culture medium without (control) and with increasing concentrations of Lemna extracts. Flow cytometry was used to evaluate cell death and proliferation of the total mononuclear cell population and of CD4+, CD8+, B cell and monocyte populations. RESULTS: The Lemna extracts were not cytotoxic and did not cause cell necrosis or apoptosis in immune cells. At low concentrations, they induced very limited proliferation of CD4+ cells within 48 hours. At high concentrations, they induced proliferation of CD8+ cells and B lymphocytes within 48 hours. CONCLUSIONS: Unfortunately, we failed to confirm any immunomodulatory activity of Lemna extracts. Growth and death rates of human immune cells were not significantly affected by adding Lemna extracts to the culture medium.


Subject(s)
Araceae , Immunomodulation/drug effects , Immunomodulation/immunology , Leukocytes, Mononuclear/drug effects , Leukocytes, Mononuclear/immunology , Plant Extracts/pharmacology , Araceae/genetics , Cells, Cultured , Humans , Phytochemicals/genetics , Phytochemicals/isolation & purification , Phytochemicals/pharmacology , Plant Extracts/genetics , Plant Extracts/isolation & purification
3.
Int J Mol Sci ; 22(20)2021 Oct 15.
Article in English | MEDLINE | ID: mdl-34681782

ABSTRACT

Thyme species are a good source of thymol and carvacrol, which play a key role in controlling diseases. For the first time, the expression patterns of γ-terpinene synthase (TPS2), CYP71D178, and CYP71D180 genes and the amount of phenolics compounds were evaluated in T. migricus and T. daenensis after different methyl jasmonate (MeJA) treatments. The highest thymol and carvacrol contents were observed in T. migricus (86.27%) and T. daenensis (17.87%) at MeJA 100 µM, which was consistent with the expression patterns of the three investigated genes. All species treated showed high total phenolic and flavonoid content compared to control plants for which the highest amounts were observed in T. vulgaris treated with 100 µM and 10 µM MeJA. Furthermore, in the 100 µM MeJA treatment, the relative expression of TPS2 and CYP71D178 in T. migricus increased 7.47 and 9.86-fold compared with the control, respectively. The highest level of CYP71D180 transcripts (5.15-fold) was also observed for T. daenensis treated. This finding highlights the notion that thymol was known as the dominant component of the essential oil rather than carvacrol in diffident thyme species. This implies that MeJA at different concentrations influenced metabolic pathways and induced expression changes, resulting in a rise in essential oil levels.


Subject(s)
Acetates/pharmacology , Cyclopentanes/pharmacology , Cymenes/metabolism , Oxylipins/pharmacology , Phytochemicals , Thymol/metabolism , Thymus Plant , Biosynthetic Pathways/drug effects , Biosynthetic Pathways/genetics , Gene Expression Regulation, Plant/drug effects , Genes, Plant/drug effects , Genes, Plant/genetics , Iran , Phytochemicals/genetics , Phytochemicals/metabolism , Species Specificity , Thymus Plant/chemistry , Thymus Plant/drug effects , Thymus Plant/genetics , Thymus Plant/metabolism
4.
Biomolecules ; 11(6)2021 06 17.
Article in English | MEDLINE | ID: mdl-34204200

ABSTRACT

Polyploidy plays an important role in plant diversification and speciation. The ploidy level of plants is associated with morphological and biochemical characteristics, and its modification has been used as a strategy to alter the quantitative and qualitative patterns of secondary metabolite production in different medicinal plants. Polyploidization can be induced by many anti-mitotic agents, among which colchicine, oryzalin, and trifluralin are the most common. Other variables involved in the induction process include the culture media, explant types, and exposure times. Due to the effects of polyploidization on plant growth and development, chromosome doubling has been applied in plant breeding to increase the levels of target compounds and improve morphological characteristics. Prompted by the importance of herbal medicines and the increasing demand for drugs based on plant secondary metabolites, this review presents an overview of how polyploidy can be used to enhance metabolite production in medicinal plants.


Subject(s)
Colchicine/pharmacology , Phytochemicals , Plant Breeding , Plants, Medicinal , Polyploidy , Phytochemicals/biosynthesis , Phytochemicals/genetics , Plants, Medicinal/genetics , Plants, Medicinal/metabolism
5.
Mol Biol Rep ; 48(3): 2619-2628, 2021 Mar.
Article in English | MEDLINE | ID: mdl-33792827

ABSTRACT

Fabaceae, the third-largest Angiosperm family, exhibits great morphological diversity with significantly high species diversification rate. Albizia, one of the largest genera of the legume family, possesses high ecological, economical and medicinal application prospects and displays a global distribution. The taxonomic classification among Albizia remains, however, unclear and has been subjected to changes. The resolution of phylogenetic relationships among members of genus Albizia is a priority. Nine Albizia species cultivated in Egypt; Albizia lebbeck, A. julibrissin, A. odoratissima, A. procera, A. anthelmintica, A. guachapele, A. myriophylla, A. richardiana and A. lucida were subjected to molecular classification via DNA fingerprinting techniques viz. Inter Simple Sequence Repeat (ISSR) and Start Codon Targeted polymorphism (SCoT) using ten primers, five for each technique. The total number of bands produced by ISSR and SCoT primers was 28 and 40, respectively. The percentage of polymorphism varied from 64.28% in ISSR to 67.50% in SCoT analysis. Additionally, chemotaxonomic analysis was implemented based on UV spectroscopic profiling and total phenolic content coupled to unsupervised chemometric tools; Principal Component Analysis (PCA) and Hierarchical Cluster Analysis (HCA). Interspecific relationships were confirmed via molecular and phytochemical analyses between A. procera and A. guachapele; A. lebbeck and A. odoratissima; and A. julibrissin and A. lucida. The study reveals that chemotaxonomic data can reflect phylogenetic relationships among examined Albizia species and provides insights to the significance of utilizing the strengths of both molecular taxonomy and chemotaxonomy to resolve phylogenetic relationship among this genus which offers baseline for breeding programs. Future strategies to enrich taxonomic classification among Albizia includes extensive morphological characterization, DNA barcoding techniques and metabolomic profiling.


Subject(s)
Albizzia/classification , Albizzia/genetics , Phylogeny , Phytochemicals/genetics , Plant Breeding , Cluster Analysis , Microsatellite Repeats/genetics , Multivariate Analysis , Phenols/analysis , Spectrophotometry, Ultraviolet
6.
J Nutr Biochem ; 92: 108615, 2021 06.
Article in English | MEDLINE | ID: mdl-33705954

ABSTRACT

Vegetables are essential protective diet ingredients that supply ample amounts of minerals, vitamins, carbohydrates, proteins, dietary fiber, and various nutraceutical compounds for protection against various disease conditions. Color is the most important quality parameter for the farmers to access the harvest maturity while for the consumer's reliable indices to define acceptability or rejection. The colored vegetables contain functional compounds like chlorophylls, carotenoids, betalains, anthocyanins, etc. well recognized for their antioxidant, antimicrobial, hypolipidemic, neuroprotective, antiaging, diuretic, and antidiabetic properties. Recently, there has been a shift in food consumption patterns from processed to semi-processed or fresh fruits and vegetables to ensure a healthy disease-free life. This shifted the focus of agriculture scientists and food processors from food security to nutrition security. This has resulted in recent improvements to existing crops like blue tomato, orange cauliflower, colored and/or black carrots, with improved color, and thus enriched bioactive compounds. Exhaustive laboratory trials though are required to document and establish their minimum effective concentrations, bioavailability, and specific health benefits. Efforts should also be directed to breed color-rich cultivars or to improve the existing varieties through conventional and molecular breeding approaches. The present review has been devoted to a better understanding of vegetable colors with specific health benefits and to provide in-hand information about the effect of specific pigment on body organs, the effect of processing on their bioavailability, and recent improvements in colors to ensure a healthy lifestyle.


Subject(s)
Phytochemicals/analysis , Pigments, Biological/analysis , Vegetables/chemistry , Diet, Healthy , Functional Food , Genes, Plant , Humans , Phytochemicals/genetics , Pigments, Biological/genetics , Plant Breeding , Plants, Genetically Modified/chemistry , Plants, Genetically Modified/genetics , Plants, Genetically Modified/growth & development , Vegetables/genetics , Vegetables/growth & development
7.
J Evol Biol ; 34(3): 571-583, 2021 03.
Article in English | MEDLINE | ID: mdl-33484000

ABSTRACT

We examine the extent to which phylogenetic effects and ecology are associated with macroevolutionary patterns of phytochemical defence production across the Mimulus phylogeny. We grew plants from 21 species representing the five major sections of the Mimulus phylogeny in a common garden to assess how the arsenals (NMDS groupings) and abundances (concentrations) of a phytochemical defence, phenylpropanoid glycosides (PPGs), vary across the phylogeny. Very few PPGs are widespread across the genus, but many are common to multiple sections of the genus. Phytochemical arsenals cluster among sections in an NMDS and are not associated with total concentration of PPGs. There is a strong phylogenetic signal for phytochemical arsenal composition across the Mimulus genus, whereas ecological variables such as growing season length, latitude, and elevation do not significantly influence arsenal. In contrast, there is little phylogenetic signal for total PPG concentration, and this trait is significantly influenced by several ecological factors. Phytochemical arsenals and abundances are influenced by plant life history form. Both phylogenetic effects and ecology are related to phytochemical patterns across species, albeit in different ways. The independence of phytochemical defence concentrations from arsenal compositions indicates that these aspects of defence may continue to evolve independently of one another.


Subject(s)
Mimulus/genetics , Phylogeny , Phytochemicals/genetics , Secondary Metabolism/genetics , Ecosystem , Glycosides/metabolism , Mimulus/chemistry , Mimulus/metabolism , Propanols/metabolism
8.
Chem Biodivers ; 18(2): e2000911, 2021 Feb.
Article in English | MEDLINE | ID: mdl-33438342

ABSTRACT

Thymus is one of the most important genera of the Lamiaceae family. This work was performed to assess inter and intra species variation, which is an indispensable prerequisite for the selection and the exploitation of the germplasm, using yield, secondary metabolites, and ploidy level criteria. Nineteen Iranian populations belonging to 11 Thymus species which includes T. vulgaris were used in this study. The results of cytological observations on the 19 populations revealed the three root-tip chromosome numbers of 2n=2x=30, 2n=4x=56 or 60 (diploid and tetraploid). This study also presents the results of a two-year field experiment that evaluates the agronomic and morphology of the 19 populations of Thymus spp. Cluster analysis grouped the populations into six groups and explained the relationships among ploidy levels, morphological traits, and essential oils (EOs). In general, diploid species belonged to the thymol chemotype, whilst carvacrol chemotype consistently dependent on the gene-dosage effect. Thymus migricus, T. daenensis-2, T. serpyllum, and T. trautvetteri populations with diverse thymol background were the best selection as the parents to improve thymol in a breeding program. Moreover, dry and fresh weight criteria can be used to improve EO content in thyme. Achieving this goal would be expected by crossing T. migricus and T. daenensis-2. Finally, providing relevant information on the ploidy level of Thymus species, with emphasis on morphology and EO components variations, may be recommended for the selection of populations or species to improve bioactive components as well as morphological traits in future breeding programs.


Subject(s)
Phytochemicals/chemistry , Thymus Plant/chemistry , Chromosomes, Plant/genetics , Diploidy , Iran , Phytochemicals/genetics , Polyploidy , Thymol/chemistry , Thymus Plant/genetics
9.
Curr Pharm Biotechnol ; 22(3): 341-359, 2021.
Article in English | MEDLINE | ID: mdl-32469697

ABSTRACT

BACKGROUND: Noncoding RNAs (ncRNAs), such as microRNAs (miRNAs), small interfering RNAs (siRNAs) and long noncoding RNAs (lncRNAs), play significant regulatory roles in plant development and secondary metabolism and are involved in plant response to biotic and abiotic stresses. They have been intensively studied in model systems and crops for approximately two decades and massive amount of information have been obtained. However, for medicinal plants, ncRNAs, particularly their regulatory roles in bioactive compound biosynthesis, are just emerging as a hot research field. OBJECTIVE: This review aims to summarize current knowledge on herbal ncRNAs and their regulatory roles in bioactive compound production. RESULTS: So far, scientists have identified thousands of miRNA candidates from over 50 medicinal plant species and 11794 lncRNAs from Salvia miltiorrhiza, Panax ginseng, and Digitalis purpurea. Among them, more than 30 miRNAs and five lncRNAs have been predicted to regulate bioactive compound production. CONCLUSION: The regulation may achieve through various regulatory modules and pathways, such as the miR397-LAC module, the miR12112-PPO module, the miR156-SPL module, the miR828-MYB module, the miR858-MYB module, and other siRNA and lncRNA regulatory pathways. Further functional analysis of herbal ncRNAs will provide useful information for quality and quantity improvement of medicinal plants.


Subject(s)
Phytochemicals/biosynthesis , Phytochemicals/genetics , Plants, Medicinal/genetics , RNA, Long Noncoding/biosynthesis , RNA, Long Noncoding/genetics , Animals , Humans , MicroRNAs/biosynthesis , MicroRNAs/genetics , Plants, Medicinal/metabolism , RNA, Small Interfering/biosynthesis , RNA, Small Interfering/genetics , Stress, Physiological/physiology
10.
Gene ; 773: 145385, 2021 Mar 20.
Article in English | MEDLINE | ID: mdl-33383117

ABSTRACT

Tephrosia purpurea (T. purpurea), a plant belonging to Fabaceae (pea) family, is a well-known Ayurvedic herb and commonly known as Sarapunkha in traditional Indian medicinal system. Described as "Sarwa wranvishapaka", i.e. having a capability to heal all types of wounds, it is particularly recognized for its usage in splenomegaly. Towards exploring the comprehensive effects of T. purpurea against polycystic ovarian syndrome (PCOS) and three comorbid neuropsychiatric diseases (anxiety, depression, and bipolar disorder), its constituent phytochemicals (PCs) were extensively reviewed and their network pharmacology evaluation was carried out in this study. The complex regulatory potential of its 76 PCs against PCOS is enquired by developing and analyzing high confidence tripartite networks of protein targets of each phytochemical at both pathway and disease association scales. We also developed a high-confidence human Protein-Protein Interaction (PPI) sub-network specific to PCOS, explored its modular architecture, and probed 30 drug-like phytochemicals (DPCs) having multi-module regulatory potential. The phytochemicals showing good binding affinity towards their protein targets were also evaluated for similarity against currently available approved drugs present in DrugBank. Multi-targeting and synergistic capacities of 12 DPCs against 10 protein targets were identified and evaluated using molecular docking and interaction analyses. Eight DPCs as a potential source of PCOS and its comorbidity regulators are reported in T. purpurea. The results of network-pharmacology study highlight the therapeutic relevance of T. purpurea as PCOS-regulator and demonstrate the effectiveness of the approach in revealing action-mechanism of Ayurvedic herbs from holistic perspective.


Subject(s)
Medicine, Ayurvedic , Phytochemicals/therapeutic use , Polycystic Ovary Syndrome/drug therapy , Tephrosia/chemistry , Anxiety/drug therapy , Anxiety/psychology , Bipolar Disorder/drug therapy , Depression/drug therapy , Depression/psychology , Female , Humans , Mental Disorders/drug therapy , Molecular Docking Simulation , Phytochemicals/chemistry , Phytochemicals/genetics , Polycystic Ovary Syndrome/genetics , Polycystic Ovary Syndrome/pathology , Polycystic Ovary Syndrome/psychology , Protein Interaction Maps/drug effects , Protein Interaction Maps/genetics , Splenomegaly/drug therapy , Splenomegaly/psychology
11.
Sci Rep ; 10(1): 20197, 2020 11 19.
Article in English | MEDLINE | ID: mdl-33214566

ABSTRACT

Phenylpropanoids are a large class of plant secondary metabolites, which play essential roles in human health mainly associated with their antioxidant activity. Strawberry (Fragaria × ananassa) is a rich source of phytonutrients, including phenylpropanoids, which have been shown to have beneficial effects on human health. In this study, using the F. × ananassa '232' × '1392' F1 segregating population, we analyzed the genetic control of individual phenylpropanoid metabolites, total polyphenol content (TPC) and antioxidant capacity (TEAC) in strawberry fruit over two seasons. We have identified a total of 7, 9, and 309 quantitative trait loci (QTL) for TPC, TEAC and for 77 polar secondary metabolites, respectively. Hotspots of stable QTL for health-related antioxidant compounds were detected on linkage groups LG IV-3, LG V-2 and V-4, and LG VI-1 and VI-2, where associated markers represent useful targets for marker-assisted selection of new varieties with increased levels of antioxidant secondary compounds. Moreover, differential expression of candidate genes for major and stable mQTLs was studied in fruits of contrasting lines in important flavonoids. Our results indicate that higher expression of FaF3'H, which encodes the flavonoid 3'-hydroxylase, is associated with increased content of these important flavonoids.


Subject(s)
Antioxidants/metabolism , Fragaria/genetics , Fruit/metabolism , Phytochemicals/genetics , Polyphenols/genetics , Chromosome Mapping , Fragaria/metabolism , Genotype , Phytochemicals/metabolism , Polyphenols/metabolism , Quantitative Trait Loci
12.
Mol Phylogenet Evol ; 151: 106858, 2020 10.
Article in English | MEDLINE | ID: mdl-32473334

ABSTRACT

Insect olfactory systems have evolved to recognize phytochemicals and respond to olfactory-triggered cues that vary depending on needs. Several Bactrocera species are attracted explicitly to particular phytochemicals, including methyl eugenol (ME) and cue lure/raspberry ketone (CL/RK). The attraction of Bactrocerans to ME/RK is primarily driven by olfaction. Therefore, the divergent behavioral phenotypes are due to the differences in genes expressed in antennae. High quality transcriptomes were generated with mRNA from dissected antennae, to analyze the differences in olfaction-related genes of three ME-responders B. dorsalis, B. papayae and B. correcta and two RK-responders B. cucurbitae and B. tau. Many distinct quantitative and qualitative differences were identified in their respective chemosensory repertoires. Tissue- and sex-specific expression analyses identified antennae-predominant and sex-biased chemosensory genes. Sequence comparison revealed variations among family members of odorant-binding proteins and odorant-receptors between ME-responders and RK-responders. Differences in composition, expression levels, and sequence of proteins encoded by olfactory-related genes were identified between ME-responders and RK-responders. Some of the differences might contribute to the divergence in response to plant-derived odorants. Taken together, our results provide insights into the evolution of an olfactory system at molecular level in Bactrocera ME- and CL/RK-responding species.


Subject(s)
Biological Evolution , Phytochemicals/genetics , Tephritidae/genetics , Animals , Behavior, Animal , Female , Gene Expression Regulation , Insect Proteins/genetics , Insect Proteins/metabolism , Male , Organ Specificity/genetics , Pheromones/metabolism , Phylogeny , Receptors, Odorant/genetics , Receptors, Odorant/metabolism , Selection, Genetic , Transcriptome/genetics
13.
Phytochemistry ; 171: 112226, 2020 Mar.
Article in English | MEDLINE | ID: mdl-31923721

ABSTRACT

Apricot (Prunus armeniaca L.) is an important fruit crop that is widely planted throughout the world. But drought affects both yield and quality of apricot. In order to study the effects of long-term drought on the molecular and physiological mechanisms of apricot, we used transcriptome sequencing and measured physiological indices. First, 322 million high-quality clean reads were obtained, and 74,892 unigenes were generated for the transcriptome. Among the assembled unigenes, 18,671 simple sequence repeats (SSRs) and 5581 differentially expressed genes (DEGs) were identified. The Kyoto Encyclopedia of Genes and Genomes (KEGG) analysis of the DEGs revealed that starch and sucrose metabolism, plant-pathogen interaction and plant hormone signal transduction pathways are enriched. Additionally, we used quantitative real-time PCR (qRT-PCR) to confirm the RNA-seq results with 11 drought-related DEGs. Second, through the physiological analysis of apricot leaves under constant drought stress, and the results show the internal microstructure of apricot leaves changed to withstand drought stress. At the same time, plants exposed to long-term drought stress showed higher degree of membrane damage, which reduced photosynthesis in the damaged leaves. Our findings enrich the genome resources for apricot and refine our understanding of the molecular and physiological mechanisms of drought response in this fruit crop, providing insights into drought adaptation of the apricot.


Subject(s)
Droughts , Gene Expression Regulation, Plant/genetics , Phytochemicals/genetics , Prunus armeniaca/genetics , Stress, Physiological/genetics , Transcriptome
14.
Biochim Biophys Acta Proteins Proteom ; 1867(11): 140262, 2019 11.
Article in English | MEDLINE | ID: mdl-31404685

ABSTRACT

Plant natural products have been an attracting platform for the isolation of various active drugs and other bioactives. However large-scale extraction of these compounds is affected by the difficulty in mass cultivation of these plants and absence of strategies for successful extraction. Even though, synthesis by chemical method is an alternative method; it is less efficient as their chemical structure is highly complex which involve enantio-selectivity. Thus an alternate bio-system for heterologous production of plant natural products using microbes has emerged. Advent of various omics, synthetic and metabolic engineering strategies revolutionised the field of heterologous plant metabolite production. In this context, various engineering methods taken to synthesise plant natural products are described with an additional focus to fermentation strategies.


Subject(s)
Metabolic Engineering , Microorganisms, Genetically-Modified , Phytochemicals/biosynthesis , Plants , Microorganisms, Genetically-Modified/genetics , Microorganisms, Genetically-Modified/growth & development , Phytochemicals/genetics
15.
Mol Plant ; 12(7): 899-919, 2019 07 01.
Article in English | MEDLINE | ID: mdl-31200079

ABSTRACT

Plants produce a myriad of structurally and functionally diverse metabolites that play many different roles in plant growth and development and in plant response to continually changing environmental conditions as well as abiotic and biotic stresses. This metabolic diversity is, to a large extent, due to chemical modification of the basic skeletons of metabolites. Here, we review the major known plant metabolite modifications and summarize the progress that has been achieved and the challenges we are facing in the field. We focus on discussing both technical and functional aspects in studying the influences that various modifications have on biosynthesis, degradation, transport, and storage of metabolites, as well as their bioactivity and toxicity. Finally, we discuss some emerging insights into the evolution of metabolic pathways and metabolite functionality.


Subject(s)
Metabolic Networks and Pathways , Metabolome , Plant Growth Regulators/metabolism , Plant Proteins , Plants/metabolism , Cheminformatics/methods , Computational Biology/methods , Flavonoids/chemistry , Flavonoids/genetics , Flavonoids/metabolism , Gene Expression Regulation, Plant , Genome, Plant , Metabolic Networks and Pathways/genetics , Metabolic Networks and Pathways/physiology , Metabolome/genetics , Metabolome/physiology , Phytochemicals/genetics , Phytochemicals/metabolism , Plant Growth Regulators/chemistry , Plant Growth Regulators/genetics , Plant Proteins/chemistry , Plant Proteins/genetics , Plant Proteins/metabolism , Secondary Metabolism/genetics , Secondary Metabolism/physiology , Stress, Physiological/genetics , Stress, Physiological/physiology , Terpenes/chemistry , Terpenes/metabolism
16.
Phytochemistry ; 163: 132-146, 2019 Jul.
Article in English | MEDLINE | ID: mdl-31078082

ABSTRACT

The evolution of phytochemical diversity and biosynthetic pathways in plants can be evaluated from a phylogenetic and environmental perspective. Pilocarpus Vahl (Rutaceae), an economically important medicinal plant in the family Rutaceae, has a great diversity of imidazole alkaloids and coumarins. In this study, we used phylogenetic comparative methods to determine whether there is a phylogenetic signal for chemical traits across the genus Pilocarpus; this included ancestral reconstructions of continuous and discrete chemical traits. Bioclimatic variables found to be associated with the distribution of this genus were used to perform OLS regressions between chemical traits and bioclimatic variables. Next, these regression models were evaluated to test whether bioclimatic traits could significantly predict compound concentrations. Our study found that in terms of compound concentration, variation is most significantly associated with adaptive environmental convergence rather than phylogenetic relationships. The best predictive model of chemical traits was the OLS regression that modeled the relationship between coumarin and precipitation in the coldest quarter. However, we also found one chemical trait was dependent on phylogenetic history and bioclimatic factors. These findings emphasize that consideration of both environmental and phylogenetic factors is essential to tease out the intricate processes in the evolution of chemical diversity in plants. These methods can benefit fields such as conservation management, ecology, and evolutionary biology.


Subject(s)
Phytochemicals/chemistry , Rutaceae/chemistry , Phylogeny , Phytochemicals/biosynthesis , Phytochemicals/genetics , Rutaceae/genetics , Rutaceae/metabolism
17.
Gigascience ; 8(3)2019 03 01.
Article in English | MEDLINE | ID: mdl-30715294

ABSTRACT

BACKGROUND: Highbush blueberry (Vaccinium corymbosum) has long been consumed for its unique flavor and composition of health-promoting phytonutrients. However, breeding efforts to improve fruit quality in blueberry have been greatly hampered by the lack of adequate genomic resources and a limited understanding of the underlying genetics encoding key traits. The genome of highbush blueberry has been particularly challenging to assemble due, in large part, to its polyploid nature and genome size. FINDINGS: Here, we present a chromosome-scale and haplotype-phased genome assembly of the cultivar "Draper," which has the highest antioxidant levels among a diversity panel of 71 cultivars and 13 wild Vaccinium species. We leveraged this genome, combined with gene expression and metabolite data measured across fruit development, to identify candidate genes involved in the biosynthesis of important phytonutrients among other metabolites associated with superior fruit quality. Genome-wide analyses revealed that both polyploidy and tandem gene duplications modified various pathways involved in the biosynthesis of key phytonutrients. Furthermore, gene expression analyses hint at the presence of a spatial-temporal specific dominantly expressed subgenome including during fruit development. CONCLUSIONS: These findings and the reference genome will serve as a valuable resource to guide future genome-enabled breeding of important agronomic traits in highbush blueberry.


Subject(s)
Blueberry Plants/genetics , Evolution, Molecular , Genome, Plant , Haplotypes/genetics , Phytochemicals/genetics , Tetraploidy , Antioxidants/metabolism , Biosynthetic Pathways/genetics , Chromosomes, Plant/genetics , Fruit/genetics , Fruit/growth & development , Gene Duplication , Gene Expression Regulation, Plant , Genes, Plant , Molecular Sequence Annotation , Multigene Family , Phytochemicals/chemistry , RNA, Messenger/genetics , RNA, Messenger/metabolism
18.
Biomed Pharmacother ; 109: 1670-1679, 2019 Jan.
Article in English | MEDLINE | ID: mdl-30551421

ABSTRACT

The application of medicinal plants are the most important biotechnological alternative in the treatment of numerous diseases, especially in developing countries, such as Brazil. Among them, we specified some specimens of the genus Cnidoscolus used as phytotherapies, with healing properties, analgesic, anti-inflammatory, antibiotic and diuretic, anticancer, among others. Such effects are possibly associated with the presence of terpenoids, alkaloids, coumarins, flavonoids phenolic compounds, among others. Thus, the objective of this work was to evaluate in the literature the studies on the phytochemical, ethnopharmacological and biotechnological applications of this genus, from 1998 to 2017. Among the sixty-one studies reported in this review, ten species are popularly utilized to pharmacological and/or biotechnological applications. Cnidoscolus aconitifolius and Cnidoscolus chayamansa are the most cited species, which were also supported by either animal or cellular investigations indicating some beneficial pharmacological actions like antioxidant, anti-inflammatory and potential cytotoxic activity. The plant parts of this genus under study are important as sources for the isolation and identification of bioactive molecules with biotechnological applications, among the many diseases treated with this phytotherapy. Given these verdicts, ethnopharmacological approaches are significant systematic tools in the determination of plant species that exhibit medicinal and nutritional purposes. The results presented here should further stimulate the development of validation studies to ensure the safe and effective use of these plant species.


Subject(s)
Ethnobotany/methods , Ethnopharmacology/methods , Euphorbiaceae , Phytochemicals/chemistry , Plants, Medicinal , Animals , Databases, Factual/trends , Ethnobotany/trends , Ethnopharmacology/trends , Euphorbiaceae/genetics , Humans , Phytochemicals/genetics , Phytochemicals/isolation & purification , Phytotherapy/methods , Phytotherapy/trends , Plant Extracts/chemistry , Plant Extracts/genetics , Plant Extracts/isolation & purification , Plants, Medicinal/genetics , Species Specificity
19.
Crit Rev Eukaryot Gene Expr ; 28(3): 223-283, 2018.
Article in English | MEDLINE | ID: mdl-30311569

ABSTRACT

The genus Datura comprises wild shrub plants that belong to the Solanaceae family. Naturally, they possess both medicinal and poisonous properties due to the presence of many biologically active phytochemical constituents. Traditionally, Datura had been used for mystic and religious purposes, as a natural drug to treat asthma, pain, gout, boils, abscesses, and wounds, and as psychoactive infusions and fumitories. Different Datura species exhibit diverse ethnopharmacological activities against different diseases, and many ancient and traditional cultures have used various forms of Datura to treat ailments and to prevent many diseases. In this article, we comprehensively summarize various phytochemical constituents isolated from Datura, their pharmacological properties against different diseases, parts of the plants used as traditional therapeutic agents, regions where they are located, and botanical descriptions of different Datura species. The ethnopharmacological properties of Datura may provide new insights for discovery and development of natural drugs. Further research is needed for the investigation of mechanisms of action and to develop safety profiles of the phytochemical constituents isolated from Datura species.


Subject(s)
Datura/chemistry , Phytochemicals/chemistry , Plant Extracts/chemistry , Datura/genetics , Ethnopharmacology , Humans , Phytochemicals/genetics , Phytotherapy
20.
Molecules ; 23(9)2018 Sep 06.
Article in English | MEDLINE | ID: mdl-30200643

ABSTRACT

The grains and sprouts of colored wheat genotypes (having blue, purple and yellow colored grains) contain specific anthocyanidins, such as pelargonidin and cyanidin derivatives, that produce beneficial health effects. The objective of the presented study is to compare the antioxidant capacity and contents of bioactive phytochemicals in grains and sprouts of wheat genotypes that differ in grain color. The methods α, α-diphenyl-ß-picrylhydrazyl (DPPH) and 2,2'-azino-bis (3-ethylbenzothiazoline-6-sulphonic acid) (ABTS) scavenging activities, together with spectrophotometrical and high-performance thin-layer chromatography (HPTLC) methods, were used to study the presence of total phenolics, flavonoids, anthocyanins and anthocyanidins (pelargonidin, peonidin, cyanidin, delphinidin) content. It was predicted that the sprouts of all colored wheat genotypes would have significantly higher total flavonoids, total phenolics, anthocyanidin levels and antioxidant activity than the grains. The correlation results between antioxidant activity and contents of bioactive phytochemicals in grains and sprouts of colored wheat genotypes have shown a high correlation for cyanidin and pelargonidin, especially in grains, as well as quercetin in sprouts. It was found that total anthocyanin, quercetin and pelargonidin contents were significantly higher in the sprouts of the purple wheat genotypes than in the blue or yellow wheat genotypes. Delphinidin was detected at a higher level in the grains than in the sprouts of the blue wheat genotypes. Peonidin was present at very low quantities in the grains of all colored wheat genotypes. The sprouts of the purple wheat genotypes, among the colored wheat genotypes, had the highest pelargonidin, cyanidin and quercetin contents and, therefore, can be a promising source for functional food use.


Subject(s)
Antioxidants/chemistry , Edible Grain/chemistry , Phytochemicals/chemistry , Triticum/chemistry , Benzothiazoles/chemistry , Biphenyl Compounds/chemistry , Chromatography, High Pressure Liquid , Color , Edible Grain/genetics , Flavonoids/chemistry , Genotype , Phenols/chemistry , Phytochemicals/genetics , Picrates/chemistry , Seedlings/chemistry , Sulfonic Acids/chemistry , Triticum/genetics
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