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1.
Int J Biol Macromol ; 269(Pt 2): 131918, 2024 Jun.
Article En | MEDLINE | ID: mdl-38697418

Polygalacturonases (PGs) can modulate chemistry and mechanical properties of the plant cell wall through the degradation of pectins, one of its major constituents. PGs are largely used in food, beverage, textile, and paper industries to increase processes' performances. To improve the use of PGs, knowledge of their biochemical, structural and functional features is of prime importance. Our study aims at characterizing SmoPG1, a polygalacturonase from Selaginella moellendorffii, that belongs to the lycophytes. Transcription data showed that SmoPG1 was mainly expressed in S. moellendorffii shoots while phylogenetic analyses suggested that SmoPG1 is an exo-PG, which was confirmed by the biochemical characterization following its expression in heterologous system. Indeed, LC-MS/MS oligoprofiling using various pectic substrates identified galacturonic acid (GalA) as the main hydrolysis product. We found that SmoPG1 was most active on polygalacturonic acid (PGA) at pH 5, and that its activity could be modulated by different cations (Ca2+, Cu2+, Fe2+, Mg2+, Mn2+, Na2+, Zn2+). In addition, SmoPG1 was inhibited by green tea catechins, including (-)-epigallocatechin-3-gallate (EGCG). Docking analyses and MD simulations showed in detail amino acids responsible for the SmoPG1-EGCG interaction. Considering its expression yield and activity, SmoPG1 appears as a prime candidate for the industrial production of GalA.


Pectins , Polygalacturonase , Selaginellaceae , Polygalacturonase/metabolism , Polygalacturonase/chemistry , Polygalacturonase/genetics , Selaginellaceae/chemistry , Selaginellaceae/genetics , Selaginellaceae/enzymology , Pectins/metabolism , Pectins/chemistry , Phylogeny , Substrate Specificity , Molecular Docking Simulation , Amino Acid Sequence , Hydrogen-Ion Concentration , Hydrolysis , Hexuronic Acids
2.
Int J Biol Macromol ; 269(Pt 2): 132054, 2024 Jun.
Article En | MEDLINE | ID: mdl-38704063

In this study, we analyzed the pectin structure within the pulp of cassava. Cassava pectin, derived from cassava pulp treatment at 120 °C for 90 min, was separated into four fractions (CP-P, CP-SD1, CP-SD2F, and CP-SD2R) based on variations in water solubility, electrical properties, and molecular weights. Sugar composition analysis demonstrated an abundance of homogalacturonan (HG) in CP-P and CP-SD2F, rhamnogalacturonan I (RG-I) in CP-SD2R, and neutral sugars in CP-SD1. Because RG-I possesses a complex structure, we analyzed CP-SD2R using various pectinolytic enzymes. Galactose was the major sugar in CP-SD2R accounting for 49 %, of which 65 % originated from arabinogalactan I, 9 % from galactose and galactooligosaccharides, 5 % from arabinogalactan II, and 11 % from galactoarabinan. Seventy-four percent of arabinose in CP-SD2R was present as galactoarabinan. The methylation (DM) and acetylation (DAc) degrees of cassava pectin were 11 and 15 %, respectively. The HG and RG-I regions exhibited DAc values of 5 and 44 %, respectively, signifying the high DAc of RG-I compared to HG. Information derived from the structural analysis of cassava pectin will enable efficient degradation of pectin and cellulose, leading to the use of cassava pulp as a raw material for biorefineries.


Manihot , Pectins , Manihot/chemistry , Pectins/chemistry , Chemical Fractionation , Molecular Weight , Polygalacturonase/chemistry , Polygalacturonase/metabolism , Methylation , Solubility
3.
Int J Biol Macromol ; 267(Pt 2): 131565, 2024 May.
Article En | MEDLINE | ID: mdl-38614184

Endopolygalacturonases are crucial pectinases known for their efficient and sustainable pectin depolymerization activities. The present study identified a novel gene encoding endopolygalacturonase from an acidic mine tailing metagenome. The putative gene showed a maximum identity of 67.55 % with an uncharacterized peptide sequence from Flavobacterium fluvii. The gene was cloned and expressed in a heterologous host, E. coli. Biochemical characterization of the novel endopolygalacturonase enzyme variant (EPHM) showed maximum activity at 60 °C and at 5.0 pH, while retaining 50 % activity under the temperature and pH range of 20 °C to 70 °C for 6 h, and 3.0 to 10.0 for 3 h, respectively. The enzyme exhibited tolerance to different metal ions. EPHM was characterized for the depolymerization of methylated pectin into pectic oligosaccharides. Further, its utility was established for fruit juice clarification, as endorsed by high transmittance, significant viscosity reduction, and release of reducing sugars in the treated fruit juice samples.


Fruit and Vegetable Juices , Pectins , Polygalacturonase , Pectins/metabolism , Pectins/chemistry , Polygalacturonase/metabolism , Polygalacturonase/chemistry , Polygalacturonase/genetics , Fruit and Vegetable Juices/analysis , Hydrogen-Ion Concentration , Temperature , Cloning, Molecular , Polymerization , Oligosaccharides/chemistry
4.
Food Funct ; 15(9): 4887-4893, 2024 May 07.
Article En | MEDLINE | ID: mdl-38597504

Inhibition of galectin-3-mediated interactions by modified citrus pectin (MCP) could affect several rate-limiting steps in cancer metastasis, but the ability of MCP to antagonize galectin-8 function remains unknown. We hypothesized that MCP could bind to galectin-8 in addition to galectin-3. In this study, a combination of gradual ethanol precipitation and DEAE-Sepharose Fast Flow chromatography was used to isolate several fractions from MCP. The ability of these fractions to antagonize galectin-8 function was studied as well as the primary structure and initial structure-function relationship of the major active component MCP-30-3. The results showed that MCP-30-3 (168 kDa) was composed of Gal (13.8%), GalA (63.1%), GlcA (13.0%), and Glc (10.1%). MCP-30-3 could specifically bind to galectin-8, with an MIC value of 0.04 mg mL-1. After MCP-30-3 was hydrolyzed by ß-galactosidase or pectinase, its binding activity was significantly reduced. These results provide new insights into the interaction between MCP structure and galectin function, as well as the potential utility in the development of functional foods.


Galectins , Pectins , Pectins/chemistry , Pectins/pharmacology , Galectins/metabolism , Galectins/chemistry , Humans , Citrus/chemistry , Galectin 3/metabolism , Blood Proteins/chemistry , Blood Proteins/metabolism , Protein Binding , Polygalacturonase/chemistry , Polygalacturonase/metabolism
5.
Int J Biol Macromol ; 267(Pt 1): 131469, 2024 May.
Article En | MEDLINE | ID: mdl-38604432

Pectic polysaccharide is a bioactive ingredient in Chrysanthemum morifolium Ramat. 'Hangbaiju' (CMH), but the high proportion of HG domain limited its use as a prebiotic. In this study, hot water, cellulase-assisted, medium-temperature alkali, and deep eutectic solvent extraction strategies were firstly used to extract pectin from CMH (CMHP). CMHP obtained by cellulase-assisted extraction had high purity and strong ability to promote the proliferation of Bacteroides and mixed probiotics. However, 4 extraction strategies led to general high proportion of HG domain in CMHPs. To further enhance the dissolution and prebiotic potential of CMHP, pectinase was used alone and combined with cellulase. The key factor for the optimal extraction was enzymolysis by cellulase and pectinase in a mass ratio of 3:1 at 1 % (w/w) dosage. The optimal CMHP had high yield (15.15 %), high content of total sugar, and Bacteroides proliferative activity superior to inulin, which was probably due to the cooperation of complex enzyme on the destruction of cell wall and pectin structural modification for raised RG-I domain (80.30 %) with relatively high degree of branching and moderate HG domain. This study provided a green strategy for extraction of RG-I enriched prebiotic pectin from plants.


Bacteroides , Chrysanthemum , Pectins , Pectins/chemistry , Chrysanthemum/chemistry , Cell Proliferation/drug effects , Cellulase/chemistry , Cellulase/metabolism , Solubility , Polygalacturonase/chemistry , Polygalacturonase/metabolism
6.
Int J Biol Macromol ; 266(Pt 2): 131309, 2024 May.
Article En | MEDLINE | ID: mdl-38580019

Enzymatic degradation of plant biomass requires the coordinated action of various enzymes. In this study, the production of reducing sugars from pectic substrates and sugar beet pulp (SBP) was investigated and compared using commercial enzyme preparations, including M2, pectinase (E1), Viscozyme L (V-L) and L-40. V-L, a cellulolytic enzyme mix produced by Aspergillus sp. was further evaluated as the most robust enzyme cocktail with the strongest SBP degradation ability in terms of the release of monosaccharides, methanol, and acetate from SBP. Mass-spectrometry-based proteomics analysis of V-L revealed 156 individual proteins. Of these, 101 proteins were annotated as containing a carbohydrate-active enzyme module. Notably, of the 50 most abundant proteins, ca. 44 % were predicted to be involved in pectin degradation. To reveal the role of individual putative key enzymes in pectic substrate decomposition, two abundant galacturonases (PglA and PglB), were heterologously expressed in Pichia pastoris and further characterized. PglA and PglB demonstrated maximum activity at 57 °C and 68 °C, respectively, and exhibited endo-type cleavage patterns towards polygalacturonic acid. Further studies along this line may lead to a better understanding of efficient SBP degradation and may help to design improved artificial enzyme mixtures with lower complexity for future application in biotechnology.


Pectins , Proteomics , Pectins/metabolism , Proteomics/methods , Substrate Specificity , Polygalacturonase/metabolism , Polygalacturonase/chemistry , Beta vulgaris/chemistry , Beta vulgaris/metabolism , Aspergillus/enzymology
7.
Molecules ; 29(5)2024 Feb 28.
Article En | MEDLINE | ID: mdl-38474547

Enzymatic hydrolysis using pectinase is critical for producing high-yield and quality sea buckthorn juice. This study determined the optimal temperature, time, and enzyme dosage combinations to guide manufacturers. A temperature of 60 °C, hydrolysis time of 3 h, and 0.3% enzyme dosage gave 64.1% juice yield-25% higher than without enzymes. Furthermore, monitoring physicochemical properties reveals enzyme impacts on composition. Higher dosages increase soluble solids up to 15% and soluble fiber content by 35% through cell wall breakdown. However, excessive amounts over 0.3% decrease yields. Pectin concentration also declines dose-dependently, falling by 91% at 0.4%, improving juice stability but needing modulation to retain viscosity. Electrochemical fingerprinting successfully differentiates process conditions, offering a rapid quality control tool. Its potential for commercial inline use during enzymatic treatment requires exploration. Overall, connecting optimized parameters to measured effects provides actionable insights for manufacturers to boost yields, determine enzyme impacts on nutrition/functionality, and introduce novel process analytical technology. Further investigations of health properties using these conditions could expand sea buckthorn juice functionality.


Hippophae , Polygalacturonase , Polygalacturonase/metabolism , Hippophae/metabolism , Temperature , Fruit/chemistry , Hydrolysis
8.
ACS Appl Mater Interfaces ; 16(12): 15143-15155, 2024 Mar 27.
Article En | MEDLINE | ID: mdl-38481099

Realizing controllable input of botanical pesticides is conducive to improving pesticide utilization, reducing pesticide residues, and avoiding environmental pollution but is extremely challenging. Herein, we constructed a smart pesticide-controlled release platform (namely, SCRP) for enhanced treatment of tobacco black shank based on encapsulating honokiol (HON) with mesoporous hollow structured silica nanospheres covered with pectin and chitosan oligosaccharide (COS). The SCRP has a loading capacity of 12.64% for HON and could effectively protect HON from photolysis. Owing to the pH- and pectinase-sensitive property of the pectin, the SCRP could smartly release HON in response to a low pH or a rich pectinase environment in the black shank-affected area. Consequently, the SCRP effectively inhibits the infection of P. nicotianae on tobacco with a controlled rate for tobacco black shank of up to 87.50%, which is mainly due to the SCRP's capability in accumulating ROS, changing cell membrane permeability, and affecting energy metabolism. In addition, SCRP is biocompatible, and the COS layer enables SCRP to show a significant growth-promoting effect on tobacco. These results indicate that the development of a stimuli-responsive controlled pesticide release system for plant disease control is of great potential and value for practical agriculture production.


Pesticides , Pesticides/pharmacology , Delayed-Action Preparations/pharmacology , Delayed-Action Preparations/chemistry , Polygalacturonase , Agriculture , Pectins
9.
Food Chem ; 446: 138903, 2024 Jul 15.
Article En | MEDLINE | ID: mdl-38452507

Cryoprotective effect and potential mechanism of soluble soybean polysaccharides (SSPS) and enzymatic hydrolysates on surimi was investigated. After hydrolysis, the molecular weight of SSPS significantly decreased, and the hydrolysates prepared by endo-polygalacturonase (EPG-SSPS) was the lowest (154 kDa). Infrared spectrum analysis revealed that enzymatic hydrolysis didn't alter the functional groups of SSPS, but it did augment the exposure to hydroxyl groups. Surimi containing 5 % EPG-SSPS had the lowest freezable water after 20 days of frozen storage. Furthermore, the 5 % EPG-SSPS group manifested the highest metrics in total sulfhydryl (8.0 × 10-5 mol/g), active sulfhydryl content (6.7 × 10-5 mol/g), Ca2+-ATPase activity, and exhibited the lowest level in carbonyl content, surface hydrophobicity (153 µg). Notably, the 5 % EPG-SSPS maintained the stability of protein structure. Conclusively, SSPS enzymatic hydrolysate using endo-polygalacturonase imparted superior cryoprotective effect on the myofibrillar protein of surimi, and the mechanism might be a decrease in molecular weight and exposure of hydroxyl groups.


Cryoprotective Agents , Glycine max , Animals , Cryoprotective Agents/chemistry , Polygalacturonase , Polysaccharides/pharmacology , Polysaccharides/chemistry , Freezing , Fishes , Protein Hydrolysates/chemistry
10.
Int J Biol Macromol ; 264(Pt 1): 130476, 2024 Apr.
Article En | MEDLINE | ID: mdl-38428761

A whole-cell biocatalyst was developed by genetically engineering pectinase PG5 onto the cell surface of Pichia pastoris using Gcw12 as the anchoring protein. Whole-cell PG5 eliminated the need for enzyme extraction and purification, while also exhibiting enhanced thermal stability, pH stability, and resistance to proteases in vitro compared to free PG5. Magnetic resonance mass spectrometry analysis revealed that whole-cell PG5 efficiently degraded citrus pectin, resulting in the production of a mixture of pectin oligosaccharides. The primary components of the mixture were trigalacturonic acid, followed by digalacturonic acid and tetragalacturonic acid. Supplementation of citrus pectin with whole-cell PG5 resulted in a more pronounced protective effect compared to free PG5 in alleviating colitis symptoms and promoting the integrity of the colonic epithelial barrier in a mouse model of dextran sulfate sodium-induced colitis. Hence, this study demonstrates the potential of utilizing whole-cell pectinase as an effective biocatalyst to promote intestinal homeostasis in vivo.


Colitis , Polygalacturonase , Saccharomycetales , Animals , Mice , Polygalacturonase/genetics , Polygalacturonase/metabolism , Intestinal Barrier Function , Colitis/chemically induced , Colitis/drug therapy , Colitis/metabolism , Pectins/pharmacology , Pectins/metabolism , Dietary Supplements
11.
Enzyme Microb Technol ; 177: 110424, 2024 Jun.
Article En | MEDLINE | ID: mdl-38479075

In this work, the polygalacturonase (TL-PG1) from the thermophilic fungus Thermomyces lanuginosus was heterologously produced for the first time in the yeast Komagataella phaffii. The TL-PG1 was successfully expressed under the control of the AOX1 promoter and sequentially purified by His-tag affinity. The purified recombinant pectinase exhibited an activity of 462.6 U/mL toward polygalacturonic acid under optimal conditions (pH 6 and 55 ˚C) with a 2.83 mg/mL and 0.063 µmol/minute for Km and Vmax, respectively. When used as supplementation for biomass hydrolysis, TL-PG1 demonstrated synergy with the enzymatic cocktail Ctec3 to depolymerize orange citrus pulp, releasing 1.43 mg/mL of reducing sugar. In addition, TL-PG1 exhibited efficiency in fabric bioscouring, showing potential usage in the textile industry. Applying a protein dosage of 7 mg/mL, the time for the fabric to absorb water was 19.77 seconds (ten times faster than the control). Adding the surfactant Triton to the treatment allowed the reduction of the enzyme dosage by 50% and the water absorption time to 6.38 seconds. Altogether, this work describes a new versatile polygalacturonase from T. lanuginosus with the potential to be employed in the hydrolysis of lignocellulosic biomass and bioscouring.


Fungal Proteins , Polygalacturonase , Saccharomycetales , Biomass , Eurotiales/enzymology , Eurotiales/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Hydrolysis , Kinetics , Polygalacturonase/metabolism , Polygalacturonase/genetics , Recombinant Proteins/metabolism , Recombinant Proteins/genetics , Saccharomycetales/genetics , Saccharomycetales/enzymology , Saccharomycetales/metabolism , Textile Industry , Textiles
12.
Int J Biol Macromol ; 266(Pt 2): 130968, 2024 May.
Article En | MEDLINE | ID: mdl-38521324

The investigation aims to determine the effect of enzymatic and alkali treatments on Sambucus ebulus L. stem fiber. For this purpose, Sambucus ebulus L. stem fibers were treated with alkali, cellulase, and pectinase enzymes. An image processing technique was developed and implemented to calculate the average thicknesses of Sambucus ebulus L. fibers. The thickness of alkali, cellulase and pectinase enzyme treated fibers was determined as 478.62 µm, 808.28 µm and 478.20 µm, respectively. Scanning electron microscopy analysis illustrated that enzymatic and alkali treatments lead to the breakage of fiber structure. Furthermore, enzymatic and alkali treatments induce variations in elemental ingredients. All treatments increased the crystallinity index of Sambucus ebulus L. fiber from 72 % (raw fiber) to 83 % (alkali treated), 75.2 % (cellulase enzyme treated) and 86.3 % (pectinase enzyme treated) due to the hydrolysis of hemicellulose. Fourier transform infrared analysis indicated that there are no significant differences in functional groups. Thermogravimetric analysis shows that enzymatic and alkali treatments improve final degradation temperature of the fiber. Mechanical behaviors of cellulase enzyme-treated fiber decrease compared to raw fiber, while pectinase enzyme and alkali treatment cause to improve mechanical properties. Tensile strength of samples was determined as 76.4 MPa (cellulase enzyme treated fiber), 210 MPa (pectinase enzyme treated fiber) and 240 MPa (alkali treated fiber). Young's modules of cellulase enzyme, pectinase enzyme and alkali treated fibers were predicted as 5.5 GPa, 13.1 GPa and 16.6 GPa. Elongation at break of samples was calculated as 5.5 % (cellulase enzyme treated fiber), 6.5 % (pectinase enzyme treated fiber) and 6 % (alkali treated fiber). The results suggest that enzymatic and alkali treatments can modify the functional and structural attributes of Sambucus ebulus L. fiber.


Alkalies , Cellulase , Polygalacturonase , Sambucus , Cellulase/metabolism , Cellulase/chemistry , Polygalacturonase/chemistry , Polygalacturonase/metabolism , Sambucus/chemistry , Alkalies/chemistry , Hydrolysis , Chemical Phenomena , Polysaccharides/chemistry
13.
Int J Biol Macromol ; 263(Pt 1): 130268, 2024 Apr.
Article En | MEDLINE | ID: mdl-38387627

Global market of food enzymes is held by pectinases, mostly sourced from filamentous fungi via submerged fermentation. Given the one-time use nature of enzymes to clarify juices and wines, there is a crucial need to explore alternatives for enzyme immobilization, enabling their reuse in food applications. In this research, an isolated fungal strain (Penicillium crustosum OR889307) was evaluated as a new potential pectinase producer in submerged fermentation. Additionally, the enzyme was immobilized in magnetic core-shell nanostructures for juice clarification. Findings revealed that Penicillium crustosum exhibited enzymatic activities higher than other Penicillium species, and pectinase production was enhanced with lemon peel as a cosubstrate in submerged fermentation. The enzyme production (548.93 U/mL) was optimized by response surface methodology, determining the optimal conditions at 35 °C and pH 6.0. Subsequently, the enzyme was covalently immobilized on synthesized magnetic core-shell nanoparticles. The immobilized enzyme exhibited superior stability at higher temperatures (50 °C) and acidic conditions (pH 4.5). Finally, the immobilized pectinases decreased 30 % the orange juice turbidity and maintained 84 % of the enzymatic activity after five consecutive cycles. In conclusion, Penicillium crustosum is a proven pectinase producer and these enzymes immobilized on functionalized nanoparticles improve the stability and reusability of pectinase for juice clarification.


Nanoparticles , Penicillium , Polygalacturonase/chemistry , Enzymes, Immobilized/chemistry , Penicillium/metabolism , Temperature , Magnetic Phenomena , Hydrogen-Ion Concentration , Enzyme Stability
14.
Science ; 383(6684): 732-739, 2024 Feb 16.
Article En | MEDLINE | ID: mdl-38359129

Polygalacturonase-inhibiting proteins (PGIPs) interact with pathogen-derived polygalacturonases to inhibit their virulence-associated plant cell wall-degrading activity but stimulate immunity-inducing oligogalacturonide production. Here we show that interaction between Phaseolus vulgaris PGIP2 (PvPGIP2) and Fusarium phyllophilum polygalacturonase (FpPG) enhances substrate binding, resulting in inhibition of the enzyme activity of FpPG. This interaction promotes FpPG-catalyzed production of long-chain immunoactive oligogalacturonides, while diminishing immunosuppressive short oligogalacturonides. PvPGIP2 binding creates a substrate binding site on PvPGIP2-FpPG, forming a new polygalacturonase with boosted substrate binding activity and altered substrate preference. Structure-based engineering converts a putative PGIP that initially lacks FpPG-binding activity into an effective FpPG-interacting protein. These findings unveil a mechanism for plants to transform pathogen virulence activity into a defense trigger and provide proof of principle for engineering PGIPs with broader specificity.


Fusarium , Phaseolus , Plant Immunity , Plant Proteins , Polygalacturonase , Virulence Factors , Immunity, Innate , Plant Proteins/metabolism , Polygalacturonase/metabolism , Virulence Factors/metabolism , Fusarium/immunology , Fusarium/pathogenicity , Phaseolus/immunology , Phaseolus/microbiology
15.
Food Res Int ; 180: 114055, 2024 Mar.
Article En | MEDLINE | ID: mdl-38395572

The retention of flavan-3-ols and other phenolic compounds during apple juice production at pilot plant scale (200 kg, cv. Boskoop) was investigated. An oxygen-excluding spiral filter press and a conventional decanter were used with and without pectinase mash treatment. Phenolic compounds were comprehensively identified and quantitated by RP-UHPLC and HILIC, both coupled to DAD-FLD and DAD-ESI(-)-QTOF-HR-MS/MS. These techniques combined with using a NIST cocoa flavan-3-ol standard allowed for the first time an individual quantification of flavan-3-ol fractions (DP 1-7) in apple juices. Spiral filter-pressed juices were exposed to less oxidation and exhibited four times higher total phenolic compound levels than decanter-made juices (1016 vs. 262 mg/L). Apple juices derived from pectinase-treated mashes had lower total phenolic compound levels than their non-treated counterparts. However, those made by spiral filter press still retained significantly higher concentrations (780 vs. 104 mg/L). Flavan-3-ols were especially well retained by spiral filter press processing, reaching unprecedentedly high concentrations of up to 713 mg/L. A 280 mL serving of non-treated spiral filter-pressed juice would therefore suffice to provide the daily intake of 200 mg flavan-3-ols, equaling the dose of cocoa flavan-3-ols associated with an authorized European health claim for healthy blood flow.


Cacao , Malus , Tandem Mass Spectrometry , Polygalacturonase , Flavonoids , Phenols
16.
Sci Rep ; 14(1): 5037, 2024 02 29.
Article En | MEDLINE | ID: mdl-38424450

The filamentous Thermoascus aurantiacus fungus characterized by its thermophilic nature, is recognized as an exceptional producer of various enzymes with biotechnological applications. This study aimed to explore biotechnological applications using polygalacturonase (PG) derived from the Thermoascus aurantiacus PI3S3 strain. PG production was achieved through submerged fermentation and subsequent purification via ion-exchange chromatography and gel filtration methods. The crude extract exhibited a diverse spectrum of enzymatic activities including amylase, cellulase, invertase, pectinase, and xylanase. Notably, it demonstrated the ability to hydrolyze sugarcane bagasse biomass, corn residue, and animal feed. The purified PG had a molecular mass of 36 kDa, with optimal activity observed at pH 4.5 and 70 °C. The activation energy (Ea) was calculated as 0.513 kJ mol-1, highlighting activation in the presence of Ca2+. Additionally, it displayed apparent Km, Vmax, and Kcat values of at 0.19 mg mL-1, 273.10 U mL-1, and 168.52 s-1, respectively, for hydrolyzing polygalacturonic acid. This multifunctional PG exhibited activities such as denim biopolishing, apple juice clarification, and demonstrated both endo- and exo-polygalacturonase activities. Furthermore, it displayed versatility by hydrolyzing polygalacturonic acid, carboxymethylcellulose, and xylan. The T. aurantiacus PI3S3 multifunctional polygalacturonase showed heightened activity under acidic pH, elevated temperatures, and in the presence of calcium. Its multifunctional nature distinguished it from other PGs, significantly expanding its potential for diverse biotechnological applications.


Saccharum , Thermoascus , Polygalacturonase/metabolism , Thermoascus/metabolism , Cellulose , Multifunctional Enzymes , Saccharum/metabolism , Hydrogen-Ion Concentration , Enzyme Stability , Temperature
17.
Food Chem ; 441: 138298, 2024 May 30.
Article En | MEDLINE | ID: mdl-38199103

Food quality is greatly impacted by traditional heat methods for polygalacturonase (PG) inactivation; therefore, it's imperative to develop a novel infrared (IR) inactivation approach and identify its mechanism. Utilizing molecular dynamics (MD) simulation, this study verified the PG's activity, structure, active sites, and substrate channel under the single thermal and non-thermal effects of IR. PG activity was significantly reduced by IR, and structure was unfolded by increasing random coils (65.62 %) and decreasing ß-sheets (29.11 %). MD data indicated that the relative locations of PG's active sites were altered by both IR effects, and the enzyme-substrate channel was shortened (10.53 % at 18 µm and 15.79 % at 80 °C). The thermal effect of IR on the inactivation of PG was significantly more pronounced than its non-thermal effect. This study unveiled the mechanism by which the infrared disrupted PG's activity, active sites, and substrate channels; thus, it expanded the infrared technique's efficacy in enzyme control.


Molecular Dynamics Simulation , Polygalacturonase , Polygalacturonase/metabolism
18.
Bioresour Technol ; 394: 130283, 2024 Feb.
Article En | MEDLINE | ID: mdl-38163489

The current research discusses a multidimensional bioprocess development, that includes bioprospecting, strain improvement, media optimisation, and applications of the extracted enzyme. A potent alkalophilic polygalacturonase (PG) producing bacterial strain was isolated and identified as a novel Glutamicibacter sp. Furthermore, strain improvement by UV and chemical mutagenesis not only improved the enzyme (PGmut) production but also enhanced its temperature optima from 37 °C to 50 °C. The use of solid substrate fermentation, followed bystatistical optimisation through PB and RSM, substantially increasedPGmut production. A 10-fold increase in enzyme production (632 U/gm) was observed when sugarcane bagasse with a pH of 10.5, 66.8 % moisture, and an inoculum size of 10.15 % was used. The model's accuracy was supported by p-value (p < 0.0001), and an R2 of 0.9940. A pilot-scale experiment, demonstrated ≈ 62,229 U/100 gm PG activity. Additionally, the enzyme's efficacy in demucilization of coffee beans, and bioscouring of jute fibre indicated that it is a valuable biocatalyst.


Polygalacturonase , Saccharum , Polygalacturonase/metabolism , Cellulose , Bioprospecting , Saccharum/metabolism , Fermentation
19.
J Basic Microbiol ; 64(2): e2300529, 2024 Feb.
Article En | MEDLINE | ID: mdl-38066405

Global production of sugarcane bagasse (SB) by sugar industries exceeds more than 100 tons per annum. SB is rich in lignin and polysaccharide and hence can serve as a low-cost energy and carbon source for the growth of industrially important microorganism. However, various other applications of SB have also been investigated. In this study, SB was used as an adsorbent to remove an azo dye, malachite green. Subsequently, the dye-adsorbed SB was fermented by Trametes pubescens MB 89 for the production of laccase enzyme. The fungal pretreated SB was further utilized as a substrate for the simultaneous production of multiple plant cell wall degrading enzymes including, cellulase, xylanase, pectinase, and amylase by thermophilic bacterial strains. Results showed that 0.1% SB removed 97.04% malachite green at 30°C after 30 min from a solution containing 66 ppm of the dye. Fermentation of the dye-adsorbed SB by T. pubescens MB 89 yielded 667.203 IU mL-1 laccase. Moreover, Brevibacillus borstelensis UE10 produced 38.41 and 18.6 IU mL-1 ß-glucosidase and pectinase, respectively, by using fungal-pretreated SB. Cultivation of B. borstelensis UE27 in the medium containing the same substrate yielded 32.14 IU mL-1 of endoglucanase and 27.23 IU mL-1 of ß-glucosidase. Likewise, Neobacillus sedimentimangrovi UE25 could produce a mix of ß-glucosidase (37.24 IU mL-1 ), xylanase (18.65 IU mL-1 ) and endoglucanase (26.65 IU mL-1 ). Hence, this study led to the development of a method through which dye-containing textile effluent can be treated by SB along with the production of industrially important enzymes.


Cellulase , Rosaniline Dyes , Saccharum , Cellulose/metabolism , Cellulase/metabolism , Polygalacturonase , Saccharum/metabolism , Laccase , Trametes/metabolism , Fermentation , beta-Glucosidase/metabolism
20.
Bioprocess Biosyst Eng ; 47(2): 289-297, 2024 Feb.
Article En | MEDLINE | ID: mdl-38086976

In this study, the potential of ultrafiltered xylano-pectinolytic enzymatic bleaching approach was investigated, for manufacturing wheat straw-based paper. The enzymatic step was found to be most effective, with xylanase-pectinase dose of 4-1.7 IU/g pulp and time period of 180 min. The absorption spectra of the pulp free filtrate samples obtained after treatment of the pulp with ultrafiltered enzymes showed the removal of more impurities, in comparison to the treatment with crude enzymes. Microscopic analysis also showed the removal of lignin impurities in enzymatically bleached pulp samples. This bleaching approach using enzymes resulted in 27% reduction in ClO2 dose. Ultrafiltered enzymes treated pulp samples also showed improved quality-related parameters, and Gurley porosity, burst index, breaking length, double fold, tear index, and viscosity increased by 19.05, 13.70, 8.18, 29.27, 4.41, and 13.27%, respectively. The lignin content, TDS, TSS, BOD and COD values also decreased in the effluent samples obtained after enzymatic bleaching plus 73% chemical bleaching dose. The BOD and COD values of the effluent samples improved by 23.01 and 23.66%, respectively. Thus, indicating the potential of ultrafiltered xylano-pectinolytic enzymes in reducing pollution during bleaching of wheat straw. This is the first study, mentioning the efficacy of ultrafiltered enzymes in the bleaching of wheat straw-based paper with better optical-strength-related properties and effluent characteristics.


Lignin , Paper , Triticum/chemistry , Endo-1,4-beta Xylanases/chemistry , Polygalacturonase
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