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1.
BMC Plant Biol ; 24(1): 566, 2024 Jun 17.
Article in English | MEDLINE | ID: mdl-38880875

ABSTRACT

BACKGROUND: Plants can retain atmospheric particulate matter (PM) through their unique foliar microstructures, which has a profound impact on the phyllosphere microbial communities. Yet, the underlying mechanisms linking atmospheric particulate matter (PM) retention by foliar microstructures to variations in the phyllosphere microbial communities remain a mystery. In this study, we conducted a field experiment with ten Ulmus lines. A series of analytical techniques, including scanning electron microscopy, atomic force microscopy, and high-throughput amplicon sequencing, were applied to examine the relationship between foliar surface microstructures, PM retention, and phyllosphere microbial diversity of Ulmus L. RESULTS: We characterized the leaf microstructures across the ten Ulmus lines. Chun exhibited a highly undulated abaxial surface and dense stomatal distribution. Langya and Xingshan possessed dense abaxial trichomes, while Lieye, Zuiweng, and Daguo had sparsely distributed, short abaxial trichomes. Duomai, Qingyun, and Lang were characterized by sparse stomata and flat abaxial surfaces, whereas Jinye had sparsely distributed but extensive stomata. The mean leaf retention values for total suspended particulate (TSP), PM2.5, PM2.5-10, PM10-100, and PM> 100 were 135.76, 6.60, 20.10, 90.98, and 13.08 µg·cm- 2, respectively. Trichomes substantially contributed to PM2.5 retention, while larger undulations enhanced PM2.5-10 retention, as evidenced by positive correlations between PM2.5 and abaxial trichome density and between PM2.5-10 and the adaxial raw microroughness values. Phyllosphere microbial diversity patterns varied among lines, with bacteria dominated by Sediminibacterium and fungi by Mycosphaerella, Alternaria, and Cladosporium. Redundancy analysis confirmed that dense leaf trichomes facilitated the capture of PM2.5-associated fungi, while bacteria were less impacted by PM and struggled to adhere to leaf microstructures. Long and dense trichomes provided ideal microhabitats for retaining PM-borne microbes, as evidenced by positive feedback loops between PM2.5, trichome characteristics, and the relative abundances of microorganisms like Trichoderma and Aspergillus. CONCLUSIONS: Based on our findings, a three-factor network profile was constructed, which provides a foundation for further exploration into how different plants retain PM through foliar microstructures, thereby impacting phyllosphere microbial communities.


Subject(s)
Microbiota , Particulate Matter , Plant Leaves , Ulmus , Plant Leaves/microbiology , Plant Leaves/ultrastructure , Ulmus/microbiology , Microscopy, Electron, Scanning , Bacteria/classification , Bacteria/genetics , Biodiversity
2.
Cells ; 13(11)2024 May 30.
Article in English | MEDLINE | ID: mdl-38891083

ABSTRACT

The differential effects of cellular and ultrastructural characteristics on the optical properties of adaxial and abaxial leaf surfaces in the genus Tradescantia highlight the intricate relationships between cellular arrangement and pigment distribution in the plant cells. We examined hyperspectral and chlorophyll a fluorescence (ChlF) kinetics using spectroradiometers and optical and electron microscopy techniques. The leaves were analysed for their spectral properties and cellular makeup. The biochemical compounds were measured and correlated with the biophysical and ultrastructural features. The main findings showed that the top and bottom leaf surfaces had different amounts and patterns of pigments, especially anthocyanins, flavonoids, total phenolics, chlorophyll-carotenoids, and cell and organelle structures, as revealed by the hyperspectral vegetation index (HVI). These differences were further elucidated by the correlation coefficients, which influence the optical signatures of the leaves. Additionally, ChlF kinetics varied between leaf surfaces, correlating with VIS-NIR-SWIR bands through distinct cellular structures and pigment concentrations in the hypodermis cells. We confirmed that the unique optical properties of each leaf surface arise not only from pigmentation but also from complex cellular arrangements and structural adaptations. Some of the factors that affect how leaves reflect light are the arrangement of chloroplasts, thylakoid membranes, vacuoles, and the relative size of the cells themselves. These findings improve our knowledge of the biophysical and biochemical reasons for leaf optical diversity, and indicate possible implications for photosynthetic efficiency and stress adaptation under different environmental conditions in the mesophyll cells of Tradescantia plants.


Subject(s)
Plant Leaves , Tradescantia , Tradescantia/metabolism , Plant Leaves/metabolism , Plant Leaves/ultrastructure , Fluorescence , Chlorophyll/metabolism , Chlorophyll A/metabolism
3.
Micron ; 183: 103657, 2024 08.
Article in English | MEDLINE | ID: mdl-38735105

ABSTRACT

New data were obtained on specific bionanostructures, cutinsomes, which are involved in the formation of cuticles on the surface of leaf blades and pericarp of Malus domestica Borkh (Malus Mill., Rosaceae)introduced to the mountains at the altitudes of 1200 and 1700 m above sea level. Cutinsomes, which are electron-dense structures of spherical shape, have been identified by transmission electron microscopy. It was demonstrated that plastids can be involved in the synthesis of their constituent nanocomponents. The greatest number of nanoparticles was observed in the granal thylakoid lumen of the chloroplasts in palisade mesophyll cells and pericarp hypodermal cells. The transmembrane transport of cutinsomes into the cell wall cuticle proper by exocytosis has been visualized for the first time. The plasma membrane is directly involved in the excretion of nanostructures from the cell. Nanoparticles of cutinsomes in the form of necklace-like formations line up in a chain near cell walls, merge into larger conglomerates and are loaded into plasmalemma invaginations, and then, in membrane packing, they move into the cuticle, which covers both outer and inner cell walls of external tissues. The original materials obtained by us supplement the ideas about the non-enzymatic synthesis of cuticle components available in the literature and expand the cell compartment geography involved in this process.


Subject(s)
Malus , Microscopy, Electron, Transmission , Plant Leaves , Plant Leaves/ultrastructure , Plant Leaves/metabolism , Malus/ultrastructure , Malus/metabolism , Biological Transport , Cell Wall/ultrastructure , Cell Wall/metabolism , Chloroplasts/ultrastructure , Chloroplasts/metabolism , Cell Membrane/ultrastructure , Cell Membrane/metabolism , Plastids/ultrastructure , Plastids/metabolism
4.
Plant Cell Rep ; 43(5): 135, 2024 May 05.
Article in English | MEDLINE | ID: mdl-38704787

ABSTRACT

KEY MESSAGE: The disruption of the SWL1 gene leads to a significant down regulation of chloroplast and secondary metabolites gene expression in Arabidopsis thaliana. And finally results in a dysfunction of chloroplast and plant growth. Although the development of the chloroplast has been a consistent focus of research, the corresponding regulatory mechanisms remain unidentified. In this study, the CRISPR/Cas9 system was used to mutate the SWL1 gene, resulting in albino cotyledons and variegated true leaf phenotype. Confocal microscopy and western blot of chloroplast protein fractions revealed that SWL1 localized in the chloroplast stroma. Electron microscopy indicated chloroplasts in the cotyledons of swl1 lack well-defined grana and internal membrane structures, and similar structures have been detected in the albino region of variegated true leaves. Transcriptome analysis revealed that down regulation of chloroplast and nuclear gene expression related to chloroplast, including light harvesting complexes, porphyrin, chlorophyll metabolism and carbon metabolism in the swl1 compared to wild-type plant. In addition, proteomic analysis combined with western blot analysis, showed that a significant decrease in chloroplast proteins of swl1. Furthermore, the expression of genes associated with secondary metabolites and growth hormones was also reduced, which may be attributed to SWL1 associated with absorption and fixation of inorganic carbon during chloroplast development. Together, the above findings provide valuable information to elucidate the exact function of SWL1 in chloroplast biogenesis and development.


Subject(s)
Arabidopsis Proteins , Arabidopsis , Chloroplasts , Gene Expression Regulation, Plant , Organelle Biogenesis , Arabidopsis/genetics , Arabidopsis/growth & development , Arabidopsis/metabolism , Arabidopsis Proteins/metabolism , Arabidopsis Proteins/genetics , Chlorophyll/metabolism , Chloroplast Proteins/metabolism , Chloroplast Proteins/genetics , Chloroplasts/metabolism , Chloroplasts/ultrastructure , Cotyledon/genetics , Cotyledon/metabolism , Cotyledon/growth & development , CRISPR-Cas Systems , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/growth & development , Plant Leaves/ultrastructure , Proteomics
5.
Microsc Res Tech ; 87(8): 1889-1903, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38556928

ABSTRACT

This article describes detailed and novel data on the anatomy and histochemistry of leaves, stems, and roots of Camonea umbellata (L.) A.R.Simões & Staples in different environments for the identification of characters with taxonomical value and of ecological importance, with provision of light and scanning electron microscopy images. To analyze the characters, we collected samples of the vegetative organs of three individuals in each of three populations, which were in a grazing area, an urban environment, and a biological reserve. The main diagnostic anatomical markers for the identification of C. umbellata include amphistomatic leaves, tetracytic and brachyparatetracytic stomata, peltate trichomes, long simple trichomes, epidermis with striated cuticle ornamentation, mesophyll with acute borders, presence of druses, secretory channels, angular collenchyma, fibrous pericycle in the stem, intraxylary phloem in the vegetative organs, oil bodies throughout the midrib, petiole, stem and root, and epicuticular waxes of the crust and coiled rodlet types. Since the characters above did not show variation in the environments evaluated, we consider these characters taxonomically useful for the identification of C. umbellata. RESEARCH HIGHLIGHTS: The anatomy of the aerial vegetative organs of Camonnea umbellata retains common Convolvulaceae characters. The sinuosity of the epidermal cell walls and the density of trichomes in the epidermis of the petiole were visually variable characters among the analyzed individuals. Amphistomatic leaves, tetracytic and brachyparatetracytic stomata, peltate trichomes, epidermis with striated cuticle ornamentation, dorsiventral mesophyll with border acute, presence of druses, secretory structures, angular collenchyma, fibrous pericycle in the stem, intraxillary phloem, presence of oil bodies in all organs, and epicuticular waxes of the crust type and coiled rods were considered important anatomical markers for the recognition and correct identification of Camonea umbellata.


Subject(s)
Microscopy, Electron, Scanning , Microscopy , Plant Leaves , Plant Roots , Plant Stems , Trichomes , Plant Leaves/anatomy & histology , Plant Leaves/ultrastructure , Plant Stems/anatomy & histology , Plant Stems/ultrastructure , Trichomes/ultrastructure , Trichomes/anatomy & histology , Plant Roots/anatomy & histology , Plant Roots/ultrastructure , Plant Stomata/ultrastructure , Plant Stomata/anatomy & histology , Plant Epidermis/ultrastructure , Plant Epidermis/anatomy & histology
6.
Ann Bot ; 134(1): 131-150, 2024 Jun 07.
Article in English | MEDLINE | ID: mdl-38551515

ABSTRACT

BACKGROUND AND AIMS: Structural colour is responsible for the remarkable metallic blue colour seen in the leaves of several plants. Species belonging to only ten genera have been investigated to date, revealing four photonic structures responsible for structurally coloured leaves. One of these is the helicoidal cell wall, known to create structural colour in the leaf cells of five taxa. Here we investigate a broad selection of land plants to understand the phylogenetic distribution of this photonic structure in leaves. METHODS: We identified helicoidal structures in the leaf epidermal cells of 19 species using transmission electron microscopy. Pitch measurements of the helicoids were compared with the reflectance spectra of circularly polarized light from the cells to confirm the structure-colour relationship. RESULTS: By incorporating species examined with a polarizing filter, our results increase the number of taxa with photonic helicoidal cell walls to species belonging to at least 35 genera. These include 19 monocot genera, from the orders Asparagales (Orchidaceae) and Poales (Cyperaceae, Eriocaulaceae, Rapateaceae) and 16 fern genera, from the orders Marattiales (Marattiaceae), Schizaeales (Anemiaceae) and Polypodiales (Blechnaceae, Dryopteridaceae, Lomariopsidaceae, Polypodiaceae, Pteridaceae, Tectariaceae). CONCLUSIONS: Our investigation adds considerably to the recorded diversity of plants with structurally coloured leaves. The iterative evolution of photonic helicoidal walls has resulted in a broad phylogenetic distribution, centred on ferns and monocots. We speculate that the primary function of the helicoidal wall is to provide strength and support, so structural colour could have evolved as a potentially beneficial chance function of this structure.


Subject(s)
Biological Evolution , Cell Wall , Phylogeny , Plant Leaves , Plant Leaves/ultrastructure , Plant Leaves/anatomy & histology , Cell Wall/ultrastructure , Microscopy, Electron, Transmission , Color , Plant Epidermis/ultrastructure
7.
Microsc Res Tech ; 87(8): 1849-1861, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38533861

ABSTRACT

The order Sapindales is comprised of nine families and in Brazil it is represented by six, including Rutaceae Juss., which constitutes the largest group of this order. A variety of species of Zanthoxylum L. are distributed throughout the country, and among them is the species Zanthoxylum kleinii (R.S. Cowan) P.G. Waterman, which is found in the states of Brazil. This study aimed to characterize the morphoanatomy of the leaf, petiole, rachis, and stem of the species Z. kleinii. Histochemical tests were performed, and the sections were visualized under optical and scanning electron microscopy. The analysis showed that the morphoanatomical characteristics of the species are: hypoestomatic leaflets; stomata classified as anomocytic, tetracytic, and anisocytic; dorsiventral mesophyll; cavities that produce a secretion of lipid nature, present in the leaflet, rachis, and petiole; colleters distributed in the leaf; presence of simple non-glandular trichomes in all structures; and prismatic crystals in the petiole. Histochemical tests indicated the presence of phenolic and lipophilic compounds, mucilage, and lignin. With the result of this research, it was possible to identify the nature of the compounds secreted by the secretory structures of the leaves; in addition, the morphoanatomical characterization of Z. kleinii can provide relevant data for future studies for other organs of the species not yet described. Furthermore, contributing concomitantly with data for the genus, in this way, supporting to differentiate them. RESEARCH HIGHLIGHTS: Ultrastructural features observed by microscopic techniques. Calcium oxalate crystals present in the rachis. Microchemical tests confirmed the presence of colleters in the leaflet.


Subject(s)
Microscopy, Electron, Scanning , Plant Leaves , Zanthoxylum , Plant Leaves/anatomy & histology , Plant Leaves/ultrastructure , Plant Leaves/chemistry , Zanthoxylum/chemistry , Zanthoxylum/anatomy & histology , Zanthoxylum/ultrastructure , Brazil , Plant Stems/anatomy & histology , Plant Stems/ultrastructure , Plant Stems/chemistry , Microscopy , Trichomes/ultrastructure , Trichomes/anatomy & histology
8.
Microsc Res Tech ; 87(7): 1640-1646, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38450874

ABSTRACT

The classification and identification of Aster glehnii F. Schmidt are determined from its foliar epidermal anatomical features. Scanning electronic microscopy has been used to determine the foliar epidermal anatomical characteristics of the species in detail. This study compared the qualitative and quantitative characteristics of the leaf epidermis of A. glehnii for taxonomic identification to be used as a reference for future studies on the species. A. glehnii has smooth, thin cuticles, depressed anomocytic stomata dispersed randomly throughout the leaf surface, polygonal epidermal cells with straight to slightly curved anticlinal walls, and no trichomes. There are obvious veins containing thick-walled bundle sheath cells. The stomatal density is between 100 and 150 stomata per millimeter. The vein density ranges from five to 10 veins per millimeter, and the epidermal cells are 10 to 20 µm long and 5 to 10 µm in width. Understanding the connections between the different A. glehnii species and categorizing and identifying them depend heavily on these foliar epidermal structural features. Taxonomy and conservation are closely intertwined because the former serves as the basis for comprehending and safeguarding biodiversity. RESEARCH HIGHLIGHTS: Optical microscopy of the A. glehnii leaf epidermis for taxonomic identification SEM was used to identify and authenticate endemic species Microscopic identification of endemic species can assist in the conservation.


Subject(s)
Microscopy, Electron, Scanning , Plant Epidermis , Plant Leaves , Plant Stomata , Plant Leaves/anatomy & histology , Plant Leaves/ultrastructure , Plant Leaves/cytology , Plant Epidermis/ultrastructure , Plant Epidermis/anatomy & histology , Plant Epidermis/cytology , Plant Stomata/anatomy & histology , Plant Stomata/ultrastructure , Asteraceae/anatomy & histology , Asteraceae/cytology , Asteraceae/classification , Asteraceae/ultrastructure
9.
Ann Bot ; 133(4): 621-642, 2024 Apr 23.
Article in English | MEDLINE | ID: mdl-38366151

ABSTRACT

BACKGROUND AND AIMS: Extrafloral nectaries are nectar-secreting structures present on vegetative parts of plants which provide indirect defences against herbivore attack. Extrafloral nectaries in Clerodendrum chinense are patelliform-shaped specialized trichomatous structures. However, a complete understanding of patelliform extrafloral nectaries in general, and of C. chinense in particular, has not yet been established to provide fundamental insight into the cellular physiological machinery involved in nectar biosynthesis and secretory processes. METHODS: We studied temporal changes in the morphological, anatomical and ultrastructural features in the architectures of extrafloral nectaries. We also compared metabolite profiles of extrafloral nectar, nectary tissue, non-nectary tissue and phloem sap. Further, both in situ histolocalization and normal in vitro activities of enzymes related to sugar metabolism were examined. KEY RESULTS: Four distinct tissue regions in the nectar gland were revealed from histochemical characterization, among which the middle nectariferous tissue was found to be the metabolically active region, while the intermediate layer was found to be lipid-rich. Ultrastructural study showed the presence of a large number of mitochondria along with starch-bearing chloroplasts in the nectariferous region. However, starch depletion was noted with progressive maturation of nectaries. Metabolite analysis revealed compositional differences among nectar, phloem sap, nectary and non-nectary tissue. Invertase activity was higher in secretory stages and localized in nectariferous tissue and adjacent region. CONCLUSIONS: Our study suggests extrafloral nectar secretion in C. chinense to be both eccrine and merocrine in nature. A distinct intermediate lipid-rich layer that separates the epidermis from nectary parenchyma was revealed, which possibly acts as a barrier to water flow in nectar. This study also revealed a distinction between nectar and phloem sap, and starch could act as a nectar precursor, as evidenced from enzymatic and ultrastructural studies. Thus, our findings on changing architecture of extrafloral nectaries with temporal secretion revealed a cell physiological process involved in nectar biosynthesis and secretion.


Subject(s)
Clerodendrum , Plant Leaves , Plant Nectar , Plant Nectar/metabolism , Clerodendrum/metabolism , Clerodendrum/ultrastructure , Plant Leaves/ultrastructure , Plant Leaves/metabolism , Plant Leaves/anatomy & histology
10.
Protoplasma ; 261(4): 655-669, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38217740

ABSTRACT

Quinoa is a facultative halophyte with excellent tolerance to salinity. In this study, the epidermal bladder cell complex (EBCc) of quinoa leaves was studied to determine their cellular characteristics and involvement in salt tolerance. We used light microscopy, confocal RAMAN microscopy, confocal fluorescence microscopy, transmission electron microscopy, and environmental scanning electron microscopy complemented by energy dispersive X-ray analysis. Ionic content was quantified with flame atomic absorption spectroscopy and with flame emission photometry. Results show that: (i) the number of EBCcs remains constant but their density and area vary with leaf age; (ii) stalk cells store lipids and exhibit thick walls, bladder cells present carotenes in small vesicles, oxalate crystals in vacuoles and lignin in their walls and both stalk and bladder cells have cuticles that differ in wax and cutin content; (iii) chloroplasts containing starch can be found on both stalk and bladder cells, and the latter also presents grana; (iv) plasmodesmata are observed between the stalk cell and the bladder cell, and between the epidermal cell and the stalk cell, and ectodesmata-like structures are observed on the bladder cell. Under high salinity conditions, (v) there is a clear tendency to accumulate greater amounts of K+ with respect to Na+ in the bladder cell; (vi) stalk cells accumulate similar amounts of K+ and Na+; (vii) Na+ accumulates mainly in the medullary parenchyma of the stem. These results add knowledge about the structure, content, and role of EBCc under salt stress, and surprisingly present the parenchyma of the stem as the main area of Na+ accumulation.


Subject(s)
Chenopodium quinoa , Plant Epidermis , Chenopodium quinoa/metabolism , Chenopodium quinoa/chemistry , Plant Epidermis/ultrastructure , Plant Epidermis/cytology , Plant Epidermis/metabolism , Salt Stress , Cations , Plant Leaves/ultrastructure , Plant Leaves/metabolism , Salinity
11.
Microsc Res Tech ; 85(7): 2428-2437, 2022 Jul.
Article in English | MEDLINE | ID: mdl-35253946

ABSTRACT

Artemisia annua, Artemisia argyi, Artemisia absinthium, Artemisia leucophylla and Artemisia lavandulaefolia are five herbal species of Artemisia usually misidentified, adulterated or substituted in commerce. Using light microscopy, scanning electron microscopy and microscopic quantitative analysis, the transverse sections, morphological, powder and quantitative microscopic features of glandular trichome density and area were observed for correct authentication. The results indicated that microscopic characteristics such as the distribution of fiber bundles in the vascular bundle of the main vein, the shape of xylem, the density and type of non-glandular trichomes, the morphology of T-shaped non-glandular trichomes, the type of calcium oxalate crystals, and the number and size of glandular trichomes can be used to authenticate the five Artemisia crude herbs. Differences in the morphology and density of glandular and non-glandular trichomes are key features for the identification of five Artemisia species. Therefore, our study provides a more comprehensive microscopic identification diagram and additional microscopic evidence for the five Artemisia species. HIGHLIGHTS: This study provides a more comprehensive microscopic identification diagram and statistical information on the glandular trichome density and area for accurate authentication of five Artemisia herbs using light microscopy, scanning electron microscopy and microscopic quantitative analysis.


Subject(s)
Artemisia annua , Plant Leaves , Microscopy, Electron, Scanning , Plant Leaves/ultrastructure , Trichomes/ultrastructure
12.
BMC Microbiol ; 22(1): 18, 2022 01 08.
Article in English | MEDLINE | ID: mdl-34996363

ABSTRACT

BACKGROUND: Fe-deficiency chlorosis (FDC) of Asian pear plants is widespread, but little is known about the association between the microbial communities in the rhizosphere soil and leaf chlorosis. The leaf mineral concentration, leaf subcellular structure, soil physiochemical properties, and bacterial species community and distribution had been analysed to gain insights into the FDC in Asian pear plant. RESULTS: The total Fe in leaves with Fe-deficiency was positively correlated with total K, Mg, S, Cu, Zn, Mo and Cl contents, but no differences of available Fe (AFe) were detected between the rhizosphere soil of chlorotic and normal plants. Degraded ribosomes and degraded thylakloid stacks in chloroplast were observed in chlorotic leaves. The annotated microbiome indicated that there were 5 kingdoms, 52 phyla, 94 classes, 206 orders, 404 families, 1,161 genera, and 3,043 species in the rhizosphere soil of chlorotic plants; it was one phylum less and one order, 11 families, 59 genera, and 313 species more than in that of normal plant. Bacterial community and distribution patterns in the rhizosphere soil of chlorotic plants were distinct from those of normal plants and the relative abundance and microbiome diversity were more stable in the rhizosphere soils of normal than in chlorotic plants. Three (Nitrospira defluvii, Gemmatirosa kalamazoonesis, and Sulfuricella denitrificans) of the top five species (N. defluvii, G. kalamazoonesis, S. denitrificans, Candidatus Nitrosoarchaeum koreensis, and Candidatus Koribacter versatilis). were the identical and aerobic in both rhizosphere soils, but their relative abundance decreased by 48, 37, and 22%, respectively, and two of them (G. aurantiaca and Ca. S. usitatus) were substituted by an ammonia-oxidizing soil archaeon, Ca. N. koreensis and a nitrite and nitrate reduction related species, Ca. K. versatilis in that of chlorotic plants, which indicated the adverse soil aeration in the rhizosphere soil of chlorotic plants. A water-impermeable tables was found to reduce the soil aeration, inhibit root growth, and cause some absorption root death from infection by Fusarium solani. CONCLUSIONS: It was waterlogging or/and poor drainage of the soil may inhibit Fe uptake not the amounts of AFe in the rhizosphere soil of chlorotic plants that caused FDC in this study.


Subject(s)
Microbiota , Plant Necrosis and Chlorosis/microbiology , Pyrus/microbiology , Rhizosphere , Bacteria/classification , Bacteria/genetics , Bacteria/isolation & purification , Bacteria/metabolism , Fungi/classification , Fungi/genetics , Fungi/isolation & purification , Fungi/metabolism , Gene Ontology , Iron/analysis , Iron/metabolism , Metagenomics , Minerals/analysis , Minerals/metabolism , Plant Leaves/metabolism , Plant Leaves/microbiology , Plant Leaves/ultrastructure , Plant Roots/growth & development , Plant Roots/microbiology , Pyrus/metabolism , Pyrus/ultrastructure , Soil/chemistry , Soil Microbiology , Water/analysis
13.
Microsc Res Tech ; 85(3): 1194-1198, 2022 Mar.
Article in English | MEDLINE | ID: mdl-34843150

ABSTRACT

The anatomical variations of two plants from the Nyctaginaceae family, Bougainvillea spectabilis and Bougainvillea glabra, were studied using light and scanning electron microscopy methods in this work. Bougainvillea is a dicotyledonous with defensive traits that can withstand extreme (hot and dry) settings; according to the findings, crystal inclusions in cells, woody spines, and an abnormal development pattern are all features that help them survive against predators and are unique to this species. The Bougainvillea plant's leaves are arranged in simple pattern, alternate to each other along stem having an undulate leaves edge and an oval form. The xylem and phloem, palisade, parenchyma midrib, spongy mesophyll, raphide crystal bundles, and trichomes were all visible when bracts and leaves were transversally sectioned and dyed with toluidine blue O (TBO). The presence of crystals was confirmed by a detailed examination of the transverse leaves by using bright-field and cross-polarizing microscopy. Dissecting microscopic examination showed that all the leaves revealed leaves venation pattern that had midvein, lateral veins areoles, and trichomes. Although trichomes have been identified on both sides, a closer look at a cleaned leaf dyed with TBO showed multicellular abundant trichomes on adaxial surface. Stomata complexes were typically found on the abaxial surface of the leaf according to epidermal peels. Present studies also showed that on adaxial side, stomata were lesser in number or were absent and also showed that the morphologies of the pavement cells on the adaxial and abaxial sides of the leaf differed.


Subject(s)
Nyctaginaceae , Plant Stomata , Microscopy, Electron, Scanning , Pakistan , Plant Leaves/ultrastructure , Plant Stomata/ultrastructure , Trichomes/ultrastructure
14.
Int J Mol Sci ; 22(17)2021 Aug 24.
Article in English | MEDLINE | ID: mdl-34502042

ABSTRACT

The membrane domain of eukaryotic HMG-CoA reductase (HMGR) has the conserved capacity to induce endoplasmic reticulum (ER) proliferation and membrane association into Organized Smooth Endoplasmic Reticulum (OSER) structures. These formations develop in response to overexpression of particular proteins, but also occur naturally in cells of the three eukaryotic kingdoms. Here, we characterize OSER structures induced by the membrane domain of Arabidopsis HMGR (1S domain). Immunochemical confocal and electron microscopy studies demonstrate that the 1S:GFP chimera co-localizes with high levels of endogenous HMGR in several ER compartments, such as the ER network, the nuclear envelope, the outer and internal membranes of HMGR vesicles and the OSER structures, which we name ER-HMGR domains. After high-pressure freezing, ER-HMGR domains show typical crystalloid, whorled and lamellar ultrastructural patterns, but with wide heterogeneous luminal spaces, indicating that the native OSER is looser and more flexible than previously reported. The formation of ER-HMGR domains is reversible. OSER structures grow by incorporation of ER membranes on their periphery and progressive compaction to the inside. The ER-HMGR domains are highly dynamic in their formation versus their disassembly, their variable spherical-ovoid shape, their fluctuating borders and their rapid intracellular movement, indicating that they are not mere ER membrane aggregates, but active components of the eukaryotic cell.


Subject(s)
Arabidopsis Proteins/metabolism , Endoplasmic Reticulum/ultrastructure , Hydroxymethylglutaryl-CoA-Reductases, NADP-dependent/metabolism , Arabidopsis , Arabidopsis Proteins/chemistry , Endoplasmic Reticulum/metabolism , Hydroxymethylglutaryl-CoA-Reductases, NADP-dependent/chemistry , Plant Leaves/metabolism , Plant Leaves/ultrastructure , Protein Domains
15.
Protoplasma ; 258(6): 1167-1169, 2021 Nov.
Article in English | MEDLINE | ID: mdl-34590192
16.
PLoS One ; 16(9): e0257008, 2021.
Article in English | MEDLINE | ID: mdl-34478465

ABSTRACT

In this study, the feasibility of classifying soybean frogeye leaf spot (FLS) is investigated. Leaf images and hyperspectral reflectance data of healthy and FLS diseased soybean leaves were acquired. First, image processing was used to classify FLS to create a reference for subsequent analysis of hyperspectral data. Then, dimensionality reduction methods of hyperspectral data were used to obtain the relevant information pertaining to FLS. Three single methods, namely spectral index (SI), principal component analysis (PCA), and competitive adaptive reweighted sampling (CARS), along with a PCA and SI combined method, were included. PCA was used to select the effective principal components (PCs), and evaluate SIs. Characteristic wavelengths (CWs) were selected using CARS. Finally, the full wavelengths, CWs, effective PCs, SIs, and significant SIs were divided into 14 datasets (DS1-DS14) and used as inputs to build the classification models. Models' performances were evaluated based on the classification accuracy for both the overall and individual classes. Our results suggest that the FLS comprised of five classes based on the proportion of total leaf surface covered with FLS. In the PCA and SI combination model, 5 PCs and 20 SIs with higher weight coefficient of each PC were extracted. For hyperspectral data, 20 CWs and 26 effective PCs were also selected. Out of the 14 datasets, the model input variables provided by five datasets (DS2, DS3, DS4, DS10, and DS11) were more superior than those of full wavelengths (DS1) both in support vector machine (SVM) and least squares support vector machine (LS-SVM) classifiers. The models developed using these five datasets achieved overall accuracies ranging from 91.8% to 94.5% in SVM, and 94.5% to 97.3% in LS-SVM. In addition, they improved the classification accuracies by 0.9% to 3.6% (SVM) and 0.9% to 3.7% (LS-SVM).


Subject(s)
Glycine max/ultrastructure , Image Processing, Computer-Assisted/methods , Mycoses/microbiology , Plant Diseases/microbiology , Plant Leaves , Spectroscopy, Near-Infrared/methods , Cercospora , Plant Leaves/microbiology , Plant Leaves/ultrastructure , Glycine max/microbiology , Support Vector Machine
17.
BMC Plant Biol ; 21(1): 387, 2021 Aug 20.
Article in English | MEDLINE | ID: mdl-34416853

ABSTRACT

BACKGROUND: The plant body in duckweed species has undergone reduction and simplification from the ancient Spirodela species towards more derived Wolffia species. Among the five duckweed genera, Wolffia members are rootless and represent the smallest and most reduced species. A better understanding of Wolffia frond architecture is necessary to fully explore duckweed evolution. RESULTS: We conducted a comprehensive study of the morphology and anatomy of Wolffia globosa, the only Wolffia species in China. We first used X-ray microtomography imaging to reveal the three-dimensional and internal structure of the W. globosa frond. This showed that new fronds rapidly budded from the hollow reproductive pocket of the mother fronds and that several generations at various developmental stages could coexist in a single W. globosa frond. Using light microscopy, we observed that the meristem area of the W. globosa frond was located at the base of the reproductive pocket and composed of undifferentiated cells that continued to produce new buds. A single epidermal layer surrounded the W. globosa frond, and the mesophyll cells varied from small and dense palisade-like parenchyma cells to large, vacuolated cells from the ventral to the dorsal part. Furthermore, W. globosa fronds contained all the same organelles as other angiosperms; the most prominent organelles were chloroplasts with abundant starch grains. CONCLUSIONS: Our study revealed that the reproductive strategy of W. globosa plants enables the rapid accumulation of biomass and the wide distribution of this species in various habitats. The reduced body plan and size of Wolffia are consistent with our observation that relatively few cell types are present in these plants. We also propose that W. globosa plants are not only suitable for the study of structural reduction in higher plants, but also an ideal system to explore fundamental developmental processes of higher plants that cannot be addressed using other model plants.


Subject(s)
Lilianae/anatomy & histology , Lilianae/growth & development , Lilianae/genetics , Plant Leaves/anatomy & histology , Plant Leaves/growth & development , Plant Leaves/genetics , Biological Evolution , China , Lilianae/ultrastructure , Plant Leaves/ultrastructure
18.
BMC Plant Biol ; 21(1): 368, 2021 Aug 12.
Article in English | MEDLINE | ID: mdl-34384391

ABSTRACT

BACKGROUND: Melatonin is considered a potential plant growth regulator to enhance the growth of plants and increase tolerance to various abiotic stresses. Nevertheless, melatonin's role in mediating stress response in different plant species and growth cycles still needs to be explored. This study was conducted to understand the impact of different melatonin concentrations (0, 50, 100, and 150 µM) applied as a soil drench to maize seedling under drought stress conditions. A decreased irrigation approach based on watering was exposed to maize seedling after drought stress was applied at 40-45% of field capacity. RESULTS: The results showed that drought stress negatively affected the growth behavior of maize seedlings, such as reduced biomass accumulation, decreased photosynthetic pigments, and enhanced the malondialdehyde and reactive oxygen species (ROS). However, melatonin application enhanced plant growth; alleviated ROS-induced oxidative damages by increasing the photosynthetic pigments, antioxidant enzyme activities, relative water content, and osmo-protectants of maize seedlings. CONCLUSIONS: Melatonin treatment also enhanced the stomatal traits, such as stomatal length, width, area, and the number of pores under drought stress conditions. Our data suggested that 100 µM melatonin application as soil drenching could provide a valuable foundation for improving plant tolerance to drought stress conditions.


Subject(s)
Melatonin/pharmacology , Plant Growth Regulators/pharmacology , Zea mays/drug effects , Zea mays/growth & development , Antioxidants/metabolism , Biomass , Chlorophyll/metabolism , Droughts , Oxidative Stress , Photosynthesis/drug effects , Plant Leaves/drug effects , Plant Leaves/ultrastructure , Plant Proteins/metabolism , Plant Stomata/drug effects , Plant Stomata/ultrastructure , Proline/metabolism , Reactive Oxygen Species , Seedlings/drug effects , Seedlings/growth & development , Sugars/metabolism , Zea mays/enzymology , Zea mays/physiology
19.
Plant Mol Biol ; 106(6): 521-531, 2021 Aug.
Article in English | MEDLINE | ID: mdl-34224063

ABSTRACT

KEY MESSAGE: We characterize a functional lincRNA, XH123 in cotton seedling in defense of cold stress. The silencing of XH123 leads to increased sensitivity to cold stress and the decay of chloroplast. Cotton, which originated from the arid mid-American region, is one of the most important cash crops worldwide. Cultivated cotton is now widely spread throughout high-altitude regions such as those in the far northwest of Asia. In such areas, spring temperatures below 12 ℃ impose cold stress on cotton seedlings, with concomitant threat of lost yield and productivity. It is documented that cold stress can induce differential expression of long noncoding RNAs (lncRNAs) in cotton; however, it is not yet clear if these cold-responsive lncRNAs are actively involved with tolerance of cold stress at the molecular level. Here, we select ten long intergenic non-coding RNAs as candidate genes and use virus-induced gene silencing and additional cold treatments to examine their roles in the response to cold stress during the cotton seedling stage. One such gene, XH123, was revealed to be involved in tolerance of cold stress. Specifically, XH123-silenced plants demonstrated sensitivity to cold stress, exhibiting chloroplast damage and increased endogenous levels of reactive oxygen species. The transcriptome profile of XH123-silenced seedlings was similar to that of cold-stressed seedlings having the known cold stress gene PIF3 silenced. These results imply that the lincRNA XH123 is actively involved with cold stress regulation in cotton during the seedling stage.


Subject(s)
Cold-Shock Response/genetics , Gene Expression Profiling/methods , Gene Expression Regulation, Plant , Gossypium/genetics , RNA, Long Noncoding/genetics , RNA, Plant/genetics , Adaptation, Physiological/genetics , Chloroplasts/genetics , Chloroplasts/metabolism , Chloroplasts/ultrastructure , Cold Temperature , Gene Silencing , Gossypium/growth & development , Microscopy, Electron, Transmission , Plant Leaves/genetics , Plant Leaves/metabolism , Plant Leaves/ultrastructure , RNA-Seq/methods , Seedlings/genetics , Seedlings/growth & development
20.
Int J Mol Sci ; 22(11)2021 May 26.
Article in English | MEDLINE | ID: mdl-34073516

ABSTRACT

Transitory starch granules result from complex carbon turnover and display specific situations during starch synthesis and degradation. The fundamental mechanisms that specify starch granule characteristics, such as granule size, morphology, and the number per chloroplast, are largely unknown. However, transitory starch is found in the various cells of the leaves of Arabidopsis thaliana, but comparative analyses are lacking. Here, we adopted a fast method of laser confocal scanning microscopy to analyze the starch granules in a series of Arabidopsis mutants with altered starch metabolism. This allowed us to separately analyze the starch particles in the mesophyll and in guard cells. In all mutants, the guard cells were always found to contain more but smaller plastidial starch granules than mesophyll cells. The morphological properties of the starch granules, however, were indiscernible or identical in both types of leaf cells.


Subject(s)
Arabidopsis/metabolism , Carbohydrate Metabolism , Mesophyll Cells/metabolism , Plant Leaves/metabolism , Starch/metabolism , Arabidopsis/ultrastructure , Mesophyll Cells/ultrastructure , Plant Leaves/ultrastructure
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