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1.
Biomed Pharmacother ; 179: 117365, 2024 Oct.
Article in English | MEDLINE | ID: mdl-39217837

ABSTRACT

Mangosteen (Garcinia mangostana) is well-known for its nutritional value and health benefits. Breast cancer is the most common cancer and the leading cause of cancer-related mortality among females worldwide. Here we show that the prenylated xanthones, α-mangostin, γ-mangostin, 9-hydroxycalabaxanthone (9-HCX), and garcinone E from the mangosteen pericarp exhibit cytotoxicity against a panel of human cancer cell lines including lung adenocarcinoma (A549), cervical carcinoma (HeLa), prostatic carcinoma (DU 145), pancreatic carcinoma (MIA PaCa-2), hepatocellular carcinoma (Hep G2), bladder urothelial cancer (5637), as well as the triple-negative breast cancer cells MDA-MB-231. In line with its higher predicted bioactivity score compared to other prenylated xanthones, 9-HCX induced the strongest antiproliferative and proapoptotic effects in MDA-MB-231 breast cancer xenografts in vivo. In different in vitro models, we demonstrate that prenylated xanthones from G. mangostana target mitochondria in cancer cells by inhibition of the mitochondrial respiratory chain complex II (α-mangostin, γ-mangostin, and garcinone E) and complex III (9-HCX) as shown in isolated mitochondria. Accordingly, oxidative mitochondrial respiration (OXPHOS) was inhibited, mitochondrial proton leak increased, and adenosine triphosphate (ATP) synthesis decreased as analyzed by Seahorse assay in MDA-MB-231 cells. Hence, the prenylated xanthones increased mitochondrial superoxide levels, induced mitochondrial membrane permeabilization, and initiated caspase 3/7-mediated apoptosis in MDA-MB-231 triple-negative breast cancer cells. Thus, prenylated xanthones from Garcinia mangostana exhibit anticancer activity based on interference with the mitochondrial respiration.


Subject(s)
Garcinia mangostana , Mitochondria , Xanthones , Xanthones/pharmacology , Xanthones/isolation & purification , Humans , Garcinia mangostana/chemistry , Mitochondria/drug effects , Mitochondria/metabolism , Cell Line, Tumor , Animals , Prenylation , Female , Mice , Apoptosis/drug effects , Cell Respiration/drug effects , Antineoplastic Agents, Phytogenic/pharmacology , Antineoplastic Agents, Phytogenic/isolation & purification , Mice, Nude , Xenograft Model Antitumor Assays , Cell Proliferation/drug effects , Neoplasms/drug therapy , Neoplasms/pathology , Neoplasms/metabolism
2.
Biochemistry ; 63(18): 2335-2343, 2024 Sep 17.
Article in English | MEDLINE | ID: mdl-39231435

ABSTRACT

Prenylated-FMN (prFMN) is the cofactor used by the UbiD-like family of decarboxylases that catalyzes the decarboxylation of various aromatic and unsaturated carboxylic acids. prFMN is synthesized from reduced FMN and dimethylallyl phosphate (DMAP) by a specialized prenyl transferase, UbiX. UbiX catalyzes the sequential formation of two bonds, the first between N5 of the flavin and C1 of DMAP, and the second between C6 of the flavin and C3 of DMAP. We have examined the reaction of UbiX with both FMN and riboflavin. Although UbiX converts FMN to prFMN, we show that significant amounts of the N5-dimethylallyl-FMN intermediate are released from the enzyme during catalysis. With riboflavin as the substrate, UbiX catalyzes only a partial reaction, resulting in only N5-dimethylallyl-riboflavin being formed. Purification of the N5-dimethylallyl-FMN adduct allowed its structure to be verified by 1H NMR spectroscopy and its reactivity to be investigated. Surprisingly, whereas reduced prFMN oxidizes in seconds to form the stable prFMN semiquinone radical when exposed to air, N5-dimethylallyl-FMN oxidizes much more slowly over several hours; in this case, oxidation is accompanied by spontaneous hydrolysis to regenerate FMN. These studies highlight the important contribution that cyclization of the prenyl-derived ring of prFMN makes to the cofactor's biological activity.


Subject(s)
Dimethylallyltranstransferase , Flavin Mononucleotide , Prenylation , Flavin Mononucleotide/metabolism , Flavin Mononucleotide/chemistry , Dimethylallyltranstransferase/metabolism , Dimethylallyltranstransferase/chemistry , Escherichia coli Proteins/metabolism , Escherichia coli Proteins/chemistry , Riboflavin/biosynthesis , Riboflavin/analogs & derivatives , Riboflavin/metabolism , Riboflavin/chemistry , Organophosphorus Compounds/metabolism , Organophosphorus Compounds/chemistry , Catalysis , Allyl Compounds/metabolism , Allyl Compounds/chemistry , Escherichia coli/metabolism , Escherichia coli/genetics , Carboxy-Lyases , Hemiterpenes
3.
J Agric Food Chem ; 72(37): 20396-20409, 2024 Sep 18.
Article in English | MEDLINE | ID: mdl-39240776

ABSTRACT

Apical-out enteroids mimic the in vivo environment well due to their accessible apical surface and mucus layer, making them an ideal model for studying the impact of (bioactive) food compounds. Generated human ileal apical-out enteroids showed a fucose-containing mucus layer surrounding the apical brush border on their exposure side, indicating their physiological relevance. Effects on the mucosal epithelium of antibacterial prenylated phenolics (glabridin, licochalcone A, and glycycoumarin) from licorice roots were investigated for cytotoxicity, cell viability, barrier integrity, and biotransformation. At concentrations up to 500 µg mL-1, licochalcone A and glycycoumarin did not significantly affect apical-out enteroids, with cytotoxicities of -6 ± 2 and -2 ± 2% and cell viabilities of 77 ± 22 and 77 ± 13%, respectively (p > 0.05). Conversely, 500 µg mL-1 glabridin induced significant cytotoxicity (31 ± 25%, p < 0.05) and reduced cell viability (21 ± 14%, p < 0.01). Apical-out enteroids revealed differential sensitivities to prenylated phenolics not observed in apical-in enteroids and Caco-2 cells. Both enteroid models showed phase II biotransformation but differed in the extent of glucuronide conversion. The apical mucus layer of apical-out enteroids likely contributed to these differential interactions, potentially due to differences in electrostatic repulsion. This study underscores the relevance of 3D apical-out enteroid models and highlights the promise of prenylated phenolics for antimicrobial applications.


Subject(s)
Biotransformation , Glycyrrhiza , Phenols , Plant Extracts , Plant Roots , Humans , Glycyrrhiza/chemistry , Glycyrrhiza/metabolism , Phenols/metabolism , Phenols/chemistry , Plant Roots/chemistry , Plant Roots/metabolism , Plant Extracts/metabolism , Plant Extracts/chemistry , Cell Survival/drug effects , Intestinal Mucosa/metabolism , Prenylation , Mucus/metabolism , Mucus/chemistry , Caco-2 Cells , Isoflavones
4.
Appl Microbiol Biotechnol ; 108(1): 473, 2024 Sep 25.
Article in English | MEDLINE | ID: mdl-39320549

ABSTRACT

Prenylated indole alkaloids, which are mainly produced by genera Aspergillus and Penicillium, are a class of structurally intriguing specialized metabolites with remarkable biomedical interests. In this study, chemically guided isolation of the Nicotiana tabacum-derived endophytic fungus Aspergillus japonicus TE-739D yielded eight structurally diverse prenylated indole alkaloids, including an undescribed compound, namely aspertaichamide B (ATB, 1), together with seven previously discovered derivatives (compounds 2 - 8). Their chemical structures as well as the stereochemical features were determined by integrated spectroscopic analyses, including HRESIMS, NMR, NMR calculations with DP4 + probability analysis, and a comparison of the experimental ECD data with computed DFT-based quantum chemical calculations. In vitro cytotoxic effects against the gastric cancer MFC cells revealed that the new compound ATB demonstrated considerable activity. Further studies found that ATB suppressed the viability, colony formation, and migration ability of MFC cells, and induced MFC cells apoptosis in a concentration-dependent way. Moreover, ATB stimulated ROS production in MFC cells and inhibited the tumor growth in the MFC-sourced subcutaneous tumor model while not significantly reducing the weight of mice. The pharmacological results suggested that the newly discovered ATB may be a promising anti-tumor lead compound. KEY POINTS: • Eight structurally diverse prenylated indole alkaloids including a new aspertaichamide B (ATB) were isolated from the fungus Aspergillus japonicus TE-739D. • The structure of ATB was elucidated by HRESIMS, NMR, NMR calculations with DP4 + probability analysis, and ECD calculations. • ATB inhibited cell proliferation, promoted apoptosis, and increased ROS production in gastric cancer cells, and exhibited inhibitory effects on tumor growth in vivo.


Subject(s)
Antineoplastic Agents , Aspergillus , Indole Alkaloids , Prenylation , Aspergillus/chemistry , Animals , Indole Alkaloids/pharmacology , Indole Alkaloids/chemistry , Indole Alkaloids/isolation & purification , Cell Line, Tumor , Antineoplastic Agents/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/isolation & purification , Mice , Apoptosis/drug effects , Humans , Cell Survival/drug effects , Reactive Oxygen Species/metabolism , Cell Proliferation/drug effects
5.
J Org Chem ; 89(17): 12639-12650, 2024 Sep 06.
Article in English | MEDLINE | ID: mdl-39180143

ABSTRACT

Total syntheses of the title prenylated indole alkaloids together with seven others are reported. Biogenetic considerations have been employed in devising the reaction sequences leading to these targets with, in the opening stages, electrochemically-derived indole-3-carboxaldehyde 15 being subject to an aldol-type condensation reaction involving diketopiperazine derivative 19. This led, after prototopic shifts, intramolecular Diels-Alder cycloaddition and hydrolysis/deprotection steps, to the racemic forms of the bicyclo[2.2.2]diazaoctane-containing natural product stephacidin A (2) and its C6 epimer 3. Epoxidation of the last compound afforded, following rearrangement of the primary oxidation products, a mixture of (±)-taichunamide A [(±)-4] and (±)-versicolamide B [(±)-7]. Related protocols allowed for the conversion of (±)-stephacidin A [(±)-2] into (±)-notoamide B [(±)-5]. Analogous aldol condensation, nucleophilic reduction, and epoxidation steps led to the formation of (-)-notoamide E and its conversion into notoamide C as well as the indole fragmentation product amoenamide E. A late-stage chlorination reaction applied to (±)-stephacidin A provided access to the spirocyclic oxindole (±)-notoamide N [(±)-6].


Subject(s)
Indole Alkaloids , Indole Alkaloids/chemistry , Indole Alkaloids/chemical synthesis , Molecular Structure , Prenylation , Stereoisomerism , Biomimetics , Cycloaddition Reaction , Indoles/chemistry , Indoles/chemical synthesis
6.
Sci Rep ; 14(1): 18587, 2024 08 10.
Article in English | MEDLINE | ID: mdl-39127763

ABSTRACT

Phenol soluble modulins (PSMs) are small amphipathic peptides involved in a series of biological functions governing staphylococcal pathogenesis, primarily by facilitating the formation of an extracellular fibril structure with amyloid-like properties. This fibrillar architecture stabilizes the staphylococcal biofilm making it resilient to antibiotic treatment. Our study aims to abrogate the amyloid fibrillation of PSM α1 with novel insights on the amyloid modulatory potential of a prenylated chalcone, Isobavachalcone (IBC). A combination of biophysical and computational assays to address the amyloid modulatory effect of IBC has been undertaken to arrive at a model for the inhibition of PSM α1 fibrillation. ThT kinetics studies indicated that IBC must be stably interacting with the amyloidogenic core of PSM α1 monomers or it may be inhibiting the pre-fibrillar aggregates populated at the early stages of amyloid transformation kinetics. This heteromolecular association further inhibits the amyloid transformation corroborated by a ∼ 94% and ∼ 91% reduction in the ThT maxima, even at sub-stoichiometric concentrations. Transmission electron microscopy (TEM) of end-stage aggregates (∼ 55 h) depict mature, inter-twined, laterally stacked amyloid fibrils in untreated PSM α1 samples while this fibrillar load is remarkably reduced in the presence of IBC. The inhibitory effect of IBC on the ß-sheet transitions of PSM α1 were also validated using far-UV CD spectra. Molecular dynamics simulation studies with PSM aggregates (PSM-A) have also suggested that IBC disrupts the hydrogen bonding interactions and corroborates the inhibition of alpha to beta transitions of PSM-A. Collectively, our data proposes a novel structural motif for the rational discovery of non-toxic therapeutic agents targeting the functional amyloids which have slowly emerged as potent factors, consolidating the antibiotic resistant staphylococcal biofilm assembly.


Subject(s)
Amyloid , Chalcones , Staphylococcus aureus , Staphylococcus aureus/drug effects , Staphylococcus aureus/metabolism , Chalcones/pharmacology , Chalcones/chemistry , Chalcones/metabolism , Amyloid/metabolism , Amyloid/chemistry , Molecular Dynamics Simulation , Kinetics , Prenylation , Bacterial Proteins/metabolism , Bacterial Proteins/chemistry , Biofilms/drug effects , Bacterial Toxins
7.
J Nat Med ; 78(4): 970-977, 2024 Sep.
Article in English | MEDLINE | ID: mdl-39126611

ABSTRACT

Phytochemical study on the flowers of Hypericum formosanum Maxim. (Hypericaceae) led to the isolation of formohyperins G-L (1-6), whose structures were assigned by detailed spectroscopic analysis. Formohyperins G-L (1-6) are new benzoylphloroglucinols substituted by a C10 unit, a prenyl group, and a methyl group. Formohyperins G-J (1-4) possess a 6/6/6-tricyclic structure, while formohyperins K (5) and L (6) have a unique 6/6/5/4-tetracyclic structure consisting of cyclohexadienone, dihydropyrane, cyclopentane, and cyclobutane rings. The absolute configurations of 1-6 were deduced by analysis of the ECD spectra. Formohyperins G-J (1-4) and L (6) were found to show potent inhibitory activities against IL-1ß release from LPS-treated murine microglial cells with EC50 values of 5.0, 10.9, 6.3, 10.8, and 13.7 µM, respectively, without cytotoxicity. 6-O-Methylformohyperins G (1a) and I (3a) also exhibited the inhibitory activities with EC50 values of 4.7 and 2.7 µM, respectively, although they were cytotoxic against microglial cells.


Subject(s)
Flowers , Hypericum , Phloroglucinol , Hypericum/chemistry , Animals , Phloroglucinol/chemistry , Phloroglucinol/pharmacology , Flowers/chemistry , Mice , Molecular Structure , Interleukin-1beta/metabolism , Microglia/drug effects , Microglia/metabolism , Prenylation , Plant Extracts/chemistry , Plant Extracts/pharmacology , Lipopolysaccharides/pharmacology , Cell Line
8.
J Agric Food Chem ; 72(36): 19618-19628, 2024 Sep 11.
Article in English | MEDLINE | ID: mdl-39193844

ABSTRACT

Sophora flavescens, a traditional Chinese herb, produces a wide range of secondary metabolites with a broad spectrum of biological activities. In this study, we isolated six isopentenyl flavonoids (1-6) from the roots of S. flavescens and evaluated their activities against phytopathogenic fungi. In vitro activities showed that kurarinone and sophoraflavanone G displayed broad spectrum and superior activities, among which sophoraflavanone G displayed excellent activity against tested fungi, with EC50 values ranging from 4.76 to 13.94 µg/mL. Notably, kurarinone was easily purified and showed potential activity against Rhizoctonia solani, Botrytis cinerea, and Fusarium graminearum with EC50 values of 16.12, 16.55, and 16.99 µg/mL, respectively. Consequently, we initially investigated the mechanism of kurarinone against B. cinerea. It was found that kurarinone disrupted cell wall components, impaired cell membrane integrity, increased cell membrane permeability, and affected cellular energy metabolism, thereby exerting its effect against B. cinerea. Therefore, kurarinone is expected to be a potential candidate for the development of plant fungicides.


Subject(s)
Botrytis , Flavonoids , Fungicides, Industrial , Fusarium , Plant Diseases , Plant Roots , Rhizoctonia , Sophora , Botrytis/drug effects , Botrytis/growth & development , Sophora/chemistry , Flavonoids/pharmacology , Flavonoids/chemistry , Flavonoids/isolation & purification , Fusarium/drug effects , Fungicides, Industrial/pharmacology , Fungicides, Industrial/chemistry , Plant Roots/chemistry , Plant Diseases/microbiology , Rhizoctonia/drug effects , Rhizoctonia/growth & development , Prenylation , Plant Extracts/pharmacology , Plant Extracts/chemistry , Sophora flavescens
9.
Curr Opin Plant Biol ; 81: 102601, 2024 Oct.
Article in English | MEDLINE | ID: mdl-38991464

ABSTRACT

Prenylated phenolics occur in over 4000 species in the plant kingdom, most of which are known as specialized metabolites with high chemical diversity. Many of them have been identified as pharmacologically active compounds from various medicinal plants, in which prenyl residues play a key role in these activities. Prenyltransferases (PTs) responsible for their biosynthesis have been intensively studied in the last two decades. These enzymes are membrane-bound proteins belonging to the UbiA superfamily that occurs from bacteria to humans, and in particular those involved in plant specialized metabolism show strict specificities for both substrates and products. This article reviews the enzymatic features of plant UbiA PTs, including C- and O-prenylation, molecular evolution, and application of UbiA PTs in synthetic biology.


Subject(s)
Dimethylallyltranstransferase , Plants , Prenylation , Dimethylallyltranstransferase/metabolism , Dimethylallyltranstransferase/genetics , Plants/metabolism , Plants/enzymology , Phenols/metabolism , Evolution, Molecular , Plant Proteins/metabolism , Plant Proteins/genetics
10.
J Cell Biol ; 223(10)2024 10 07.
Article in English | MEDLINE | ID: mdl-39007804

ABSTRACT

To breach the basement membrane, cells in development and cancer use large, transient, specialized lipid-rich membrane protrusions. Using live imaging, endogenous protein tagging, and cell-specific RNAi during Caenorhabditis elegans anchor cell (AC) invasion, we demonstrate that the lipogenic SREBP transcription factor SBP-1 drives the expression of the fatty acid synthesis enzymes POD-2 and FASN-1 prior to invasion. We show that phospholipid-producing LPIN-1 and sphingomyelin synthase SMS-1, which use fatty acids as substrates, produce lysosome stores that build the AC's invasive protrusion, and that SMS-1 also promotes protrusion localization of the lipid raft partitioning ZMP-1 matrix metalloproteinase. Finally, we discover that HMG-CoA reductase HMGR-1, which generates isoprenoids for prenylation, localizes to the ER and enriches in peroxisomes at the AC invasive front, and that the final transmembrane prenylation enzyme, ICMT-1, localizes to endoplasmic reticulum exit sites that dynamically polarize to deliver prenylated GTPases for protrusion formation. Together, these results reveal a collaboration between lipogenesis and a polarized lipid prenylation system that drives invasive protrusion formation.


Subject(s)
Basement Membrane , Caenorhabditis elegans Proteins , Caenorhabditis elegans , Endoplasmic Reticulum , Lipogenesis , Animals , Caenorhabditis elegans/metabolism , Caenorhabditis elegans/genetics , Basement Membrane/metabolism , Caenorhabditis elegans Proteins/metabolism , Caenorhabditis elegans Proteins/genetics , Endoplasmic Reticulum/metabolism , Lipogenesis/genetics , Prenylation , Peroxisomes/metabolism , Cell Movement , Lysosomes/metabolism
11.
Bioorg Med Chem ; 110: 117838, 2024 Aug 01.
Article in English | MEDLINE | ID: mdl-39018794

ABSTRACT

Prenylation (isopentenylation), a key post-transcriptional modification with a hydrophobic prenyl group onto the biomacromolecules such as RNA and proteins, influences their localization and function. Prenyltransferases mediate this process, while cytokinin oxidases degrade the prenylated adenosine in plants. This review summarizes current progress in detecting prenylation modifications in RNA across species and their effects on protein synthesis. Advanced methods have been developed to label and study these modifications in vitro and in vivo, despite challenges posed by the inert chemical properties of prenyl groups. Continued advancements in bioorthogonal chemistry promise new tools for understanding the precise biological functions of prenylated RNA modifications and other related proteins.


Subject(s)
Isopentenyladenosine , Isopentenyladenosine/metabolism , Isopentenyladenosine/chemistry , RNA/metabolism , RNA/chemistry , Prenylation , Humans , Animals , Adenosine/metabolism , Adenosine/chemistry
12.
Appl Microbiol Biotechnol ; 108(1): 421, 2024 Jul 18.
Article in English | MEDLINE | ID: mdl-39023782

ABSTRACT

Dimethylallyl tryptophan synthases (DMATSs) are aromatic prenyltransferases that catalyze the transfer of a prenyl moiety from a donor to an aromatic acceptor during the biosynthesis of microbial secondary metabolites. Due to their broad substrate scope, DMATSs are anticipated as biotechnological tools for producing bioactive prenylated aromatic compounds. Our study explored the substrate scope and product profile of a recombinant RePT, a novel DMATS from the thermophilic fungus Rasamsonia emersonii. Among a variety of aromatic substrates, RePT showed the highest substrate conversion for L-tryptophan and L-tyrosine (> 90%), yielding two mono-prenylated products in both cases. Nine phenolics from diverse phenolic subclasses were notably converted (> 10%), of which the stilbenes oxyresveratrol, piceatannol, pinostilbene, and resveratrol were the best acceptors (37-55% conversion). The position of prenylation was determined using NMR spectroscopy or annotated using MS2 fragmentation patterns, demonstrating that RePT mainly catalyzed mono-O-prenylation on the hydroxylated aromatic substrates. On L-tryptophan, a non-hydroxylated substrate, it preferentially catalyzed C7 prenylation with reverse N1 prenylation as a secondary reaction. Moreover, RePT also possessed substrate-dependent organic solvent tolerance in the presence of 20% (v/v) methanol or DMSO, where a significant conversion (> 90%) was maintained. Our study demonstrates the potential of RePT as a biocatalyst for the production of bioactive prenylated aromatic amino acids, stilbenes, and various phenolic compounds. KEY POINTS: • RePT catalyzes prenylation of diverse aromatic substrates. • RePT enables O-prenylation of phenolics, especially stilbenes. • The novel RePT remains active in 20% methanol or DMSO.


Subject(s)
Amino Acids, Aromatic , Dimethylallyltranstransferase , Phenols , Prenylation , Amino Acids, Aromatic/metabolism , Dimethylallyltranstransferase/metabolism , Dimethylallyltranstransferase/genetics , Phenols/metabolism , Substrate Specificity , Stilbenes/metabolism , Tryptophan/metabolism , Recombinant Proteins/metabolism , Recombinant Proteins/genetics
13.
Fitoterapia ; 177: 106112, 2024 Sep.
Article in English | MEDLINE | ID: mdl-38971332

ABSTRACT

Osage orange trees (Maclura pomifera (Raf.) C.K.Schneid.) are distributed worldwide, particularly in south-east states of the USA. They produce large quantities of strong yellow fruits, bigger than oranges, but these fruits are inedible, with an acid milky juice which is little consumed by birds and insects. Extracts prepared from Osage orange fruits (hedge apple) have revealed a range of pharmacological properties of interest in human and veterinary medicine. In addition, Osage orange extracts can be used in agriculture and aquaculture, and as dyeing agent for the textile industry. Extracts contain potent antioxidant compounds, notably the isoflavonoids pomiferin and auriculasin, together with other terpenoids and flavonoids. The structural characteristics and pharmacological properties of the major prenylated isoflavones isolated from M. pomifera are discussed here, with a focus on the two phenolic compounds osajin and warangalone, and the two catechol analogues pomiferin and auriculasin. The mechanisms at the origin of their potent antioxidant and anti-inflammatory effects are presented, notably inhibition of xanthine oxidase, phosphodiesterase 5A and kinases such as RKS2 and kRAS. Osajin and auriculasin display marked anticancer properties, owing to their ability to inhibit tumor cell proliferation, migration and tumor angiogenesis. Different molecular mechanisms are discussed, including osajin­copper complexation and binding to quadruplex DNA. An overview of the mechanism of action of the prenylated isoflavones from Osage orange is presented, with the objective to promote their knowledge and to raise opportunities to better exploit the fruits of Osage orange, abundant but largely neglected at present.


Subject(s)
Antioxidants , Fruit , Isoflavones , Maclura , Fruit/chemistry , Isoflavones/pharmacology , Isoflavones/isolation & purification , Isoflavones/chemistry , Maclura/chemistry , Humans , Antioxidants/pharmacology , Antioxidants/isolation & purification , Molecular Structure , Plant Extracts/pharmacology , Plant Extracts/chemistry , Anti-Inflammatory Agents/pharmacology , Anti-Inflammatory Agents/isolation & purification , Prenylation , Phytochemicals/pharmacology , Phytochemicals/isolation & purification , Animals , Phenols/pharmacology , Phenols/isolation & purification , Benzopyrans
14.
Am J Chin Med ; 52(4): 1087-1135, 2024.
Article in English | MEDLINE | ID: mdl-38864547

ABSTRACT

Sophora flavescens has been widely used in traditional Chinese medicine for over 1700 years. This plant is known for its heat-clearing, damp-drying, insecticidal, and diuretic properties. Phytochemical research has identified prenylated flavonoids as a unique class of bioactive compounds in S. flavescens. Recent pharmacological studies reveal that the prenylated flavonoids from S. flavescens (PFS) exhibit potent antitumor, anti-inflammatory, and glycolipid metabolism-regulating activities, offering significant therapeutic benefits for various diseases. However, the pharmacokinetics and toxicological profiles of PFS have not been systematically studied. Despite the diverse biological effects of prenylated flavonoid compounds against similar diseases, their structure-activity relationship is not yet fully understood. This review aims to summarize the latest findings regarding the chemical composition, drug metabolism, pharmacological properties, toxicity, and structure-activity relationship of prenylated flavonoids from S. flavescens. It seeks to highlight their potential for clinical use and suggest directions for future related studies.


Subject(s)
Flavonoids , Prenylation , Sophora , Sophora/chemistry , Flavonoids/chemistry , Flavonoids/pharmacology , Flavonoids/isolation & purification , Humans , Structure-Activity Relationship , Anti-Inflammatory Agents/chemistry , Anti-Inflammatory Agents/pharmacology , Phytochemicals/pharmacology , Phytochemicals/chemistry , Phytochemicals/isolation & purification , Animals , Drugs, Chinese Herbal/chemistry , Drugs, Chinese Herbal/pharmacology , Phytotherapy , Sophora flavescens
15.
Angew Chem Int Ed Engl ; 63(36): e202409973, 2024 Sep 02.
Article in English | MEDLINE | ID: mdl-38837490

ABSTRACT

Prenylation of peptides is widely observed in the secondary metabolites of diverse organisms, granting peptides unique chemical properties distinct from proteinogenic amino acids. Discovery of prenylated peptide agents has largely relied on isolation or genome mining of naturally occurring molecules. To devise a platform technology for de novo discovery of artificial prenylated peptides targeting a protein of choice, here we have integrated the thioether-macrocyclic peptide (teMP) library construction/selection technology, so-called RaPID (Random nonstandard Peptides Integrated Discovery) system, with a Trp-C3-prenyltransferase KgpF involved in the biosynthesis of a prenylated natural product. This unique enzyme exhibited remarkably broad substrate tolerance, capable of modifying various Trp-containing teMPs to install a prenylated residue with tricyclic constrained structure. We constructed a vast library of prenylated teMPs and subjected it to in vitro selection against a phosphoglycerate mutase. This selection platform has led to the identification of a pseudo-natural prenylated teMP inhibiting the target enzyme with an IC50 of 30 nM. Importantly, the prenylation was essential for the inhibitory activity, enhanced serum stability, and cellular uptake of the peptide, highlighting the benefits of peptide prenylation. This work showcases the de novo discovery platform for pseudo-natural prenylated peptides, which is readily applicable to other drug targets.


Subject(s)
Prenylation , Ligands , Humans , Peptides, Cyclic/chemistry , Peptides, Cyclic/pharmacology , Peptides, Cyclic/metabolism , Peptides/chemistry , Peptides/metabolism , Peptides/pharmacology , Macrocyclic Compounds/chemistry , Macrocyclic Compounds/pharmacology , Macrocyclic Compounds/metabolism , Biological Products/chemistry , Biological Products/pharmacology , Biological Products/metabolism , Dimethylallyltranstransferase/metabolism , Dimethylallyltranstransferase/chemistry , Dimethylallyltranstransferase/antagonists & inhibitors , Protein Prenylation
16.
Faraday Discuss ; 252(0): 208-222, 2024 Sep 11.
Article in English | MEDLINE | ID: mdl-38837123

ABSTRACT

The prenylated-flavin mononucleotide-dependent decarboxylases (also known as UbiD-like enzymes) are the most recently discovered family of decarboxylases. The modified flavin facilitates the decarboxylation of unsaturated carboxylic acids through a novel mechanism involving 1,3-dipolar cyclo-addition chemistry. UbiD-like enzymes have attracted considerable interest for biocatalysis applications due to their ability to catalyse (de)carboxylation reactions on a broad range of aromatic substrates at otherwise unreactive carbon centres. There are now ∼35 000 protein sequences annotated as hypothetical UbiD-like enzymes. Sequence similarity network analyses of the UbiD protein family suggests that there are likely dozens of distinct decarboxylase enzymes represented within this family. Furthermore, many of the enzymes so far characterized can decarboxylate a broad range of substrates. Here we describe a strategy to identify potential substrates of UbiD-like enzymes based on detecting enzyme-catalysed solvent deuterium exchange into potential substrates. Using ferulic acid decarboxylase (FDC) as a model system, we tested a diverse range of aromatic and heterocyclic molecules for their ability to undergo enzyme-catalysed H/D exchange in deuterated buffer. We found that FDC catalyses H/D exchange, albeit at generally very low levels, into a wide range of small, aromatic molecules that have little resemblance to its physiological substrate. In contrast, the sub-set of aromatic carboxylic acids that are substrates for FDC-catalysed decarboxylation is much smaller. We discuss the implications of these findings for screening uncharacterized UbiD-like enzymes for novel (de)carboxylase activity.


Subject(s)
Biocatalysis , Carboxy-Lyases , Carboxy-Lyases/metabolism , Carboxy-Lyases/chemistry , Decarboxylation , Prenylation , Substrate Specificity , Flavins/metabolism , Flavins/chemistry , Flavin Mononucleotide/metabolism , Flavin Mononucleotide/chemistry
17.
J Antibiot (Tokyo) ; 77(7): 403-411, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38750250

ABSTRACT

Two new cyclic dipeptides, paranazzamides A (1) and B (2) containing a C7-prenylated tryptophan, were isolated from a culture broth of snake fungal disease-isolate Paranannizziopsis sp. UH-21. This is the first report on the new secondary metabolites from Paranannizziopsis sp. The planar structures of 1 and 2 were elucidated using various spectroscopic techniques including MS and 1D/2D NMR. The absolute configuration of 1 was assigned by comparison with the synthesized compound. Compounds 1 and 2 exhibited no antifungal activity, no antibacterial activity, and no cytotoxic activity even at a concentration of 128 µg ml-1, whereas 1 and 2 exhibited amphotericin B potentiating activity against Candida auris in combination treatment.


Subject(s)
Dipeptides , Peptides, Cyclic , Tryptophan , Tryptophan/chemistry , Tryptophan/metabolism , Dipeptides/chemistry , Dipeptides/isolation & purification , Dipeptides/pharmacology , Peptides, Cyclic/chemistry , Peptides, Cyclic/pharmacology , Peptides, Cyclic/isolation & purification , Animals , Antifungal Agents/pharmacology , Antifungal Agents/chemistry , Antifungal Agents/isolation & purification , Magnetic Resonance Spectroscopy , Microbial Sensitivity Tests , Anti-Bacterial Agents/pharmacology , Anti-Bacterial Agents/chemistry , Anti-Bacterial Agents/isolation & purification , Candida/drug effects , Prenylation , Amphotericin B/pharmacology , Molecular Structure , Humans
18.
Phytochemistry ; 224: 114149, 2024 Aug.
Article in English | MEDLINE | ID: mdl-38763314

ABSTRACT

Farnesylated chalcones were favored by researchers due to their different biological activities. However, only five naturally occurring farnesylated chalcones were described in the literature until now. Here, the farnesylation of six chalcones by the Aspergillus terreus aromatic prenyltransferase AtaPT was reported. Fourteen monofarnesylated chalcones (1F1-1F5, 2F1-2F3, 3F1, 3F2, 4F1, 4F2, 5F1, 6F1, and 6F2) and a difarnesylated product (2F3) were obtained, enriching the diversity of natural farnesylated chalcones significantly. Ten of them are C-farnesylated products, which complement O-farnesylated chalcones by chemical synthesis. Fourteen products have not been reported prior to this study. Nine of the produced compounds (1F2-1F5, 2F1-2F3, 5F1, and 6F1) exhibited inhibitory effect on α-glucosidase with IC50 values ranging from 24.08 ± 1.44 to 190.0 ± 0.28 µM. Among them, compounds 2F3 with IC50 value at 24.08 ± 1.44 µM and 1F4 with IC50 value at 30.09 ± 0.59 µM showed about 20 times stronger than the positive control acarbose with an IC50 at 536.87 ± 24.25 µM in α-glucosidase inhibitory assays.


Subject(s)
Aspergillus , Chalcones , Dimethylallyltranstransferase , Dimethylallyltranstransferase/metabolism , Dimethylallyltranstransferase/chemistry , Dimethylallyltranstransferase/antagonists & inhibitors , Chalcones/chemistry , Chalcones/pharmacology , Chalcones/metabolism , Aspergillus/enzymology , Aspergillus/chemistry , Molecular Structure , Prenylation , Structure-Activity Relationship , Glycoside Hydrolase Inhibitors/chemistry , Glycoside Hydrolase Inhibitors/pharmacology , alpha-Glucosidases/metabolism , alpha-Glucosidases/chemistry , Dose-Response Relationship, Drug
19.
Phytochemistry ; 223: 114119, 2024 Jul.
Article in English | MEDLINE | ID: mdl-38705266

ABSTRACT

Six previously undescribed prenylated indole diketopiperazine alkaloids, talaromyines A-F (1-6), were isolated from the marine-derived fungus Talaromyces purpureogenus SCSIO 41517. Their structures including absolute configurations were elucidated on the basis of comprehensive spectroscopic data including NMR, HR-ESI-MS, and electronic circular dichroism calculations, together with chemical analysis of hydrolysates. Compounds 1-5 represent the first example of spirocyclic indole diketopiperazines biosynthesized from the condensation of L-tryptophan and L-alanine. Compounds 2 and 4-5 showed selective inhibitory activities against phosphatases TCPTP and MEG2 with IC50 value of 17.9-29.7 µM, respectively. Compounds 4-5 exhibited mild cytotoxic activities against two human cancer cell lines H1975 and HepG-2.


Subject(s)
Diketopiperazines , Talaromyces , Talaromyces/chemistry , Diketopiperazines/chemistry , Diketopiperazines/pharmacology , Diketopiperazines/isolation & purification , Humans , Molecular Structure , Prenylation , Drug Screening Assays, Antitumor , Structure-Activity Relationship , Antineoplastic Agents/pharmacology , Antineoplastic Agents/chemistry , Antineoplastic Agents/isolation & purification , Indole Alkaloids/isolation & purification , Indole Alkaloids/chemistry , Indole Alkaloids/pharmacology , Alkaloids/chemistry , Alkaloids/pharmacology , Alkaloids/isolation & purification , Dose-Response Relationship, Drug , Enzyme Inhibitors/pharmacology , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/isolation & purification , Hep G2 Cells , Cell Proliferation/drug effects , Phosphoric Monoester Hydrolases/antagonists & inhibitors , Phosphoric Monoester Hydrolases/metabolism , Cell Line, Tumor
20.
J Nat Prod ; 87(5): 1454-1458, 2024 May 24.
Article in English | MEDLINE | ID: mdl-38668715

ABSTRACT

Collembola are closely related to insects, but our knowledge of their often unique chemistry is limited. Here we report the identification of the epicuticular lipid nitidane, representing a novel class of epicuticular lipids. Nitidane (4) is an irregular terpene consisting of seven isoprene units, made up of a diterpene core that is modified by a geranyl moiety that is itself prenylated. The observed [46+(22+11)1]-terpene structure has not been reported before.


Subject(s)
Diterpenes , Animals , Diterpenes/chemistry , Diterpenes/isolation & purification , Molecular Structure , Prenylation , Lipids/chemistry
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