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1.
Molecules ; 25(17)2020 Sep 01.
Article in English | MEDLINE | ID: mdl-32882836

ABSTRACT

Giardiasis is a diarrheal disease that is highly prevalent in developing countries. Several drugs are available for the treatment of this parasitosis; however, failures in drug therapy are common, and have adverse effects and increased resistance of the parasite to the drug, generating the need to find new alternative treatments. In this study, we synthesized a series of 2-mercaptobenzimidazoles that are derivatives of omeprazole, and the chemical structures were confirmed through mass, 1H NMR, and 13C NMR techniques. The in vitro efficacy compounds against Giardia, as well as its effect on the inhibition of triosephosphate isomerase (TPI) recombinant, were investigated, the inactivation assays were performed with 0.2 mg/mL of the enzyme incubating for 2 h at 37 °C in TE buffer, pH 7.4 with increasing concentrations of the compounds. Among the target compounds, H-BZM2, O2N-BZM7, and O2N-BZM9 had greater antigiardial activity (IC50: 36, 14, and 17 µM on trophozoites), and inhibited the TPI enzyme (K2: 2.3, 3.2, and 2.8 M-1 s-1) respectively, loading alterations on the secondary structure, global stability, and tertiary structure of the TPI protein. Finally, we demonstrated that it had low toxicity on Caco-2 and HT29 cells. This finding makes it an attractive potential starting point for new antigiardial drugs.


Subject(s)
Antiprotozoal Agents/pharmacology , Benzimidazoles/pharmacology , Giardia lamblia/drug effects , Omeprazole/pharmacology , Antiprotozoal Agents/chemical synthesis , Antiprotozoal Agents/chemistry , Benzimidazoles/chemical synthesis , Benzimidazoles/chemistry , Caco-2 Cells , Cell Death/drug effects , Cell Survival/drug effects , Circular Dichroism , Drug Design , Drug Evaluation, Preclinical , Enzyme Activation/drug effects , Giardia lamblia/enzymology , HT29 Cells , Humans , Kinetics , Lansoprazole/pharmacology , Molecular Docking Simulation , Omeprazole/chemical synthesis , Omeprazole/chemistry , Spectrometry, Fluorescence , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/chemistry , Trophozoites/drug effects
2.
Biomolecules ; 10(7)2020 07 15.
Article in English | MEDLINE | ID: mdl-32679775

ABSTRACT

Therapeutic strategies for the treatment of any severe disease are based on the discovery and validation of druggable targets. The human genome encodes only 600-1500 targets for small-molecule drugs, but posttranslational modifications lead to a considerably larger druggable proteome. The spontaneous conversion of asparagine (Asn) residues to aspartic acid or isoaspartic acid is a frequent modification in proteins as part of the process called deamidation. Triosephosphate isomerase (TIM) is a glycolytic enzyme whose deamidation has been thoroughly studied, but the prospects of exploiting this phenomenon for drug design remain poorly understood. The purpose of this study is to demonstrate the properties of deamidated human TIM (HsTIM) as a selective molecular target. Using in silico prediction, in vitro analyses, and a bacterial model lacking the tim gene, this study analyzed the structural and functional differences between deamidated and nondeamidated HsTIM, which account for the efficacy of this protein as a druggable target. The highly increased permeability and loss of noncovalent interactions of deamidated TIM were found to play a central role in the process of selective enzyme inactivation and methylglyoxal production. This study elucidates the properties of deamidated HsTIM regarding its selective inhibition by thiol-reactive drugs and how these drugs can contribute to the development of cell-specific therapeutic strategies for a variety of diseases, such as COVID-19 and cancer.


Subject(s)
Coronavirus Infections/drug therapy , Enzyme Inhibitors/pharmacology , Neoplasms/drug therapy , Pneumonia, Viral/drug therapy , Small Molecule Libraries/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Amides/antagonists & inhibitors , Amides/metabolism , COVID-19 , Crystallography, X-Ray , Enzyme Inhibitors/chemistry , Humans , Models, Molecular , Mutation , Pandemics , Proteome/antagonists & inhibitors , Proteome/genetics , Proteome/metabolism , Recombinant Proteins/chemistry , Recombinant Proteins/isolation & purification , Recombinant Proteins/metabolism , Small Molecule Libraries/chemistry , Triose-Phosphate Isomerase/chemistry , Triose-Phosphate Isomerase/metabolism
3.
Parasitol Int ; 76: 102086, 2020 Jun.
Article in English | MEDLINE | ID: mdl-32112829

ABSTRACT

Trichomonas vaginalis is the protozoan parasite responsible for the most prevalent, non-viral, sexually transmitted disease, which affects millions of people around the world. The main treatment against this disease is metronidazole and some other nitroimidazole derivatives. However, between five and 20% of clinical cases of trichomoniasis are caused by parasites resistant to these drugs. Here we present three compounds that were selected using an innovative strategy, to propose them as possible drugs to combat trichomoniasis, using the glycolytic enzyme triose phosphate isomerase (TvTIM) as the drug target. In the genome of Trichomonas vaginalis there are two genes that encode for two isoforms of TvTIM, known as TvTIM1 and TvTIM2, varying by four out of 254 aminoacid residues. In this study, we used high-throughput virtual screening to search molecules that bind specifically to TvTIM isoforms, in which 34 compounds were selected from a library of nearly 450,000 compounds. The effects of the 34 compounds on the conformation and enzymatic activity of both TvTIM isoforms and their human homolog (HsTIM) were evaluated. We found three compounds that bind specifically, modify the conformation and inhibit TvTIM2 only; although the sequence of both isoforms of TvTIM is almost identical. The selectivity of these compounds towards TvTIM2 is explained by the lower conformational stability of this isoform and that these interactions can inhibit the activity of this enzyme and have an effect against this parasite. These compounds represent promising alternatives for the development of new therapeutic strategies against trichomoniasis.


Subject(s)
Antiprotozoal Agents/pharmacology , Trichomonas Infections/prevention & control , Trichomonas vaginalis/drug effects , Triose-Phosphate Isomerase/antagonists & inhibitors , High-Throughput Screening Assays , Humans
4.
Sci Rep ; 10(1): 2587, 2020 02 13.
Article in English | MEDLINE | ID: mdl-32054976

ABSTRACT

Trematode infections such as schistosomiasis and fascioliasis cause significant morbidity in an estimated 250 million people worldwide and the associated agricultural losses are estimated at more than US$ 6 billion per year. Current chemotherapy is limited. Triosephosphate isomerase (TIM), an enzyme of the glycolytic pathway, has emerged as a useful drug target in many parasites, including Fasciola hepatica TIM (FhTIM). We identified 21 novel compounds that selectively inhibit this enzyme. Using microscale thermophoresis we explored the interaction between target and compounds and identified a potent interaction between the sulfonyl-1,2,4-thiadiazole (compound 187) and FhTIM, which showed an IC50 of 5 µM and a Kd of 66 nM. In only 4 hours, this compound killed the juvenile form of F. hepatica with an IC50 of 3 µM, better than the reference drug triclabendazole (TCZ). Interestingly, we discovered in vitro inhibition of FhTIM by TCZ, with an IC50 of 7 µM suggesting a previously uncharacterized role of FhTIM in the mechanism of action of this drug. Compound 187 was also active against various developmental stages of Schistosoma mansoni. The low toxicity in vitro in different cell types and lack of acute toxicity in mice was demonstrated for this compound, as was demonstrated the efficacy of 187 in vivo in F. hepatica infected mice. Finally, we obtained the first crystal structure of FhTIM at 1.9 Å resolution which allows us using docking to suggest a mechanism of interaction between compound 187 and TIM. In conclusion, we describe a promising drug candidate to control neglected trematode infections in human and animal health.


Subject(s)
Anthelmintics/chemistry , Anthelmintics/pharmacology , Trematoda/drug effects , Trematoda/enzymology , Trematode Infections/drug therapy , Triose-Phosphate Isomerase/antagonists & inhibitors , Animals , Anthelmintics/therapeutic use , Crystallography, X-Ray , Drug Discovery , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/pharmacology , Enzyme Inhibitors/therapeutic use , Fasciola hepatica/drug effects , Fasciola hepatica/enzymology , Fascioliasis/drug therapy , Fascioliasis/parasitology , Female , Male , Mesocricetus , Mice , Mice, Inbred BALB C , Models, Molecular , Schistosoma mansoni/drug effects , Schistosoma mansoni/enzymology , Schistosomiasis mansoni/drug therapy , Schistosomiasis mansoni/parasitology , Trematode Infections/parasitology , Triose-Phosphate Isomerase/metabolism
5.
Sci Rep ; 9(1): 8922, 2019 06 20.
Article in English | MEDLINE | ID: mdl-31222100

ABSTRACT

Research on Giardia lamblia has accumulated large information about its molecular cell biology and infection biology. However, giardiasis is still one of the commonest parasitic diarrheal diseases affecting humans. Additionally, an alarming increase in cases refractory to conventional treatment has been reported in low prevalence settings. Consequently, efforts directed toward supporting the efficient use of alternative drugs, and the study of their molecular targets appears promising. Repurposing of proton pump inhibitors is effective in vitro against the parasite and the toxic activity is associated with the inhibition of the G. lamblia triosephosphate isomerase (GlTIM) via the formation of covalent adducts with cysteine residue at position 222. Herein, we evaluate the effectiveness of omeprazole in vitro and in situ on GlTIM mutants lacking the most superficial cysteines. We studied the influence on the glycolysis of Giardia trophozoites treated with omeprazole and characterized, for the first time, the morphological effect caused by this drug on the parasite. Our results support the effectiveness of omeprazole against GlTIM despite of the possibility to mutate the druggable amino acid targets as an adaptive response. Also, we further characterized the effect of omeprazole on trophozoites and discuss the possible mechanism involved in its antigiardial effect.


Subject(s)
Antiprotozoal Agents/pharmacology , Giardia lamblia/drug effects , Omeprazole/pharmacology , Animals , Enzyme Inhibitors/pharmacology , Enzyme Stability , Giardia lamblia/ultrastructure , Glycation End Products, Advanced/metabolism , Humans , Inhibitory Concentration 50 , Kinetics , Pyruvaldehyde/metabolism , Temperature , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/metabolism
6.
Chem Biol Drug Des ; 93(3): 337-350, 2019 03.
Article in English | MEDLINE | ID: mdl-30362274

ABSTRACT

Chagas disease is caused by infection with the parasite protozoan Trypanosoma cruzi and affects about 8 million people in 21 countries in Latin America. The main form of treatment of this disease is still based on the use of two drugs, benznidazole and nifurtimox, which both present low cure rates in the chronic phase and often have serious side-effects. Herein, we describe the synthesis of tricyclic coumarins that were obtained via NHC organocatalysis and evaluation of their trypanocidal activity. Molecular docking studies against trypanosomal enzyme triosephosphate isomerase (TIM) were carried out, as well as a theoretical study of the physicochemical parameters. The tricyclic coumarins were tested in vitro against the intracellular forms of Trypanosoma cruzi. Among the 18 compounds tested, 10 were more active than the reference drug benznidazole. The trypanocidal activity of the lead compound was rationalized by molecular docking study which suggested the strong interaction with the enzyme TIM by T. cruzi and therefore indicating a possible mode of action. Furthermore, the selectivity index of eight tricyclic coumarins with high anti-T. cruzi activity was above 50 and thus showing that these lead compounds are viable candidates for further in vivo assays.


Subject(s)
Coumarins/chemistry , Drug Design , Trypanocidal Agents/chemical synthesis , Binding Sites , Catalytic Domain , Coumarins/metabolism , Coumarins/pharmacology , Humans , Protozoan Proteins/antagonists & inhibitors , Protozoan Proteins/metabolism , Structure-Activity Relationship , Thermodynamics , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/metabolism , Trypanocidal Agents/metabolism , Trypanocidal Agents/pharmacology , Trypanosoma cruzi/drug effects
7.
Sci Rep ; 8(1): 8591, 2018 06 05.
Article in English | MEDLINE | ID: mdl-29872223

ABSTRACT

The microsporidia are a large group of intracellular parasites with a broad range of hosts, including humans. Encephalitozoon intestinalis is the second microsporidia species most frequently associated with gastrointestinal disease in humans, especially immunocompromised or immunosuppressed individuals, including children and the elderly. The prevalence reported worldwide in these groups ranges from 0 to 60%. Currently, albendazole is most commonly used to treat microsporidiosis caused by Encephalitozoon species. However, the results of treatment are variable, and relapse can occur. Consequently, efforts are being directed toward identifying more effective drugs for treating microsporidiosis, and the study of new molecular targets appears promising. These parasites lack mitochondria, and oxidative phosphorylation therefore does not occur, which suggests the enzymes involved in glycolysis as potential drug targets. Here, we have for the first time characterized the glycolytic enzyme triosephosphate isomerase of E. intestinalis at the functional and structural levels. Our results demonstrate the mechanisms of inactivation of this enzyme by thiol-reactive compounds. The most striking result of this study is the demonstration that established safe drugs such as omeprazole, rabeprazole and sulbutiamine can effectively inactivate this microsporidial enzyme and might be considered as potential drugs for treating this important disease.


Subject(s)
Albendazole/therapeutic use , Fungal Proteins/antagonists & inhibitors , Microsporidia/drug effects , Microsporidiosis/drug therapy , Triose-Phosphate Isomerase/antagonists & inhibitors , Amino Acid Sequence , Encephalitozoon/drug effects , Encephalitozoon/enzymology , Encephalitozoon/genetics , Fungal Proteins/genetics , Fungal Proteins/metabolism , Gastrointestinal Diseases/drug therapy , Gastrointestinal Diseases/microbiology , Gene Expression Regulation, Enzymologic/drug effects , Gene Expression Regulation, Fungal/drug effects , Humans , Microsporidia/enzymology , Microsporidia/genetics , Microsporidiosis/microbiology , Omeprazole/therapeutic use , Rabeprazole/therapeutic use , Sequence Homology, Amino Acid , Thiamine/analogs & derivatives , Thiamine/therapeutic use , Triose-Phosphate Isomerase/genetics , Triose-Phosphate Isomerase/metabolism
8.
Mem Inst Oswaldo Cruz ; 113(3): 153-160, 2018 Mar.
Article in English | MEDLINE | ID: mdl-29412353

ABSTRACT

BACKGROUND: The current chemotherapy for Chagas disease is based on monopharmacology with low efficacy and drug tolerance. Polypharmacology is one of the strategies to overcome these limitations. OBJECTIVES: Study the anti-Trypanosoma cruzi activity of associations of benznidazole (Bnz) with three new synthetic T. cruzi-triosephosphate isomerase inhibitors, 2, 3, and 4, in order to potentiate their actions. METHODS: The in vitro effect of the drug combinations were determined constructing the corresponding isobolograms. In vivo activities were assessed using an acute murine model of Chagas disease evaluating parasitaemias, mortalities and IgG anti-T. cruzi antibodies. FINDINGS: The effect of Bnz combined with each of these compounds, on the growth of epimastigotes, indicated an additive action or a synergic action, when combining it with 2 or 3, respectively, and an antagonic action when combining it with 4. In vivo studies, for the two chosen combinations, 2 or 3 plus one fifth equivalent of Bnz, showed that Bnz can also potentiate the in vivo therapeutic effects. For both combinations a decrease in the number of trypomastigote and lower levels of anti-T. cruzi IgG-antibodies were detected, as well clear protection against death. MAIN CONCLUSIONS: These results suggest the studied combinations could be used in the treatment of Chagas disease.


Subject(s)
Chagas Disease/drug therapy , Nitroimidazoles/pharmacology , Triose-Phosphate Isomerase/pharmacology , Trypanocidal Agents/pharmacology , Trypanosoma cruzi/drug effects , Animals , Antibodies, Protozoan/blood , Drug Combinations , Drug Synergism , Drugs, Investigational , Immunoglobulin G/blood , Male , Mice , Mice, Inbred BALB C , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/chemistry , Trypanosoma cruzi/immunology
9.
Molecules ; 22(12)2017 11 24.
Article in English | MEDLINE | ID: mdl-29186784

ABSTRACT

Human African Trypanosomiasis (HAT), a disease that provokes 2184 new cases a year in Sub-Saharan Africa, is caused by Trypanosoma brucei. Current treatments are limited, highly toxic, and parasite strains resistant to them are emerging. Therefore, there is an urgency to find new drugs against HAT. In this context, T. brucei depends on glycolysis as the unique source for ATP supply; therefore, the enzyme triosephosphate isomerase (TIM) is an attractive target for drug design. In the present work, three new benzimidazole derivatives were found as TbTIM inactivators (compounds 1, 2 and 3) with an I50 value of 84, 82 and 73 µM, respectively. Kinetic analyses indicated that the three molecules were selective when tested against human TIM (HsTIM) activity. Additionally, to study their binding mode in TbTIM, we performed a 100 ns molecular dynamics simulation of TbTIM-inactivator complexes. Simulations showed that the binding of compounds disturbs the structure of the protein, affecting the conformations of important domains such as loop 6 and loop 8. In addition, the physicochemical and drug-like parameters showed by the three compounds suggest a good oral absorption. In conclusion, these molecules will serve as a guide to design more potent inactivators that could be used to obtain new drugs against HAT.


Subject(s)
Benzimidazoles/chemical synthesis , Models, Molecular , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanocidal Agents/chemical synthesis , Trypanosoma brucei brucei/drug effects , Benzimidazoles/pharmacology , Drug Design , Humans , Kinetics , Protein Binding , Protein Conformation , Species Specificity , Thermodynamics , Triose-Phosphate Isomerase/metabolism , Trypanocidal Agents/pharmacology , Trypanosoma brucei brucei/enzymology , Trypanosomiasis, African/drug therapy
10.
ChemMedChem ; 11(12): 1328-38, 2016 06 20.
Article in English | MEDLINE | ID: mdl-26492824

ABSTRACT

Triosephosphate isomerase (TIM) is an essential Trypanosoma cruzi enzyme and one of the few validated drug targets for Chagas disease. The known inhibitors of this enzyme behave poorly or have low activity in the parasite. In this work, we used symmetrical diarylideneketones derived from structures with trypanosomicidal activity. We obtained an enzymatic inhibitor with an IC50 value of 86 nm without inhibition effects on the mammalian enzyme. These molecules also affected cruzipain, another essential proteolytic enzyme of the parasite. This dual activity is important to avoid resistance problems. The compounds were studied in vitro against the epimastigote form of the parasite, and nonspecific toxicity to mammalian cells was also evaluated. As a proof of concept, three of the best derivatives were also assayed in vivo. Some of these derivatives showed higher in vitro trypanosomicidal activity than the reference drugs and were effective in protecting infected mice. In addition, these molecules could be obtained by a simple and economic green synthetic route, which is an important feature in the research and development of future drugs for neglected diseases.


Subject(s)
Antiprotozoal Agents/pharmacology , Cysteine Endopeptidases/metabolism , Enzyme Inhibitors/pharmacology , Protozoan Proteins/antagonists & inhibitors , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanosoma cruzi/drug effects , Animals , Antiprotozoal Agents/chemistry , Antiprotozoal Agents/therapeutic use , Binding Sites , Chagas Disease/drug therapy , Cysteine Endopeptidases/chemistry , Disease Models, Animal , Enzyme Inhibitors/chemistry , Enzyme Inhibitors/therapeutic use , Ketones/chemistry , Ketones/pharmacology , Ketones/therapeutic use , Mice , Molecular Docking Simulation , Protein Structure, Tertiary , Protozoan Proteins/metabolism , Structure-Activity Relationship , Triose-Phosphate Isomerase/metabolism , Trypanosoma cruzi/growth & development
11.
Eur J Med Chem ; 100: 246-56, 2015 Jul 15.
Article in English | MEDLINE | ID: mdl-26094151

ABSTRACT

The neglected disease American trypanosomiasis is one of the major health problems in Latin America. Triosephosphate isomerase from Trypanosoma cruzi (TcTIM), the etiologic agent of this disease, has been proposed as a druggable target. Some bis-benzothiazoles have been described as irreversible inhibitors of this enzyme. On the other hand, new bioactive furane-containing thiazoles have been described as excellent in vivo anti-T. cruzi agents. This encouraged us to design and develop new bis-thiazoles with potential use as drugs for American trypanosomiasis. The bis-thiazol 5, 3,3'-allyl-2,2'-bis[3-(2-furyl)-2-propenylidenehydrazono]-2,2',3,3'-tetrahydro-4,4'-bisthiazole, showed the best in vitro anti-T. cruzi profile with a higher selectivity index than the reference drugs Nifurtimox and Benznidazole against amastigote form of the parasite. This derivative displayed marginal activity against TcTIM however the bis-thiazol 14, 3-allyl-2-[3-(2-furyl)-2-propenylidenehydrazono]-3'-phenyl-2'-(3-phenyl-2-propenylidenehydrazono]-2,2',3,3'-tetrahydro-4,4'-bisthiazole, was an excellent inhibitor of the enzyme of the parasite. The absence of both in vitro mutagenic and in vivo toxicity effects, together with the activity of bis-thiazol 5in vivo, suggests that this compound is a promising anti-T. cruzi agent surpassing the "hit-to-lead" stage in the drug development process.


Subject(s)
Enzyme Inhibitors/pharmacology , Thiazoles/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanocidal Agents/pharmacology , Trypanosoma cruzi/drug effects , Trypanosoma cruzi/enzymology , Animals , Cell Line , Dose-Response Relationship, Drug , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Hydrophobic and Hydrophilic Interactions , Macrophages , Mice , Molecular Structure , Parasitic Sensitivity Tests , Structure-Activity Relationship , Thiazoles/chemical synthesis , Thiazoles/chemistry , Triose-Phosphate Isomerase/metabolism , Trypanocidal Agents/chemical synthesis , Trypanocidal Agents/chemistry
12.
J Mol Graph Model ; 58: 40-9, 2015 May.
Article in English | MEDLINE | ID: mdl-25829097

ABSTRACT

Trypanosoma cruzi (T. cruzi) triosephosphate isomerase (TcTIM) is a glycolytic enzyme essential for parasite survival and has been considered an interesting target for the development of new antichagasic compounds. The homodimeric enzyme is catalytically active only as a dimer. Interestingly, significant differences exist between the human and parasite TIMs interfaces with a sequence identity of 52%. Therefore, compounds able to specifically disrupt TcTIM but not Homo sapiens TIM (hTIM) dimer interface could become selective antichagasic drugs. In the present work, the binding modes of 1,2,4-thiadiazol, phenazine and 1,2,6-thiadiazine derivatives to TcTIM were investigated using molecular docking combined with molecular dynamics (MD) simulations. The results show that phenazine and 1,2,6-thiadiazine derivatives, 2 and 3, act as dimer-disrupting inhibitors of TcTIM having also allosteric effects in the conformation of the active site. On the other hand, the 1,2,4-thiadiazol derivative 1 binds into the active site causing a significant decrease in enzyme mobility in both monomers. The loss of conformational flexibility upon compound 1 binding suggests that this inhibitor could be preventing essential motions of the enzyme required for optimal activity. The lack of inhibitory activity of 1 against hTIM was also investigated and seems to be related with the high mobility of hTIM which would hinder the formation of a stable ligand-enzyme complex. This work has contributed to understand the mechanism of action of this kind of inhibitors and could result of great help for future rational novel drug design.


Subject(s)
Enzyme Inhibitors/chemistry , Enzyme Inhibitors/metabolism , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanosoma cruzi/enzymology , Catalytic Domain , Drug Design , Enzyme Inhibitors/pharmacology , Molecular Docking Simulation , Molecular Dynamics Simulation , Phenazines/chemistry , Phenazines/metabolism , Thiadiazines/chemistry , Thiadiazines/metabolism , Thiadiazoles/chemistry , Thiadiazoles/metabolism , Triose-Phosphate Isomerase/chemistry , Triose-Phosphate Isomerase/metabolism
13.
Antimicrob Agents Chemother ; 58(12): 7072-82, 2014 Dec.
Article in English | MEDLINE | ID: mdl-25223993

ABSTRACT

Giardiasis is highly prevalent in the developing world, and treatment failures with the standard drugs are common. This work deals with the proposal of omeprazole as a novel antigiardial drug, focusing on a giardial glycolytic enzyme used to follow the cytotoxic effect at the molecular level. We used recombinant technology and enzyme inactivation to demonstrate the capacity of omeprazole to inactivate giardial triosephosphate isomerase, with no adverse effects on its human counterpart. To establish the specific target in the enzyme, we used single mutants of every cysteine residue in triosephosphate isomerase. The effect on cellular triosephosphate isomerase was evaluated by following the remnant enzyme activity on trophozoites treated with omeprazole. The interaction of omeprazole with giardial proteins was analyzed by fluorescence spectroscopy. The susceptibility to omeprazole of drug-susceptible and drug-resistant strains of Giardia lamblia was evaluated to demonstrate its potential as a novel antigiardial drug. Our results demonstrate that omeprazole inhibits giardial triosephosphate isomerase in a species-specific manner through interaction with cysteine at position 222. Omeprazole enters the cytoplasmic compartment of the trophozoites and inhibits cellular triosephosphate isomerase activity in a dose-dependent manner. Such inhibition takes place concomitantly with the cytotoxic effect caused by omeprazole on trophozoites. G. lamblia triosephosphate isomerase (GlTIM) is a cytoplasmic protein which can help analyses of how omeprazole works against the proteins of this parasite and in the effort to understand its mechanism of cytotoxicity. Our results demonstrate the mechanism of giardial triosephosphate isomerase inhibition by omeprazole and show that this drug is effective in vitro against drug-resistant and drug-susceptible strains of G. lamblia.


Subject(s)
Antiprotozoal Agents/pharmacology , Enzyme Inhibitors/pharmacology , Giardia lamblia/drug effects , Omeprazole/pharmacology , Protozoan Proteins/antagonists & inhibitors , Triose-Phosphate Isomerase/antagonists & inhibitors , Trophozoites/drug effects , Albendazole/pharmacology , Axenic Culture , Cysteine/chemistry , Cysteine/metabolism , Dose-Response Relationship, Drug , Drug Resistance , Escherichia coli/genetics , Escherichia coli/metabolism , Gene Expression , Giardia lamblia/enzymology , Giardia lamblia/growth & development , Giardia lamblia/isolation & purification , Humans , Metronidazole/pharmacology , Mutation , Nitro Compounds , Parasitic Sensitivity Tests , Protozoan Proteins/genetics , Protozoan Proteins/metabolism , Recombinant Proteins/genetics , Recombinant Proteins/metabolism , Spectrometry, Fluorescence , Thiazoles/pharmacology , Triose-Phosphate Isomerase/genetics , Triose-Phosphate Isomerase/metabolism , Trophozoites/enzymology , Trophozoites/growth & development
14.
J Enzyme Inhib Med Chem ; 29(2): 198-204, 2014 Apr.
Article in English | MEDLINE | ID: mdl-23406473

ABSTRACT

CONTEXT: Triosephosphate isomerase (TIM) is a ubiquitous enzyme that has been targeted for the discovery of new small molecular weight compounds used against Trypanosoma cruzi, the causative agent of Chagas disease. We have identified phenazine and 1,2,6-thiadiazine chemotypes as novel inhibitors of TIM from T. cruzi (TcTIM). OBJECTIVE: Study the mechanism of TcTIM inhibition by a phenazine derivative and by a 1,2,6-thiadiazine derivative. METHODS: We performed biochemical and theoretical molecular docking studies to characterize the interaction of the derivatives with wild-type and mutant TcTIM. RESULTS AND CONCLUSION: At low micromolar concentrations, the compounds induce highly selective irreversible inactivation of parasitic TIM. The molecular docking simulations indicate that the phenazine derivative likely interferes with the association of the two monomers of the dimeric enzyme by locating at the dimer interface, while 1,2,6-thiadiazine could act as an inhibitor binding to a region surrounding Cys-118.


Subject(s)
Antiprotozoal Agents/pharmacology , Enzyme Inhibitors/pharmacology , Phenazines/pharmacology , Thiadiazines/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanosoma cruzi/drug effects , Antiprotozoal Agents/chemistry , Binding, Competitive , Chagas Disease/drug therapy , Electrophoresis, Polyacrylamide Gel , Enzyme Inhibitors/chemistry , Escherichia coli/genetics , Models, Biological , Molecular Docking Simulation , Molecular Structure , Parasitic Sensitivity Tests , Phenazines/chemistry , Protein Binding , Protein Folding , Protein Multimerization , Thiadiazines/chemistry , Triose-Phosphate Isomerase/chemistry , Triose-Phosphate Isomerase/genetics , Trypanosoma cruzi/enzymology
15.
Exp Parasitol ; 134(4): 495-503, 2013 Aug.
Article in English | MEDLINE | ID: mdl-23707345

ABSTRACT

In the present study, we obtained and characterized partially a monoclonal antibody (4H11D10B11 mAb) against triosephosphate isomerase from Taenia solium (TTPI). This antibody recognized the enzyme by both ELISA and western blot and was able to inhibit its enzymatic activity in 74%. Moreover, the antigen-binding fragments (Fabs), products of digestion of the monoclonal antibody with papain, retained almost the same inhibitory effect. We determined the binding site by ELISA; synthetic peptides containing sequences from different non-conserved regions of the TTPI were confronted to the 4H11D10B11 mAb. The epitope recognized by the monoclonal antibody was located on peptide TTPI-56 (ATPAQAQEVHKVVRDWIRKHVDAGIADKARI), and an analysis of mimotopes, obtained with the 4H11D10B11 mAb, suggests that the epitope spans the sequence WIRKHVDAGIAD, residues 193-204 of the enzyme. This epitope is located within helix 6, next to loop 6, an essential active loop during catalysis. The antibody did not recognize triosephosphate isomerase from man and pig, definitive and intermediary hosts of T. solium, respectively. Furthermore, it did not bind to the catalytic site, since kinetic analysis demonstrated that inhibition had a non-competitive profile.


Subject(s)
Antibodies, Monoclonal/immunology , Taenia solium/enzymology , Triose-Phosphate Isomerase/immunology , Amino Acid Sequence , Animals , Antibodies, Monoclonal/chemistry , Antibodies, Monoclonal/pharmacology , Epitopes/chemistry , Hybridomas , Immunoglobulin Fab Fragments/analysis , Immunoglobulin Fab Fragments/chemistry , Immunoglobulin Fab Fragments/immunology , Mice , Mice, Inbred BALB C , Molecular Sequence Data , Taenia solium/immunology , Triose-Phosphate Isomerase/antagonists & inhibitors
16.
J Enzyme Inhib Med Chem ; 28(5): 981-9, 2013 Oct.
Article in English | MEDLINE | ID: mdl-22803666

ABSTRACT

CONTEXT: Triosephosphate isomerase (TIM) is a ubiquitous enzyme that has been targeted for the discovery of small molecular weight compounds with potential use against Trypanosoma cruzi, the causative agent of Chagas disease. We have identified a new selective inhibitor chemotype of TIM from T. cruzi (TcTIM), 1,2,4-thiadiazol-5(4H)-one. OBJECTIVE: Study the mechanism of TcTIM inhibition by a 1,2,4-thiadiazol derivative. METHODS: We performed the biochemical characterization of the interaction of the 1,2,4-thiadiazol derivative with the wild-type and mutant TcTIMs, using DOSY-NMR and MS experiments. Studies of T. cruzi growth inhibition were additionally carried out. RESULTS AND CONCLUSION: At low micromolar concentrations, the compound induces highly selective irreversible inactivation of TcTIM through non-covalent binding. Our studies indicate that it interferes with the association of the two monomers of the dimeric enzyme. We also show that it inhibits T. cruzi growth in culture.


Subject(s)
Enzyme Inhibitors/pharmacology , Thiadiazoles/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanosoma cruzi/enzymology , Dose-Response Relationship, Drug , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Models, Molecular , Molecular Structure , Structure-Activity Relationship , Thiadiazoles/chemical synthesis , Thiadiazoles/chemistry , Triose-Phosphate Isomerase/metabolism , Trypanosoma cruzi/drug effects , Trypanosoma cruzi/growth & development
17.
Insect Biochem Mol Biol ; 41(6): 400-9, 2011 Jun.
Article in English | MEDLINE | ID: mdl-21396445

ABSTRACT

Triosephosphate isomerase (TIM) is an enzyme with a role in glycolysis and gluconeogenesis by catalyzing the interconversion between glyceraldehyde 3-phosphate and dihydroxyacetone phosphate. This enzyme has been used as a target in endoparasite drug development. In this work we cloned, expressed, purified and studied kinetic and structural characteristics of TIM from tick embryos, Rhipicephalus (Boophilus) microplus (BmTIM). The Km and Vmax of the recombinant BmTIM with glyceraldehyde 3-phosphate as substrate, were 0.47 mM and 6031 µmol min⁻¹ mg protein⁻¹, respectively. The resolution of the diffracted crystal was estimated to be 2.4 Å and the overall data showed that BmTIM is similar to other reported dimeric TIMs. However, we found that, in comparison to other TIMs, BmTIM has the highest content of cysteine residues (nine cysteine residues per monomer). Only two cysteines could make disulfide bonds in monomers of BmTIM. Furthermore, BmTIM was highly sensitive to the action of the thiol reagents dithionitrobenzoic acid and methyl methane thiosulfonate, suggesting that there are five cysteines exposed in each dimer and that these residues could be employed in the development of species-specific inhibitors.


Subject(s)
Embryo, Nonmammalian/enzymology , Recombinant Proteins/metabolism , Rhipicephalus/enzymology , Triose-Phosphate Isomerase/metabolism , Zygote/enzymology , Amino Acid Sequence , Animals , Catalysis , Cloning, Molecular , Crystallography, X-Ray , Cysteine/chemistry , Cysteine/metabolism , Dihydroxyacetone Phosphate/metabolism , Dimerization , Escherichia coli , Glyceraldehyde 3-Phosphate/metabolism , Humans , Kinetics , Models, Molecular , Molecular Sequence Data , Protein Conformation/drug effects , Recombinant Proteins/genetics , Rhipicephalus/embryology , Sequence Alignment , Sulfhydryl Reagents/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/genetics , Triose-Phosphate Isomerase/isolation & purification
18.
Eur J Med Chem ; 45(12): 5767-72, 2010 Dec.
Article in English | MEDLINE | ID: mdl-20889239

ABSTRACT

Triosephosphate isomerase from Trypanosoma cruzi (TcTIM), an enzyme in the glycolytic pathway that exhibits high catalytic rates of glyceraldehyde-3-phosphate- and dihydroxyacetone-phosphate-isomerization only in its dimeric form, was screened against an in-house chemical library containing nearly 230 compounds belonging to different chemotypes. After secondary screening, twenty-six compounds from eight different chemotypes were identified as screening positives. Four compounds displayed selectivity for TcTIM over TIM from Homo sapiens and, concomitantly, in vitro activity against T. cruzi.


Subject(s)
Enzyme Inhibitors/pharmacology , Small Molecule Libraries/pharmacology , Triose-Phosphate Isomerase/antagonists & inhibitors , Trypanocidal Agents/pharmacology , Trypanosoma cruzi/drug effects , Dimerization , Enzyme Inhibitors/chemical synthesis , Enzyme Inhibitors/chemistry , Models, Molecular , Molecular Structure , Parasitic Sensitivity Tests , Small Molecule Libraries/chemical synthesis , Small Molecule Libraries/chemistry , Stereoisomerism , Structure-Activity Relationship , Trypanocidal Agents/chemical synthesis , Trypanocidal Agents/chemistry , Trypanosoma cruzi/enzymology
19.
Mol Biochem Parasitol ; 157(2): 179-86, 2008 Feb.
Article in English | MEDLINE | ID: mdl-18077010

ABSTRACT

Giardia lamblia depends on glycolysis to obtain ATP, highlighting the suitability of glycolytic enzymes as targets for drug design. We studied triosephosphate isomerase from G. lamblia (GlTIM) as a potential species-specific drug target. Cysteine-reactive agents were used as probes, in order to test those regions near to cysteine residues as targets to perturb enzyme structure and activity. Methyl methanethiosulfonate (MMTS) derivatized three of the five Cys per subunit of dimeric GlTIM and induced 50% of inactivation. The 2-carboxyethyl methanethiosulfonate (MTSCE) modified four Cys and induced 97% of inactivation. Inactivation by MMTS or MTSCE did not affect secondary structure, nor induce dimer dissociation; however, Cys modification decreased thermal stability of enzyme. Inactivation and dissociation of the dimer to stable monomers were reached when four Cys were derivatized by 5,5'-dithio-bis(2-nitrobenzoic acid) (DTNB). The effects of DTNB were completely abolished when GlTIM was first treated with MMTS. The effect of thiol reagents on human TIM was also assayed; it is 180-fold less sensitive than GlTIM. Collectively, the data illustrate GlTIM as a good target for drug design.


Subject(s)
Giardia lamblia/enzymology , Protozoan Proteins/antagonists & inhibitors , Triose-Phosphate Isomerase/antagonists & inhibitors , Animals , Cysteine/metabolism , Dimerization , Dithionitrobenzoic Acid/metabolism , Enzyme Stability , Hot Temperature , Methyl Methanesulfonate/analogs & derivatives , Methyl Methanesulfonate/metabolism , Methyl Methanesulfonate/pharmacology , Models, Molecular , Protein Structure, Secondary , Triose-Phosphate Isomerase/chemistry
20.
Proteins ; 67(1): 75-83, 2007 Apr 01.
Article in English | MEDLINE | ID: mdl-17221869

ABSTRACT

Homodimeric triosephosphate isomerase (TIM) from Trypanosoma cruzi (TcTIM) and T. brucei (TbTIM) are markedly similar in amino acid sequence and three-dimensional structure. In their dimer interfaces, each monomer has a Cys15 that is surrounded by loop3 of the adjoining subunit. Perturbation of Cys15 by methylmethane thiosulfonate (MMTS) induces abolition of catalysis and structural changes. In the two TIMs, the structural arrangements of their Cys15 are almost identical. Nevertheless, the susceptibility of TcTIM to MMTS is nearly 100-fold higher than in TbTIM. To ascertain the extent to which the characteristics of the interface Cys depend on the dynamics of its own monomer or on those of the adjacent monomer, we studied MMTS action on mutants of TcTIM that had the interface residues of TbTIM, and hybrids that have only one interfacial Cys15 (C15ATcTIM-wild type TbTIM). We found that the solvent exposure of the interfacial Cys depends predominantly on the characteristics of the adjoining monomer. The maximal inhibition of activity induced by perturbation of the sole interface Cys in the C15ATcTIM-TbTIM hybrid is around 60%. Hybrids formed with C15ATcTIM monomers and catalytically inert TbTIM monomers (E168DTbTIM) were also studied. Their activity drops by nearly 50% when the only interfacial Cys is perturbed. These results in conjunction with those on C15ATcTIM-wild type TbTIM hybrid indicate that about half of the activity of each monomer depends on the integrity of each of the two Cys15-loop3 portions of the interface. This could be another reason of why TIM is an obligatory dimer.


Subject(s)
Cysteine/chemistry , Methyl Methanesulfonate/analogs & derivatives , Triose-Phosphate Isomerase/chemistry , Trypanosoma brucei brucei/enzymology , Trypanosoma cruzi/enzymology , Amino Acid Sequence , Animals , Dimerization , Kinetics , Methyl Methanesulfonate/chemistry , Methyl Methanesulfonate/pharmacology , Mutagenesis, Site-Directed , Protein Interaction Mapping/methods , Protein Structure, Quaternary , Triose-Phosphate Isomerase/antagonists & inhibitors , Triose-Phosphate Isomerase/genetics , Triose-Phosphate Isomerase/metabolism
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