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1.
Polymers (Basel) ; 16(11)2024 May 21.
Artigo em Inglês | MEDLINE | ID: mdl-38891397

RESUMO

An experimental device fixed with a laser displacement sensor was assembled to investigate the rebound behaviors and damping mechanism of rubber balls prepared with ethylene-propylene-diene monomer (EPDM)/chlorinated butyl rubber (CIIR) blends. The result showed that a prediction model was proposed to characterize the damping capacity by using the rebound height of the rubber balls. The lower rebound height corresponded to better damping capacity. A modified equation relating to the rebound height has been obtained from the theoretical derivation on the basis of the dynamic mechanical analysis, showing that the rebound height was affected by the deformation frequency, the external excitation, and the nature of rubber blends. Furthermore, the energy dissipation rate (EDR), defined by the ratio of the height loss to the rebound time, was proposed to further characterize the damping capacity. The EDR value was shown to be highest for the pure CIIR and lowest for the pure EPDM, exhibiting a decreasing trend with the increase in EPDM content in the rubber blends. It can be expected that the damping capacity of the EPDM/CIIR blends decreases with the decrease in external excitation, the conclusion of which plays a key role in the formulation design of viscoelastic damping rubber materials.

2.
Int J Biometeorol ; 2024 Jun 24.
Artigo em Inglês | MEDLINE | ID: mdl-38913080

RESUMO

The objective of this study is to explore how changes in weather contribute to an increase in hospital admissions for stroke in summer. We collected 96,509 cases of stroke hospitalization data in Tianjin from 2016 to 2022 summer, along with corresponding meteorological data. The generalized additive model and distributed lag nonlinear model were used to analyze the lag and cumulative effects of temperature on stroke hospitalization. The research results show both the cold effect and the heat effect in summer would increase the risk of hospitalization. The effect of daily maximum temperature on stroke hospitalization was immediate when the temperature was higher, and delayed when the temperature was lower. However, the risk of stroke hospitalization increased more significantly with increasing temperature than with decreasing temperature. In the presence of one or more of the following three weather changes: sharp temperature increase, sharp temperature decrease, continuous high temperature, the daily number of stroke inpatients were higher than the average in the same period. 83% of the Inpatient-heavy events within the study period were caused by a combination of dramatic temperature changes and continuous high temperatures. In 48% of Inpatient-heavy events, continuous high temperature weather above 30℃ for at least 4 consecutive days were observed. And 55% of high temperature weather was accompanied by high humidity. When the daily relative humidity was greater than 70% and the daily maximum temperature was between 26 and 28℃ or more than 34℃, or the daily maximum temperature changes over 10℃ within 48 h, the number of daily inpatients was more than 1.2 times of the average daily inpatients. More attention should be paid to the combined effects of continuous high temperature and sudden temperature changes in summer stroke prevention.

3.
Sci Total Environ ; 858(Pt 3): 159881, 2023 Feb 01.
Artigo em Inglês | MEDLINE | ID: mdl-36334675

RESUMO

A comprehensive set of observations were collected along a sea-coast-inland area. According to these observations, the planetary boundary layer heights (PBLH) during winter and summer for sampling locations in sea, coast, and inland areas were 737 m, 483 m and 372 m, and 450 m, 645 m and 646 m, respectively. Little seasonal difference was observed for the daily variation of sensible heat flux over the sea, with the maximum of 55 W/m2 at 12:00 in winter and 27 W/m2 at 13:00 in summer. The duration of sea breeze was ∼10 h in summer and only 3 h in winter, extended to inland area ∼ 50 km and upward 920 m vertically. PM2.5 at coastal area was about 5 µg/m3 higher than inland during summer afternoon. Over the sea, PM2.5 mainly concentrated below 200 m in winter, increased with height at night and decreased with height in the morning below 300 m in summer. A typical land-sea breeze episode was analyzed with observed and simulated result. According to the observed data, the sea breeze extended to inland ∼50 km and upward 300 m vertically. From the simulating result, there was a clear temperature gradient between sea and land from surface to 400 m, when influenced by the sea breeze, the wind and temperature profiles showed different characteristics, and forming a high concentration center of PM2.5 at 300 m. These results provide insights into the structure of land-sea planetary boundary layer, and provide support for the prediction of heavy pollution episode.

4.
Opt Express ; 30(4): 5167-5176, 2022 Feb 14.
Artigo em Inglês | MEDLINE | ID: mdl-35209486

RESUMO

Parity-time symmetric Bragg gratings produce unidirectional reflection around the exceptional point. We propose and explore directional coupling of gain and loss modulated waveguide Bragg gratings operating at around 880 nm with long-range surface plasmon polaritons. Step-in-width modulation of a Ag stripe supporting long-range plasmons combined with a periodic modulation of the cladding were used to balance the real and imaginary index perturbation of the gratings. IR140 dye molecules in solvent forms a portion of the uppercladding, providing gain under optical pumping. We investigate directional coupling between a pair of parity-time symmetric waveguide Bragg gratings operating near their exceptional point, arranged in various configurations - duplicate, duplicate-shifted and duplicate-flipped. We also investigate coupling to a bus waveguide and to a conventional waveguide Bragg grating. Unidirectional multi-wavelength reflection and coupled supermode conversion are predicted.

5.
Plant Physiol Biochem ; 173: 33-45, 2022 Jan 15.
Artigo em Inglês | MEDLINE | ID: mdl-35093693

RESUMO

O-methyltransferases (OMTs) are an important group of enzymes involved in the methylation of various secondary metabolites, including flavonoids. However, the features and functions of OMTs have not been comprehensively studied in grape (Vitis vinifera), a rich source of methylated flavonoids. Here, 47 OMT members were identified in grape genome. They were unevenly distributed on grape chromosomes and some genes were tandem duplicated, indicating the role of duplication processes in the expansion of this gene family. Based on the phylogenetic relationship, these OMTs were clustered into CCoAOMT and COMT subclades, which were further supported by the results of conserved motif and gene structure analysis. Correlation analysis revealed that three members (VvCCoAOMT1, VvCCoAOMT4, and VvCOMT1) were potentially involved in the synthesis of most methylated flavonoids in the berry skins. Expression profiling based on RNA-seq data and qRT-PCR experiments indicated that VvCCoAOMT1 and VvCCoAOMT4 had specific and high expression in berry skins, and responded to abscisic acid and high temperature treatments; and that VvCOMT1 expression was significantly induced during berry development and UVC treatment. Cis-regulatory element analysis suggested important roles of OMTs in growth, development, and defense against stresses. We further demonstrated the transcriptional regulation of VvCCoAOMT4 by VvMYBA1, a master regulator of grape berry anthocyanin, and verified the protein localization of VvCCoAOMT4 in membrane and nucleus. These findings facilitate a better understanding of the characteristics of OMT gene family, especially of the potential members involved in the formation of O-methylated flavonoids in grape.


Assuntos
Vitis , Flavonoides , Frutas/genética , Frutas/metabolismo , Regulação da Expressão Gênica de Plantas , Metiltransferases/genética , Filogenia , Proteínas de Plantas/genética , Proteínas de Plantas/metabolismo , Vitis/genética , Vitis/metabolismo
6.
Huan Jing Ke Xue ; 42(11): 5143-5151, 2021 Nov 08.
Artigo em Chinês | MEDLINE | ID: mdl-34708953

RESUMO

Air humidity is a key meteorological factor in regulating visibility changes and haze episodes. Based on multi-year historical data of PM2.5 mass concentration, visibility, relative humidity(RH), and specific humidity(q) during winter in Tianjin, the impact of air humidity on PM2.5 mass concentration and visibility was investigated. Between 2015 and 2020, the PM2.5 mass concentration showed an overall decline of 28.0%. The frequency of visibility above 10 km significantly increased between 2015 and 2018, indicating an improvement in visibility during this period. However, the visibility deteriorated again in the winter of 2019 and 2020, with a decreased frequency of visibility above 10 km. Specifically, the mean RH in January and February in 2020 of Tianjin reached 63% and 67%, respectively, which were higher than the historical 30-year average for the same period. The frequency of extremely low visibility(lower than 2 km) rebounded to a level equivalent to that during the winter of 2016. The enhanced air humidity visually obscured the reduction effect of PM2.5. For Tianjin, the external sources of water vapor are southwestern and eastern transport. Particularly, water vapor transported from eastern Bohai Bay(59%) is significantly greater than that from southwestern direction(25%). However, the eastern air mass is generally clean, hence, although the condensed water may increase the PM2.5 mass concentration in the humid air, the eastern air mass affects visibility to a greater extent. On the other hand, the haze episodes during winter frequently occurred when the southwestern wind dominated and specific humidity was greater than 2.0 g·kg-1, with a frequency of 83.6%. In a short period of time, the variation of specific humidity is less significant than RH, therefore, the relationship between specific humidity and PM2.5 mass concentration or air quality can be utilized to predict the occurrence of haze episodes and pollution during winter. When the average RH is higher than 80% or the mean specific humidity is greater than 3.0 g·kg-1, the frequency of PM2.5 mass concentration greater than 75 µg·m-3 is 78% and 80%, respectively. For the air quality forecast during winter, weather conditions with specific humidity greater than 3.0 g·kg-1 should be carefully monitored.


Assuntos
Poluentes Atmosféricos , Poluição do Ar , Poluentes Atmosféricos/análise , Poluição do Ar/análise , China , Monitoramento Ambiental , Umidade , Material Particulado/análise , Estações do Ano
7.
Sheng Wu Gong Cheng Xue Bao ; 37(5): 1737-1747, 2021 May 25.
Artigo em Chinês | MEDLINE | ID: mdl-34085452

RESUMO

14- to 16-membered macrolide antibiotics (MA) are clinically important anti-infective drugs. With the rapid emergence of bacterial resistance, there is an urgent need to develop novel MA to counter drug-resistant bacteria. The targeted optimization of MA can be guided by analyzing the interaction between the MA and its ribosomal targets, and the desired MA derivatives can be obtained efficiently when combining with the rapidly developed metabolic engineering approaches. In the past 30 years, metabolic engineering approaches have shown great advantages in engineering the biosynthesis of MA to create new derivatives and to improve their production. These metabolic engineering approaches include modification of the structural domains of the polyketide synthase (PKS) and post-PKS modification enzymes as well as combinatorial biosynthesis. In addition, the R&D (including the evaluation of its antimicrobial activities and the optimization through metabolic engineering) of carrimycin, a new 16-membered macrolide drug, are described in details in this review.


Assuntos
Macrolídeos , Engenharia Metabólica , Antibacterianos , Bactérias/genética , Policetídeo Sintases
8.
Appl Opt ; 59(26): 7734-7744, 2020 Sep 10.
Artigo em Inglês | MEDLINE | ID: mdl-32976443

RESUMO

Leaf chlorophyll content (LCC) is a key indicator of a plant's physiological status. Fast and non-destructive monitoring of chlorophyll content in plants through remote sensing is very important for accurate diagnosis and assessment of plant growth. Through the use of laser-induced fluorescence (LIF) technology, this study aims to compare the predictive ability of different single fluorescence characteristic and fluorescence characteristic combinations at various viewing zenith angles (VZAs) combined with multivariate analysis algorithms, such as principal component analysis (PCA) and support vector machine (SVM), for estimating the LCC of plants. The SVM models of LCC estimation were proposed, and fluorescence characteristics-fluorescence peak (FP), fluorescence ratio (FR), PCA, and first-derivative (FD) parameter-and fluorescence characteristic combinations (FP+FR, FP+FD, FR+FD, FP+FR+FD) were used as input variables for the models. Experimental results demonstrated that the effect of single fluorescence characteristics on the predictive performance of SVM models was: FR>FD>FP>PCA. Compared with other models, 0° SVM was the optimal model for estimating LCC by higher R2. The fluorescence spectra and FD spectra observed at 0° and 30° were superior to those observed at 15°, 45°, and 60°. Thus, appropriate VZA must also be considered, as it can improve the accuracy of LCC monitoring. In addition, compared with single fluorescence characteristic, the FP+FR+FD was the optimal combination of fluorescence characteristics to estimate the LCC for the SVM model by higher R2, indicating better predictive performance. The experimental results show that the combination of LIF technology and multivariate analysis can be effectively used for LCC monitoring and has broad development prospects.


Assuntos
Clorofila/análise , Folhas de Planta/química , Tecnologia de Sensoriamento Remoto , Espectrometria de Fluorescência/métodos , Análise Espectral
9.
Environ Sci Pollut Res Int ; 27(21): 26750-26762, 2020 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-32382903

RESUMO

The aerosol samples of water-soluble inorganic ions (WSIs), including SO42-, NO3-, NH4+, Cl-, K+, Na+, Ca2+, and Mg2+ in size-segregated particulate matter (PM), were collected by an Anderson sampler (with 8 nominal cut-sizes ranged from 0.43 to 9.0 µm) in urban Tianjin during 2013-2014. The results showed that particulate matters in the fine mode (PM2.1, Dp < 2.1 µm) comprised large part of mass concentrations of aerosols, and the water-soluble ionic species in the fine mode were 47.07 ± 14.29 µg m-3 (spring), 67.87 ± 28.74 µg m-3 (summer), 86.60 ± 48.53 µg m-3 (autumn), and 104.16 ± 51.76 µg m-3 (winter), respectively, which accounted for 59.5%, 63.3%, 71.9%, and 71.4% of the PM2.1 mass concentrations. Secondary pollutants of SO42-, NO3-, and NH4+ (SNA) were the dominant contributors of WSIs, which showed a bimodal size distribution in each season, with the larger peak appeared in the size fraction of 0.65-1.1 µm and the smaller one in 3.3-5.8 µm fraction. SNA concentrations in lightly polluted days (LPD) and heavily polluted days (HPD) were observably higher than non-polluted days (NPD), especially in the fine mode, with the peak diameter moving from 0.43-0.65 µm on NPD to 0.65-1.1 µm on LPD and HPD. The correlation analysis between NH4+, NO3-, and SO42- suggested that almost all SO42- and NO3- for fine particles had been completely neutralized by NH4+, and primarily existed in the forms of (NH4)2SO4 and NH4NO3. The sulfur oxidation ratio (SOR) and nitrogen oxidation ratio (NOR) on LPD and HPD in fine mode were observably higher than those on NPD, especially in the range of 0.65-1.1 µm and 1.1-2.1 µm. Furthermore, SOR and NOR values in the size fraction of 0.43-3.3 µm increase as the RH elevated, especially in 0.43-2.1 µm, where RH was significantly positive correlated with SOR and NOR, indicating the significant contributions of heterogeneous processes to the secondary formation of SO42- and NO3-. These results suggested an enhanced formation ability of secondary pollutants under high RH in the coast city. Therefore, controlling the precursors of SNA, such as SO2 and NOx, would be more effective to reduce the fine particulate pollution in the coast megacity of Tianjin.


Assuntos
Poluentes Atmosféricos/análise , Água , Aerossóis/análise , China , Monitoramento Ambiental , Íons/análise , Tamanho da Partícula , Material Particulado/análise , Estações do Ano , Solubilidade
10.
Appl Environ Microbiol ; 86(10)2020 05 05.
Artigo em Inglês | MEDLINE | ID: mdl-32198173

RESUMO

Fnr is a transcriptional regulator that controls the expression of a variety of genes in response to oxygen limitation in bacteria. Genome sequencing revealed four genes (fnr1, fnr3, fnr5, and fnr7) coding for Fnr proteins in Paenibacillus polymyxa WLY78. Fnr1 and Fnr3 showed more similarity to each other than to Fnr5 and Fnr7. Also, Fnr1 and Fnr3 exhibited high similarity with Bacillus cereus Fnr and Bacillus subtilis Fnr in sequence and structures. Both the aerobically purified His-tagged Fnr1 and His-tagged Fnr3 in Escherichia coli could bind to the specific DNA promoter. Deletion analysis showed that the four fnr genes, especially fnr1 and fnr3, have significant impacts on growth and nitrogenase activity. Single deletion of fnr1 or fnr3 led to a 50% reduction in nitrogenase activity, and double deletion of fnr1 and fnr3 resulted to a 90% reduction in activity. Genome-wide transcription analysis showed that Fnr1 and Fnr3 indirectly activated expression of nif (nitrogen fixation) genes and Fe transport genes under anaerobic conditions. Fnr1 and Fnr3 inhibited expression of the genes involved in the aerobic respiratory chain and activated expression of genes responsible for anaerobic electron acceptor genes.IMPORTANCE The members of the nitrogen-fixing Paenibacillus spp. have great potential to be used as a bacterial fertilizer in agriculture. However, the functions of the fnr gene(s) in nitrogen fixation and other metabolisms in Paenibacillus spp. are not known. Here, we found that in P. polymyxa WLY78, Fnr1 and Fnr3 were responsible for regulation of numerous genes in response to changes in oxygen levels, but Fnr5 and Fnr7 exhibited little effect. Fnr1 and Fnr3 indirectly or directly regulated many types of important metabolism, such as nitrogen fixation, Fe uptake, respiration, and electron transport. This study not only reveals the function of the fnr genes of P. polymyxa WLY78 in nitrogen fixation and other metabolisms but also will provide insight into the evolution and regulatory mechanisms of fnr in Paenibacillus.


Assuntos
Proteínas de Bactérias/genética , Paenibacillus polymyxa/genética , Paenibacillus polymyxa/metabolismo , Anaerobiose , Proteínas de Bactérias/metabolismo , Mutação , Fixação de Nitrogênio , Nitrogenase/metabolismo , Paenibacillus polymyxa/enzimologia , Paenibacillus polymyxa/crescimento & desenvolvimento
11.
ACS Synth Biol ; 8(8): 1766-1775, 2019 08 16.
Artigo em Inglês | MEDLINE | ID: mdl-31117360

RESUMO

Biological nitrogen fixation, a process unique to diazotrophic prokaryote, is catalyzed by the nitrogenase complex. There has been a long-standing interest in reconstituting a nitrogenase biosynthetic pathway in a eukaryotic host with the final aim of developing N2-fixing cereal crops. In this study, we report that a nitrogenase biosynthetic pathway (∼38 kb containing 15 genes) was assembled in two individual one-step methods via in vivo assembly and integrated at δ and HO sites in Saccharomyces cerevisiae chromosome. Of the 15 genes, 11 genes (nifB, nifH, nifD, nifK, nifE, nifN, nifX, hesA, nifV, groES, groEL) were from Paenibacillus polymyxa WLY78 and 4 genes (nifS, nifU, nifF, nifJ) were from Klebsiella oxytoca. The 15-gene nitrogenase biosynthetic pathway was correctly assembled and transcribed in the recombinant S. cerevisiae. The NifDK tetramer with an identical molecular weight as that of P. polymyxa was formed in yeast and the expressed NifH exhibited the activity of Fe protein. This study demonstrates that it will be possible to produce active nitrogenase in eukaryotic hosts.


Assuntos
Nitrogenase/metabolismo , Proteínas de Saccharomyces cerevisiae/metabolismo , Saccharomyces cerevisiae/enzimologia , Saccharomyces cerevisiae/metabolismo , Vias Biossintéticas/genética , Vias Biossintéticas/fisiologia , Cromossomos Bacterianos/genética , Cromossomos Fúngicos/genética , Peso Molecular , Fixação de Nitrogênio/genética , Fixação de Nitrogênio/fisiologia , Nitrogenase/genética , Saccharomyces cerevisiae/genética , Proteínas de Saccharomyces cerevisiae/genética
12.
Sci Total Environ ; 616-617: 135-146, 2018 Mar.
Artigo em Inglês | MEDLINE | ID: mdl-29112837

RESUMO

To clarify the rapid formation and evolutionary mechanisms of an extremely severe and persistent haze and fog (HF) episode that occurred in central-eastern China from Dec 20 to 25, 2015, a novel campaign was conducted and vertical profiles of wind, temperature, light extinction coefficient (LEC) and PM2.5 concentration were used to analyze the rapid formation and evolutionary mechanisms of this HF episode. The substantial downward transportation of regional pollution from high layers and stagnant weather conditions favorable for the local pollution accumulation were the two main causes of the rapid increase in pollutant concentration. Southwest wind speeds of 4m/s between 300 and 600m and obvious downward flows were observed, whereas the southwest wind speeds were low below 300m, and strong temperature inversion with intensity of 4.5°C/100m expanded vertically to a height of 600m. Two peaks of PM2.5 concentration were observed at 200 and 700m, corresponding to 235 and 215µg/m3, respectively. The frequent change in wind direction and wind speeds resulted in the fluctuation of PM2.5 concentration. The turbulence within lower layers of the troposphere was enhanced by easterly and northerly winds which decreased the pollution level; however, the strength and stretching height of the winds were insufficient to fully clear the air of pollutants. The PM2.5 concentration revealed 2-high concentration layers in the vertical direction. The maximum concentration layer was below 100m, while the second high-concentration layer was at 400m.

13.
Int J Mol Sci ; 18(7)2017 Jun 29.
Artigo em Inglês | MEDLINE | ID: mdl-28661431

RESUMO

Phosphorus (P) limits the production of maize, one of the major food crops in China. Phosphate-solubilizing bacteria (PSB) have the capacity to solubilize phosphate complexes into plant absorbable and utilizable forms by the process of acidification, chelation, and exchange reactions. In this study, six bacteria, including one Paenibacillus sp. B1 strain, four Pseudomonas sp. strains (B10, B14, SX1, and SX2) and one Sphingobium sp. SX14 strain, were those isolated from the maize rhizosphere and identified based on their 16S rRNA sequences. All strains could solubilize inorganic P (Ca3(PO4)2, FePO4 and AlPO4), and only B1 and B10 organic P (lecithin). All strains, except of SX1, produced IAA, and SX14 and B1 showed the highest level. B1 incited the highest increase in root length and the second increase in shoot and total dry weight, shoot length, and total P and nitrogen (N), along with increased root length. In addition, by confocal laser scanning microscopy (CLSM), we found that green fluorescent protein (GFP)-labeled B1 mainly colonized root surfaces and in epidermal and cortical tissue. Importantly, B1 can survive through forming spores under adverse conditions and prolong quality guarantee period of bio-fertilizer. Therefore, it can act as a good substitute for bio-fertilizer to promote agricultural sustainability.


Assuntos
Bactérias/metabolismo , Fosfatos/metabolismo , Microbiologia do Solo , Zea mays/crescimento & desenvolvimento , Zea mays/metabolismo , Zea mays/microbiologia , Agricultura , Bactérias/classificação , Bactérias/genética , Bactérias/isolamento & purificação , China , DNA Bacteriano/genética , Fertilizantes , Genes Bacterianos/genética , Proteínas de Fluorescência Verde , Concentração de Íons de Hidrogênio , Microscopia Confocal , Nitrogênio/metabolismo , Paenibacillus/genética , Paenibacillus/isolamento & purificação , Paenibacillus/metabolismo , Fosfatos/química , Fósforo/química , Fósforo/metabolismo , Filogenia , Células Vegetais , Raízes de Plantas/crescimento & desenvolvimento , Brotos de Planta/crescimento & desenvolvimento , Pseudomonas/genética , Pseudomonas/isolamento & purificação , Pseudomonas/metabolismo , RNA Ribossômico 16S/genética , Rizosfera , Solo/química , Solubilidade , Sphingomonadaceae/genética , Sphingomonadaceae/isolamento & purificação , Sphingomonadaceae/metabolismo , Esporos Bacterianos
14.
PLoS One ; 12(1): e0169980, 2017.
Artigo em Inglês | MEDLINE | ID: mdl-28076417

RESUMO

Paenibacillus polymyxa WLY78 is a nitrogen fixer and it can be potentially applied to biofertilizer in agriculture. In this study, P. polymyxa WLY78 is labelled with gfp gene. The GFP-labelled P. polymyxa WLY78 is used to inoculate wheat, maize and cucumber seedlings grown in the gnotobiotic system and in soil, respectively. Observation by confocal laser scanning microscope reveals that the GFP-labeled bacterial cells are mainly located on the root surface and epidermis of wheat, and only a few cells are present within cortical cells. In maize and cucumber seedlings, bacterial cells were colonized in epidermal and cortical cells, intercellular spaces and vascular system of root, stem and leaf tissue interiors besides on root surfaces. Higher densities of the bacterial cells in roots, stems and leaves indicated that P. polymyxa WLY78 cells could migrate from roots to stems and leaves of maize and cucumber. This study will provide insight into interaction between P. polymyxa WLY78 and host cells.


Assuntos
Cucumis sativus/microbiologia , Paenibacillus polymyxa/crescimento & desenvolvimento , Triticum/microbiologia , Zea mays/microbiologia , Proteínas de Fluorescência Verde/genética , Organismos Geneticamente Modificados , Paenibacillus polymyxa/genética , Paenibacillus polymyxa/patogenicidade , Doenças das Plantas/microbiologia , Folhas de Planta/microbiologia , Raízes de Plantas/microbiologia , Caules de Planta/microbiologia , Plântula/microbiologia , Microbiologia do Solo
15.
BMC Microbiol ; 16: 25, 2016 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-26931570

RESUMO

BACKGROUND: Diazotrophic (nitrogen-fixing) Gram-positive and endospore-formed Paenibacillus spp. have potential uses as a bacterial fertilizer in agriculture. The transcriptional analysis of nitrogen fixation in Paenibacillus is lacking, although regulation mechanisms of nitrogen fixation have been well studied in Gram-negative diazotrophs. RESULTS: Here we report a global transcriptional profiling analysis of nitrogen fixation in Paenibacillus sp. WLY78 cultured under N2-fixing condition (without O2 and NH4(+)) and non-N2-fixing condition (air and 100 mM NH4(+)). The nif (nitrogen fixation) gene operon composed of 9 genes (nifBHDKENXhesAnifV) in this bacterium was significantly up-regulated in N2-fixing condition compared to non-N2-fixing condition, indicating that nif gene transcription is strictly controlled by NH4(+) and O2. qRT-PCR confirmed that these nif genes were differently expressed. Non-nif genes specifically required in nitrogen fixation, such as mod, feoAB and cys encoding transporters of Mo, Fe and S atoms, were coordinately transcribed with nif genes in N2-fixing condition. The transcript abundance of suf operon specific for synthesis of Fe-S cluster was up-regulated in N2-fixing condition, suggesting that Sul system, which takes place of nifS and nifU, plays important role in the synthesis of nitrogenase. We discover potential specific electron transporters which might provide electron from Fe protein to MoFe protein of nitrogenase. The glnR whose predicted protein might mediate nif transcription regulation by NH4(+) is significantly up-regulated in N2-fixing condition. The transcription levels of nitrogen metabolism and anaerobic respiration were also analyzed. CONCLUSIONS: The nif gene operon (nifBHDKENXhesAnifV) in Paenibacillus sp. WLY78 is significantly up-regulated in N2-fixing condition compared to non-N2-fixing condition. Non-nif genes specifically required in nitrogen fixation were also significantly up-regulated in N2-fixing condition. Fur and Fnr which are involved in anaerobic regulation and GlnR which might mediate nif gene transcription regulation by NH4(+) were significantly up-regulated in N2-fixing condition. This study provides valuable insights into nitrogen fixation process and regulation in Gram-positive firmicutes.


Assuntos
Genoma Bacteriano , Fixação de Nitrogênio , Paenibacillus/genética , Proteínas de Bactérias/genética , Proteínas de Bactérias/metabolismo , Perfilação da Expressão Gênica , Regulação Bacteriana da Expressão Gênica , Óperon , Paenibacillus/fisiologia
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