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1.
Braz J Biol ; 84: e285978, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-39292141

RESUMO

The number of food products with genetically modified (GM) crops on the global market has increased due to advancements in genetic engineering technology. Legislation regulating the labeling and use of GM crops has increased considerably worldwide to provide consumers with health and safety assurance. It is still unclear whether genetically modified organisms (GMOs) are present in the food market of the Kingdom of Saudi Arabia due to a lack of scientific studies. This work was planned to detect GM rice and GM potatoes in the Saudi food market. One hundred non-labeled rice and rice product samples and 50 potato and potato samples were collected randomly from different market sites of Makkah, Riyadh and Jeddah during 2022-2023. The cetyl trimethyl ammonium bromide (CTAB) method was used to extract DNA. Viviants DNA extraction kit was used to extract DNA from rice starch and potato chips. To find GMOs in samples, CMOScreen 35S and NOS test kits were utilized. DNA-based qualitative and quantitative approaches were used to screen targets for PCR detection of GM rice sequences. The results indicated that 32 (32%) rice samples were positive for CaMV 35S promoter, while no positive result was detected for the NOS terminator. Besides, 30% of potato samples were positive for the CaMV 35S promoter, and the same samples were positive for the presence of the Cry V gene. It could be concluded that there were GM rice and potatoes in the Kingdom of Saudi Arabia's food markets. Establishing strong regulations and certified laboratories to monitor genetically modified foods (GMF) or crops in the Saudi market is recommended.


Assuntos
Oryza , Plantas Geneticamente Modificadas , Solanum tuberosum , Solanum tuberosum/genética , Oryza/genética , Arábia Saudita , Plantas Geneticamente Modificadas/genética , Alimentos Geneticamente Modificados , DNA de Plantas/genética , DNA de Plantas/análise , Reação em Cadeia da Polimerase
2.
Sci Rep ; 14(1): 19968, 2024 08 28.
Artigo em Inglês | MEDLINE | ID: mdl-39198560

RESUMO

Orange II, an azo dye used in textile and leather industries, is toxic and contributes to reducing dissolved oxygen in water. In this sense, agri-food waste adsorbents offer efficient, cost-effective dye removal. In this study, potato surpluses were evaluated as adsorbents for the removal of Orange II at 22 °C and pH values between 4 and 9. The adsorbents were characterized by their morphology, elemental composition, infrared spectra, and point of zero charge. Adsorption isotherms were analysed using Langmuir and Freundlich models, revealing that the Langmuir equation (0.933 < r2 > 0.882) better described the adsorption process compared to the Freundlich model (0.909 < r2 > 0.852). The maximum adsorption capacity at pH 4 was 1.1 and 2.3 times higher than at pH 7 and 9, respectively. This increased capacity at pH 4 was due to favourable electrostatic interactions between the cationic adsorbent surface and the anionic dye. A kinetic model was developed to understand the adsorption dynamics of Orange II, demonstrating high accuracy with coefficients of determination (r2) exceeding 0.99 across various pH values. The predictions of the kinetic model aligned well with the Langmuir isotherm results, indicating a strong theoretical foundation. The critical contact time required to achieve the minimum adsorbent concentration necessary for meeting a discharge limit of 14.7 mg L-1 was determined using both the Langmuir and kinetic models. Simulation profiles showed that when the adsorbent concentration was increased from 12 to 40 g L-1, the contact time necessary to achieve the discharge limit decreased from 26 to 3.35 h, highlighting the trade-off between contact time and cost. This study offers a cost-effective solution for wastewater treatment and presents a robust model for optimizing batch adsorption processes, marking a significant advancement in using potato surpluses for dye removal.


Assuntos
Compostos Azo , Benzenossulfonatos , Solanum tuberosum , Poluentes Químicos da Água , Purificação da Água , Solanum tuberosum/química , Compostos Azo/química , Adsorção , Concentração de Íons de Hidrogênio , Cinética , Poluentes Químicos da Água/química , Poluentes Químicos da Água/isolamento & purificação , Benzenossulfonatos/química , Purificação da Água/métodos , Corantes/química
3.
Food Chem ; 460(Pt 1): 140478, 2024 Dec 01.
Artigo em Inglês | MEDLINE | ID: mdl-39032302

RESUMO

Southern Chile native potatoes are an interesting raw material to produce novel snacks like colored potato chips. These novel products should be comprehensively evaluated for the presence of undesirable compounds such as acrylamide, 5-hydroxymethylfurfural and furan, the main neoformed contaminants in starchy rich fried foods. This study evaluated the neoformed contaminant levels and oil content on chips made from eleven Chilean potato accessions and compared them with commercial samples. The neoformed contaminant contents were related to Maillard reaction precursor levels (reducing sugars and asparagine) and secondary metabolites (phenolic compounds and carotenoids). Neoformed contaminants correlated well among them and were weakly correlated with reducing sugars and asparagine. Acrylamide level in native potato chips ranged from 738.2 to 1998.6 µg kg-1 while from 592.6 to 2390.5 µg kg-1 in commercial samples. Thus, there is need to implement neoformed contaminant mitigation strategies at different steps of the production chain of colored potato chips.


Assuntos
Acrilamida , Culinária , Contaminação de Alimentos , Reação de Maillard , Solanum tuberosum , Solanum tuberosum/química , Solanum tuberosum/metabolismo , Contaminação de Alimentos/análise , Acrilamida/análise , Acrilamida/metabolismo , Chile , Temperatura Alta , Metabolismo Secundário , Fenóis/metabolismo , Fenóis/análise , Fenóis/química , Tubérculos/química , Tubérculos/metabolismo , Carotenoides/análise , Carotenoides/metabolismo , Carotenoides/química , Furaldeído/análogos & derivados
4.
Neotrop Entomol ; 53(5): 1137-1148, 2024 Oct.
Artigo em Inglês | MEDLINE | ID: mdl-39026134

RESUMO

Herbivorous insects depend on the host plant to optimize their overall reproductive success, and balanced fertilization may alter the plant's quality against herbivory. Life history traits of the Liriomyza trifolii (Burgess) were determined under laboratory conditions using either unfertilized and fertilized plants of bean [Phaseolus vulgaris L. (Fabaceae)], chrysanthemum [Chrysanthemum × morifolium (Asteraceae)], potato [Solanum tuberosum (Solanaceae)], bell pepper [Capsicum annuum (Solanaceae)], and tomato [Solanum lycopersicum (Solanaceae)]. Results indicated that L. trifolii completed development on all studied unfertilized and fertilized plants. Nevertheless, a higher performance of the leaf miner was observed on bean and bell pepper plants compared to the other plants. Furthermore, there was an interaction of the host plant and fertilization with Calcium Aria or Sitam negatively affecting the fitness-related traits of the leaf miner. Application of these fertilizers resulted in delayed immature development of L. trifolii, decreased survival rate, and reduced adult longevity and fecundity. The activity of cinnamyl alcohol dehydrogenase (CAD), peroxidase (POD), polyphenol oxidase (PPO), and phenylalanine ammonia-lyase (PAL) enzymes, as well as phenolic, flavonoid, and lignin content were higher in Calcium Aria + Sitam fertilized plants, intermediate in Calcium Aria and Sitam treated plants, and the lower in unfertilized plants. The development and survival of L. trifolii on different host plants, considering fertilization options, become important for deploying cultural control practices against this important pest species.


Assuntos
Dípteros , Herbivoria , Animais , Dípteros/fisiologia , Phaseolus , Chrysanthemum , Fertilizantes , Características de História de Vida , Capsicum , Larva/crescimento & desenvolvimento , Solanum tuberosum , Feminino , Solanum lycopersicum , Longevidade , Fertilidade , Masculino
5.
G3 (Bethesda) ; 14(9)2024 Sep 04.
Artigo em Inglês | MEDLINE | ID: mdl-39058924

RESUMO

Potato (Solanum tuberosum) is an essential crop for food security and is ranked as the third most important crop worldwide for human consumption. The Diacol Capiro cultivar holds the dominant position in Colombian cultivation, primarily catering to the food processing industry. This highly heterozygous, autotetraploid cultivar belongs to the Andigenum group and it stands out for its adaptation to a wide variety of environments spanning altitudes from 1,800 to 3,200 meters above sea level. Here, a chromosome-scale assembly, referred to as DC, is presented for this cultivar. The assembly was generated by combining circular consensus sequencing with proximity ligation Hi-C for the scaffolding and represents 2.369 Gb with 48 pseudochromosomes covering 2,091 Gb and an anchor rate of 88.26%. The reference genome metrics, including an N50 of 50.5 Mb, a BUSCO (Benchmarking Universal Single-Copy Orthologue) score of 99.38%, and an Long Terminal Repeat Assembly Index score of 13.53, collectively signal the achieved high assembly quality. A comprehensive annotation yielded a total of 154,114 genes, and the associated BUSCO score of 95.78% for the annotated sequences attests to their completeness. The number of predicted NLR (Nucleotide-Binding and Leucine-Rich-Repeat genes) was 2107 with a large representation of NBARC (for nucleotide binding domain shared by Apaf-1, certain R gene products, and CED-4) containing domains (99.85%). Further comparative analysis of the proposed annotation-based assembly with high-quality known potato genomes, showed a similar genome metrics with differences in total gene numbers related to the ploidy status. The genome assembly and annotation of DC presented in this study represent a valuable asset for comprehending potato genetics. This resource aids in targeted breeding initiatives and contributes to the creation of enhanced, resilient, and more productive potato varieties, particularly beneficial for countries in Latin America.


Assuntos
Cromossomos de Plantas , Genoma de Planta , Anotação de Sequência Molecular , Solanum tuberosum , Tetraploidia , Solanum tuberosum/genética , Cromossomos de Plantas/genética , Genômica/métodos , Mapeamento Cromossômico
6.
Sci Rep ; 14(1): 13915, 2024 06 17.
Artigo em Inglês | MEDLINE | ID: mdl-38886543

RESUMO

The potato cyst nematode Globodera rostochiensis originates from the Andean Mountain region in South America and has unintentionally been introduced to all inhabited continents. Several studies have examined the population genetic structure of this pest in various countries by using microsatellite markers. However, merging microsatellite data produced from different laboratories is challenging and can introduce uncertainty when interpreting the results. To overcome this challenge and to explore invasion routes of this pest, we have genotyped 22 G. rostochiensis populations from all continents. Within populations, the highest genetic diversity was observed in the South American populations, the European populations showed an intermediate level of genetic diversity and the remaining populations were the less diverse. This confirmed pre-existing knowledge such as a first introduction event from South America to Europe, but the less diverse populations could originate either from South America or from Europe. At the continental scale, STRUCTURE genetic clustering output indicated that North America and Asia have experienced at least two introduction events. Comparing different evolutionary scenarios, the Approximate Bayesian Computation analysis showed that Europe served as a secondary distribution centre for the invasion of G. rostochiensis into all other continents (North America, Africa, Asia and Oceania).


Assuntos
Variação Genética , Repetições de Microssatélites , Solanum tuberosum , Tylenchoidea , Animais , Europa (Continente) , Solanum tuberosum/parasitologia , Tylenchoidea/genética , Espécies Introduzidas , Teorema de Bayes , Genótipo , Doenças das Plantas/parasitologia , Genética Populacional , América do Sul
7.
Sci Rep ; 14(1): 14913, 2024 06 28.
Artigo em Inglês | MEDLINE | ID: mdl-38942961

RESUMO

Β-glucans are polysaccharide macromolecules that can be found in the cell walls of molds, such as Rhizopus oryzae. They provide functional properties in food systems and have immunomodulatory activity, anticancer, and prebiotic effects; reduce triglycerides and cholesterol; and prevent obesity, among others benefits. Furthermore, potato starch production requires a large amount of water, which is usually discharged into the environment, creating problems in soils and bodies of water. The physical parameters to produce ß-glucans were determined, liquid waste from potato starch processing was used and native Rhizopus oryzae was isolated and identified from cereal grains. The isolates grew quickly on the three types of agars used at 25 °C and 37 °C, and they did not grow at 45 °C. Rhizopus oryzae M10A1 produced the greatest amount of ß-glucans after six days of culture at 30 °C, pH 6, a stirring rate of 150 rpm and a fermentation volume of 250 mL. By establishing the physical fermentation parameters and utilizing the liquid waste from potato starch, Rhizopus oryzae M10A1 yielded 397.50 mg/100 g of ß-glucan was obtained.


Assuntos
Fermentação , Rhizopus oryzae , Solanum tuberosum , Amido , beta-Glucanas , beta-Glucanas/metabolismo , Solanum tuberosum/microbiologia , Solanum tuberosum/metabolismo , Amido/metabolismo , Rhizopus oryzae/metabolismo , Concentração de Íons de Hidrogênio , Rhizopus/metabolismo , Temperatura
8.
Phytopathology ; 114(9): 2151-2161, 2024 Sep.
Artigo em Inglês | MEDLINE | ID: mdl-38888504

RESUMO

The evolution of new variants of plant pathogens is one of the biggest challenges to controlling and managing plant diseases. Of the forces driving these evolutionary processes, global migration events are particularly important for widely distributed diseases such as potato late blight, caused by the oomycete Phytophthora infestans. However, little is known about its migration routes outside North America and Europe. This work used genotypic data from population studies to elucidate the migration history originating the Colombian P. infestans population. For this purpose, a dataset of 1,706 P. infestans genotypes was recollected, representing North and South America, Europe, and Asia. Descriptive analysis and historical records from North America and Europe were used to propose three global migration hypotheses, differing on the origin of the disease (Mexico or Peru) and the hypothesis that it returned to South America from Europe. These scenarios were tested using approximate Bayesian computation. According to this analysis, the most probable scenario (posterior probability = 0.631) was the one proposing a Peruvian origin for P. infestans, an initial migration toward Colombia and Mexico, and a later event from Mexico to the United States and then to Europe and Asia, with no return to northern South America. In Colombia, the scenario considering a single migration from Peru and posterior migrations within Colombia was the most probable, with a posterior probability of 0.640. The obtained results support the hypothesis of a Peruvian origin for P. infestans followed by rare colonization events worldwide.


Assuntos
Phytophthora infestans , Doenças das Plantas , Phytophthora infestans/genética , Colômbia , Doenças das Plantas/microbiologia , Genótipo , Teorema de Bayes , Solanum tuberosum/microbiologia , Europa (Continente) , México , Ásia , América do Norte
9.
Int J Biol Macromol ; 272(Pt 2): 132907, 2024 Jun.
Artigo em Inglês | MEDLINE | ID: mdl-38862318

RESUMO

The aim of this study was to develop a star fruit extract (SFE) and incorporate it into aerogels based on native and phosphorylated potato starches. The phosphorylation of starch enhances its properties by incorporating phosphate groups that increase the spaces between starch molecules, resulting in a more resilient, intact aerogel with enhanced water absorption. The bioactive aerogels based on potato starch and 10, 15, and 20 % (w/w) of SFE were characterized by their morphological and thermogravimetric properties, infrared spectra, water absorption capacity, loading capacity, and antioxidant activity. Epicatechin was the major compound present in SFE. The thermal stability of SFE increased when incorporated into phosphorylated starch aerogels at a concentration of 20 %. The water absorption capacity was higher in phosphorylated starch aerogels (reaching 1577 %) than in their native counterparts (reaching 1100 %). Native starch aerogels with 15 and 20 % SFE exhibited higher antioxidant activity against hydroxyl free radicals compared to phosphorylated starch aerogels, achieving 79.9 % and 86.4 % inhibition for the hydroxyl and nitric oxide radicals, respectively. The ideal choice of freeze-dried aerogel depends on the desired effect, either to act as an antioxidant agent by releasing bioactive compounds from SFE or as a water-absorbent agent in food products.


Assuntos
Antioxidantes , Frutas , Géis , Extratos Vegetais , Solanum tuberosum , Amido , Solanum tuberosum/química , Géis/química , Extratos Vegetais/química , Extratos Vegetais/farmacologia , Amido/química , Fosforilação , Antioxidantes/química , Antioxidantes/farmacologia , Frutas/química , Averrhoa/química , Água/química
10.
Food Res Int ; 187: 114431, 2024 Jul.
Artigo em Inglês | MEDLINE | ID: mdl-38763681

RESUMO

Among the most consumed foods in the world is potato, which occupies the first place as a non-grain commodity, demonstrating the importance of its assessment concerning the population's food safety. In this study, the nutrients Ca, Mg, K, P, Cu, Mn, Fe, and Zn and the potentially toxic trace elements Cd, Cr, and Pb were evaluated considering their total contents, bioaccessible and bioavailable fractions in different potato cultivars, in an unpublished approach in the literature. The in vitro standard gastrointestinal digestion method (INFOGEST) and a model of the intestinal epithelial barrier using the Caco-2 cell line were applied for investigate the presence of metals in potato. For the macroelements, the bioaccessibility (% w/w) varied in the ranges: K (57-72 %), P (59-76 %), Mg (83-103 %), and Ca (30-123 %), whereas for the microelements were: Cu (27-74 %) and Mn (4.22-12.02, 60-119 %). The potentially of trace toxic elements, Cd and Pb, were found in 75 % of the samples, however, all the concentration values were below the maximum levels allowed of 0.10 µg/g. Chromium was determined only in potato peels and has no maximum established level. The bioaccessible and bioavailable fractions of Cd, Cr, and Pb were below the limits of quantification of the spectrometric methods (LOQ - µg/L: 0.063 Cd, 0.65 Cr, and 0.44 Pb). The potato samples were considered safe for consumption regarding the presence of potentially toxic trace elements, with a remarkable nutritional contribution.


Assuntos
Disponibilidade Biológica , Valor Nutritivo , Solanum tuberosum , Oligoelementos , Solanum tuberosum/química , Oligoelementos/análise , Células CACO-2 , Humanos , Digestão
11.
Vitae (Medellín) ; 31(1): 1-8, 2024-05-03. Ilustraciones
Artigo em Inglês | LILACS, COLNAL | ID: biblio-1538067

RESUMO

Background: Potato peel extract has demonstrated the ability to reduce platelet aggregation in vitro, suggesting its potential as a dietary intervention for preventing atherothrombotic disorders. Objective: This study aims to evaluate the impact of a potato peel-rich diet on platelet aggregation. Methods: A randomized, crossover-controlled, open two-period study was carried out with the participation of 12 healthy volunteers. Platelet aggregation was assessed before and after a seven-day dietary intervention. Participants consumed either a diet rich in potato peel (2 g/kg/d) or acetylsalicylic acid (ASA) as a reference (100 mg/d). Platelet aggregation percentages were measured following stimulation with arachidonic acid (AA, 150 µg/mL), adenosine diphosphate (ADP, 10 µM), and collagen (COL, 10 µg/mL). Results: The potato peel-rich diet resulted in a slight but significant reduction in platelet aggregation when stimulated with arachidonic acid compared to baseline values (85.0±2.0% vs. 91.3±1.7%, p<0.05). This effect was less pronounced than the reduction achieved with ASA (16±1.9%, p<0.001). Conclusion: The administration of a diet rich in potato peel reduces platelet aggregation induced by arachidonic acid, suggesting its potential role in the prevention of atherothrombotic disorders.


Introducción: El extracto de cáscara de patata ha demostrado su capacidad para reducir la agregación plaquetaria in vitro, lo que sugiere su potencial como intervención dietética para prevenir trastornos aterotrombóticos. Objetivo: Evaluar el impacto de una dieta rica en cáscara de patata en la agregación plaquetaria. Materiales y métodos: Se llevó a cabo un estudio aleatorizado, controlado, cruzado y abierto con la participación de 12 voluntarios sanos. Se evaluó la agregación plaquetaria antes y después de una intervención dietética de siete días. Los participantes consumieron una dieta rica en cáscara de patata (2 g/kg/d) o ácido acetilsalicílico (ASA) como referente (100 mg/d). Se midieron los porcentajes de agregación plaquetaria después de la estimulación con ácido araquidónico (AA, 150 µg/mL), difosfato de adenosina (ADP, 10 µM) y colágeno (COL, 10 µg/mL). Resultados: La dieta rica en cáscara de patata resultó en una ligera pero significativa reducción en la agregación plaquetaria cuando se estimuló con ácido araquidónico en comparación con los valores iniciales (85,0 ± 2,0% vs. 91,3 ± 1,7%, p <0,05). Este efecto fue menos pronunciado que la reducción lograda con ASA (16 ± 1,9%, p <0,001). Conclusión: La administración de una dieta rica en cáscara de patata reduce la agregación plaquetaria inducida por ácido araquidónico, lo que sugiere su papel potencial en la prevención de trastornos aterotrombóticos.


Assuntos
Humanos , Agregação Plaquetária , Solanum tuberosum , Ácido Clorogênico , Ácido Araquidônico , Dieta
12.
Appl Environ Microbiol ; 90(5): e0024224, 2024 05 21.
Artigo em Inglês | MEDLINE | ID: mdl-38690890

RESUMO

Ralstonia solanacearum species complex (RSSC) is a phytopathogenic bacterial group that causes bacterial wilt in several crops, being potato (Solanum tuberosum) one of the most important hosts. The relationship between the potato plant ionome (mineral and trace elements composition) and the resistance levels to this pathogen has not been addressed until now. Mineral content of xylem sap, roots, stems and leaves of potato genotypes with different levels of resistance to bacterial wilt was assessed in this work, revealing a positive correlation between divalent calcium (Ca) cation concentrations and genotype resistance. The aim of this study was to investigate the effect of Ca on bacterial wilt resistance, and on the growth and virulence of RSSC. Ca supplementation significantly decreased the growth rate of Ralstonia pseudosolanacearum GMI1000 in minimal medium and affected several virulence traits such as biofilm formation and twitching motility. We also incorporate for the first time the use of microfluidic chambers to follow the pathogen growth and biofilm formation in conditions mimicking the plant vascular system. By using this approach, a reduction in biofilm formation was observed when both, rich and minimal media, were supplemented with Ca. Assessment of the effect of Ca amendments on bacterial wilt progress in potato genotypes revealed a significant delay in disease progress, or a complete absence of wilting symptoms in the case of partially resistant genotypes. This work contributes to the understanding of Ca effect on virulence of this important pathogen and provides new strategies for an integrated control of bacterial wilt on potato. IMPORTANCE: Ralstonia solanacearum species complex (RSSC) includes a diverse group of bacterial strains that cause bacterial wilt. This disease is difficult to control due to pathogen aggressiveness, persistence, wide range of hosts, and wide geographic distribution in tropical, subtropical, and temperate regions. RSSC causes considerable losses depending on the pathogen strain, host, soil type, environmental conditions, and cultural practices. In potato, losses of $19 billion per year have been estimated for this pathogen worldwide. In this study, we report for the first time the mineral composition found in xylem sap and plant tissues of potato germplasm with different levels of resistance to bacterial wilt. This study underscores the crucial role of calcium (Ca) concentration in the xylem sap and stem in relation to the resistance of different genotypes. Our in vitro experiments provide evidence of Ca's inhibitory effect on the growth, biofilm formation, and twitching movement of the model RSSC strain R. pseudosolanacearum GMI1000. This study introduces a novel element, the Ca concentration, which should be included into the integrated disease control management strategies for bacterial wilt in potatoes.


Assuntos
Cálcio , Doenças das Plantas , Ralstonia solanacearum , Solanum tuberosum , Solanum tuberosum/microbiologia , Doenças das Plantas/microbiologia , Cálcio/metabolismo , Ralstonia solanacearum/fisiologia , Ralstonia solanacearum/genética , Ralstonia solanacearum/patogenicidade , Ralstonia solanacearum/crescimento & desenvolvimento , Virulência , Biofilmes/crescimento & desenvolvimento , Ralstonia/genética , Ralstonia/fisiologia , Raízes de Plantas/microbiologia , Xilema/microbiologia
13.
G3 (Bethesda) ; 14(6)2024 Jun 05.
Artigo em Inglês | MEDLINE | ID: mdl-38608140

RESUMO

Potato and its wild relatives are distributed mainly in the Mexican highlands and central Andes of South America. The South American A-genome species, including cultivated potatoes, are reproductively isolated from Mexican diploid species. Whole-genome sequencing has disclosed genome structure and similarity, mostly in cultivated potatoes and their closely related species. In this study, we generated a chromosome-scale assembly of the genome of a Mexican diploid species, Solanum bulbocastanum Dun., using PacBio long-read sequencing, optical mapping, and Hi-C scaffolding technologies. The final sequence assembly consisted of 737.9 Mb, among which 647.0 Mb were anchored to the 12 chromosomes. Compared with chromosome-scale assemblies of S. lycopersicum (tomato), S. etuberosum (non-tuber-bearing species with E-genome), S. verrucosum, S. chacoense, S. multidissectum, and S. phureja (all four are A-genome species), the S. bulbocastnum genome was the shortest. It contained fewer transposable elements (56.2%) than A-genome species. A cluster analysis was performed based on pairwise ratios of syntenic regions among the seven chromosome-scale assemblies, showing that the A-genome species were first clustered as a distinct group. Then, this group was clustered with S. bulbocastanum. Sequence similarity in 1,624 single-copy orthologous gene groups among 36 Solanum species and clones separated S. bulbocastanum as a specific group, including other Mexican diploid species, from the A-genome species. Therefore, the S. bulbocastanum genome differs in genome structure and gene sequences from the A-genome species. These findings provide important insights into understanding and utilizing the genetic diversity of S. bulbocastanum and the other Mexican diploid species in potato breeding.


Assuntos
Diploide , Genoma de Planta , Solanum , Solanum/genética , Solanum tuberosum/genética , Cromossomos de Plantas/genética , Anotação de Sequência Molecular , Genômica/métodos , Mapeamento Cromossômico , Filogenia , México
14.
Bioresour Technol ; 400: 130675, 2024 May.
Artigo em Inglês | MEDLINE | ID: mdl-38608786

RESUMO

In this article we can observe the scanning by the literature for the pretreatment of steam explosion applied to lignocellulose biomass. A comparison of the chemical and physical characterization of potato peel as a lignocellulose biomass. Besides, the innovative design of a continuous reactor for the potato peel steam explosion process is shown, with specific temperature and pressure conditions on a pilot scale, detailing its parts. Finally, a finite element analysis was performed where stress results were obtained from the reactor material, severity factor, structural analysis and thermal analysis, providing a panorama of the reactor's behavior with the conditions specific.


Assuntos
Solanum tuberosum , Vapor , Solanum tuberosum/química , Lignina/química , Desenho de Equipamento , Temperatura , Biomassa , Análise de Elementos Finitos , Pressão , Biotecnologia/métodos , Reatores Biológicos
15.
Plant Cell Rep ; 43(4): 85, 2024 Mar 07.
Artigo em Inglês | MEDLINE | ID: mdl-38453711

RESUMO

KEY MESSAGE: The shock produced by the allopolyploidization process on a potato interspecific diploid hybrid displays a non-random remobilization of the small RNAs profile on a variety of genomic features. Allopolyploidy, a complex process involving interspecific hybridization and whole genome duplication, significantly impacts plant evolution, leading to the emergence of novel phenotypes. Polyploids often present phenotypic nuances that enhance adaptability, enabling them to compete better and occasionally to colonize new habitats. Whole-genome duplication represents a genomic "shock" that can trigger genetic and epigenetic changes that yield novel expression patterns. In this work, we investigate the polyploidization effect on a diploid interspecific hybrid obtained through the cross between the cultivated potato Solanum tuberosum and the wild potato Solanum kurtzianum, by assessing the small RNAs (sRNAs) profile of the parental diploid hybrid and its derived allopolyploid. Small RNAs are key components of the epigenetic mechanisms involved in silencing by RNA-directed DNA Methylation (RdDM). A sRNA sequencing (sRNA-Seq) analysis was performed to individually profile the 21 to 22 nucleotide (21 to 22-nt) and 24-nt sRNA size classes due to their unique mechanism of biogenesis and mode of function. The composition and distribution of different genomic features and differentially accumulated (DA) sRNAs were evaluated throughout the potato genome. We selected a subset of genes associated with DA sRNAs for messenger RNA (mRNA) expression analysis to assess potential impacts on the transcriptome. Interestingly, we noted that 24-nt DA sRNAs that exclusively mapped to exons were correlated with differentially expressed mRNAs between genotypes, while this behavior was not observed when 24-nt DA sRNAs were mapped to intronic regions. These findings collectively emphasize the nonstochastic nature of sRNA remobilization in response to the genomic shock induced by allopolyploidization.


Assuntos
Pequeno RNA não Traduzido , Solanum tuberosum , Solanum tuberosum/genética , Diploide , Genoma , Genômica , RNA Mensageiro , Pequeno RNA não Traduzido/genética
16.
Braz J Biol ; 84: e278272, 2024.
Artigo em Inglês | MEDLINE | ID: mdl-38511778

RESUMO

The development of potato plants during the cultivation of two crops occurs in a short period. At the same time, field conditions change and do not repeat over time. The formation of the crop during the cultivation of two crops in the Moscow region turns out to be in different growing conditions: the first crop falls on a long day and moderate temperatures, as well as sometimes returning frosts, the second crop falls on a short day and high temperatures, as well as a lack of moisture. The purpose of our research was to substantiate the choice of varieties for cultivation of two crops. Its solution is possible with a certain guaranteed efficiency based on the theory of statistical games. The research was carried out at the Vegetable Experimental Station of the Moscow State Agrarian University named after K.A. Timiryazev and at the Central Experimental Station of the Barybino Research Institute of Agrochemistry of the Moscow Region 2017-2022. The experiment was laid by the method of random placement of plots, the predecessor was a bow. The planting density is 47.6 thousand plants per 1 ha. Germinated tubers were used for planting during the first planting of a large fraction, during the second planting of an average fraction. The second landing was carried out on the vacant place after cleaning the first landing. The cultivation technology is standard. Cleaning was carried out in mid-July and at the end of September. Statistical game theory was used to determine the choice of a variety with a certain guaranteed efficiency. As a result of forecasting in critical climatic conditions, it is necessary to plant 1 crop - varieties Riviera and for 2 crops - varieties Luck.


Assuntos
Solanum tuberosum , Humanos , Verduras , Produtos Agrícolas , Temperatura , Federação Russa
17.
Sci Rep ; 14(1): 3963, 2024 02 17.
Artigo em Inglês | MEDLINE | ID: mdl-38368478

RESUMO

The soil microbiome, a crucial component of agricultural ecosystems, plays a pivotal role in crop production and ecosystem functioning. However, its response to traditional tillage systems in potato cultivation in the Peruvian highlands is still far from understood. Here, ecological and functional aspects of the bacterial community were analyzed based on soil samples from two traditional tillage systems: 'chiwa' (minimal tillage) and 'barbecho' (full tillage), in the Huanuco region of the Peruvian central Andes. Similar soil bacterial community composition was shown for minimal tillage system, but it was heterogeneous for full tillage system. This soil bacterial community composition under full tillage system may be attributed to stochastic, and a more dynamic environment within this tillage system. 'Chiwa' and 'barbecho' soils harbored distinct bacterial genera into their communities, indicating their potential as bioindicators of traditional tillage effects. Functional analysis revealed common metabolic pathways in both tillage systems, with differences in anaerobic pathways in 'chiwa' and more diverse pathways in 'barbecho'. These findings open the possibilities to explore microbial bioindicators for minimal and full tillage systems, which are in relationship with healthy soil, and they can be used to propose adequate tillage systems for the sowing of potatoes in Peru.


Assuntos
Microbiota , Solanum tuberosum , Solo , Peru , Biomarcadores Ambientais , Microbiologia do Solo , Agricultura , Bactérias
18.
J Appl Microbiol ; 135(3)2024 Mar 01.
Artigo em Inglês | MEDLINE | ID: mdl-38373804

RESUMO

AIM: An extensive survey was done to clarify the prevalent Stemphylium species on Solanaceae plants across Brazil, and their host ranges. METHODS AND RESULTS: Eighty nine (89) Stemphylium isolates were obtained from naturally infected tomatoes as well as S. paniculatum, potato, eggplant, scarlet eggplant (Solanum aethiopicum var. gilo), Physalis angulata, and Capsicum species. Phylogenetic analyses encompassing the ITS-5.8S rDNA and glyceraldehyde-3-phosphate dehydrogenase genomic regions placed the isolates into two distinct groupings with either Stemphylium lycopersici or S. solani. Isolates of S. lycopersici (n = 81) were obtained infecting tomato, potato, eggplant, S. paniculatum, and P. angulata. Isolates of S. solani (n = 8) were detected in natural association with scarlet eggplant and tomato. Two isolates of S. lycopersici displayed a wide experimental host range in greenhouse bioassays, infecting accessions of 12 out of 18 species. Ocimum basilicum (Lamiaceae) was the only experimental host outside the Solanaceae family.


Assuntos
Capsicum , Fungos Mitospóricos , Solanum lycopersicum , Solanum tuberosum , Brasil , Filogenia , Verduras
19.
Int J Biol Macromol ; 263(Pt 1): 130165, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38367784

RESUMO

This work reports on the extraction and characterization of the behavior of starch from residues of several potato varieties (Criolla, Sabanera and Pastusa) of Colombian origin from the Andean region using different techniques and the evaluation of the effect of citric acid (CA) on the grain morphology. Additionally, films were produced with each one of the extracted starches and glycerol. Pastusa variety starch shows a higher granule size than the other varieties and Pastusa starch shows lower amylose content compared to Sabanera and Criolla. Criolla and Pastusa starches exhibit more thermal stability than Sabanera starch. Starch-glycerol films were also produced using the cast solving method. The films were mechanically analyzed by tensile test and the barrier properties were assessed by water vapor permeability (WVP). The tensile strength of the films varied in the 2.0-2.4 MPa range, while the elongation at break was comprised between 25 and 32 %. With regard to water vapor permeability, the obtained values fall within the 4-7 × 10-10 g m-1 s-1 Pa-1 range. It was observed that the thickness of the films and the protein content affected water vapor permeability, increasing this value at higher levels of thickness.


Assuntos
Filmes Comestíveis , Solanum tuberosum , Amido/química , Solanum tuberosum/química , Vapor , Glicerol/química , Colômbia , Permeabilidade , Resistência à Tração
20.
Int J Biol Macromol ; 263(Pt 2): 130370, 2024 Apr.
Artigo em Inglês | MEDLINE | ID: mdl-38403222

RESUMO

Dry heat treatment (DHT) has been demonstrated as a viable method for starch modification, offering benefits due to its environmentally friendly process and low operational costs. This research modified potato starch using different DHT conditions (continuous-CDHT and cyclic-RDHT), with durations ranging from 3 to 15 h and 1 to 5 cycles, at 120 °C. The study investigated and compared the structural, thermal, pasting, and morphological properties of the treated samples to those of untreated potato starch, including in vitro digestibility post-modification. DHT altered the amylose content of the biopolymer. X-ray diffraction patterns transitioned from type B to type C, and a decrease in relative crystallinity (RC%) was observed. Morphological changes were more pronounced in starches modified by RDHT. Paste viscosities of both CDHT and RDHT-treated starches decreased significantly, by 61.7 % and 58.1 % respectively, compared to native starch. The gelatinization enthalpy of RDHT-treated starches reduced notably, from 17.60 to 16.10 J g-1. Additionally, starch digestibility was impacted, with cyclic treatments yielding a significant increase in resistant starch content, notably an 18.26 % rise. These findings underscore the efficacy of dry heat in enhancing the functional properties of potato starch.


Assuntos
Solanum tuberosum , Solanum tuberosum/química , Temperatura Alta , Amido/química , Amilose/química , Viscosidade , Difração de Raios X
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